[Ref.: #1698] |
Sample type/isolated from |
child's throat |
|
[Ref.: #46134] |
Sample type/isolated from |
Human throat,child |
|
[Ref.: #67770] |
Sample type/isolated from |
Child's throat |
* marker position based on {}
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Isolation sources categories |
#Infection |
#Patient |
- |
#Host Body-Site |
#Oral cavity and airways |
#Throat |
#Host |
#Human |
#Child |
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 |
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Information on genomic background e.g. entries in nucleic sequence databass
Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #20218] |
Enterobacter sakazakii strain ATCC 29544 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AY702093 |
694 |
|
28141 tax ID |
* |
[Ref.: #20218] |
Enterobacter sakazakii strain ATCC 29544 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AY748356 |
683 |
|
28141 tax ID |
* |
[Ref.: #20218] |
Enterobacter sakazakii strain ATCC 29544 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AY748357 |
608 |
|
28141 tax ID |
* |
[Ref.: #20218] |
Cronobacter sakazakii strain E601 16S ribosomal RNA gene, partial sequence |
EF059843 |
1424 |
|
28141 tax ID |
* |
[Ref.: #20218] |
Enterobacter sakazakii strain ATCC 29544 16S ribosomal RNA gene, partial sequence |
EF088379 |
1493 |
|
28141 tax ID |
* |
[Ref.: #20218] |
Cronobacter sakazakii strain ATCC 29544 16S ribosomal RNA gene, partial sequence |
HQ880288 |
1425 |
|
28141 tax ID |
* |
[Ref.: #20218] |
Cronobacter sakazakii strain ATCC 29544 16S ribosomal RNA gene, partial sequence |
JN654454 |
797 |
|
28141 tax ID |
* |
[Ref.: #20218] |
Cronobacter sakazakii strain ATCC 29544 16S ribosomal RNA gene, partial sequence |
JX133166 |
1438 |
|
28141 tax ID |
* |
[Ref.: #20218] |
Enterobacter sakazakii strain z858 16S ribosomal RNA gene, partial sequence |
AY752936 |
1451 |
|
28141 tax ID |
* |
[Ref.: #20218] |
Enterobacter sakazakii gene for 16S ribosomal RNA, partial sequence |
AB004746 |
1449 |
|
28141 tax ID |
* |
[Ref.: #20218] |
Cronobacter sakazakii gene for 16S rRNA, partial sequence, strain: JCM 1233 |
AB626126 |
1464 |
|
28141 tax ID |
* |
[Ref.: #20218] |
Cronobacter sakazakii gene for 16S rRNA, partial sequence, strain: NBRC 102416 |
AB681772 |
1467 |
|
28141 tax ID |
* |
[Ref.: #20218] |
Enterobacter sakazakii strain NCTC 11467 16S ribosomal RNA gene, partial sequence |
AY579145 |
528 |
|
28141 tax ID |
* |
|
[Ref.: #67770] |
GC-content |
57 mol% |
thermal denaturation, midpoint method (Tm) |
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Availability in culture collections
External links
[Ref.: #1698] |
Culture collection no. |
DSM 4485, ATCC 29544, NCTC 11467, WDCM 00214, CCUG 14558, CECT 858, CDC 4562-70, JCM 1233, BCRC 13988, CGMCC 1.6765, CIP 103183, HUT 8109, IAM 12660, KCTC 2949, LMG 5740, NBRC 102416, NBRC 105698, VTT E-991283 |
[Ref.: #20218] |
Associated Passport(s) in StrainInfo |
150549, 9127, 9134 |
|
Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Phylogeny |
Chemotaxis and Shorter O-Antigen Chain Length Contribute to the Strong Desiccation Tolerance of a Food-Isolated Cronobacter sakazakii Strain. |
Qian C, Huang M, Du Y, Song J, Mu H, Wei Y, Zhang S, Yin Z, Yuan C, Liu B, Liu B |
Front Microbiol |
10.3389/fmicb.2021.779538 |
2022 |
* |
Biotechnology |
Why Does Cronobacter sakazakii Survive for a Long Time in Dry Environments? Contribution of the Glass Transition of Dried Bacterial Cells. |
Lee K, Koyama K, Kawai K, Koseki S |
Microbiol Spectr |
10.1128/spectrum.01384-21 |
2021 |
* |
Phenotype |
Alterations in the Transcriptional Landscape Allow Differential Desiccation Tolerance in Clinical Cronobacter sakazakii. |
Cao Y, Dever K, Sivasankaran SK, Nguyen SV, Macori G, Naithani A, Gopinath GR, Tall B, Lehner A, Stephan R, Srikumar S, Fanning S |
Appl Environ Microbiol |
10.1128/AEM.00830-21 |
2021 |
* |
Biotechnology |
Effect of 405-nm light-emitting diode on environmental tolerance of Cronobacter sakazakii in powdered infant formula. |
Zheng Z, Xie Y, Ma S, Tu J, Li J, Liang S, Xu Y, Shi C |
Food Res Int |
10.1016/j.foodres.2021.110343 |
2021 |
* |
Pathogenicity |
Effect of low doses of biocides on the antimicrobial resistance and the biofilms of Cronobacter sakazakii and Yersinia enterocolitica. |
Capita R, Vicente-Velasco M, Rodriguez-Melcon C, Garcia-Fernandez C, Carballo J, Alonso-Calleja C |
Sci Rep |
10.1038/s41598-019-51907-1 |
2019 |
* |
Metabolism |
Comparative proteomic analysis of Cronobacter sakazakii by iTRAQ provides insights into response to desiccation. |
Hu S, Yu Y, Wu X, Xia X, Xiao X, Wu H |
Food Res Int |
10.1016/j.foodres.2017.06.051 |
2017 |
* |
Metabolism |
Characterization of an antimicrobial substance produced by Lactobacillus plantarum NTU 102. |
Lin TH, Pan TM |
J Microbiol Immunol Infect |
10.1016/j.jmii.2017.08.003 |
2017 |
* |
Enzymology |
Ca(2+) in Hybridization Solutions for Fluorescence in situ Hybridization Facilitates the Detection of Enterobacteriaceae. |
Haruta S, Iino T, Ohkuma M, Suzuki KI, Igarashi Y |
Microbes Environ |
10.1264/jsme2.ME16186 |
2017 |
* |
Pathogenicity |
Short communication: Effects of vacuum freeze-drying on inactivation of Cronobacter sakazakii ATCC29544 in liquid media with different initial inoculum levels. |
Jiao R, Gao J, Zhang X, Zhang M, Chen J, Wu Q, Zhang J, Ye Y |
J Dairy Sci |
10.3168/jds.2016-11937 |
2017 |
* |
Genetics |
The complete genome sequence of Cronobacter sakazakii ATCC 29544(T), a food-borne pathogen, isolated from a child's throat. |
Kim S, Kim YT, Yoon H, Lee JH, Ryu S |
Gut Pathog |
10.1186/s13099-016-0150-0 |
2017 |
* |
Pathogenicity |
Influence of sweet whey protein concentrate and its hydrolysates on host-pathogen interactions in the emerging foodborne pathogen Cronobacter sakazakii. |
McEvoy K, Hayes J, Kealey C, Brady D |
J Appl Microbiol |
10.1111/jam.13212 |
2016 |
* |
Pathogenicity |
Evaluation of probiotic properties of Lactobacillus plantarum WLPL04 isolated from human breast milk. |
Jiang M, Zhang F, Wan C, Xiong Y, Shah NP, Wei H, Tao X |
J Dairy Sci |
10.3168/jds.2015-10434 |
2016 |
* |
Enzymology |
Development of Bioluminescent Cronobacter sakazakii ATCC 29544 in a Mouse Model. |
Wang X, Li Z, Dong X, Chi H, Wang G, Li J, Sun R, Chen M, Zhang X, Wang Y, Qu H, Sun Y, Xia Z, Li Q |
J Food Prot |
10.4315/0362-028X.JFP-14-482 |
2015 |
* |
Stress |
Hfq plays important roles in virulence and stress adaptation in Cronobacter sakazakii ATCC 29544. |
Kim S, Hwang H, Kim KP, Yoon H, Kang DH, Ryu S |
Infect Immun |
10.1128/IAI.03161-14 |
2015 |
* |
Metabolism |
Plasmid-encoded MCP is involved in virulence, motility, and biofilm formation of Cronobacter sakazakii ATCC 29544. |
Choi Y, Kim S, Hwang H, Kim KP, Kang DH, Ryu S |
Infect Immun |
10.1128/IAI.02633-14 |
2014 |
* |
Phylogeny |
Development of a rapid detection system for opportunistic pathogenic Cronobacter spp. in powdered milk products. |
Zimmermann J, Schmidt H, Loessner MJ, Weiss A |
Food Microbiol |
10.1016/j.fm.2014.02.010 |
2014 |
* |
Metabolism |
Putative Inv is essential for basolateral invasion of Caco-2 cells and acts synergistically with OmpA to affect in vitro and in vivo virulence of Cronobacter sakazakii ATCC 29544. |
Chandrapala D, Kim K, Choi Y, Senevirathne A, Kang DH, Ryu S, Kim KP |
Infect Immun |
10.1128/IAI.01397-13 |
2014 |
* |
Biotechnology |
Development of a PCR assay for rapid detection of Cronobacter spp. from food. |
Chen W, Ai L, Yang J, Ren J, Li Y, Guo B |
Can J Microbiol |
10.1139/cjm-2013-0243 |
2013 |
* |
Metabolism |
Effect of heat shock on the fatty acid and protein profiles of Cronobacter sakazakii BCRC 13988 as well as its growth and survival in the presence of various carbon, nitrogen sources and disinfectants. |
Li PT, Hsiao WL, Yu RC, Chou CC |
Food Microbiol |
10.1016/j.fm.2013.04.018 |
2013 |
* |
Enzymology |
Sequencing of the grxB gene of Cronobacter spp. and the development of a PCR assay for its identification. |
Dong X, Wu Q, Zhang J, Mo S, Kou X, Guo W |
Foodborne Pathog Dis |
10.1089/fpd.2012.1431 |
2013 |
* |
Phylogeny |
Evaluation and implementation of a membrane filter method for Cronobacter detection in drinking water. |
Liu H, Yang Y, Cui J, Liu L, Liu H, Hu G, Shi Y, Li J |
FEMS Microbiol Lett |
10.1111/1574-6968.12155 |
2013 |
* |
Stress |
Effect of ethanol shock pretreatment on the tolerance of Cronobacter sakazakii BCRC 13988 exposed to subsequent lethal stresses. |
Huang YT, Cheng KC, Yu RC, Chou CC |
Foodborne Pathog Dis |
10.1089/fpd.2012.1291 |
2013 |
* |
Metabolism |
Possible roles of LysR-type transcriptional regulator (LTTR) homolog as a global regulator in Cronobacter sakazakii ATCC 29544. |
Choi Y, Kim KP, Kim K, Choi J, Shin H, Kang DH, Ryu S |
Int J Med Microbiol |
10.1016/j.ijmm.2012.06.001 |
2012 |
* |
Stress |
Development of resistance in Cronobacter sakazakii ATCC 29544 to thermal and nonthermal processes after exposure to stressing environmental conditions. |
Arroyo C, Cebrian G, Condon S, Pagan R |
J Appl Microbiol |
10.1111/j.1365-2672.2011.05218.x |
2012 |
* |
Pathogenicity |
In vitro evaluation of Lactobacillus gasseri strains of infant origin on adhesion and aggregation of specific pathogens. |
Ferreira CL, Grzeskowiak L, Collado MC, Salminen S |
J Food Prot |
10.4315/0362-028X.JFP-11-074 |
2011 |
* |
Enzymology |
Analysis of the DNA region mediating increased thermotolerance at 58 degrees C in Cronobacter sp. and other enterobacterial strains. |
Gajdosova J, Benedikovicova K, Kamodyova N, Tothova L, Kaclikova E, Stuchlik S, Turna J, Drahovska H |
Antonie Van Leeuwenhoek |
10.1007/s10482-011-9585-y |
2011 |
* |
Pathogenicity |
Survival characteristics of environmental and clinically derived strains of Cronobacter sakazakii in infant milk formula (IMF) and ingredients. |
Walsh D, Molloy C, Iversen C, Carroll J, Cagney C, Fanning S, Duffy G |
J Appl Microbiol |
10.1111/j.1365-2672.2010.04921.x |
2011 |
* |
Pathogenicity |
Synergistic effects of sodium hypochlorite and ultraviolet radiation in reducing the levels of selected foodborne pathogenic bacteria. |
Ha JH, Ha SD |
Foodborne Pathog Dis |
10.1089/fpd.2010.0761 |
2011 |
* |
Biotechnology |
Inactivation of Cronobacter sakazakii by ultrasonic waves under pressure in buffer and foods. |
Arroyo C, Cebrian G, Pagan R, Condon S |
Int J Food Microbiol |
10.1016/j.ijfoodmicro.2010.10.033 |
2010 |
* |
Stress |
Sub-lethal heat treatment affects the tolerance of Cronobacter sakazakii BCRC 13988 to various organic acids, simulated gastric juice and bile solution. |
Hsiao WL, Ho WL, Chou CC |
Int J Food Microbiol |
10.1016/j.ijfoodmicro.2010.10.006 |
2010 |
* |
Biotechnology |
Factors influencing the accuracy of the plating method used to enumerate low numbers of viable micro-organisms in food. |
Jongenburger I, Reij MW, Boer EP, Gorris LG, Zwietering MH |
Int J Food Microbiol |
10.1016/j.ijfoodmicro.2010.07.025 |
2010 |
* |
Genetics |
Structure of the O-polysaccharide of Cronobacter sakazakii O1 containing 3-(N-acetyl-l-alanyl)amino-3,6-dideoxy-d-glucose. |
Arbatsky NP, Wang M, Shashkov AS, Feng L, Knirel YA, Wang L |
Carbohydr Res |
10.1016/j.carres.2010.07.013 |
2010 |
* |
Biotechnology |
Inactivation rates of Cronobacter spp. and selected other bacterial strains in powdered infant formulae stored at different temperatures. |
Kandhai MC, Reij MW, van Schothorst M, Gorris LG, Zwietering MH |
J Food Prot |
10.4315/0362-028x-73.5.839 |
2010 |
* |
Pathogenicity |
Synergistic effects of ethanol and UV radiation to reduce levels of selected foodborne pathogenic bacteria. |
Ha JH, Ha SD |
J Food Prot |
10.4315/0362-028x-73.3.556 |
2010 |
* |
Biotechnology |
The effect of heat shock on the response of Cronobacter sakazakii to subsequent lethal stresses. |
Chang CH, Chiang ML, Chou CC |
Foodborne Pathog Dis |
10.1089/fpd.2009.0345 |
2010 |
* |
Biotechnology |
The effect of temperature and length of heat shock treatment on the thermal tolerance and cell leakage of Cronobacter sakazakii BCRC 13988. |
Chang CH, Chiang ML, Chou CC |
Int J Food Microbiol |
10.1016/j.ijfoodmicro.2009.06.005 |
2009 |
* |
Phylogeny |
[Development of a loop-mediated isothermal amplification assay for rapid detection of Enterobacter sakazakii in powdered infant formula]. |
Hu L, Zhang W, Zhang X, Yuan Y, Zhang Y, Zhang H, Ma X, Su X |
Wei Sheng Wu Xue Bao |
|
2009 |
* |
Phylogeny |
Analysis of a consensus fragment in ERIC-PCR fingerprinting of Enterobacter sakazakii. |
Ye Y, Wu Q, Yao L, Dong X, Wu K, Zhang J |
Int J Food Microbiol |
10.1016/j.ijfoodmicro.2009.03.018 |
2009 |
* |
Phylogeny |
Cronobacter gen. nov., a new genus to accommodate the biogroups of Enterobacter sakazakii, and proposal of Cronobacter sakazakii gen. nov., comb. nov., Cronobacter malonaticus sp. nov., Cronobacter turicensis sp. nov., Cronobacter muytjensii sp. nov., Cronobacter dublinensis sp. nov., Cronobacter genomospecies 1, and of three subspecies, Cronobacter dublinensis subsp. dublinensis subsp. nov., Cronobacter dublinensis subsp. lausannensis subsp. nov. and Cronobacter dublinensis subsp. lactaridi subsp. nov. |
Iversen C, Mullane N, McCardell B, Tall BD, Lehner A, Fanning S, Stephan R, Joosten H |
Int J Syst Evol Microbiol |
10.1099/ijs.0.65577-0 |
2008 |
* |
Phylogeny |
Characterization of the gene encoding the 16S rRNA of Enterobacter sakazakii and development of a species-specific PCR method. |
Hassan AA, Akineden O, Kress C, Estuningsih S, Schneider E, Usleber E |
Int J Food Microbiol |
10.1016/j.ijfoodmicro.2006.12.011 |
2007 |
* |
Biotechnology |
Exopolysaccharides produced by probiotic strains modify the adhesion of probiotics and enteropathogens to human intestinal mucus. |
Ruas-Madiedo P, Gueimonde M, Margolles A, de los Reyes-Gavilan CG, Salminen S |
J Food Prot |
10.4315/0362-028x-69.8.2011 |
2006 |
* |
Pathogenicity |
Adhesion of selected Bifidobacterium strains to human intestinal mucus and the role of adhesion in enteropathogen exclusion. |
Collado MC, Gueimonde M, Hernandez M, Sanz Y, Salminen S |
J Food Prot |
10.4315/0362-028x-68.12.2672 |
2005 |
* |
|
Cronobacter sakazakii ATCC 29544 Translocated Human Brain Microvascular Endothelial Cells via Endocytosis, Apoptosis Induction, and Disruption of Tight Junction. |
Jin T, Guan N, Du Y, Zhang X, Li J, Xia X |
Front Microbiol |
10.3389/fmicb.2021.675020 |
2021 |
* |
|
Optimization of UV-C Processing of Donkey Milk: An Alternative to Pasteurization? |
Papademas P, Mousikos P, Aspri M |
Animals (Basel) |
10.3390/ani11010042 |
2020 |
* |
|
Lactobacillus spp. inhibit the growth of Cronobacter sakazakii ATCC 29544 by altering its membrane integrity. |
Campana R, Federici S, Ciandrini E, Manti A, Baffone W |
J Food Sci Technol |
10.1007/s13197-019-03928-x |
2019 |
* |
|
Evaluation of Methods for Inoculating Dry Powder Foods with Salmonella enterica, Enterococcus faecium, or Cronobacter sakazakii. |
Wiertzema JR, Borchardt C, Beckstrom AK, Dev K, Chen P, Chen C, Vickers Z, Feirtag J, Lee L, Ruan R, Baumler DJ |
J Food Prot |
10.4315/0362-028X.JFP-18-284 |
2019 |
* |
|
Chemical Compositions of the Volatile Oils and Antibacterial Screening of Solvent Extract from Downy Lavender. |
Park CH, Park YE, Yeo HJ, Chun SW, Baskar TB, Lim SS, Park SU |
Foods |
10.3390/foods8040132 |
2019 |
* |
|
Cellular Injuries in Cronobacter sakazakii CIP 103183T and Salmonella enterica Exposed to Drying and Subsequent Heat Treatment in Milk Powder. |
Lang E, Guyot S, Peltier C, Alvarez-Martin P, Perrier-Cornet JM, Gervais P |
Front Microbiol |
10.3389/fmicb.2018.00475 |
2018 |
* |
|
Corrigendum: Thymoquinone Inhibits Virulence Related Traits of Cronobacter sakazakii ATCC 29544 and Has Anti-biofilm Formation Potential. |
Shi C, Yan C, Sui Y, Sun Y, Guo D, Chen Y, Jin T, Peng X, Ma L, Xia X |
Front Microbiol |
10.3389/fmicb.2018.00290 |
2018 |
* |
|
Thymoquinone Inhibits Virulence Related Traits of Cronobacter sakazakii ATCC 29544 and Has Anti-biofilm Formation Potential. |
Shi C, Yan C, Sui Y, Sun Y, Guo D, Chen Y, Jin T, Peng X, Ma L, Xia X |
Front Microbiol |
10.3389/fmicb.2017.02220 |
2017 |
* |
|
Cronobacter sakazakii ATCC 29544 Autoaggregation Requires FliC Flagellation, Not Motility. |
Hoeflinger JL, Miller MJ |
Front Microbiol |
10.3389/fmicb.2017.00301 |
2017 |
* |
|
Strain-specific probiotic properties of lactic acid bacteria and their interference with human intestinal pathogens invasion. |
Campana R, van Hemert S, Baffone W |
Gut Pathog |
10.1186/s13099-017-0162-4 |
2017 |
* |
|
References
-
#1698 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 4485
|
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-
-
#41818 |
; Curators of the CIP;
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-
#46134 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 14558
|
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-
#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
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-
#68368 |
Automatically annotated from API 20E .
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#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
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- * These data were automatically processed and therefore are not curated
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