Thorsellia anophelis (DSM 18579, CCUG 49520, CIP 108754)

Name: Thorsellia anophelis (DSM 18579, CCUG 49520, CIP 108754)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5235

Type strain

Culture col. no. DSM 18579 CCUG 49520 CIP 108754

NCBI tax ID(s) 1123402 336804

Special Collections DSMZ CCUG CIP Literature strains

History DSMZ <- CIP <- P. Kämpfer, Univ. Giessen <- J. Lindh, Univ. Stockholm CIP <- 2005, P. Kämpfer, Giessen Univ., Giessen, Germany <- J. Lindh, Stockholm Univ., Stockholm, Sweden: strain 49520

Links

Thorsellia anophelis DSM 18579 is an aerobe, Gram-negative, motile bacterium that was isolated from stomach of Anopheles gambiae.

Gram-negative motile rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 289986

CCUG 49520,CIP 108754,DSM 18579

@ref 20215

Last LPSN update 2026-05-29 08:26:07

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order [Gammaproteobacteria, not assigned to order]

Family Thorselliaceae

Genus Thorsellia

Species Thorsellia anophelis

Full scientific name Thorsellia anophelis Kämpfer et al. 2006

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
31664	negative	rod-shaped
116400	negative	rod-shaped
125438	negative		97.833

Colony morphology

@ref	Incubation period	Hemolysis ability
58594	2 days
116400		0

Pigmentation

31664

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
7537	TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545)	Medium recipe at MediaDive	Name: TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545) Composition: Casein peptone 17.0 g/l NaCl 5.0 g/l Soy peptone 3.0 g/l D(+)-Glucose 2.5 g/l K2HPO4 2.5 g/l Distilled water
32802	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
116400	CIP Medium 72	Medium recipe at CIP
7537	LB (Luria-Bertani) MEDIUM (DSMZ Medium 381)	Medium recipe at MediaDive	Name: LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) Composition: Agar 20.0 g/l NaCl 10.0 g/l Tryptone 10.0 g/l Yeast extract 5.0 g/l Distilled water
7537	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
7537	positive	growth	30
7537	positive	growth	37
31664	positive	growth	15-45
31664	positive	optimum	30
32802	positive	growth	37
58594	positive	growth	37

Culture pH

@ref	Ability	Type	PH
31664	positive	optimum	7
31664	positive	growth	7

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
31664	aerobe
58594	aerobe
116400	facultative anaerobe
125439	obligate aerobe	98.467

Spore formation

@ref	Spore formation	Confidence
31664
125438		93.227
125439		97.77

Observation

31664

Observationaggregates in chains

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31664	37054 ChEBI	3-hydroxybutyrate	+	carbon source
31664	17128 ChEBI	adipate	+	carbon source
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68368	27613 ChEBI	amygdalin	+	fermentation	from API 20E
68374	29016 ChEBI	arginine	-	hydrolysis	from API ID32E
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
68374	17057 ChEBI	cellobiose	-	builds acid from	from API ID32E
68368	16947 ChEBI	citrate	-	assimilation	from API 20E
68374	18333 ChEBI	D-arabitol	-	builds acid from	from API ID32E
68377	15824 ChEBI	D-fructose	+	builds acid from	from API NH
68374	18024 ChEBI	D-galacturonic acid	-	builds acid from	from API ID32E
68377	17634 ChEBI	D-glucose	+	builds acid from	from API NH
68374	17634 ChEBI	D-glucose	-	builds acid from	from API ID32E
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	+	fermentation	from API 20NE
68368	17634 ChEBI	D-glucose	+	fermentation	from API 20E
68374	16899 ChEBI	D-mannitol	-	builds acid from	from API ID32E
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68368	16899 ChEBI	D-mannitol	-	fermentation	from API 20E
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
31664	4853 ChEBI	esculin	+	hydrolysis
68369	4853 ChEBI	esculin	+	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
31664	24265 ChEBI	gluconate	+	carbon source
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
31664	17234 ChEBI	glucose	+	carbon source
68374	30849 ChEBI	L-arabinose	-	builds acid from	from API ID32E
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68368	30849 ChEBI	L-arabinose	-	fermentation	from API 20E
68374	18403 ChEBI	L-arabitol	+	builds acid from	from API ID32E
68374	62345 ChEBI	L-rhamnose	-	builds acid from	from API ID32E
68368	62345 ChEBI	L-rhamnose	-	fermentation	from API 20E
31664	24996 ChEBI	lactate	+	carbon source
68374	25094 ChEBI	lysine	-	degradation	from API ID32E
68368	25094 ChEBI	lysine	-	degradation	from API 20E
31664	25115 ChEBI	malate	+	carbon source
68369	25115 ChEBI	malate	-	assimilation	from API 20NE
68374	15792 ChEBI	malonate	-	assimilation	from API ID32E
68377	17306 ChEBI	maltose	+	builds acid from	from API NH
68374	17306 ChEBI	maltose	+	builds acid from	from API ID32E
68369	17306 ChEBI	maltose	+	assimilation	from API 20NE
31664	29864 ChEBI	mannitol	+	carbon source
68368	28053 ChEBI	melibiose	-	fermentation	from API 20E
68374	17268 ChEBI	myo-inositol	-	builds acid from	from API ID32E
68368	17268 ChEBI	myo-inositol	-	fermentation	from API 20E
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
116400	17632 ChEBI	nitrate	-	reduction
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
116400	16301 ChEBI	nitrite	-	reduction
68377	18257 ChEBI	ornithine	-	degradation	from API NH
68374	18257 ChEBI	ornithine	-	degradation	from API ID32E
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
68374	18394 ChEBI	palatinose	-	builds acid from	from API ID32E
68374	0 ChEBI	Potassium 5-ketogluconate	-	builds acid from	from API ID32E
31664	17272 ChEBI	propionate	+	carbon source
68374	15963 ChEBI	ribitol	+	builds acid from	from API ID32E
68374	30911 ChEBI	sorbitol	-	builds acid from	from API ID32E
68368	30911 ChEBI	sorbitol	-	fermentation	from API 20E
31664	17992 ChEBI	sucrose	+	carbon source
68377	17992 ChEBI	sucrose	+	builds acid from	from API NH
68374	17992 ChEBI	sucrose	-	builds acid from	from API ID32E
68368	17992 ChEBI	sucrose	+	fermentation	from API 20E
31664	27082 ChEBI	trehalose	+	carbon source
68374	27082 ChEBI	trehalose	+	builds acid from	from API ID32E
68377	27897 ChEBI	tryptophan	-	energy source	from API NH
68374	27897 ChEBI	tryptophan	-	energy source	from API ID32E
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68377	16199 ChEBI	urea	-	hydrolysis	from API NH
68374	16199 ChEBI	urea	-	hydrolysis	from API ID32E
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE
68368	16199 ChEBI	urea	-	hydrolysis	from API 20E
31664	18222 ChEBI	xylose	+	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68377	35581 ChEBI	indole	from API NH
68369	35581 ChEBI	indole	from API 20NE
68374	35581 ChEBI	indole	from API ID32E
116400	35581 ChEBI	indole
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68368	15688 ChEBI	acetoin	+		from API 20E
68377	35581 ChEBI	indole		-	from API NH
68374	35581 ChEBI	indole		-	from API ID32E
68369	35581 ChEBI	indole		-	from API 20NE
68368	35581 ChEBI	indole		-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
116400	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68377	alkaline phosphatase	+	3.1.3.1	from API NH
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68374	alpha-galactosidase	-	3.2.1.22	from API ID32E
68374	alpha-glucosidase	-	3.2.1.20	from API ID32E
68374	alpha-maltosidase	-		from API ID32E
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68374	arginine dihydrolase	-	3.5.3.6	from API ID32E
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68382	beta-galactosidase	-	3.2.1.23	from API zym
68374	beta-galactosidase	-	3.2.1.23	from API ID32E
68377	beta-galactosidase	-	3.2.1.23	from API NH
68368	beta-galactosidase	-	3.2.1.23	from API 20E
68382	beta-glucosidase	+	3.2.1.21	from API zym
68374	beta-glucosidase	+	3.2.1.21	from API ID32E
68369	beta-glucosidase	+	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68374	beta-glucuronidase	-	3.2.1.31	from API ID32E
68377	beta-lactamase	-	3.5.2.6	from API NH
116400	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	-	1.9.3.1	from API 20NE
68368	cytochrome oxidase	-	1.9.3.1	from API 20E
68377	gamma-glutamyltransferase	-	2.3.2.2	from API NH
68369	gelatinase	-		from API 20NE
68368	gelatinase	-		from API 20E
68374	L-aspartate arylamidase	-	3.4.11.21	from API ID32E
68382	leucine arylamidase	+	3.4.11.1	from API zym
68377	lipase	-		from API NH
68374	lipase	-		from API ID32E
68382	lipase (C 14)	-		from API zym
116400	lysine decarboxylase	-	4.1.1.18
68374	lysine decarboxylase	-	4.1.1.18	from API ID32E
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68374	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API ID32E
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116400	ornithine decarboxylase	-	4.1.1.17
68374	ornithine decarboxylase	-	4.1.1.17	from API ID32E
68377	ornithine decarboxylase	-	4.1.1.17	from API NH
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
116400	oxidase	-
68377	proline-arylamidase	-	3.4.11.5	from API NH
68382	trypsin	-	3.4.21.4	from API zym
68377	tryptophan deaminase	-	4.1.99.1	from API NH
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
116400	urease	-	3.5.1.5
68377	urease	-	3.5.1.5	from API NH
68374	urease	-	3.5.1.5	from API ID32E
68369	urease	-	3.5.1.5	from API 20NE
68368	urease	-	3.5.1.5	from API 20E
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	starch degradation	100	10 of 10
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	pentose phosphate pathway	100	11 of 11
66794	ribulose monophosphate pathway	100	2 of 2
66794	palmitate biosynthesis	100	22 of 22
66794	ppGpp biosynthesis	100	4 of 4
66794	coenzyme A metabolism	100	4 of 4
66794	ubiquinone biosynthesis	100	7 of 7
66794	methylglyoxal degradation	100	5 of 5
66794	folate polyglutamylation	100	1 of 1
66794	teichoic acid biosynthesis	100	1 of 1
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	lipoate biosynthesis	100	5 of 5
66794	threonine metabolism	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	valine metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	isoleucine metabolism	87.5	7 of 8
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	gluconeogenesis	87.5	7 of 8
66794	photosynthesis	85.71	12 of 14
66794	vitamin B6 metabolism	81.82	9 of 11
66794	glycine betaine biosynthesis	80	4 of 5
66794	flavin biosynthesis	80	12 of 15
66794	metabolism of amino sugars and derivatives	80	4 of 5
66794	glycogen metabolism	80	4 of 5
66794	peptidoglycan biosynthesis	80	12 of 15
66794	tetrahydrofolate metabolism	78.57	11 of 14
66794	NAD metabolism	77.78	14 of 18
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	sulfopterin metabolism	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	degradation of sugar alcohols	75	12 of 16
66794	proline metabolism	72.73	8 of 11
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	pyrimidine metabolism	71.11	32 of 45
66794	phenylalanine metabolism	69.23	9 of 13
66794	purine metabolism	67.02	63 of 94
66794	octane oxidation	66.67	2 of 3
66794	glycolate and glyoxylate degradation	66.67	4 of 6
66794	acetoin degradation	66.67	2 of 3
66794	serine metabolism	66.67	6 of 9
66794	formaldehyde oxidation	66.67	2 of 3
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	cyanate degradation	66.67	2 of 3
66794	alanine metabolism	65.52	19 of 29
66794	histidine metabolism	65.52	19 of 29
66794	methionine metabolism	65.38	17 of 26
66794	glycolysis	64.71	11 of 17
66794	leucine metabolism	61.54	8 of 13
66794	non-pathway related	60.53	23 of 38
66794	oxidative phosphorylation	59.34	54 of 91
66794	arginine metabolism	58.33	14 of 24
66794	propanol degradation	57.14	4 of 7
66794	heme metabolism	57.14	8 of 14
66794	citric acid cycle	57.14	8 of 14
66794	d-mannose degradation	55.56	5 of 9
66794	cysteine metabolism	55.56	10 of 18
66794	urea cycle	53.85	7 of 13
66794	degradation of pentoses	53.57	15 of 28
66794	tryptophan metabolism	52.63	20 of 38
66794	isoprenoid biosynthesis	50	13 of 26
66794	ketogluconate metabolism	50	4 of 8
66794	glutamate and glutamine metabolism	50	14 of 28
66794	ethanol fermentation	50	1 of 2
66794	phenylmercury acetate degradation	50	1 of 2
66794	pantothenate biosynthesis	50	3 of 6
66794	butanoate fermentation	50	2 of 4
66794	lysine metabolism	50	21 of 42
66794	adipate degradation	50	1 of 2
66794	suberin monomers biosynthesis	50	1 of 2
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	lipid metabolism	48.39	15 of 31
66794	CO2 fixation in Crenarchaeota	44.44	4 of 9
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	glutathione metabolism	42.86	6 of 14
66794	tyrosine metabolism	42.86	6 of 14
66794	ascorbate metabolism	40.91	9 of 22
66794	arachidonate biosynthesis	40	2 of 5
66794	glycine metabolism	40	4 of 10
66794	Entner Doudoroff pathway	40	4 of 10
66794	vitamin B1 metabolism	38.46	5 of 13
66794	metabolism of disaccharids	36.36	4 of 11
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	nitrate assimilation	33.33	3 of 9
66794	IAA biosynthesis	33.33	1 of 3
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	degradation of aromatic, nitrogen containing compounds	33.33	4 of 12
66794	sphingosine metabolism	33.33	2 of 6
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	allantoin degradation	33.33	3 of 9
66794	enterobactin biosynthesis	33.33	1 of 3
66794	sulfate reduction	30.77	4 of 13
66794	phenylpropanoid biosynthesis	30.77	4 of 13
66794	coenzyme M biosynthesis	30	3 of 10
66794	propionate fermentation	30	3 of 10
66794	myo-inositol biosynthesis	30	3 of 10
66794	degradation of hexoses	27.78	5 of 18
66794	d-xylose degradation	27.27	3 of 11
66794	cyclohexanol degradation	25	1 of 4
66794	lactate fermentation	25	1 of 4
66794	androgen and estrogen metabolism	25	4 of 16
66794	carnitine metabolism	25	2 of 8

Fatty acid profile

Metadata FA analysis

@ref

58594

Fatty acid	Percentage	ECL
C18:1 ω7c /12t/9t	39.1	17.824
C16:0	24.3	16
C16:1 ω7c	15.1	15.819
C14:0	11.2	14
C14:0 3OH/C16:1 ISO I	4.5	15.485
C12:0 ALDE ?	1.4	10.915
unk. 18.846/19:1 ω6c	1.3	18.846
C13:0 ISO 2OH	0.6	13.814
C18:0	0.6	18
unknown 14.503	0.6	14.503
C12:0 3OH	0.5	13.455
C16:1 ω5c	0.4	15.908
C15:0	0.3	15
Unidentified	0.3	15.175

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
58594	-	-	-	-	-	-	-	-	-	+	-	+	-	-	-	-	+	-	+	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
58594	-	+	-	-	-	+	-	-	-	-	+	+	-	-	-	-	+	-	-	-
116400	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	+	+	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
58594	-	-	+	-	-	+	-	-	-	-	-	-	-	+	+	-	-	-	+	-	-

API ID32E

@ref	ODC	ADH (Arg)	LDC (Lys)	URE	LARL	GAT	5KG	LipaseLIP	Phenol red (Acidification)RP	beta GLU	MAN	MAL	ADO	PLE	beta GUR	MNT	IND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta GAL	GLU	SAC	LARA	DARL	alpha GLU	alpha GAL	TRE	RHA	INO	CEL	SOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
58594	-	-	-	-	+	-	-	-	-	+	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-

API NH

@ref	PEN	GLU	FRU	MAL	SAC	ODC	URE	LIP	PAL	beta GAL	ProA	GGT	IND
58594	-	+	+	+	+	-	-	-	+	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Arthropoda	#Insecta
#Host Body-Site	#Gastrointestinal tract	#Stomach

Isolation

@ref	Sample type	Host species	Sampling date	Country	Country ISO 3 Code	Continent
7537	stomach of Anopheles gambiae	Anopheles gambiae		Kenya	KEN	Africa
58594	Anopheles gambiae,stomach	Anopheles gambiae	2004	Kenya	KEN	Africa
116400	Animal, Anopheles gambiae, stomach	Anopheles gambiae		Kenya	KEN	Africa

Taxonmaps

69479

Global distribution of 16S sequence AY837748 (>99% sequence identity) for Thorsellia anophelis subclade from Microbeatlas

Aquatic Samples	253
Soil Samples	39
Animal Samples	219
Plant Samples	0
Total Samples	511

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7537	1	Risk group (German classification) According to TRBA 466
116400	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	IMG-taxon 2599185261 annotated assembly for Thorsellia anophelis DSM 18579	scaffold	GCA_900111395	1123402.4	2599185261	1123402	63.54
66792	Thorsellia anophelis DSM 18579	contig		1123402.3		1123402	39.6

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
7537	Thorsellia anophelis strain CCUG 49520 16S ribosomal RNA gene, partial sequence	AY837748	1498		336804

GC content

@ref	GC-content (mol%)	Method
31664	46
7537	36	sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: IMG-taxon 2599185261 annotated assembly for Thorsellia anophelis DSM 18579
NCBI: GCA_900111395

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.47	no
125439	gram_stain	BacteriaNetⓘ	negative	75.08	no
125439	motility	BacteriaNetⓘ	no	67.72	no
125439	spore_formation	BacteriaNetⓘ	no	97.77	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Thorsellia anophelis DSM 18579 DSM 18579
NCBI: GCA_900111395.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.83	yes
125438	anaerobic	anaerobicⓘ	no	89.29	yes
125438	aerobic	aerobicⓘ	no	66.84	no
125438	spore-forming	spore-formingⓘ	no	93.23	yes
125438	thermophilic	thermophileⓘ	no	96.83	yes
125438	flagellated	motile2+ⓘ	yes	60.70	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Trametes hirsuta as an Attractive Biocatalyst for the Preparative Scale Biotransformation of Isosafrole into Piperonal.	Hernik D, Szczepanska E, Brenna E, Patejuk K, Olejniczak T, Strzala T, Boratynski F.	Molecules	10.3390/molecules28083643	2023
	Biocatalytic Syntheses of Antiplatelet Metabolites of the Thienopyridines Clopidogrel and Prasugrel Using Fungal Peroxygenases.	Kiebist J, Schmidtke KU, Schramm M, Konig R, Quint S, Kohlmann J, Zuhse R, Ullrich R, Hofrichter M, Scheibner K.	J Fungi (Basel)	10.3390/jof7090752	2021
	Internal and external microbiota of home-caught Anopheles coluzzii (Diptera: Culicidae) from Côte d'Ivoire, Africa: Mosquitoes are filthy.	Chen K, Ponnusamy L, Mouhamadou CS, Fodjo BK, Sadia GC, Affoue FPK, Deguenon JM, Roe RM.	PLoS One	10.1371/journal.pone.0278912	2022
Phylogeny	Bhargavaea ullalensis sp. nov., isolated from coastal sand.	Glaeser SP, Arun AB, Rekha PD, Prabhu S, Busse HJ, Kampfer P.	Int J Syst Evol Microbiol	10.1099/ijs.0.045062-0	2013
Phylogeny	Mycetocola miduiensis sp. nov., a psychrotolerant bacterium isolated from Midui glacier.	Zhu L, Liu Q, Liu H, Zhou Y, Xin Y, Dong X.	Int J Syst Evol Microbiol	10.1099/ijs.0.047985-0	2013
Phylogeny	Thorsellia anophelis gen. nov., sp. nov., a new member of the Gammaproteobacteria.	Kampfer P, Lindh JM, Terenius O, Haghdoost S, Falsen E, Busse HJ, Faye I	Int J Syst Evol Microbiol	10.1099/ijs.0.63999-0	2006

References

#7537	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18579
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27944	IJSEM 335 2006 ( DOI 10.1099/ijs.0.63999-0 , PubMed 16449435 )
#31664	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27944
#32802	; Curators of the CIP;
#58594	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 49520
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68368	Automatically annotated from API 20E .
#68369	Automatically annotated from API 20NE .
#68374	Automatically annotated from API ID32E .
#68377	Automatically annotated from API NH .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116400	Collection of Institut Pasteur ; Curators of the CIP; CIP 108754
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Thorsellia anophelis (DSM 18579, CCUG 49520, CIP 108754)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

Fatty acid profile

API 20E

API zym

API 20NE

API ID32E

API NH

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900111395

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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