Yersinia enterocolitica subsp. enterocolitica DSM 9499 is a Gram-negative, motile, rod-shaped bacterium that was isolated from human faeces.
Gram-negative motile rod-shaped Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Enterobacterales |
| Family Yersiniaceae |
| Genus Yersinia |
| Species Yersinia enterocolitica subsp. enterocolitica |
| Full scientific name Yersinia enterocolitica subsp. enterocolitica (Schleifstein and Coleman 1939) Neubauer et al. 2000 |
| @ref | Gram stain | Cell shape | Motility | |
|---|---|---|---|---|
| 119058 | negative | rod-shaped |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 41869 | MEDIUM 3 - Columbia agar | Columbia agar (39.000 g);distilled water (1000.000 ml) | |||
| 119058 | CIP Medium 72 | Medium recipe at CIP | |||
| 119058 | CIP Medium 3 | Medium recipe at CIP | |||
| 3614 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water | ||
| 3614 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
| 119058 | Spore formationno |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68368 | 27613 ChEBI | amygdalin | + | fermentation | from API 20E |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68368 | 17634 ChEBI | D-glucose | + | fermentation | from API 20E |
| 68368 | 16899 ChEBI | D-mannitol | + | fermentation | from API 20E |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68368 | 30849 ChEBI | L-arabinose | + | fermentation | from API 20E |
| 68368 | 62345 ChEBI | L-rhamnose | - | fermentation | from API 20E |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 68368 | 28053 ChEBI | melibiose | - | fermentation | from API 20E |
| 68368 | 17268 ChEBI | myo-inositol | + | fermentation | from API 20E |
| 68368 | 18257 ChEBI | ornithine | + | degradation | from API 20E |
| 68368 | 30911 ChEBI | sorbitol | + | fermentation | from API 20E |
| 68368 | 17992 ChEBI | sucrose | + | fermentation | from API 20E |
| 68368 | 27897 ChEBI | tryptophan | + | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | + | hydrolysis | from API 20E |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68368 | cytochrome oxidase | - | 1.9.3.1 | from API 20E |
| 68368 | gelatinase | - | from API 20E | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 | from API 20E |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
| @ref | ONPG | ADH (Arg) | LDC (Lys) | ODC | CIT | H2S productionH2S | URE | TDA (Trp) | IND | Acetoin production (Voges Proskauer test)VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX | Nitrite productionNO2 | Reduction to N2N2 | MotilityMOB | Growth on MacConkey mediumMAC | OF-O | OF-F | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3614 | + | - | - | + | - | - | + | - | + | + | - | + | + | + | + | - | + | - | + | + | - | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. | not determinedn.d. |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Behavior of Yersinia enterocolitica in UF White Cheese: Impact of Different Storage Temperatures on Various Strains | AbdollahI E, Hanifian S. | Journal of food safety. | 10.1111/jfs.12237 | 2016 | ||
| Development and Inter-Laboratory Validation of Diagnostics Panel for Detection of Biothreat Bacteria Based on MOL-PCR Assay. | Jelinkova P, Hrdy J, Markova J, Dresler J, Pajer P, Pavlis O, Branich P, Borilova G, Reichelova M, Babak V, Reslova N, Kralik P. | Microorganisms | 10.3390/microorganisms9010038 | 2020 | ||
| Phylogeny | Clear distinction between Burkholderia mallei and Burkholderia pseudomallei using fluorescent motB primers. | Schmoock G, Elschner M, Sprague LD. | Acta Vet Scand | 10.1186/s13028-015-0104-4 | 2015 | |
| Enzymology | Evaluation of the use of PCR and reverse transcriptase PCR for detection of pathogenic bacteria in biosolids from anaerobic digestors and aerobic composters. | Burtscher C, Wuertz S. | Appl Environ Microbiol | 10.1128/aem.69.8.4618-4627.2003 | 2003 | |
| Genotyping of human and porcine Yersinia enterocolitica, Yersinia intermedia, and Yersinia bercovieri strains from Switzerland by amplified fragment length polymorphism analysis. | Boghenbor KK, On SL, Kokotovic B, Baumgartner A, Wassenaar TM, Wittwer M, Bissig-Choisat B, Frey J. | Appl Environ Microbiol | 10.1128/aem.01996-05 | 2006 | ||
| PCR detection of virulence genes in Yersinia enterocolitica and Yersinia pseudotuberculosis and investigation of virulence gene distribution. | Thoerner P, Bin Kingombe CI, Bogli-Stuber K, Bissig-Choisat B, Wassenaar TM, Frey J, Jemmi T. | Appl Environ Microbiol | 10.1128/aem.69.3.1810-1816.2003 | 2003 | ||
| Phylogeny | Cold Enrichment Methods for the Detection of Foodborne Yersiniosis: Friend or Foe? | Zhang Y, On SLW. | Pathogens | 10.3390/pathogens11020278 | 2022 | |
| Elastic Light Scatter Pattern Analysis for the Expedited Detection of Yersinia Species in Pork Mince: Proof of Concept. | On SLW, Zhang Y, Gehring A, Patsekin V, Chelikani V, Flint S, Wang H, Billington C, Fletcher GC, Lindsay J, Robinson JP. | Front Microbiol | 10.3389/fmicb.2021.641801 | 2021 | ||
| Pathogenicity | A study on antimicrobial, antioxidant and antimutagenic activities of Elaeagnus angustifolia L. leaves. | Okmen G, Turkcan O. | Afr J Tradit Complement Altern Med | 10.4314/ajtcam.v11i1.17 | 2014 | |
| Pathogenicity | The antimicrobial activity of Liquidambar orientalis mill. against food pathogens and antioxidant capacity of leaf extracts. | Okmen G, Turkcan O, Ceylan O, Gork G. | Afr J Tradit Complement Altern Med | 10.4314/ajtcam.v11i5.4 | 2014 | |
| Differential diagnosis of Brucella abortus by real-time PCR based on a single-nucleotide polymorphisms. | Kim JY, Kang SI, Lee JJ, Lee K, Sung SR, Erdenebaataar J, Vanaabaatar B, Jung SC, Park YH, Yoo HS, Her M. | J Vet Med Sci | 10.1292/jvms.15-0541 | 2016 | ||
| Enzymology | Multilocus variable-number tandem-repeat analysis, pulsed-field gel electrophoresis, and antimicrobial susceptibility patterns in discrimination of sporadic and outbreak-related strains of Yersinia enterocolitica. | Sihvonen LM, Toivonen S, Haukka K, Kuusi M, Skurnik M, Siitonen A. | BMC Microbiol | 10.1186/1471-2180-11-42 | 2011 | |
| Pathogenicity | Russian olive (Elaeagnus angustifolia L.): From a variety of traditional medicinal applications to its novel roles as active antioxidant, anti-inflammatory, anti-mutagenic and analgesic agent. | Hamidpour R, Hamidpour S, Hamidpour M, Shahlari M, Sohraby M, Shahlari N, Hamidpour R. | J Tradit Complement Med | 10.1016/j.jtcme.2015.09.004 | 2017 | |
| Metabolism | Diagnostic bioluminescent phage for detection of Yersinia pestis. | Schofield DA, Molineux IJ, Westwater C. | J Clin Microbiol | 10.1128/jcm.01533-09 | 2009 | |
| Enzymology | Comprehensive Laboratory Evaluation of a Lateral Flow Assay for the Detection of Yersinia pestis. | Prentice KW, DePalma L, Ramage JG, Sarwar J, Parameswaran N, Petersen J, Yockey B, Young J, Joshi M, Thirunavvukarasu N, Singh A, Chapman C, Avila JR, Pillai CA, Manickam G, Sharma SK, Morse SA, Venkateswaran KV, Anderson K, Hodge DR, Pillai SP. | Health Secur | 10.1089/hs.2019.0094 | 2019 | |
| Malaria parasite infection compromises colonization resistance to an enteric pathogen by reducing gastric acidity. | Walker GT, Yang G, Tsai JY, Rodriguez JL, English BC, Faber F, Souvannaseng L, Butler BP, Tsolis RM. | Sci Adv | 10.1126/sciadv.abd6232 | 2021 | ||
| Polyphenolic compounds in the combat of foodborne infections - An update on recent evidence. | Menikheim CB, Mousavi S, Bereswill S, Heimesaat MM. | Eur J Microbiol Immunol (Bp) | 10.1556/1886.2024.00018 | 2024 | ||
| Genomic Characterization of Piscicolin CM22 Produced by Carnobacterium maltaromaticum CM22 Strain Isolated from Salmon (Salmo salar). | Gonzalez-Gragera E, Garcia-Lopez JD, Teso-Perez C, Jimenez-Hernandez I, Peralta-Sanchez JM, Valdivia E, Montalban-Lopez M, Martin-Platero AM, Banos A, Martinez-Bueno M. | Probiotics Antimicrob Proteins | 10.1007/s12602-024-10316-1 | 2025 | ||
| Valorisation of Olea europaea L. Olive Leaves through the Evaluation of Their Extracts: Antioxidant and Antimicrobial Activity. | Sanchez-Gutierrez M, Bascon-Villegas I, Rodriguez A, Perez-Rodriguez F, Fernandez-Prior A, Rosal A, Carrasco E. | Foods | 10.3390/foods10050966 | 2021 | ||
| Cultivation | A new selective medium for Bifidobacterium spp. | Nebra Y, Blanch AR. | Appl Environ Microbiol | 10.1128/aem.65.11.5173-5176.1999 | 1999 | |
| Enzymology | Development of a PCR assay for detection of Yersinia ruckeri in tissues of inoculated and naturally infected trout. | Gibello A, Blanco MM, Moreno MA, Cutuli MT, Domenech A, Dominguez L, Fernandez-Garayzabal JF. | Appl Environ Microbiol | 10.1128/aem.65.1.346-350.1999 | 1999 |
| #3614 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 9499 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #41869 | ; Curators of the CIP; |
| #68368 | Automatically annotated from API 20E . |
| #119058 | Collection of Institut Pasteur ; Curators of the CIP; CIP 81.42 |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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