Name: Xenorhabdus magdalenensis DSM 24915
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5209

Type strain:

Species: Xenorhabdus magdalenensis

Culture col. no.: DSM 24915, IMI 397775

Strain history: <- S. Edgington, CABI; IMI 397775

NCBI tax ID(s): 995054 (species)

SI-ID 406256

DSM 24915

Section

Xenorhabdus magdalenensis DSM 24915 is a mesophilic, Gram-negative animal pathogen that was isolated from gut of the insect-pathogenic nematode Steinernema australe.

Gram-negative
animal pathogen
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Morganellaceae*
	Genus	*Xenorhabdus*
	Species	**Xenorhabdus magdalenensis**
	Full Scientific Name (LPSN)	Xenorhabdus magdalenensis Tailliez et al. 2012

Information on morphological and physiological properties Morphology

[Ref.: #30356]	Gram stain	negative

[Ref.: #30356]

Pigment production

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17800]

Culture medium

REACTIVATION WITH LIQUID MEDIUM (DSMZ Medium 535b)

[Ref.: #17800]

Culture medium growth

[Ref.: #17800]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17800]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #17800]			growth	28 °C
[Ref.: #30356]			growth	34 °C

[Ref.: #17800]	Temperature range	mesophilic
[Ref.: #30356]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30356]	glucose ChEBI	+	carbon source
[Ref.: #30356]	glycerol ChEBI	+	carbon source
[Ref.: #30356]	maltose ChEBI	+	carbon source
[Ref.: #30356]	mannose ChEBI	+	carbon source
[Ref.: #30356]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #30356]	trehalose ChEBI	+	carbon source

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17800]	Sample type/isolated from	gut of the insect-pathogenic nematode Steinernema australe
[Ref.: #17800]	Host species	Steinernema australe
[Ref.: #17800]	Geographic location (country and/or sea, region)	Patagonia, Isla Magdalena
[Ref.: #17800]	Country	Chile
[Ref.: #17800]	Country ISO 3 Code	CHL
[Ref.: #17800]	Continent	Middle and South America
* marker position based on {}

Isolation sources categories

#Host	#Invertebrates (Other)	#Nematoda
#Host Body-Site	#Gastrointestinal tract	#Stomach

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HQ877464 (>99% sequence identity) for Xenorhabdus from Microbeatlas

Aquatic Samples	5
Soil Samples	11
Animal Samples	795
Plant Samples	5
Total Samples	816

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17800]	Pathogenicity (animal)	yes
[Ref.: #17800]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17800]	Xenorhabdus magdalenensis strain IMI 397775 16S ribosomal RNA gene, partial sequence	HQ877464	1458	ENA	995054 tax ID

Availability in culture collections External links

[Ref.: #17800]

Culture collection no.

DSM 24915, IMI 397775

[Ref.: #74701]

SI-ID 406256

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Xenorhabdus magdalenensis sp. nov., the symbiotic bacterium associated with Steinernema australe.	Tailliez P, Pages S, Edgington S, Tymo LM, Buddie AG	Int J Syst Evol Microbiol	10.1099/ijs.0.034322-0	2011	*

References

#17800

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24915

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30356

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26696 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#74701

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406256.1 )

#26696

IJSEM 1761 2012 ( DOI 10.1099/ijs.0.034322-0 , PubMed 21948091 )

* These data were automatically processed and therefore are not curated

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