Sulfurihydrogenibium rodmanii (DSM 19533, ATCC BAA-1536, OCM 900)

Name: Sulfurihydrogenibium rodmanii (DSM 19533, ATCC BAA-1536, OCM 900)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 520

Type strain

Strain Designation UZ3-5

Culture col. no. DSM 19533 ATCC BAA-1536 OCM 900 UZ3-5

NCBI tax ID(s) 380763

Special Collections DSMZ Literature strains

History DSMZ <- A.-L. Reysenbach, Dept. Biology, Portland State Univ., USA; UZ3-5

Links

Sulfurihydrogenibium rodmanii UZ3-5 is a microaerophile, Gram-negative, motile bacterium that was isolated from terrestrial hot spring .

Gram-negative motile rod-shaped microaerophile 16S sequence Bacteria

Name and taxonomic classification

SI-ID 401128

DSM 19533

@ref 20215

Last LPSN update 2026-05-29 08:25:03

Domain Bacteria

Phylum Aquificota

Class Aquificia

Order Aquificales

Family Hydrogenothermaceae

Genus Sulfurihydrogenibium

Species Sulfurihydrogenibium rodmanii

Full scientific name Sulfurihydrogenibium rodmanii O'Neill et al. 2008

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
32396	negative	2 µm	0.5 µm	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
8154	MS-MEDIUM (MODIFIED) (DSMZ Medium 1145)		Medium recipe at MediaDive	Name: MS-MEDIUM (MODIFIED) (DSMZ Medium 1145) Composition: MgSO4 x 7 H2O 7.0 g/l Elemental sulphur 5.0 g/l MgCl2 x 6 H2O 2.0 g/l NH4Cl 2.0 g/l NaS2O3 x 5 H2O 2.0 g/l CaCl2 x 2 H2O 0.8 g/l NaOH 0.79994 g/l KCl 0.48 g/l K2HPO4 x 3 H2O 0.3 g/l Na2-EDTA x 2 H2O 0.005 g/l CoCl2 x 6 H2O 0.0015 g/l ZnCl2 0.001 g/l FeSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l AlCl3 x 6 H2O 0.0004 g/l Na2WO4 x 2 H2O 0.0003 g/l CuCl2 x 2 H2O 0.0002 g/l NiSO4 x 6 H2O 0.0002 g/l H3BO3 0.0001 g/l H2SeO3 0.0001 g/l Na2MoO4 x 2 H2O 0.0001 g/l Double distilled water Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
8154	positive	growth	68
32396	positive	growth	55-80
32396	positive	optimum	75

Culture pH

@ref	Ability	Type	PH
32396	positive	optimum	6
32396	positive	growth	5-7.2

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
8154	microaerophile
32396	microaerophile

Halophily

@ref	Salt	Growth	Tested relation	Concentration
32396	NaCl	positive	growth	0-0.9 %

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Thermal spring
#Environmental	#Terrestrial	-
#Condition	#Thermophilic (>45°C)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
8154	terrestrial hot spring (74 °C, pH 6.0)	Kamchatka Peninsula, Uzon Caldera	Russia	RUS	Asia

Taxonmaps

69479

Global distribution of 16S sequence AM259502 (>99% sequence identity) for Sulfurihydrogenibium rodmanii from Microbeatlas

Aquatic Samples	75
Soil Samples	0
Animal Samples	2
Plant Samples	0
Total Samples	77

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8154	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
8154	Sulfurihydrogenibium rodmanii partial 16S rRNA gene, type strain UZ3-5T	AM259502	1444		380763

GC content

@ref	GC-content (mol%)
8154	35.0
32396	35

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sulfurihydrogenibium kristjanssonii sp. nov., a hydrogen- and sulfur-oxidizing thermophile isolated from a terrestrial Icelandic hot spring.	Flores GE, Liu Y, Ferrera I, Beveridge TJ, Reysenbach AL	Int J Syst Evol Microbiol	10.1099/ijs.0.65570-0	2008
Phylogeny	Sulfurihydrogenibium rodmanii sp. nov., a sulfur-oxidizing chemolithoautotroph from the Uzon Caldera, Kamchatka Peninsula, Russia, and emended description of the genus Sulfurihydrogenibium.	O'Neill AH, Liu Y, Ferrera I, Beveridge TJ, Reysenbach AL	Int J Syst Evol Microbiol	10.1099/ijs.0.65431-0	2008

References

#8154	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19533
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#28620	IJSEM 1147 2008 ( DOI 10.1099/ijs.0.65431-0 , PubMed 18450704 )
#32396	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28620
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Sulfurihydrogenibium rodmanii (DSM 19533, ATCC BAA-1536, OCM 900)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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