Tatumella citrea (DSM 13699, ATCC 31623, CCUG 30156)

Name: Tatumella citrea (DSM 13699, ATCC 31623, CCUG 30156)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5177

Type strain

Strain Designation BD 875, FERM-P 5449

Culture col. no. DSM 13699 ATCC 31623 CCUG 30156 CIP 105599 FERM P-5449 9 more

NCBI tax ID(s) 53336

Special Collections DSMZ CCUG JCM KCTC CIP

History <- ATCC <- Shionogi Co, Ltd. (Erwinia citreus) 1998, B. Kageyama, Shionogi & Co., Osaka, Japan: strain SHS 2003 B. Kageyama SHS 2003. CIP <- 1998, B. Kageyama, Shionogi and Co., Osaka, Japan: strain SHS 2003

Links

Tatumella citrea BD 875 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from mandarin orange.

Gram-negative rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 46735

ATCC 31623,DSM 13699,CCUG 30156,CIP 105599,JCM 8882,NCPPB 3826,CCM 4319,KCTC 2805,LMG 22049,KCTC 12451

@ref 20215

Last LPSN update 2026-02-09 11:18:54

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Erwiniaceae

Genus Tatumella

Species Tatumella citrea

Full scientific name Tatumella citrea (Kageyama et al. 1992) Brady et al. 2010

Synonyms (1)

Pantoea citrea

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
118296	negative	rod-shaped
125439	negative		97.7
125438	negative		99.494

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
5122	REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a)	Medium recipe at MediaDive	Name: REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
39325	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
118296	CIP Medium 72	Medium recipe at CIP
118296	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
5122	positive	growth	28
39325	positive	growth	25
49940	positive	growth	30-37
67770	positive	growth	30
118296	positive	growth	25-37
118296	negative	growth	5
118296	negative	growth	10
118296	negative	growth	41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
49940	aerobe
118296	facultative anaerobe
125439	obligate aerobe	98.2

Spore formation

@ref	Spore formation	Confidence
125439		94.8
125438		91.374

Compound production

5122

Compound2,5 diketo-D-gulonic acid

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68374	29016 ChEBI	arginine	+	hydrolysis	from API ID32E
68374	17057 ChEBI	cellobiose	+	builds acid from	from API ID32E
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
118296	16947 ChEBI	citrate	+	carbon source
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68374	18333 ChEBI	D-arabitol	+	builds acid from	from API ID32E
68371	18333 ChEBI	D-arabitol	+	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68374	18024 ChEBI	D-galacturonic acid	-	builds acid from	from API ID32E
68374	17634 ChEBI	D-glucose	+	builds acid from	from API ID32E
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68374	16899 ChEBI	D-mannitol	+	builds acid from	from API ID32E
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
118296	17234 ChEBI	glucose	+	fermentation
118296	17234 ChEBI	glucose	+	degradation
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68374	30849 ChEBI	L-arabinose	+	builds acid from	from API ID32E
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68374	18403 ChEBI	L-arabitol	-	builds acid from	from API ID32E
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68374	62345 ChEBI	L-rhamnose	+	builds acid from	from API ID32E
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
118296	17716 ChEBI	lactose	-	fermentation
68374	25094 ChEBI	lysine	-	degradation	from API ID32E
118296	15792 ChEBI	malonate	-	assimilation
68374	15792 ChEBI	malonate	-	assimilation	from API ID32E
68374	17306 ChEBI	maltose	+	builds acid from	from API ID32E
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
118296	29864 ChEBI	mannitol	+	fermentation
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68374	17268 ChEBI	myo-inositol	+	builds acid from	from API ID32E
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
118296	17632 ChEBI	nitrate	+	reduction
118296	16301 ChEBI	nitrite	-	reduction
68374	18257 ChEBI	ornithine	-	degradation	from API ID32E
68374	18394 ChEBI	palatinose	+	builds acid from	from API ID32E
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	+	builds acid from	from API 50CH acid
68374		Potassium 5-ketogluconate	+	builds acid from	from API ID32E
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68374	15963 ChEBI	ribitol	+	builds acid from	from API ID32E
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
118296	132112 ChEBI	sodium thiosulfate	-	builds gas from
68374	30911 ChEBI	sorbitol	+	builds acid from	from API ID32E
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68374	17992 ChEBI	sucrose	+	builds acid from	from API ID32E
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68374	27082 ChEBI	trehalose	+	builds acid from	from API ID32E
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68374	27897 ChEBI	tryptophan	-	energy source	from API ID32E
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68374	16199 ChEBI	urea	-	hydrolysis	from API ID32E
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
118296	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite
67770	18281 ChEBI	2,5-didehydro-D-gluconic acid
68374	35581 ChEBI	indole	from API ID32E
118296	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test	Voges-proskauer-test	Methylred-test
118296	15688 ChEBI	acetoin		+
118296	17234 ChEBI	glucose			+
68374	35581 ChEBI	indole	-			from API ID32E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
118296	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68374	alpha-galactosidase	-	3.2.1.22	from API ID32E
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68374	alpha-glucosidase	-	3.2.1.20	from API ID32E
68374	alpha-maltosidase	-		from API ID32E
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68374	arginine dihydrolase	+	3.5.3.6	from API ID32E
68382	beta-galactosidase	-	3.2.1.23	from API zym
118296	beta-galactosidase	+	3.2.1.23
68374	beta-galactosidase	+	3.2.1.23	from API ID32E
68382	beta-glucosidase	+	3.2.1.21	from API zym
68374	beta-glucosidase	-	3.2.1.21	from API ID32E
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68374	beta-glucuronidase	-	3.2.1.31	from API ID32E
118296	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
118296	gelatinase	-
68374	L-aspartate arylamidase	-	3.4.11.21	from API ID32E
68382	leucine arylamidase	+	3.4.11.1	from API zym
68374	lipase	-		from API ID32E
68382	lipase (C 14)	-		from API zym
118296	lysine decarboxylase	-	4.1.1.18
68374	lysine decarboxylase	-	4.1.1.18	from API ID32E
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68374	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API ID32E
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
118296	ornithine decarboxylase	-	4.1.1.17
68374	ornithine decarboxylase	-	4.1.1.17	from API ID32E
118296	oxidase	-
118296	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	-	3.4.21.4	from API zym
118296	tryptophan deaminase	-
118296	urease	-	3.5.1.5
68374	urease	-	3.5.1.5	from API ID32E
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
118296	-	+	-	-	-	+	-	-	-	-	+	+	-	-	-	+	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
118296	not determinedn.d.	+	-	-	+	+	+/-	-	-	-	+	+	+	+	-	-	-	-	+/-	-	-	-	+	-	-	+/-	+/-	-	+	+/-	+	-	+	-	-	-	-	-	-	+/-	-	-	+	+/-	-	+	-	+/-	-	+

API ID32E

@ref	ODC	ADH (Arg)	LDC (Lys)	URE	LARL	GAT	5KG	LipaseLIP	Phenol red (Acidification)RP	beta GLU	MAN	MAL	ADO	PLE	beta GUR	MNT	IND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta GAL	GLU	SAC	LARA	DARL	alpha GLU	alpha GAL	TRE	RHA	INO	CEL	SOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
49940	-	+	-	-	-	-	+	-	-	-	+	+	+	+	-	-	-	-	+	+	+	+	+	-	-	+	+	+	+	+	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
118296	not determinedn.d.	+	+	+	+	+	-	-	-	-	+	+	+	+	+	+	-	-	-	-	+	+	-	-	-	-	-	+	-	-	-	-	+	-	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	+	+	+	-	-	+	-	-	+	+	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	+	-	-	-	+	-	-	+	+	+	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body-Site	#Plant	#Fruit (Seed)

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent	Isolation date
5122	mandarin orange	Japan	JPN	Asia
49940	Mandarin orange	Japan	JPN	Asia
67770	Mandarin orange	Japan	JPN	Asia
118296	Mandarin orange	Japan	JPN	Asia	1976

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5122	1	Risk group (German classification) According to TRBA 466
118296	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM216358v1 assembly for Tatumella citrea DSM 13699	complete	GCA_002163585	53336.7	2757320934	53336	99.18

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Pantoea citrea strain DSM 13699 16S ribosomal RNA gene, partial sequence	FJ756352	1361	53336
5122	Pantoea citrea strain JCM 8882 16S ribosomal RNA, partial sequence	DQ838096	1351	53336
5122	Pantoea citrea strain LMG 22049 16S ribosomal RNA gene, partial sequence	EF688008	1422	53336
124043	Tatumella citrea gene for 16S ribosomal RNA, partial sequence, strain: JCM 8882.	AB907782	1493	53336

GC content

@ref	GC-content (mol%)	Method
5122	49.8	high performance liquid chromatography (HPLC)
67770	49.7	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Tatumella citrea strain DSM 13699
PATRIC: 53336.7

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	94.80	no
125439	motility	BacteriaNetⓘ	yes	79.10	no
125439	gram_stain	BacteriaNetⓘ	negative	97.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Tatumella citrea DSM 13699
NCBI: GCA_002163585.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.49	no
125438	anaerobic	anaerobicⓘ	no	98.66	yes
125438	aerobic	aerobicⓘ	no	69.27	no
125438	spore-forming	spore-formingⓘ	no	91.37	no
125438	thermophilic	thermophileⓘ	no	99.50	no
125438	flagellated	motile2+ⓘ	yes	81.51	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Alkane degradation mechanism of Mixta calida HXX308 isolated from sediment of the Mariana Trench.	Yang Y, He X, Zhang Y, Zhang XH.	Front Microbiol	10.3389/fmicb.2025.1579612	2025
	Multigene editing in the Escherichia coli genome via the CRISPR-Cas9 system.	Jiang Y, Chen B, Duan C, Sun B, Yang J, Yang S.	Appl Environ Microbiol	10.1128/aem.04023-14	2015
Genetics	Barriers to genome editing with CRISPR in bacteria.	Vento JM, Crook N, Beisel CL.	J Ind Microbiol Biotechnol	10.1007/s10295-019-02195-1	2019
Genetics	Genome editing and transcriptional repression in Pseudomonas putida KT2440 via the type II CRISPR system.	Sun J, Wang Q, Jiang Y, Wen Z, Yang L, Wu J, Yang S.	Microb Cell Fact	10.1186/s12934-018-0887-x	2018
Enzymology	Isolation and characterization of a cryptic plasmid from Erwinia citreus ATCC 31623.	Bilic M, Delic V.	J Appl Microbiol	10.1046/j.1365-2672.1997.00258.x	1997
	Conversion of Glucose to 2-Keto-l-Gulonate, an Intermediate in l-Ascorbate Synthesis, by a Recombinant Strain of Erwinia citreus.	Grindley JF, Payton MA, van de Pol H, Hardy KG.	Appl Environ Microbiol	10.1128/aem.54.7.1770-1775.1988	1988
Genetics	A modified pCas/pTargetF system for CRISPR-Cas9-assisted genome editing in Escherichia coli.	Li Q, Sun B, Chen J, Zhang Y, Jiang Y, Yang S	Acta Biochim Biophys Sin (Shanghai)	10.1093/abbs/gmab036	2021
Genetics	Erwinia wuhanensis sp. nov. isolated from human blood.	Zhang Y, Zhan Y, Yang J, Lu Z.	Front Microbiol	10.3389/fmicb.2025.1675452	2025
Phylogeny	Transfer of Pantoea citrea, Pantoea punctata and Pantoea terrea to the genus Tatumella emend. as Tatumella citrea comb. nov., Tatumella punctata comb. nov. and Tatumella terrea comb. nov. and description of Tatumella morbirosei sp. nov.	Brady CL, Venter SN, Cleenwerck I, Vandemeulebroecke K, De Vos P, Coutinho TA	Int J Syst Evol Microbiol	10.1099/ijs.0.012070-0	2009
Phylogeny	Pantoea punctata sp. nov., Pantoea citrea sp. nov., and Pantoea terrea sp. nov. isolated from fruit and soil samples.	Kageyama B, Nakae M, Yagi S, Sonoyama T	Int J Syst Bacteriol	10.1099/00207713-42-2-203	1992

References

#5122	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13699
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#39325	; Curators of the CIP;
#49940	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30156
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68374	Automatically annotated from API ID32E .
#68382	Automatically annotated from API zym .
#118296	Collection of Institut Pasteur ; Curators of the CIP; CIP 105599
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Tatumella citrea (DSM 13699, ATCC 31623, CCUG 30156)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Compound production

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API 50CHac

API ID32E

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_002163585

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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