Shigella flexneri 24570 | Type strain | DSM 4782, ATCC 29903, KCTC 22192, WDCM 00125, CCUG 56439, CIP 82.48

Strain identifier

BacDive ID: 5171

Type strain:

Species: Shigella flexneri

Strain Designation: 24570

Culture col. no.: DSM 4782, ATCC 29903, KCTC 22192, WDCM 00125, CCUG 56439, CIP 82.48

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	31-03-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Proteobacteria
	Class	Gammaproteobacteria
	Order	Enterobacterales
	Family	Enterobacteriaceae
	Genus	Shigella
	Species	Shigella flexneri
	Full Scientific Name (PNU)	Shigella flexneri Castellani and Chalmers 1919 (Approved Lists 1980)

Information on morphological and physiological propertiesMorphology and physiology

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #1822]	7478	-	-	-	-	-	-	-	-	+	+	-	+	+	-	-	-	-	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® ID32E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Ornithine decarboxylaseODC	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Urease/urea hydrolysisURE	Acid from L-arabitolLARL	Acid from D-galacturonic acidGAT	Acid from 5-Ketogluconate5KG	LipaseLIP	Phenol red (Acidification)RP	beta-Glucosidasebeta GLU	Acid from D-mannitolMAN	Acid from maltoseMAL	Acid from D-adonitolADO	Acid from palatinosePLE	beta-Glucuronidasebeta GUR	MalonateMNT	Indole productionIND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta-Galactosidasebeta GAL	Acid from D-glucoseGLU	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	alpha-Glucosidasealpha GLU	alpha-Galactosidasealpha GAL	Acid from trehaloseTRE	Acid from L-rhamnoseRHA	Acid from inositolINO	Acid from cellobioseCEL	Acid from sorbitolSOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
[Ref.: #60957]	1854	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	+	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-

Note that the displayed test results represent raw data and therefore may deviate!

Antibiotic susceptibility testing

Test 1

Reference

[Ref.: #1822]
Mueller-Hinton Agar



yes
Inhibition zone diameter in mm
8-10
resistant0
24
32
30
24
30-32
40
38-40
34-36
30
34
22
22
resistant0
12-14
resistant0
34
34
16
30
28
resistant0
16
32
18-20
26-28
40
resistant0
34
32-34
resistant0
resistant0
resistant0
resistant0
30

Only first 15 entries are displayed. Click here to see all.

[Ref.: #60957]

Oxygen tolerance

aerobe

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #1822]

Culture medium

Nutrient agar (NA)

[Ref.: #1822]

Culture medium growth

[Ref.: #1822]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #36625]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #36625]

Culture medium growth

[Ref.: #36625]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #1822]	growth	37 ̊C
[Ref.: #36625]	growth	30 ̊C
[Ref.: #60957]	growth	30 ̊C

[Ref.: #1822]	Temperature range	mesophilic
[Ref.: #36625]	Temperature range	mesophilic
[Ref.: #60957]	Temperature range	mesophilic

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #1822]	Pathogenicity (human)	yes
[Ref.: #1822]	Pathogenicity (animal)	yes
[Ref.: #1822]	Biosafety level	2	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #1822]	whole genome shotgun sequence, Whole Genome Shotgun (WGS) Sequence INSDC	Shigella flexneri 2a strain 24570, whole genome shotgun sequencing project	CELV01000000 ENA		327	42897 tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Shigella flexneri ATCC 29903 6-phosphogluconate dehydrogenase (gnd) gene, partial cds	U14468 ENA		1335	623 tax ID	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	S.flexneri 16S rRNA gene	X96963 ENA	16S	1488	623 tax ID	*

Availability in culture collectionsStrain availability

[Ref.: #1822]

Culture collection no.

DSM 4782, ATCC 29903, KCTC 22192, WDCM 00125, CCUG 56439, CIP 82.48

[Ref.: #1822]

Strain history

<- ATCC <- D.J. Brenner; 24570

[Ref.: #20218]

Associated Passport(s) in StrainInfo

155122, 120485, 898895

References

#1822

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4782

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#36625 ; Curators of the CIP;
#60957 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56439
* These References are textmined

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