Salmonella enterica subsp. diarizonae | Type strain | CCUG 30040, DSM 14847, ATCC 43973, CIP 82.31, NCTC 10060

Strain identifier

BacDive ID: 5128

Type strain:

Species: Salmonella enterica subsp. diarizonae

Culture col. no.: CCUG 30040, DSM 14847, ATCC 43973, CIP 82.31, NCTC 10060

Strain history: 1982, L. Le Minor, Inst. Pasteur, Paris, France, Salmonella choleraesuis subsp. diarizonae

Section

Name and taxonomic classification
Culture and growth conditions
Physiology and metabolism
Safety information
Sequence information

External links

Salmonella enterica subsp. diarizonae CCUG 30040 is a mesophilic bacterium of the family Enterobacteriaceae.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	23-11-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Proteobacteria
	Class	Gammaproteobacteria
	Order	Enterobacterales
	Family	Enterobacteriaceae
	Genus	Salmonella
	Species	Salmonella enterica subsp. diarizonae
	Full Scientific Name (PNU)	Salmonella enterica subsp. diarizonae (Le Minor et al. 1985) Le Minor and Popoff 1987

Synonym

Salmonella choleraesuis subsp. diarizonae

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #5575]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #5575]

Culture medium growth

[Ref.: #5575]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #5575]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #5575]

Culture medium growth

[Ref.: #5575]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #5575]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #5575]

Culture medium growth

[Ref.: #5575]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #40232]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #40232]

Culture medium growth

[Ref.: #40232]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #5575]	growth	30 ̊C
[Ref.: #40232]	growth	30 ̊C
[Ref.: #49870]	growth	30 ̊C

[Ref.: #5575]	Temperature range	mesophilic
[Ref.: #40232]	Temperature range	mesophilic
[Ref.: #49870]	Temperature range	mesophilic

Information on physiology and metabolismPhysiology and metabolism

API® ID32E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Ornithine decarboxylaseODC	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Urease/urea hydrolysisURE	Acid from L-arabitolLARL	Acid from D-galacturonic acidGAT	Acid from 5-Ketogluconate5KG	LipaseLIP	Phenol red (Acidification)RP	beta-Glucosidasebeta GLU	Acid from D-mannitolMAN	Acid from maltoseMAL	Acid from D-adonitolADO	Acid from palatinosePLE	beta-Glucuronidasebeta GUR	MalonateMNT	Indole productionIND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta-Galactosidasebeta GAL	Acid from D-glucoseGLU	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	alpha-Glucosidasealpha GLU	alpha-Galactosidasealpha GAL	Acid from trehaloseTRE	Acid from L-rhamnoseRHA	Acid from inositolINO	Acid from cellobioseCEL	Acid from sorbitolSOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
[Ref.: #49870]	1143	+	+	+	-	-	-	-	+	-	-	+	+	-	-	+	+	-	-	+	+	-	+	-	-	+	+	+	-	-	+	-	-

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #5575]	10644	+	+	+	+	+	+	-	-	-	-	-	+	+	-	+	+	-	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
[Ref.: #49870]	6079	+	+	+	+	+	+	-	-	-	-	-	+	+	-	+	+	-	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Information on possible application of the strain and its possible interaction with e.g. potential hostsSafety information

[Ref.: #5575]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassSequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5575]	Salmonella enterica subsp. diarizonae strain DSM 14847 16S ribosomal RNA gene, partial sequence	EU014688	1368	ENA	59204 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae NCTC10381	GCA_900478155	complete	GenBank	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae HZS154	GCA_002794415	complete	GenBank	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae 16-SA00356	GCA_004126495	complete	GenBank	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae 11-01853	GCA_001629755	complete	GenBank	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae 11-01855	GCA_001628755	complete	GenBank	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae 11-01854	GCA_001629775	complete	GenBank	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae CCUG 30040T	GCA_008692785	contig	GenBank	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae SBO13	GCA_003668835	scaffold	GenBank	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae SBO27	GCA_003668815	scaffold	GenBank	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae 50267	GCA_001276875	contig	GenBank	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae 50268	GCA_001276795	contig	GenBank	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae NCTC12417	GCA_900706825	contig	GenBank	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae NCTC10060	GCA_900456375	contig	GenBank	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 11-01853	59204.13	complete	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 11-01853	59204.15	plasmid	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 11-01853	59204.16	plasmid	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 11-01854	59204.14	complete	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 11-01854	59204.18	plasmid	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 11-01854	59204.17	plasmid	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 11-01855	59204.12	complete	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 134005	59204.54	wgs	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 16-SA00356	59204.57	complete	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 266925	59204.56	wgs	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 313304	59204.51	wgs	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 491027	59204.55	wgs	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 50267	59204.11	wgs	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain 50268	59204.10	wgs	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain CCUG 30040T	59204.59	wgs	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain FDA00002234	59204.52	wgs	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain FDA00002235	59204.53	wgs	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain FMA0132	59204.50	wgs	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain HZS154	59204.19	complete	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain NCTC10060	59204.31	wgs	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain NCTC10381	59204.26	complete	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain NCTC12417	59204.58	wgs	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain SBO13	59204.46	wgs	PATRIC	59204 tax ID
[Ref.: #66792]	Salmonella enterica subsp. diarizonae strain SBO27	59204.45	wgs	PATRIC	59204 tax ID

Availability in culture collectionsExternal links

[Ref.: #5575]

Culture collection no.

CCUG 30040, DSM 14847, ATCC 43973, CIP 82.31, NCTC 10060

[Ref.: #20218]

Associated Passport(s) in StrainInfo

303757, 121312, 229996, 121315

References

#5575

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14847

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#40232 ; Curators of the CIP;
#49870 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30040

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These References are textmined

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