Providencia rettgeri (DSM 46264, CNCTC Prr 15/61, IMET 10833)

Name: Providencia rettgeri (DSM 46264, CNCTC Prr 15/61, IMET 10833)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5079

Type strain

Strain Designation R6

Culture col. no. DSM 46264 CNCTC Prr 15/61 IMET 10833 R6 SG1333 1 more

NCBI tax ID(s) 587

Special Collections DSMZ JMRC

History DSMZ <- IMET <- CNCTC, Prr 15/61 <- S. Namioka <- R. Sakazaki, R6

Links

Providencia rettgeri R6 is a bacterium of the family Morganellaceae.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 50791

DSM 46264,IMET 10833

@ref 20215

Last LPSN update 2026-05-29 08:26:05

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Morganellaceae

Genus Providencia

Species Providencia rettgeri

Full scientific name Providencia rettgeri (Hadley et al. 1918) Brenner et al. 1978 (Approved Lists 1980)

Synonyms (3)

Proteus rettgeri
"Rettgerella rettgeri"
"Bacterium rettgeri"

BacDive ID	Other strains from **Providencia rettgeri** (21)	Type strain
5078	P. rettgeri 1163, DSM 4542, ATCC 29944, CCUG 14804, CECT ... (type strain)
5077	P. rettgeri KB 772, DSM 1131, NCTC 7481
5080	P. rettgeri DSM 46592, IMET 10189
134606	P. rettgeri B-0043, CIP 107053
135105	P. rettgeri 4.68, CIP 69.25
135232	P. rettgeri 30829/50, CIP 53.182
135405	P. rettgeri 1.69, CIP 69.24
135659	P. rettgeri 1.65, CIP 69.26
135905	P. rettgeri CIP 53.180
137278	P. rettgeri 1202/48, CIP 53.181
141200	P. rettgeri CCUG 166
141219	P. rettgeri CCUG 237 A
141417	P. rettgeri CCUG 1649, CCM 5618
144181	P. rettgeri CCUG 23362
152477	P. rettgeri CCUG 46898
153677	P. rettgeri CCUG 50627
154121	P. rettgeri CCUG 52439
155340	P. rettgeri CCUG 57382
173529	P. rettgeri CIMB 04-4495, CRBIP17.136
179080	P. rettgeri IMET 10191, STI10191
179081	P. rettgeri IMET 10209, STI10209

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	98.985
125439	negative	97.741

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
12500	CASO AGAR (MERCK 105458) (DSMZ Medium 220)		Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
12500	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	91.077

Spore formation

@ref	Spore formation	Confidence
125439		99.95

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
12500	2	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
124043	ASM1904854v1 assembly for Providencia rettgeri FDAARGOS 1451	complete	GCA_019048545	587.337	587	96.81

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1904854v1 assembly for Providencia rettgeri FDAARGOS 1451
NCBI: GCA_019048545

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	91.08	no
125439	gram_stain	BacteriaNetⓘ	negative	97.74	no
125439	motility	BacteriaNetⓘ	no	63.09	no
125439	spore_formation	BacteriaNetⓘ	no	99.95	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Providencia rettgeri strain FDAARGOS 1451 strain Not applicable
PATRIC: 587.337

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.99	no
125438	anaerobic	anaerobicⓘ	no	96.24	no
125438	spore-forming	spore-formingⓘ	no	88.20	no
125438	aerobic	aerobicⓘ	no	63.45	no
125438	thermophilic	thermophileⓘ	no	100.00	yes
125438	flagellated	motile2+ⓘ	yes	71.53	no

Literature

References

#12500	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46264
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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