Proteus mirabilis (DSM 4479, ATCC 29906, CIP 103181)

Name: Proteus mirabilis (DSM 4479, ATCC 29906, CIP 103181)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5058

Type strain

Strain Designation PR 14

Culture col. no. DSM 4479 ATCC 29906 CIP 103181 NCTC 11938 WDCM 00023 9 more

NCBI tax ID(s) 525369 584

Special Collections DSMZ CCUG JCM KCTC CIP

History DSMZ <- ATCC; ATCC 29906 <- CDC, Atlanta; CDC PR 14 JCM <-- R. Sakazaki 4030 <-- ATCC 29906 <-- CDC PR14. CIP <- 1988, ATCC <- CDC: strain PR 14

Links

Proteus mirabilis PR 14 is a facultative anaerobe, Gram-negative, motile human pathogen that has multiple antibiotic resistances.

antibiotic resistance Gram-negative motile rod-shaped facultative anaerobe human pathogen genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 14302

LMG 3257,ATCC 29906,CECT 4168,NCTC 11938,NBIMCC 8747,CCUG 26767,CCUG 34135,CIP 103181,DSM 4479,JCM 1669,CCRC 13991,KCTC 2566,CCM 7188,BCRC 13991

@ref 20215

Last LPSN update 2026-05-29 08:26:04

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Morganellaceae

Genus Proteus

Species Proteus mirabilis

Full scientific name Proteus mirabilis Hauser 1885 (Approved Lists 1980)

BacDive ID	Other strains from **Proteus mirabilis** (52)	Type strain
5057	P. mirabilis DSM 788, ATCC 14153, IMET 11232, CCUG 32232, ...
5059	P. mirabilis LRA 080173, LRA 008 01 73, DSM 6674, ATCC ...
5060	P. mirabilis D1, DSM 18254, ATCC 12453, CCUG 34293
5061	P. mirabilis D 799, DSM 30115, ATCC 9240
5062	P. mirabilis WS 10039, DSM 30116
5063	P. mirabilis BL 47, DSM 46227, IMET 10762, SG 654
5064	P. mirabilis DSM 50903, ATCC 15363, ICPB 2575
130994	P. mirabilis CD1-T1542, DSM 28629
131878	P. mirabilis PGVI, DSM 102257
131879	P. mirabilis PG 400, DSM 102258
134505	P. mirabilis CF 09, CIP 105872
134641	P. mirabilis 89-Hb, CIP 107283
135785	P. mirabilis O, CIP A233
135941	P. mirabilis B-0087, CIP 107052
136530	P. mirabilis PM1, CIP 106474
138072	P. mirabilis CIP 104588, Ip R1
138172	P. mirabilis CF 1709, CIP 105104
138505	P. mirabilis SS, CIP 75.15
139060	P. mirabilis CIP A235
139103	P. mirabilis AP 3, CIP 103800
139220	P. mirabilis 74.87, CIP 102817
139221	P. mirabilis 73.87, CIP 102818
141192	P. mirabilis CCUG 138
141666	P. mirabilis CCUG 4637
141668	P. mirabilis CCUG 4640, CCUG 18993
141669	P. mirabilis CCUG 4641
141670	P. mirabilis CCUG 4642, CCUG 18994
141672	P. mirabilis CCUG 4644, CCUG 18996
141673	P. mirabilis CCUG 4645
141674	P. mirabilis CCUG 4646, CCUG 18999
141676	P. mirabilis CCUG 4648
141677	P. mirabilis CCUG 4649, CCUG 19005
143412	P. mirabilis CCUG 19004
143413	P. mirabilis CCUG 19011
143414	P. mirabilis CCUG 19016
144509	P. mirabilis CCUG 25418
145699	P. mirabilis CCUG 29299
147545	P. mirabilis CCUG 33773, ATCC 29245
147577	P. mirabilis CCUG 33828
147821	P. mirabilis CCUG 34294, NCDC 2059-70, ATCC 25933
149015	P. mirabilis CCUG 36728
149086	P. mirabilis CCUG 36839
150125	P. mirabilis CCUG 39049
150288	P. mirabilis CCUG 39506, ATCC 7002
151282	P. mirabilis CCUG 43605
153329	P. mirabilis CCUG 49244
156661	P. mirabilis CCUG 63961
173180	P. mirabilis CIMB 05-1153, CRBIP17.135
174547	P. mirabilis 115002, DSM 115002
179113	P. mirabilis IMET 10794, STI10794
179147	P. mirabilis IMET 11109, STI11109
177885	P. mirabilis 10762, SF002753

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
120971	negative	rod-shaped
125438	negative			98.985

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
1692	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
1692	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
37129	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
1692	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
120971	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
1692	positive	growth	37
37129	positive	growth	30
67770	positive	growth	37
120971	positive	growth	5-41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
120971	facultative anaerobe
125439	facultative anaerobe	90.541

Antibiotic susceptibility testing

	Test 1	Test 2	Test 3	Test 4	Test 5
@ref	1692	1692	1692	1692	1692
Medium	Mueller-Hinton Agar	Mueller-Hinton Agar	Mueller-Hinton Agar	Mueller Hinton	Müller-Hinton Agar
Manual annotation	1	1	1	1	1
	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm	Inhibition zone diameter in mm
Amikacin 30µg (disc)	22	22-24	24	24	20
Ampicillin 10µg (disc)	30	28-30	28-30	28	20
Aztreonam 30µg (disc)	42-44	42-44	46	48	36
Bacitracin 10Unit	0	0	0	0	n.d.
Cefalotin 30µg (disc)	30	28-30	30	30	n.d.
Cefazolin 30µg (disc)	26	34-36	28	26-28	n.d.
Cefiderocol 30µg (disc)	n.d.	n.d.	n.d.	n.d.	26-28
Cefotaxime 30µg (disc)	44	42	44	46	34-36
Ceftazidime 10µg (disc)	n.d.	n.d.	n.d.	n.d.	28
Ceftriaxone 30µg (disc)	42	42	46	46	40
Chloramphenicol 30µg (disc)	20	22	20-22	24	0
Ciprofloxacin 5µg (disc)	n.d.	n.d.	n.d.	n.d.	42
Clindamycin 10µg (disc)	0	6	0	0	0
Colistin 10µg (disc)	0	0	0	0	n.d.
Colistin sulphate 10µg (disc)	n.d.	n.d.	n.d.	n.d.	0
Doxycycline 30µg (disc)	6	6	0	6	n.d.
Erythromycin 15µg (disc)	0	0	0	0	0
Fosfomycin 50µg (disc)	36-38	38-40	40	34	28
Gentamicin 10µg (disc)	20-22	22	22-24	22	n.d.
Gentamicin 30µg (disc)	n.d.	n.d.	n.d.	n.d.	22
Imipenem 10µg (disc)	32	32	32-34	34	28
Kanamycin 30µg (disc)	22	24	34	26	22
Levofloxacin 5µg (disc)	n.d.	n.d.	n.d.	n.d.	40
Lincomycin 15µg (disc)	0	0	0	0	n.d.
Linezolid 10µg (disc)	10-12	8	0	6	0
Meropenem 10µg (disc)	n.d.	n.d.	n.d.	n.d.	34
Mezlocillin 30µg (disc)	32	30	32	32	n.d.
Moxifloxacin 5µg (disc)	32	32	32	30-32	32
Neomycin 30µg (disc)	20-22	20-22	20	20	n.d.
Nitrofurantoin 100µg (disc)	8	8	10	10	0
Norfloxacin 10µg (disc)	40	40	40	42	n.d.
Nystatin 100Unit	0	0	0	10	n.d.
Ofloxacin 5µg (disc)	36-38	38	36-38	40	34-36
Oxacillin 5µg (disc)	0	0	0	0	6
Penicillin G 6µg (disc)	26	22	22	20	12
Pipemidic acid 20µg (disc)	0	26	26	28	n.d.
Piperacillin/Tazobactam 40µg (disc)	34	30-32	34	34	n.d.
Piperacillin/Tazobactam 110µg (disc)	n.d.	n.d.	n.d.	n.d.	26
Polymyxin B 300Unit	0	0	0	6	0
Quinupristin/Dalfopristin 15µg (disc)	0	0	0	0	0
Rifampicin 5µg (disc)	n.d.	n.d.	n.d.	n.d.	10
Teicoplanin 30µg (disc)	10	0	0	0	0
Tetracycline 30µg (disc)	12	8	8	6	8
Ticarcillin 75µg (disc)	36-38	38	38	38	28
Tigecycline 15µg (disc)	n.d.	n.d.	n.d.	n.d.	20
Trimethoprim-sulfamethoxazole (1:19) 10µg (disc)	n.d.	n.d.	n.d.	n.d.	22
Vancomycin 30µg (disc)	0	0	0	0	0

Spore formation

@ref	Spore formation	Confidence
125439		99.23

Compound production

1692

Compoundvolatile organic compounds

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68368	27613 ChEBI	amygdalin	-	fermentation	from API 20E
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
120971	16947 ChEBI	citrate	+	carbon source
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
68368	17634 ChEBI	D-glucose	+	fermentation	from API 20E
68368	16899 ChEBI	D-mannitol	-	fermentation	from API 20E
68368	5291 ChEBI	gelatin	+	hydrolysis	from API 20E
120971	17234 ChEBI	glucose	+	degradation
68368	30849 ChEBI	L-arabinose	-	fermentation	from API 20E
68368	62345 ChEBI	L-rhamnose	-	fermentation	from API 20E
120971	17716 ChEBI	lactose	-	fermentation
68368	25094 ChEBI	lysine	-	degradation	from API 20E
120971	15792 ChEBI	malonate	-	assimilation
120971	29864 ChEBI	mannitol	-	fermentation
68368	28053 ChEBI	melibiose	-	fermentation	from API 20E
68368	17268 ChEBI	myo-inositol	-	fermentation	from API 20E
120971	17632 ChEBI	nitrate	+	reduction
120971	16301 ChEBI	nitrite	-	reduction
68368	18257 ChEBI	ornithine	+	degradation	from API 20E
120971	132112 ChEBI	sodium thiosulfate	+	builds gas from
68368	30911 ChEBI	sorbitol	-	fermentation	from API 20E
68368	16199 ChEBI	urea	+	hydrolysis	from API 20E

Antibiotic resistance

@ref	ChEBI	Metabolite	Resistance conc.
120971		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
1692	28669	Bacitracin	10 Unit	from Antibiotic test
1692	37943	Colistin	10 µg (disc)	from Antibiotic test
1692	37943	Colistin sulphate	10 µg (disc)	from Antibiotic test
1692	48923	Erythromycin	15 µg (disc)	from Antibiotic test
1692	6472	Lincomycin	15 µg (disc)	from Antibiotic test
1692		Quinupristin/Dalfopristin	15 µg (disc)	from Antibiotic test
1692	28001	Vancomycin	30 µg (disc)	from Antibiotic test

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
120971	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
120971	15688 ChEBI	acetoin	-
68368	15688 ChEBI	acetoin	-		from API 20E
120971	17234 ChEBI	glucose		+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
120971	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68382	beta-galactosidase	-	3.2.1.23	from API zym
120971	beta-galactosidase	-	3.2.1.23
68368	beta-galactosidase	-	3.2.1.23	from API 20E
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120971	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68368	cytochrome oxidase	-	1.9.3.1	from API 20E
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	-		from API zym
120971	gelatinase	-
68368	gelatinase	+		from API 20E
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
120971	lysine decarboxylase	-	4.1.1.18
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
120971	ornithine decarboxylase	+	4.1.1.17
68368	ornithine decarboxylase	+	4.1.1.17	from API 20E
120971	oxidase	-
120971	phenylalanine ammonia-lyase	+	4.3.1.24
68382	trypsin	+	3.4.21.4	from API zym
120971	tryptophan deaminase	+
68368	tryptophan deaminase	+	4.1.99.1	from API 20E
120971	urease	+	3.5.1.5
68368	urease	+	3.5.1.5	from API 20E
68382	valine arylamidase	+		from API zym

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
1692	-	-	-	+	+	+	+	+	-	-	+	+	-	-	-	-	+/-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
1692	-	-	-	+	+	+	+	+	+/-	-	+	+	-	-	-	-	-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120971	-	+	+	-	-	+	+	-	+	-	+	+	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
120971	not determinedn.d.	+	-	+	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	+	-	-	+	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	+	+	+	-	-	-	-	-	-	-	-	+	+	+	+	+	+	-	-	-	+

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity animal	Biosafety level	Biosafety level comment
1692			2	Risk group (German classification) According to TRBA 466
120971			2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM16075v1 assembly for Proteus mirabilis ATCC 29906	scaffold	GCA_000160755	525369.4	643886024	525369	55.4
66792	31530_D01 assembly for Proteus mirabilis NCTC11938	contig	GCA_900455245	584.639	8117549425	584	21.57

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Proteus mirabilis strain ATCC 29906 16S ribosomal RNA gene, partial sequence	AF008582	1497	584
20218	Proteus mirabilis 16S rRNA gene, strain CIP103181T	AJ301682	1503	584
20218	Proteus vulgaris 16S rRNA gene, strain CIP103181T	AJ301683	1505	585
20218	Proteus mirabilis gene for 16S rRNA, partial sequence, strain: JCM 1669	AB626123	1465	584
1692	Proteus mirabilis strain NCTC 11938 16S ribosomal RNA gene, partial sequence	DQ885256	1503	584
67770	Proteus mirabilis gene for 16S ribosomal RNA, partial sequence, strain: JCM 1669	LC060912	1484	584
124043	Proteus mirabilis gene for 16S rRNA, partial sequence, strain: NBRC 105697.	AB682270	1468	584
124043	Proteus mirabilis strain JCM 1669 16S ribosomal RNA gene, partial sequence.	OM387005	1102	584
124043	Proteus mirabilis strain NCTC 11938 16S ribosomal RNA gene, partial sequence.	OR335267	982	584
124043	Proteus mirabilis strain ATCC 29906(T) 16S ribosomal RNA gene, partial sequence.	PP340489	1508	584
124043	Proteus mirabilis strain ATCC 29906 16S ribosomal RNA gene, partial sequence.	MN749810	1393	584
124043	Proteus mirabilis strain ATCC 29906 16S ribosomal RNA gene, partial sequence.	MK185038	634	584
124043	Proteus mirabilis strain ATCC 29906 16S ribosomal RNA gene, partial sequence.	PP665703	273	584
124043	Proteus mirabilis strain BIU GLSF8 16S ribosomal RNA gene, partial sequence.	MN544215	410	584
124043	Proteus mirabilis strain NCTC 11938 16S ribosomal RNA gene, partial sequence.	MN749808	1497	584
124043	Proteus mirabilis strain NCTC 11938 16S ribosomal RNA gene, partial sequence.	MN326692	1408	584
124043	Proteus mirabilis strain JCM 1669 16S ribosomal RNA gene, partial sequence.	MK185039	797	584
124043	Proteus mirabilis strain JCM 1669 16S ribosomal RNA gene, partial sequence.	PQ216313	1375	584

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM16075v1 assembly for Proteus mirabilis ATCC 29906
BV-BRC: 525369.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	90.54	no
125439	gram_stain	BacteriaNetⓘ	negative	86.68	no
125439	motility	BacteriaNetⓘ	no	78.69	no
125439	spore_formation	BacteriaNetⓘ	no	99.23	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Proteus mirabilis ATCC 29906
PATRIC: 525369.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.99	no
125438	anaerobic	anaerobicⓘ	no	91.24	yes
125438	spore-forming	spore-formingⓘ	no	89.98	no
125438	aerobic	aerobicⓘ	no	74.23	yes
125438	thermophilic	thermophileⓘ	no	98.70	yes
125438	flagellated	motile2+ⓘ	yes	73.92	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Establishment of a Real-Time PCR Assay for the Detection of Devriesea agamarum in Lizards.	Brockmann M, Leineweber C, Hellebuyck T, Martel A, Pasmans F, Gentil M, Muller E, Marschang RE.	Animals (Basel)	10.3390/ani13050881	2023
	Pathogen exclusion from intestinal mucus and antimicrobial susceptibility of Bifidobacterium spp. strains from fecal donors.	Ronkainen A, Khan I, Satokari R.	Microbiome Res Rep	10.20517/mrr.2024.43	2025
	Exploring Trimethylaminuria: Genetics and Molecular Mechanisms, Epidemiology, and Emerging Therapeutic Strategies.	Sidoti A, D'Angelo R, Castagnetti A, Viciani E, Scimone C, Alibrandi S, Giannini G.	Biology (Basel)	10.3390/biology13120961	2024
	In vitro conjugation kinetics of AmpC, broad spectrum and extended-spectrum beta-lactamase-producing Escherichia coli donors and various Enterobacteriaceae recipients.	Saliu EM, Zentek J, Vahjen W.	BMC Microbiol	10.1186/s12866-020-01787-7	2020
	A Method to Determine the Efficacy of a Commercial Phage Preparation against Uropathogens in Urine and Artificial Urine Determined by Isothermal Microcalorimetry.	Sigg AP, Mariotti M, Grutter AE, Lafranca T, Leitner L, Bonkat G, Braissant O.	Microorganisms	10.3390/microorganisms10050845	2022
	Microfluidic One-Pot Digital Droplet FISH Using LNA/DNA Molecular Beacons for Bacteria Detection and Absolute Quantification.	Kao YT, Calabrese S, Borst N, Lehnert M, Lai YK, Schlenker F, Juelg P, Zengerle R, Garstecki P, von Stetten F.	Biosensors (Basel)	10.3390/bios12040237	2022
	Headspace analyses using multi-capillary column-ion mobility spectrometry allow rapid pathogen differentiation in hospital-acquired pneumonia relevant bacteria.	Kunze-Szikszay N, Euler M, Kuhns M, Thiess M, Gross U, Quintel M, Perl T.	BMC Microbiol	10.1186/s12866-021-02102-8	2021
Metabolism	Methodological considerations for the identification of choline and carnitine-degrading bacteria in the gut.	Jameson E, Quareshy M, Chen Y.	Methods	10.1016/j.ymeth.2018.03.012	2018
	Antimicrobial Peptides from Rat-Tailed Maggots of the Drone Fly Eristalis tenax Show Potent Activity against Multidrug-Resistant Gram-Negative Bacteria.	Hirsch R, Wiesner J, Bauer A, Marker A, Vogel H, Hammann PE, Vilcinskas A.	Microorganisms	10.3390/microorganisms8050626	2020
	Rapid Detection of Pathogens in Wound Exudate via Nucleic Acid Lateral Flow Immunoassay.	Brunauer A, Verboket RD, Kainz DM, von Stetten F, Fruh SM.	Biosensors (Basel)	10.3390/bios11030074	2021
Metabolism	Modulation of Peptidoglycan Synthesis by Recycled Cell Wall Tetrapeptides.	Hernandez SB, Dorr T, Waldor MK, Cava F.	Cell Rep	10.1016/j.celrep.2020.107578	2020
	Establishment and Validation of a Two-Step LAMP Assay for Detection of Bacillus cereus-Group Isolates in Food and Their Possibility of Non-haemolytic Enterotoxin Production.	Busch A, Schotte U, Jessberger N, Frentzel H, Plotz M, Abdulmawjood A.	Front Microbiol	10.3389/fmicb.2022.930648	2022
	Chicken Skin Decontamination of Thermotolerant Campylobacter spp. and Hygiene Indicator Escherichia coli Assessed by Viability Real-Time PCR.	Wulsten IF, Thieck M, Gohler A, Schuh E, Stingl K.	Pathogens	10.3390/pathogens11060706	2022
Phylogeny	Clear distinction between Burkholderia mallei and Burkholderia pseudomallei using fluorescent motB primers.	Schmoock G, Elschner M, Sprague LD.	Acta Vet Scand	10.1186/s13028-015-0104-4	2015
Enzymology	A novel, nested, multiplex, real-time PCR for detection of bacteria and fungi in blood.	Gosiewski T, Jurkiewicz-Badacz D, Sroka A, Brzychczy-Wloch M, Bulanda M.	BMC Microbiol	10.1186/1471-2180-14-144	2014
Enzymology	Ion mobility spectrometry for microbial volatile organic compounds: a new identification tool for human pathogenic bacteria.	Junger M, Vautz W, Kuhns M, Hofmann L, Ulbricht S, Baumbach JI, Quintel M, Perl T.	Appl Microbiol Biotechnol	10.1007/s00253-012-3924-4	2012
	Synthetic studies of cystobactamids as antibiotics and bacterial imaging carriers lead to compounds with high in vivo efficacy.	Testolin G, Cirnski K, Rox K, Prochnow H, Fetz V, Grandclaudon C, Mollner T, Baiyoumy A, Ritter A, Leitner C, Krull J, van den Heuvel J, Vassort A, Sordello S, Hamed MM, Elgaher WAM, Herrmann J, Hartmann RW, Muller R, Bronstrup M.	Chem Sci	10.1039/c9sc04769g	2019
	Optimization of the Central alpha-Amino Acid in Cystobactamids to the Broad-Spectrum, Resistance-Breaking Antibiotic CN-CC-861.	Kohnhauser D, Seedorf T, Cirnski K, Heimann D, Coetzee J, Sordello S, Richter J, Stappert M, Sabuco JF, Corbett D, Bacque E, Rox K, Herrmann J, Vassort A, Muller R, Kirschning A, Bronstrup M.	J Med Chem	10.1021/acs.jmedchem.4c00927	2024
	Comparison of Mast Burkholderia Cepacia, Ashdown + Gentamicin, and Burkholderia Pseudomallei Selective Agar for the Selective Growth of Burkholderia Spp.	Edler C, Derschum H, Kohler M, Neubauer H, Frickmann H, Hagen RM.	Eur J Microbiol Immunol (Bp)	10.1556/1886.2016.00037	2017
Enzymology	DNA microarray-based detection of Coxiella burnetii, the causative agent of Q fever.	Schmoock G, Ehricht R, Sprague LD.	Acta Vet Scand	10.1186/1751-0147-56-27	2014
	Development of a Droplet Digital Polymerase Chain Reaction for Rapid and Simultaneous Identification of Common Foodborne Pathogens in Soft Cheese.	Cremonesi P, Cortimiglia C, Picozzi C, Minozzi G, Malvisi M, Luini M, Castiglioni B.	Front Microbiol	10.3389/fmicb.2016.01725	2016
	Validation of a novel real-time PCR for detecting Rasamsonia argillacea species complex in respiratory secretions from cystic fibrosis patients.	Steinmann J, Giraud S, Schmidt D, Sedlacek L, Hamprecht A, Houbraken J, Meis JF, Bouchara JP, Buer J, Rath PM.	New Microbes New Infect	10.1002/nmi2.44	2014
Genetics	Diversity of Vibrio navarrensis Revealed by Genomic Comparison: Veterinary Isolates Are Related to Strains Associated with Human Illness and Sewage Isolates While Seawater Strains Are More Distant.	Schwartz K, Kukuc C, Bier N, Taureck K, Hammerl JA, Strauch E.	Front Microbiol	10.3389/fmicb.2017.01717	2017
Phylogeny	A rapid culture independent methodology to quantitatively detect and identify common human bacterial pathogens associated with contaminated high purity water.	Minogue E, Tuite NL, Smith CJ, Reddington K, Barry T.	BMC Biotechnol	10.1186/s12896-015-0124-1	2015
Phylogeny	Novel real-time PCR assay for simultaneous detection and differentiation of Clostridium chauvoei and Clostridium septicum in clostridial myonecrosis.	Halm A, Wagner M, Kofer J, Hein I.	J Clin Microbiol	10.1128/jcm.01975-09	2010
Enzymology	Evaluation of a novel real-time PCR test based on the ssrA gene for the identification of group B streptococci in vaginal swabs.	Wernecke M, Mullen C, Sharma V, Morrison J, Barry T, Maher M, Smith T.	BMC Infect Dis	10.1186/1471-2334-9-148	2009
Enzymology	Comparison of hand-held test kits, immunofluorescence microscopy, enzyme-linked immunosorbent assay, and flow cytometric analysis for rapid presumptive identification of Yersinia pestis.	Tomaso H, Thullier P, Seibold E, Guglielmo V, Buckendahl A, Rahalison L, Neubauer H, Scholz HC, Splettstoesser WD.	J Clin Microbiol	10.1128/jcm.00458-07	2007
	Isolation and characterization of biofilm-disrupting proteus phage Premi.	Valencia-Toxqui G, Sugumar S, Ramsey J.	Sci Rep	10.1038/s41598-025-23545-3	2025
	Extraction, characterization and evaluation of antimicrobial activity of chitosan from adult Zophobas morio (Fabricius, 1776) (Coleoptera: Tenebrionidae).	Keerthika K, Jayakumar M.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.135188	2024
Genetics	Genomic Insights of Emerging Multidrug-Resistant OXA-48-Producing ST135 Proteus mirabilis	Mavroidi A, Froukala E, Spanakis N, Michelaki A, Orfanidou M, Koumaki V, Tsakris A.	Antibiotics (Basel)		2025
	Proteus mirabilis from Captive Giant Pandas and Red Pandas Carries Diverse Antimicrobial Resistance Genes and Virulence Genes Associated with Mobile Genetic Elements	Yang Y, Liu Y, Wang J, Li C, Wu R, Xin J, Yang X, Zheng H, Zhong Z, Fu H, Zhou Z, Liu H, Peng G.	Microorganisms		2025
	Multidrug-resistant Proteus mirabilis in a critically endangered Malayan pangolin: clinical and genomic insights.	Chen Z, Wang J, Wang K, An F, Liu S, Yan H, Hua Y.	Front Vet Sci	10.3389/fvets.2025.1552499	2025
	Adjustment in the Composition and Organization of Proteus mirabilis Lipids during the Swarming Process	Stolarek P, Bernat P, Rozalski A.	Int J Mol Sci		2023
	The Detection of Extensively Drug-Resistant Proteus mirabilis Strains Harboring Both VIM-4 and VIM-75 Metallo-beta-Lactamases from Patients in Germany.	Fritzenwanker M, Falgenhauer J, Hain T, Imirzalioglu C, Chakraborty T, Yao Y.	Microorganisms	10.3390/microorganisms13020266	2025
	Combined Application of Aminoglycosides and Ascorbic Acid in the Elimination of Proteus mirabilis Rods Responsible for Causing Catheter-Associated Urinary Tract Infections (CAUTIs)-A Molecular Approach.	Stolarek P, Bernat P, Rozalski A.	Int J Mol Sci	10.3390/ijms232113069	2022
	Frequency of drug-resistant bacterial isolates among pregnant women with UTI in maternity and children's hospital, Bisha, Saudi Arabia.	Al-Shahrani GS, Belali TM.	Sci Rep	10.1038/s41598-024-58275-5	2024
	Plant-based synthesis of silver nanoparticles using aqueous leaf extracts of Cinchona calisaya Wedd. and Cinchona pubescens Vahl: physicochemical characterisation and biological activities.	Safari JB, Ushindi VS, Andema FC, Hamuli PM, Irenge EB, Vuangi BM, Zola EN, Baraka BK, Bilamirwa CM, Matabaro VM, Angbongbo FP, Nsabatien V, Zanga J, Metelo EM, Krause RWM, Balciunaitiene A, Memvanga PB.	Discov Nano	10.1186/s11671-025-04326-3	2025
Metabolism	Phospholipids and Fatty Acids Affect the Colonization of Urological Catheters by Proteus mirabilis.	Stolarek P, Bernat P, Szczerbiec D, Rozalski A.	Int J Mol Sci	10.3390/ijms22168452	2021
	3,3-Dimethyl-1-Butanol and its Metabolite 3,3-Dimethylbutyrate Ameliorate Collagen-induced Arthritis Independent of Choline Trimethylamine Lyase Activity.	Fechtner S, Allen BE, Chriswell ME, Jubair WK, Robertson CE, Kofonow JN, Frank DN, Holers VM, Kuhn KA.	Inflammation	10.1007/s10753-024-02126-y	2025
	Metabolomic Profiling, Antibacterial, and Molluscicidal Properties of the Medicinal Plants Calotropis procera and Atriplex halimus: In Silico Molecular Docking Study.	Morad MY, El-Sayed H, El-Khadragy MF, Abdelsalam A, Ahmed EZ, Ibrahim AM.	Plants (Basel)	10.3390/plants12030477	2023
	A Small-Molecule Inhibitor of Gut Bacterial Urease Protects the Host from Liver Injury.	Richards-Corke KC, Jiang Y, Yeliseyev V, Zhang Y, Franzosa EA, Wang ZA, Yapa Abeywardana M, Cole PA, Huttenhower C, Bry L, Balskus EP.	ACS Chem Biol	10.1021/acschembio.3c00556	2025
	Acetylcholine Esterase Inhibitory Effect, Antimicrobial, Antioxidant, Metabolomic Profiling, and an In Silico Study of Non-Polar Extract of The Halotolerant Marine Fungus Penicillium chrysogenum MZ945518.	El-Sayed H, Hamada MA, Elhenawy AA, Sonbol H, Abdelsalam A.	Microorganisms	10.3390/microorganisms11030769	2023
	An Arsenal of Multiple Antimicrobial Resistance, Toxins, and Virulence Factors in Gram-Negative Bacterial Isolates from Food - A Formidable Combination!	Alemu A, Girma S, Mariam SH.	Infect Drug Resist	10.2147/idr.s391072	2023
	Phytochemical characterization, antimicrobial properties and in silico modeling perspectives of Anacyclus pyrethrum essential oil.	Baz AE, Mrabti HN, Ashmawy NS, Khan SA, Abdallah EM, Al-Mijalli SH, Alenazy R, Alshabrmi FM, Bouyahya A, El Hachlafi N, Ardianto C, Ifadotunnikmah F, Hmimid F.	Heliyon	10.1016/j.heliyon.2024.e35079	2024
	Rapid, low-cost colorimetric detection of Salmonella Typhi bacteriophages for environmental surveillance.	da Silva KE, Yokoyama T, Naga SR, Maharjan M, Pereira Dos Santos PC, Fisher KN, Coulibaly JT, Yang MZ, Nelson EJ, Charles RC, Shafer K, Igiraneza B-L, Yusuf S, Mulder E, Neuzil K, Bogoch II, Shrestha R, Tamrakar D, Andrews JR.	mBio	10.1128/mbio.01963-25	2025
	Rapid label-free identification of seven bacterial species using microfluidics, single-cell time-lapse phase-contrast microscopy, and deep learning-based image and video classification.	Hallstrom E, Kandavalli V, Wahlby C, Hast A.	PLoS One	10.1371/journal.pone.0330265	2025
	Characterization of Increased Extracellular Vesicle-Mediated Tigecycline Resistance in Acinetobacter baumannii.	Cho H, Sondak T, Kim KS.	Pharmaceutics	10.3390/pharmaceutics15041251	2023
	Proteus mirabilis Employs a Contact-Dependent Killing System against Competing Enterobacteriaceae.	Kiani D, Santus W, Kiernan KA, Behnsen J.	mSphere	10.1128/msphere.00321-21	2021
	Solanum elaeagnifolium Var. Obtusifolium (Dunal) Dunal: Antioxidant, Antibacterial, and Antifungal Activities of Polyphenol-Rich Extracts Chemically Characterized by Use of In Vitro and In Silico Approaches.	Bouslamti M, Metouekel A, Chelouati T, El Moussaoui A, Barnossi AE, Chebaibi M, Nafidi HA, Salamatullah AM, Alzahrani A, Aboul-Soud MAM, Bourhia M, Lyoussi B, Benjelloun AS.	Molecules	10.3390/molecules27248688	2022
	Formulating co-loaded nanoliposomes with gallic acid and quercetin for enhanced cancer therapy.	Al-Samydai A, Al Qaraleh M, Al Azzam KM, Mayyas A, Nsairat H, Abu Hajleh MN, Al-Halaseh LK, Al-Karablieh N, Akour A, Alshaik F, Alshaer W.	Heliyon	10.1016/j.heliyon.2023.e17267	2023
	Preparation of Surface-Reinforced Superabsorbent Polymer Hydrogel Microspheres via Incorporation of In Situ Synthesized Silver Nanoparticles.	Kim S, Kim M, Koh WG.	Polymers (Basel)	10.3390/polym13060902	2021
	From Synthesis to Functionality: Tailored Ionic Liquid-Based Electrospun Fibers with Superior Antimicrobial Properties.	Rackov S, Pilic B, Jankovic N, Kosanic M, Petkovic M, Vranes M.	Polymers (Basel)	10.3390/polym16152094	2024
	Design, synthesis, antimicrobial activity, stability, and mechanism of action of bioresorbable ceragenins.	Gubler S, Zaugg A, Yi R, Sherren E, Milner E, Conyer W, May T, Jack T, Heaton T, Christopherson J, Higbee P, Powers E, Takara M, Linder A, Boyack B, Pauga F, Salmon M, Thomas M, Shiraki M, Deng S, Savage PB.	RSC Med Chem	10.1039/d4md00990h	2025
	Comprehensive analysis of different solvent extracts of Ferula communis L. fruit reveals phenolic compounds and their biological properties via in vitro and in silico assays.	Nouioura G, El Fadili M, El Barnossi A, Loukili EH, Laaroussi H, Bouhrim M, Giesy JP, Aboul-Soud MAM, Al-Sheikh YA, Lyoussi B, Derwich EH.	Sci Rep	10.1038/s41598-024-59087-3	2024
Enzymology	Two distinct gut microbial pathways contribute to meta-organismal production of phenylacetylglutamine with links to cardiovascular disease.	Zhu Y, Dwidar M, Nemet I, Buffa JA, Sangwan N, Li XS, Anderson JT, Romano KA, Fu X, Funabashi M, Wang Z, Keranahalli P, Battle S, Tittle AN, Hajjar AM, Gogonea V, Fischbach MA, DiDonato JA, Hazen SL.	Cell Host Microbe	10.1016/j.chom.2022.11.015	2023
	Microbial assimilatory sulfate reduction-mediated H₂S: an overlooked role in Crohn's disease development.	Luo W, Zhao M, Dwidar M, Gao Y, Xiang L, Wu X, Medema MH, Xu S, Li X, Schafer H, Chen M, Feng R, Zhu Y.	Microbiome	10.1186/s40168-024-01873-2	2024
	Exploring the antimicrobial and antibiofilm potency of four essential oils against selected human pathogens using in vitro and in silico approaches.	Qureshi KA, Parvez A, Ismatullah H, Almahasheer H, Al Rugaie O.	PLoS One	10.1371/journal.pone.0315663	2025
	Complete Genome Sequence of Proteus mirabilis Siphophage Saba.	Nguyen J, Harb L, Moreland R, Liu M, Gill JJ, Ramsey J.	Microbiol Resour Announc	10.1128/mra.01094-19	2019
	Public questions spur the discovery of new bacterial species associated with lignin bioconversion of industrial waste.	Mathews SL, Epps MJ, Blackburn RK, Goshe MB, Grunden AM, Dunn RR.	R Soc Open Sci	10.1098/rsos.180748	2019
	Phytochemical Analysis and Biological Activity of Three Stachys Species (Lamiaceae) from Romania.	Stegarus DI, Lengyel E, Apostolescu GF, Botoran OR, Tanase C, Tanase C.	Plants (Basel)	10.3390/plants10122710	2021
Genetics	Genomic revisitation and reclassification of the genus Providencia.	Dong X, Jia H, Yu Y, Xiang Y, Zhang Y.	mSphere	10.1128/msphere.00731-23	2024
	Antimicrobial Activity of Red Alga Flour (Gelidium sp.) and Its Effect on Quality Retention of Scomber scombrus during Refrigerated Storage.	Miranda JM, Trigo M, Barros-Velazquez J, Aubourg SP.	Foods	10.3390/foods11070904	2022
Genetics	Genome sequencing and analysis of the first spontaneous Nanosilver resistant bacterium Proteus mirabilis strain SCDR1.	Saeb ATM, Al-Rubeaan KA, Abouelhoda M, Selvaraju M, Tayeb HT.	Antimicrob Resist Infect Control	10.1186/s13756-017-0277-x	2017
Enzymology	Antagonist Targeting the Species-Specific Fatty Acid Dehydrogenase/Isomerase FabX for Anti-H. pylori Infection.	Zhang L, Ruan X, Hang X, Heng D, Cai C, Zeng L, Zhang G, Zhou L, Bi H, Zhang L.	Adv Sci (Weinh)	10.1002/advs.202414844	2025
	Detection of Salmonella Typhi bacteriophages in surface waters as a scalable approach to environmental surveillance.	Shrestha S, Da Silva KE, Shakya J, Yu AT, Katuwal N, Shrestha R, Shakya M, Shahi SB, Naga SR, LeBoa C, Aiemjoy K, Bogoch II, Saha S, Tamrakar D, Andrews JR.	PLoS Negl Trop Dis	10.1371/journal.pntd.0011912	2024
	Preliminary Evaluation of the Safety and Probiotic Potential of Akkermansia muciniphila DSM 22959 in Comparison with Lactobacillus rhamnosus GG.	Cozzolino A, Vergalito F, Tremonte P, Iorizzo M, Lombardi SJ, Sorrentino E, Luongo D, Coppola R, Di Marco R, Succi M.	Microorganisms	10.3390/microorganisms8020189	2020
	Rapid antibiotic susceptibility testing and species identification for mixed samples.	Kandavalli V, Karempudi P, Larsson J, Elf J.	Nat Commun	10.1038/s41467-022-33659-1	2022
Genetics	Characterization and complete genome sequence of Privateer, a highly prolate Proteus mirabilis podophage.	Corban JE, Ramsey J.	PeerJ	10.7717/peerj.10645	2021
	Essential Oils as Green Antibacterial Modifiers of Polymeric Materials.	Majewska-Smolarek K, Kowalewska A.	Polymers (Basel)	10.3390/polym17212924	2025
	Screening of novel narrow-spectrum benzofuroxan derivatives for the treatment of multidrug-resistant tuberculosis through in silico, in vitro, and in vivo approaches.	Campos DL, Canales CSC, Demarqui FM, Fernandes GFS, Dos Santos CG, Prates JLB, da Silva IGM, Barros-Cordeiro KB, Bao SN, de Andrade LN, Abichabki N, Zacharias LV, de Campos MMA, Dos Santos JL, Pavan FR.	Front Microbiol	10.3389/fmicb.2024.1487829	2024
	In Vitro Assessment of Bio-Functional Properties from Lactiplantibacillus plantarum Strains.	Letizia F, Albanese G, Testa B, Vergalito F, Bagnoli D, Di Martino C, Carillo P, Verrillo L, Succi M, Sorrentino E, Coppola R, Tremonte P, Lombardi SJ, Di Marco R, Iorizzo M.	Curr Issues Mol Biol	10.3390/cimb44050158	2022
Genetics	GC-MS Analysis of Potentially Volatile Compounds of Pleurotus ostreatus Polar Extract: In vitro Antimicrobial, Cytotoxic, Immunomodulatory, and Antioxidant Activities.	Hamad D, El-Sayed H, Ahmed W, Sonbol H, Ramadan MAH.	Front Microbiol	10.3389/fmicb.2022.834525	2022
Pathogenicity	Sol-gel based synthesis and biological properties of zinc integrated nano bioglass ceramics for bone tissue regeneration.	Paramita P, Ramachandran M, Narashiman S, Nagarajan S, Sukumar DK, Chung TW, Ambigapathi M.	J Mater Sci Mater Med	10.1007/s10856-020-06478-3	2021
	Potent, Broad-Spectrum Antimicrobial Effects of S-Nitroso-N-acetylpenicillamine-Impregnated Nitric Oxide-Releasing Latex Urinary Catheters.	Douglass M, Ghalei S, Brisbois E, Handa H.	ACS Appl Bio Mater	10.1021/acsabm.1c01130	2022
	Loureirin A is a narrow-spectrum antimicrobial agent against Helicobacter pylori.	Tong Q, Yin C, Hang X, Bai Y, Zhang C, Xu J, Huang Y, Ge Y, Chen T, Zeng L, Jia J, Bi H.	Antimicrob Agents Chemother	10.1128/aac.00314-24	2024
	Cellulose Derived Graphene/Polyaniline Nanocomposite Anode for Energy Generation and Bioremediation of Toxic Metals via Benthic Microbial Fuel Cells.	Yaqoob AA, Yaqoob AA, Mohamad Ibrahim MN, Umar K, Bhawani SA, Khan A, Asiri AM, Khan MR, Azam M, AlAmmari AM.	Polymers (Basel)	10.3390/polym13010135	2020
Transcriptome	Selenite Reduction by Proteus sp. YS02: New Insights Revealed by Comparative Transcriptomics and Antibacterial Effectiveness of the Biogenic Se⁰ Nanoparticles.	Wang Y, Ye Q, Sun Y, Jiang Y, Meng B, Du J, Chen J, Tugarova AV, Kamnev AA, Huang S.	Front Microbiol	10.3389/fmicb.2022.845321	2022
	Tryptanthrin Reduces Campylobacter jejuni Colonization in the Chicken Gut by a Bactericidal Mechanism.	Iwata T, Watanabe-Yanai A, Tamamura-Andoh Y, Arai N, Akiba M, Kusumoto M.	Appl Environ Microbiol	10.1128/aem.01701-22	2023
Genetics	Draft Genome Sequences of Proteus mirabilis K1609 and K670: A Model Strains for Territoriality Examination.	Gmiter D, Czerwonka G, Drewnowska JM, Swiecicka I, Kaca W.	Curr Microbiol	10.1007/s00284-018-1598-6	2019
Enzymology	2-oxoglutarate:acceptor oxidoreductase-catalyzed redox cycling effectively targets coccoid forms of Helicobacter pylori.	Hang X, Lan W, Yanqiang H, Huang H, Zhang M, Zeng L, Shi T, Bai Y, Yang Z, Hu S, Wang J, Dong L, Tong Q, Jia J, Bi S, Xia Q, Gao Y, Bi H.	Nat Commun	10.1038/s41467-025-62477-4	2025
	Comparative In Vitro Study of Biofilm Formation and Antimicrobial Susceptibility in Gram-Negative Bacilli Isolated from Prosthetic Joint Infections.	Macias-Valcayo A, Aguilera-Correa JJ, Broncano A, Parron R, Aunon A, Garcia-Canete J, Blanco A, Esteban J.	Microbiol Spectr	10.1128/spectrum.00851-22	2022
	Evaluation of Salvia yangii Extract as a Promising Protective Raw Material Applied Topically to the Skin.	Michalak M, Zagorska-Dziok M, Zarnowiec P, Ostrozka-Cieslik A, Bocho-Janiszewska A, Stryjecka M, Dobros N, Kostrzewa D, Paradowska K.	Molecules	10.3390/molecules30173505	2025
	Botryllin, a Novel Antimicrobial Peptide from the Colonial Ascidian Botryllus schlosseri.	Franchi N, Ballarin L, Cima F.	Mar Drugs	10.3390/md21020074	2023
	Chemical Profiling, Antioxidant, and Antimicrobial Activity of Saudi Propolis Collected by Arabian Honey Bee (Apis mellifera jemenitica) Colonies.	ALaerjani WMA, Khan KA, Al-Shehri BM, Ghramh HA, Hussain A, Mohammed MEA, Imran M, Ahmad I, Ahmad S, Al-Awadi AS.	Antioxidants (Basel)	10.3390/antiox11071413	2022
Enzymology	In Vitro and In Silico Approaches for the Evaluation of Antimicrobial Activity, Time-Kill Kinetics, and Anti-Biofilm Potential of Thymoquinone (2-Methyl-5-propan-2-ylcyclohexa-2,5-diene-1,4-dione) against Selected Human Pathogens.	Qureshi KA, Imtiaz M, Parvez A, Rai PK, Jaremko M, Emwas AH, Bholay AD, Fatmi MQ.	Antibiotics (Basel)	10.3390/antibiotics11010079	2022
Genetics	Whole-Genome Sequencing of Gram-Negative Bacteria Isolated From Bovine Mastitis and Raw Milk: The First Emergence of Colistin mcr-10 and Fosfomycin fosA5 Resistance Genes in Klebsiella pneumoniae in Middle East.	Tartor YH, Abd El-Aziz NK, Gharieb RMA, El Damaty HM, Enany S, Soliman EA, Abdellatif SS, Attia ASA, Bahnass MM, El-Shazly YA, Elbediwi M, Ramadan H.	Front Microbiol	10.3389/fmicb.2021.770813	2021
	Gemifloxacin-transition metal complexes as therapeutic candidates: antimicrobial, antifungal, anti-enzymatic, and docking studies of newly synthesized complexes.	Shamim S, Gul S, Rauf A, Rashid U, Khan A, Amin R, Akhtar F.	Heliyon	10.1016/j.heliyon.2022.e10378	2022
	Sustainable-Green Synthesis of Silver Nanoparticles Using Aqueous Hyssopus officinalis and Calendula officinalis Extracts and Their Antioxidant and Antibacterial Activities.	Balciunaitiene A, Puzeryte V, Radenkovs V, Krasnova I, Memvanga PB, Viskelis P, Streimikyte P, Viskelis J.	Molecules	10.3390/molecules27227700	2022
	Internal and external microbiota of home-caught Anopheles coluzzii (Diptera: Culicidae) from Côte d'Ivoire, Africa: Mosquitoes are filthy.	Chen K, Ponnusamy L, Mouhamadou CS, Fodjo BK, Sadia GC, Affoue FPK, Deguenon JM, Roe RM.	PLoS One	10.1371/journal.pone.0278912	2022
	"Smart" Antimicrobial Nanocomplexes with Potential to Decrease Surgical Site Infections (SSI).	Edis Z, Haj Bloukh S, Ibrahim MR, Abu Sara H.	Pharmaceutics	10.3390/pharmaceutics12040361	2020
	Probiotic Potentiality from Versatile Lactiplantibacillus plantarum Strains as Resource to Enhance Freshwater Fish Health.	Iorizzo M, Albanese G, Letizia F, Testa B, Tremonte P, Vergalito F, Lombardi SJ, Succi M, Coppola R, Sorrentino E.	Microorganisms	10.3390/microorganisms10020463	2022
	Employing Gamma-Ray-Modified Carbon Quantum Dots to Combat a Wide Range of Bacteria.	Markovic ZM, Misovic AS, Zmejkoski DZ, Zdravkovic NM, Kovac J, Bajuk-Bogdanovic DV, Milivojevic DD, Mojsin MM, Stevanovic MJ, Pavlovic VB, Markovic BMT.	Antibiotics (Basel)	10.3390/antibiotics12050919	2023
Metabolism	Selenium Nanoparticle Synthesized by Proteus mirabilis YC801: An Efficacious Pathway for Selenite Biotransformation and Detoxification.	Wang Y, Shu X, Hou J, Lu W, Zhao W, Huang S, Wu L.	Int J Mol Sci	10.3390/ijms19123809	2018
Pathogenicity	In vitro antibacterial activity of poly (amidoamine)-G7 dendrimer.	Gholami M, Mohammadi R, Arzanlou M, Akbari Dourbash F, Kouhsari E, Majidi G, Mohseni SM, Nazari S.	BMC Infect Dis	10.1186/s12879-017-2513-7	2017
	Bactericidal and antioxidant bacterial cellulose hydrogels doped with chitosan as potential urinary tract infection biomedical agent.	Zmejkoski DZ, Markovic ZM, Zdravkovic NM, Trisic DD, Budimir MD, Kuzman SB, Kozyrovska NO, Orlovska IV, Bugarova N, Petrovic DZ, Kovacova M, Kleinova A, Spitalsky Z, Pavlovic VB, Todorovic Markovic BM.	RSC Adv	10.1039/d0ra10782d	2021
	Skin-penetrating nematodes exhibit life-stage-specific interactions with host-associated and environmental bacteria.	Chavez IN, Brown TM, Assie A, Bryant AS, Samuel BS, Hallem EA.	BMC Biol	10.1186/s12915-021-01153-7	2021
Metabolism	Characterization of 17 chaperone-usher fimbriae encoded by Proteus mirabilis reveals strong conservation.	Kuan L, Schaffer JN, Zouzias CD, Pearson MM.	J Med Microbiol	10.1099/jmm.0.069971-0	2014
Genetics	Genome sequencing and annotation of Proteus sp. SAS71.	Selim S, Hassan S, Hagagy N.	Genom Data	10.1016/j.gdata.2015.08.015	2015
	Evaluation of the antidermatophytic activity of potassium salts of N-acylhydrazinecarbodithioates and their aminotriazole-thione derivatives.	Ciesielska A, Kowalczyk A, Paneth A, Staczek P.	Sci Rep	10.1038/s41598-024-54025-9	2024
	Draft Genome Sequence of the Opportunistic Human Pathogen Morganella morganii SC01.	Khatri I, Dureja C, Raychaudhuri S, Subramanian S.	Genome Announc	10.1128/genomea.00051-12	2013
	Vitamin E for Prevention of Biofilm-caused Healthcare-associated Infections.	Vergalito F, Pietrangelo L, Petronio Petronio G, Colitto F, Alfio Cutuli M, Magnifico I, Venditti N, Guerra G, Di Marco R.	Open Med (Wars)	10.1515/med-2020-0004	2018
	Bacillus subtilis: As an Efficient Bacterial Strain for the Reclamation of Water Loaded with Textile Azo Dye, Orange II.	Ikram M, Naeem M, Zahoor M, Hanafiah MM, Oyekanmi AA, Islam NU, Ullah M, Mahnashi MH, Ali AA, Jalal NA, Bantun F, Momenah AM, Sadiq A.	Int J Mol Sci	10.3390/ijms231810637	2022
	Proanthocyanidin-enriched cranberry extract induces resilient bacterial community dynamics in a gnotobiotic mouse model.	Neto CC, Mortzfeld BM, Turbitt JR, Bhattarai SK, Yeliseyev V, DiBenedetto N, Bry L, Bucci V.	Microb Cell	10.15698/mic2021.06.752	2021
	Biodegradation of Azo Dye Methyl Red by Pseudomonas aeruginosa: Optimization of Process Conditions.	Ikram M, Naeem M, Zahoor M, Rahim A, Hanafiah MM, Oyekanmi AA, Shah AB, Mahnashi MH, Al Ali A, Jalal NA, Bantun F, Sadiq A.	Int J Environ Res Public Health	10.3390/ijerph19169962	2022
	Antimicrobial and Antifungal Activity of Pelargonium roseum Essential Oils.	Carmen G, Hancu G.	Adv Pharm Bull	10.5681/apb.2014.075	2014
	Antimicrobial and Antioxidant Properties of Four Lycopus Taxa and an Interaction Study of Their Major Compounds.	Trajcikova E, Kurin E, Slobodnikova L, Straka M, Lichvarikova A, Dokupilova S, Cicova I, Nagy M, Mucaji P, Bittner Fialova S.	Molecules	10.3390/molecules25061422	2020
Metabolism	The Nutritional Supplement L-Alpha Glycerylphosphorylcholine Promotes Atherosclerosis.	Wang Z, Hazen J, Jia X, Org E, Zhao Y, Osborn LJ, Nimer N, Buffa J, Culley MK, Krajcik D, van den Born BH, Zwinderman K, Levison BS, Nieuwdorp M, Lusis AJ, DiDonato JA, Hazen SL.	Int J Mol Sci	10.3390/ijms222413477	2021
	Thymus musilii Velen. Methanolic Extract: In Vitro and In Silico Screening of Its Antimicrobial, Antioxidant, Anti-Quorum Sensing, Antibiofilm, and Anticancer Activities.	Noumi E, Ahmad I, Bouali N, Patel H, Ghannay S, ALrashidi AA, Abdulhakeem MA, Patel M, Ceylan O, Badraoui R, Mousa Elayyan AE, Adnan M, Kadri A, Snoussi M.	Life (Basel)	10.3390/life13010062	2022
	Aromatic Herbs as a Source of Bioactive Compounds: An Overview of Their Antioxidant Capacity, Antimicrobial Activity, and Major Applications.	Grigore-Gurgu L, Dumitrascu L, Aprodu I.	Molecules	10.3390/molecules30061304	2025
	Study of Crystal Formation and Nitric Oxide (NO) Release Mechanism from S-Nitroso-N-acetylpenicillamine (SNAP)-Doped CarboSil Polymer Composites for Potential Antimicrobial Applications.	Wo Y, Li Z, Colletta A, Wu J, Xi C, Matzger AJ, Brisbois EJ, Bartlett RH, Meyerhoff ME.	Compos B Eng	10.1016/j.compositesb.2017.03.027	2017
Pathogenicity	In Vitro and In Vivo Activities of Zinc Linolenate, a Selective Antibacterial Agent against Helicobacter pylori.	Huang Y, Hang X, Jiang X, Zeng L, Jia J, Xie Y, Li F, Bi H.	Antimicrob Agents Chemother	10.1128/aac.00004-19	2019
	Bio-Evaluation of the Wound Healing Activity of Artemisia judaica L. as Part of the Plant's Use in Traditional Medicine; Phytochemical, Antioxidant, Anti-Inflammatory, and Antibiofilm Properties of the Plant's Essential Oils.	Mohammed HA, Qureshi KA, Ali HM, Al-Omar MS, Khan O, Mohammed SAA.	Antioxidants (Basel)	10.3390/antiox11020332	2022
Metabolism	Anti-Microbial, Anti-Oxidant, and alpha-Amylase Inhibitory Activity of Traditionally-Used Medicinal Herbs: A Comparative Analyses of Pharmacology, and Phytoconstituents of Regional Halophytic Plants' Diaspora.	Al-Omar MS, Mohammed HA, Mohammed SAA, Abd-Elmoniem E, Kandil YI, Eldeeb HM, Chigurupati S, Sulaiman GM, Al-Khurayyif HK, Almansour BS, Suryavamshi PM, Khan RA.	Molecules	10.3390/molecules25225457	2020
	Chemical composition and antibacterial and cytotoxic activities of Allium hirtifolium Boiss.	Ismail S, Jalilian FA, Talebpour AH, Zargar M, Shameli K, Sekawi Z, Jahanshiri F.	Biomed Res Int	10.1155/2013/696835	2013
	Functional identification of the Proteus mirabilis core lipopolysaccharide biosynthesis genes.	Aquilini E, Azevedo J, Jimenez N, Bouamama L, Tomas JM, Regue M.	J Bacteriol	10.1128/jb.00494-10	2010
Metabolism	Systematic Identification of Lysine 2-hydroxyisobutyrylated Proteins in Proteus mirabilis.	Dong H, Guo Z, Feng W, Zhang T, Zhai G, Palusiak A, Rozalski A, Rozalski A, Tian S, Bai X, Shen L, Chen P, Wang Q, Fan E, Cheng Z, Zhang K.	Mol Cell Proteomics	10.1074/mcp.ra117.000430	2018
Enzymology	The Odilorhabdin Antibiotic Biosynthetic Cluster and Acetyltransferase Self-Resistance Locus Are Niche and Species Specific.	Lanois-Nouri A, Pantel L, Fu J, Houard J, Ogier JC, Polikanov YS, Racine E, Wang H, Gaudriault S, Givaudan A, Gualtieri M.	mBio	10.1128/mbio.02826-21	2022
	Determination of Antibacterial and Technological Properties of Vaginal Lactobacilli for Their Potential Application in Dairy Products.	Siroli L, Patrignani F, Serrazanetti DI, Parolin C, Nahui Palomino RA, Vitali B, Lanciotti R.	Front Microbiol	10.3389/fmicb.2017.00166	2017
	Investigating In Vitro Antibacterial Activities of Medicinal Plants Having Folkloric Repute in Ethiopian Traditional Medicine.	Sisay M, Bussa N, Gashaw T, Mengistu G.	J Evid Based Integr Med	10.1177/2515690x19886276	2019
Pathogenicity	Motile aeromonads from farmed and wild freshwater fish in northern Italy: an evaluation of antimicrobial activity and multidrug resistance during 2013 and 2016.	Borella L, Salogni C, Vitale N, Scali F, Moretti VM, Pasquali P, Alborali GL.	Acta Vet Scand	10.1186/s13028-020-0504-y	2020
	Dihydrotanshinone I Is Effective against Drug-Resistant Helicobacter pylori In Vitro and In Vivo.	Luo P, Huang Y, Hang X, Tong Q, Zeng L, Jia J, Zhang G, Bi H.	Antimicrob Agents Chemother	10.1128/aac.01921-20	2021
	"Smart" Triiodide Compounds: Does Halogen Bonding Influence Antimicrobial Activities?	Edis Z, Haj Bloukh S, Abu Sara H, Bhakhoa H, Rhyman L, Ramasami P.	Pathogens	10.3390/pathogens8040182	2019
Phylogeny	Microbial Communities in the Extraradicular and Intraradicular Infections Associated With Persistent Apical Periodontitis.	Sun X, Yang Z, Nie Y, Hou B.	Front Cell Infect Microbiol	10.3389/fcimb.2021.798367	2021
	Development of a micromanipulation method for single cell isolation of prokaryotes and its application in food safety.	Hohnadel M, Maumy M, Chollet R.	PLoS One	10.1371/journal.pone.0198208	2018
Pathogenicity	A Biorefinery Approach to the Biomass of the Seaweed Undaria pinnatifida (Harvey Suringar, 1873): Obtaining Phlorotannins-Enriched Extracts for Wound Healing.	Ferreira CAM, Felix R, Felix C, Januario AP, Alves N, Novais SC, Dias JR, Lemos MFL.	Biomolecules	10.3390/biom11030461	2021
Metabolism	HtrA-mediated E-cadherin cleavage is limited to DegP and DegQ homologs expressed by gram-negative pathogens.	Abfalter CM, Schubert M, Gotz C, Schmidt TP, Posselt G, Wessler S.	Cell Commun Signal	10.1186/s12964-016-0153-y	2016
	Description of a 2,683-base-pair plasmid containing qnrD in two Providencia rettgeri isolates.	Guillard T, Cambau E, Neuwirth C, Nenninger T, Mbadi A, Brasme L, Vernet-Garnier V, Bajolet O, de Champs C.	Antimicrob Agents Chemother	10.1128/aac.00081-11	2012
Metabolism	Three enzymatic steps required for the galactosamine incorporation into core lipopolysaccharide.	Aquilini E, Azevedo J, Merino S, Jimenez N, Tomas JM, Regue M.	J Biol Chem	10.1074/jbc.m110.168385	2010
Metabolism	Influence of quorum sensing signal molecules on biofilm formation in Proteus mirabilis O18.	Stankowska D, Czerwonka G, Rozalska S, Grosicka M, Dziadek J, Kaca W.	Folia Microbiol (Praha)	10.1007/s12223-011-0091-4	2012
	Isolation and Purification of Complex II from Proteus Mirabilis Strain ATCC 29245.	Shabbiri K, Ahmad W, Syed Q, Adnan A.	Braz J Microbiol	10.1590/s1517-83822010005000032	2010
	In Vitro and In Vivo Properties of CUO246, a Novel Bacterial DNA Gyrase/Topoisomerase IV Inhibitor.	Blais J, Dean CR, Lapointe G, Leeds JA, Ma S, Morris L, Moser HE, Osborne CS, Prosen KR, Richie D, Skepper C, Thompson K, Vo J, Yue Q, Rivkin A.	Antimicrob Agents Chemother	10.1128/aac.00921-22	2022
	Chemical Profile, Antioxidant, Antimicrobial, and Anticancer Activities of the Water-Ethanol Extract of Pulicaria undulata Growing in the Oasis of Central Saudi Arabian Desert.	Mohammed HA, Al-Omar MS, Khan RA, Mohammed SAA, Qureshi KA, Abbas MM, Al Rugaie O, Abd-Elmoniem E, Ahmad AM, Kandil YI.	Plants (Basel)	10.3390/plants10091811	2021
Enzymology	Chromosome-encoded class D beta-lactamase OXA-23 in Proteus mirabilis.	Bonnet R, Marchandin H, Chanal C, Sirot D, Labia R, De Champs C, Jumas-Bilak E, Sirot J.	Antimicrob Agents Chemother	10.1128/aac.46.6.2004-2006.2002	2002
Metabolism	Two Proteins Form a Heteromeric Bacterial Self-Recognition Complex in Which Variable Subdomains Determine Allele-Restricted Binding.	Cardarelli L, Saak C, Gibbs KA.	mBio	10.1128/mbio.00251-15	2015
Biotechnology	Salmonella genomic island 1 (SGI1), variant SGI1-I, and new variant SGI1-O in proteus mirabilis clinical and food isolates from China.	Boyd DA, Shi X, Hu QH, Ng LK, Doublet B, Cloeckaert A, Mulvey MR.	Antimicrob Agents Chemother	10.1128/aac.00902-07	2008
	Potential application of novel technology developed for instant decontamination of personal protective equipment before the doffing step.	Breda Mascarenhas LA, Machado BAS, Rodrigues LAP, Saraiva Hodel KV, Bandeira Santos AA, Freitas Neves PR, da Silva Andrade LPC, Soares MB, de Andrade JB, Badaro R.	PLoS One	10.1371/journal.pone.0250854	2021
	The joint in vitro action of polymyxin B and miconazole against pathogens associated with canine otitis externa from three European countries.	Pietschmann S, Meyer M, Voget M, Cieslicki M.	Vet Dermatol	10.1111/vde.12037	2013
	Mobile insertion cassette elements found in small non-transmissible plasmids in Proteeae may explain qnrD mobilization.	Guillard T, Grillon A, de Champs C, Cartier C, Madoux J, Bercot B, Lebreil AL, Lozniewski A, Riahi J, Vernet-Garnier V, Cambau E.	PLoS One	10.1371/journal.pone.0087801	2014
	Comparative Phytochemical Profile and Biological Activity of Four Major Medicinal Halophytes from Qassim Flora.	Mohammed HA, Ali HM, Qureshi KA, Alsharidah M, Kandil YI, Said R, Mohammed SAA, Al-Omar MS, Rugaie OA, Abdellatif AAH, Abd-Elmoniem E, Abbas MM, Mohany KM, Khan RA.	Plants (Basel)	10.3390/plants10102208	2021
	Synthesis and Evaluation of Biological Activities of Aziridine Derivatives of Urea and Thiourea.	Kowalczyk A, Pieczonka AM, Rachwalski M, Lesniak S, Staczek P.	Molecules	10.3390/molecules23010045	2017
Enzymology	Roles and current applications of S-nitrosoglutathione in anti-infective biomaterials.	Qian H, Ye Z, Pi L, Ao J.	Mater Today Bio	10.1016/j.mtbio.2022.100419	2022
	In vitro antibacterial and cytotoxic activity of leaf extracts of Centella asiatica (L.) Urb, Warburgia salutaris (Bertol. F.) Chiov and Curtisia dentata (Burm. F.) C.A.Sm - medicinal plants used in South Africa.	Soyingbe OS, Mongalo NI, Makhafola TJ.	BMC Complement Altern Med	10.1186/s12906-018-2378-3	2018
Phylogeny	Assessment of Reproducibility of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Bacterial and Yeast Identification.	Westblade LF, Garner OB, MacDonald K, Bradford C, Pincus DH, Mochon AB, Jennemann R, Manji R, Bythrow M, Lewinski MA, Burnham CA, Ginocchio CC.	J Clin Microbiol	10.1128/jcm.00187-15	2015
Metabolism	Transcriptional analysis of the MrpJ network: modulation of diverse virulence-associated genes and direct regulation of mrp fimbrial and flhDC flagellar operons in Proteus mirabilis.	Bode NJ, Debnath I, Kuan L, Schulfer A, Ty M, Pearson MM.	Infect Immun	10.1128/iai.02978-14	2015
Enzymology	Development and evaluation of a rapid and sensitive RPA assay for specific detection of Vibrio parahaemolyticus in seafood.	Geng Y, Tan K, Liu L, Sun XX, Zhao B, Wang J.	BMC Microbiol	10.1186/s12866-019-1562-z	2019
Enzymology	Development of a multiplex real-time PCR assay for the simultaneous detection of four bacterial pathogens causing pneumonia.	Lim HJ, Kang ER, Park MY, Kim BK, Kim MJ, Jung S, Roh KH, Sung N, Yang JH, Lee MW, Lee SH, Yang YJ.	PLoS One	10.1371/journal.pone.0253402	2021
Metabolism	Isolation, characterization, anti-MRSA evaluation, and in-silico multi-target anti-microbial validations of actinomycin X₂ and actinomycin D produced by novel Streptomyces smyrnaeus UKAQ_23.	Qureshi KA, Bholay AD, Rai PK, Mohammed HA, Khan RA, Azam F, Jaremko M, Emwas AH, Stefanowicz P, Waliczek M, Kijewska M, Ragab EA, Rehan M, Elhassan GO, Anwar MJ, Prajapati DK.	Sci Rep	10.1038/s41598-021-93285-7	2021
Biotechnology	Growth inhibition of various Enterobacteriaceae species by the yeast Hansenula anomala during storage of moist cereal grain.	Olstorpe M, Schnurer J, Passoth V.	Appl Environ Microbiol	10.1128/aem.06024-11	2012
	S-Nitroso-N-acetylpenicillamine (SNAP) Impregnated Silicone Foley Catheters: A Potential Biomaterial/Device To Prevent Catheter-Associated Urinary Tract Infections.	Colletta A, Wu J, Wo Y, Kappler M, Chen H, Xi C, Meyerhoff ME.	ACS Biomater Sci Eng	10.1021/acsbiomaterials.5b00032	2015
Metabolism	Characterization and detection of a widely distributed gene cluster that predicts anaerobic choline utilization by human gut bacteria.	Martinez-del Campo A, Bodea S, Hamer HA, Marks JA, Haiser HJ, Turnbaugh PJ, Balskus EP.	mBio	10.1128/mbio.00042-15	2015
	Lasallia pustulata lichen as possible natural antigenotoxic, antioxidant, antimicrobial and anticancer agent.	Kosanic M, Rankovic B, Stanojkovic T, Stosic I, Grujicic D, Milosevic-Djordjevic O.	Cytotechnology	10.1007/s10616-015-9856-y	2016
Pathogenicity	Evaluation of the antibacterial potential of Petroselinum crispum and Rosmarinus officinalis against bacteria that cause urinary tract infections.	Petrolini FV, Lucarini R, de Souza MG, Pires RH, Cunha WR, Martins CH.	Braz J Microbiol	10.1590/s1517-83822013005000061	2013
Phylogeny	A 16S rRNA Gene and Draft Genome Database for the Murine Oral Bacterial Community.	Joseph S, Aduse-Opoku J, Hashim A, Hanski E, Streich R, Knowles SCL, Pedersen AB, Wade WG, Curtis MA.	mSystems	10.1128/msystems.01222-20	2021
Pathogenicity	New TEM variant (TEM-92) produced by Proteus mirabilis and Providencia stuartii isolates.	de Champs C, Monne C, Bonnet R, Sougakoff W, Sirot D, Chanal C, Sirot J.	Antimicrob Agents Chemother	10.1128/aac.45.4.1278-1280.2001	2001
Metabolism	Non-lethal Inhibition of Gut Microbial Trimethylamine Production for the Treatment of Atherosclerosis.	Wang Z, Roberts AB, Buffa JA, Levison BS, Zhu W, Org E, Org E, Gu X, Huang Y, Zamanian-Daryoush M, Culley MK, DiDonato AJ, Fu X, Hazen JE, Krajcik D, DiDonato JA, Lusis AJ, Hazen SL.	Cell	10.1016/j.cell.2015.11.055	2015
	Chemical Composition, Antioxidant and Antimicrobial Activities of Thymus capitata Essential Oil with Its Preservative Effect against Listeria monocytogenes Inoculated in Minced Beef Meat.	El Abed N, Kaabi B, Smaali MI, Chabbouh M, Habibi K, Mejri M, Marzouki MN, Ben Hadj Ahmed S.	Evid Based Complement Alternat Med	10.1155/2014/152487	2014
	Dynamic Modulation of the Gut Microbiota and Metabolome by Bacteriophages in a Mouse Model.	Hsu BB, Gibson TE, Yeliseyev V, Liu Q, Lyon L, Bry L, Silver PA, Gerber GK.	Cell Host Microbe	10.1016/j.chom.2019.05.001	2019
	Evaluation of in vitro antioxidant, antimicrobial, genotoxic and anticancer activities of lichen Cetraria islandica.	Grujicic D, Stosic I, Kosanic M, Stanojkovic T, Rankovic B, Milosevic-Djordjevic O.	Cytotechnology	10.1007/s10616-013-9629-4	2014
Pathogenicity	Copaifera langsdorffii oleoresin and its isolated compounds: antibacterial effect and antiproliferative activity in cancer cell lines.	Abrao F, de Araujo Costa LD, Alves JM, Senedese JM, de Castro PT, Ambrosio SR, Veneziani RC, Bastos JK, Tavares DC, Martins CH.	BMC Complement Altern Med	10.1186/s12906-015-0961-4	2015
Metabolism	Identification of SPOR domain amino acids important for septal localization, peptidoglycan binding, and a disulfide bond in the cell division protein FtsN.	Duncan TR, Yahashiri A, Arends SJ, Popham DL, Weiss DS.	J Bacteriol	10.1128/jb.00911-13	2013
Pathogenicity	Evaluation of antimicrobial and cytotoxic activities of plant extracts from southern Minas Gerais cerrado.	Chavasco JM, Prado E Feliphe BH, Cerdeira CD, Leandro FD, Coelho LF, Silva JJ, Chavasco JK, Dias AL.	Rev Inst Med Trop Sao Paulo	10.1590/s0036-46652014000100002	2014
	Structural and immunochemical studies on the O-specific polysaccharide of Proteus penneri strain 15.	Zych K, Kowalczyk M, Toukach FV, Paramonov NA, Shashkov AS, Knirel YA, Sidorczyk Z.	Arch Immunol Ther Exp (Warsz)		1997
Pathogenicity	Antibiofilm Activity of the Brown Alga Halidrys siliquosa against Clinically Relevant Human Pathogens.	Busetti A, Thompson TP, Tegazzini D, Megaw J, Maggs CA, Gilmore BF.	Mar Drugs	10.3390/md13063581	2015
Enzymology	Arbitrarily primed polymerase chain reaction provides rapid differentiation of Proteus mirabilis isolates from a pediatric hospital.	Bingen E, Boissinot C, Desjardins P, Cave H, Brahimi N, Lambert-Zechovsky N, Denamur E, Blot P, Elion J.	J Clin Microbiol	10.1128/jcm.31.5.1055-1059.1993	1993
Metabolism	The microbial gbu gene cluster links cardiovascular disease risk associated with red meat consumption to microbiota L-carnitine catabolism.	Buffa JA, Romano KA, Copeland MF, Cody DB, Zhu W, Galvez R, Fu X, Ward K, Ferrell M, Dai HJ, Skye S, Hu P, Li L, Parlov M, McMillan A, Wei X, Nemet I, Koeth RA, Li XS, Wang Z, Sangwan N, Hajjar AM, Dwidar M, Weeks TL, Bergeron N, Krauss RM, Tang WHW, Rey FE, DiDonato JA, Gogonea V, Gerberick GF, Garcia-Garcia JC, Hazen SL.	Nat Microbiol	10.1038/s41564-021-01010-x	2022
	Novel real-time PCR detection assay for Brucella suis.	Hansel C, Mertens K, Elschner MC, Melzer F.	Vet Rec Open	10.1136/vetreco-2014-000084	2015
Pathogenicity	Evidence of in vivo transfer of a plasmid encoding the extended-spectrum beta-lactamase TEM-24 and other resistance factors among different members of the family Enterobacteriaceae.	Neuwirth C, Siebor E, Pechinot A, Duez JM, Pruneaux M, Garel F, Kazmierczak A, Labia R.	J Clin Microbiol	10.1128/jcm.39.5.1985-1988.2001	2001
Phylogeny	Evaluation of a rapid direct assay for identification of bacteria and the mec A and van genes from positive-testing blood cultures.	Eigner U, Weizenegger M, Fahr AM, Witte W.	J Clin Microbiol	10.1128/jcm.43.10.5256-5262.2005	2005
	Isolation and Characterization of Fengycins Produced by Bacillus amyloliquefaciens JFL21 and Its Broad-Spectrum Antimicrobial Potential Against Multidrug-Resistant Foodborne Pathogens.	Lin LZ, Zheng QW, Wei T, Zhang ZQ, Zhao CF, Zhong H, Xu QY, Lin JF, Guo LQ.	Front Microbiol	10.3389/fmicb.2020.579621	2020
	Results of microbiological investigations on the permeability of procedure and surgical gloves.	Gerhardt GG.	Zentralbl Hyg Umweltmed		1989
Enzymology	Isolation of Providencia heimbachae from human feces.	Mohr O'Hara C, Steigerwalt AG, Green D, McDowell M, Hill BC, Brenner DJ, Miller JM.	J Clin Microbiol	10.1128/jcm.37.9.3048-3050.1999	1999
Pathogenicity	In Vitro Antibacterial Properties of Cefiderocol, a Novel Siderophore Cephalosporin, against Gram-Negative Bacteria.	Ito A, Sato T, Ota M, Takemura M, Nishikawa T, Toba S, Kohira N, Miyagawa S, Ishibashi N, Matsumoto S, Nakamura R, Tsuji M, Yamano Y.	Antimicrob Agents Chemother	10.1128/aac.01454-17	2018
Phylogeny	Species-specific PCR as a tool for the identification of Burkholderia gladioli.	Whitby PW, Pope LC, Carter KB, LiPuma JJ, Stull TL.	J Clin Microbiol	10.1128/jcm.38.1.282-285.2000	2000
Metabolism	Extent of peptidoglycan O acetylation in the tribe Proteeae.	Clarke AJ.	J Bacteriol	10.1128/jb.175.14.4550-4553.1993	1993
Metabolism	Hydramacin-1 in action: scrutinizing the barnacle model.	Michalek M, Vincent B, Podschun R, Grotzinger J, Bechinger B, Jung S.	Antimicrob Agents Chemother	10.1128/aac.02498-12	2013
	Proteus mirabilis and Urinary Tract Infections.	Schaffer JN, Pearson MM.	Microbiol Spectr	10.1128/microbiolspec.uti-0017-2013	2015
Metabolism	[Cefotiam concentration in exudate from suction drain of patients with breast cancer following intravenous administration].	Hashimoto I, Sawada Y, Nakamura T, Mikami J, Nishindai H, Yoshimoto M, Nakanishi Y, Fugono T, Maeda K.	Jpn J Antibiot		1986
Pathogenicity	Comparative antibacterial activity of L-695,256, a carbapenem active against methicillin-resistant staphylococci.	Rylander M, Rollof J, Jacobsson K, Norrby SR.	Antimicrob Agents Chemother	10.1128/aac.39.5.1178	1995
	Molecular and virulence characteristics of an outer membrane-associated RTX exoprotein in Pasteurella pneumotropica.	Sasaki H, Ishikawa H, Sato T, Sekiguchi S, Amao H, Kawamoto E, Matsumoto T, Shirama K.	BMC Microbiol	10.1186/1471-2180-11-55	2011
Metabolism	[Transfer of cefmenoxime to burn blister fluids].	Nishizaki A, Aoyama H, Koh T, Izawa Y.	Jpn J Antibiot		1984
Enzymology	BactQuant: an enhanced broad-coverage bacterial quantitative real-time PCR assay.	Liu CM, Aziz M, Kachur S, Hsueh PR, Huang YT, Keim P, Price LB.	BMC Microbiol	10.1186/1471-2180-12-56	2012
Pathogenicity	Differential distribution of plasmid-mediated quinolone resistance genes in clinical enterobacteria with unusual phenotypes of quinolone susceptibility from Argentina.	Andres P, Lucero C, Soler-Bistue A, Guerriero L, Albornoz E, Tran T, Zorreguieta A, PMQR Group, Galas M, Corso A, Tolmasky ME, Petroni A.	Antimicrob Agents Chemother	10.1128/aac.01615-12	2013
Pathogenicity	Rapid detection, by PCR and reverse hybridization, of mutations in the Helicobacter pylori 23S rRNA gene, associated with macrolide resistance.	van Doorn LJ, Debets-Ossenkopp YJ, Marais A, Sanna R, Megraud F, Kusters JG, Quint WG.	Antimicrob Agents Chemother	10.1128/aac.43.7.1779	1999
Phylogeny	Use of the BD PHOENIX Automated Microbiology System for direct identification and susceptibility testing of gram-negative rods from positive blood cultures in a three-phase trial.	Funke G, Funke-Kissling P.	J Clin Microbiol	10.1128/jcm.42.4.1466-1470.2004	2004
	Diversity of TEM mutants in Proteus mirabilis.	Bonnet R, De Champs C, Sirot D, Chanal C, Labia R, Sirot J.	Antimicrob Agents Chemother	10.1128/aac.43.11.2671	1999
	Dynamic aspects of the structured cell population in a swarming colony of Proteus mirabilis.	Matsuyama T, Takagi Y, Nakagawa Y, Itoh H, Wakita J, Matsushita M.	J Bacteriol	10.1128/jb.182.2.385-393.2000	2000
Enzymology	Quantitative real-time Legionella PCR for environmental water samples: data interpretation.	Joly P, Falconnet PA, Andre J, Weill N, Reyrolle M, Vandenesch F, Maurin M, Etienne J, Jarraud S.	Appl Environ Microbiol	10.1128/aem.72.4.2801-2808.2006	2006
Enzymology	New plate medium for screening and presumptive identification of gram-negative urinary tract pathogens.	Thaller MC, Berlutti F, Dainelli B, Pezzi R.	J Clin Microbiol	10.1128/jcm.26.4.791-793.1988	1988
Enzymology	Identification and detection of Stenotrophomonas maltophilia by rRNA-directed PCR.	Whitby PW, Carter KB, Burns JL, Royall JA, LiPuma JJ, Stull TL.	J Clin Microbiol	10.1128/jcm.38.12.4305-4309.2000	2000
Pathogenicity	Novel polymyxin derivatives carrying only three positive charges are effective antibacterial agents.	Vaara M, Fox J, Loidl G, Siikanen O, Apajalahti J, Hansen F, Frimodt-Moller N, Nagai J, Takano M, Vaara T.	Antimicrob Agents Chemother	10.1128/aac.00405-08	2008
Phylogeny	Development of real-time PCR assays for detection and quantification of Bacillus cereus group species: differentiation of B. weihenstephanensis and rhizoid B. pseudomycoides isolates from milk.	Oliwa-Stasiak K, Kolaj-Robin O, Adley CC.	Appl Environ Microbiol	10.1128/aem.01581-10	2011
	Role of enteric bacteria in the pathogenesis of rheumatoid arthritis: evidence for antibodies to enterobacterial common antigens in rheumatoid sera and synovial fluids.	Aoki S, Yoshikawa K, Yokoyama T, Nonogaki T, Iwasaki S, Mitsui T, Niwa S.	Ann Rheum Dis	10.1136/ard.55.6.363	1996
Enzymology	Isolation and characterization of bacteria capable of tolerating the extreme conditions of clean room environments.	La Duc MT, Dekas A, Osman S, Moissl C, Newcombe D, Venkateswaran K.	Appl Environ Microbiol	10.1128/aem.03007-06	2007
Metabolism	Expression during host infection and localization of Yersinia pestis autotransporter proteins.	Lenz JD, Lawrenz MB, Cotter DG, Lane MC, Gonzalez RJ, Palacios M, Miller VL.	J Bacteriol	10.1128/jb.05877-11	2011
Phylogeny	Distribution of mip-related sequences in 39 species (48 serogroups) of Legionellaceae.	Riffard S, Vandenesch F, Reyrolle M, Etienne J.	Epidemiol Infect	10.1017/s0950268800059173	1996
Enzymology	Detection of Mycobacterium tuberculosis by PCR amplification with pan-Mycobacterium primers and hybridization to an M. tuberculosis-specific probe.	Tevere VJ, Hewitt PL, Dare A, Hocknell P, Keen A, Spadoro JP, Young KK.	J Clin Microbiol	10.1128/jcm.34.4.918-923.1996	1996
Enzymology	Detection of legionellae in hospital water samples by quantitative real-time LightCycler PCR.	Wellinghausen N, Frost C, Marre R.	Appl Environ Microbiol	10.1128/aem.67.9.3985-3993.2001	2001
Metabolism	Production of mucoid exopolysaccharide during development of Pseudomonas aeruginosa biofilms.	Hoyle BD, Williams LJ, Costerton JW.	Infect Immun	10.1128/iai.61.2.777-780.1993	1993
	Interaction of Legionella pneumophila with Acanthamoeba castellanii: uptake by coiling phagocytosis and inhibition of phagosome-lysosome fusion.	Bozue JA, Johnson W.	Infect Immun	10.1128/iai.64.2.668-673.1996	1996
Enzymology	Rapid flow cytometric bacterial detection and determination of susceptibility to amikacin in body fluids and exudates.	Cohen CY, Sahar E.	J Clin Microbiol	10.1128/jcm.27.6.1250-1256.1989	1989
Biotechnology	Detection of Salmonella spp. in oysters by PCR.	Bej AK, Mahbubani MH, Boyce MJ, Atlas RM.	Appl Environ Microbiol	10.1128/aem.60.1.368-373.1994	1994
Enzymology	High levels of Gardnerella vaginalis detected with an oligonucleotide probe combined with elevated pH as a diagnostic indicator of bacterial vaginosis.	Sheiness D, Dix K, Watanabe S, Hillier SL.	J Clin Microbiol	10.1128/jcm.30.3.642-648.1992	1992
	PCR primers and probes for the 16S rRNA gene of most species of pathogenic bacteria, including bacteria found in cerebrospinal fluid.	Greisen K, Loeffelholz M, Purohit A, Leong D.	J Clin Microbiol	10.1128/jcm.32.2.335-351.1994	1994
	Fatty Acid-Containing p(HEMA) Hydrogels; A Promising Coating Platform to Reduce Encrustation on Urinary Catheters.	Jones DS, Andrews GP, Hamill T, Gilmore BF.	Polymers (Basel)	10.3390/polym17040518	2025
Phylogeny	Ribosomal DNA Sequence-Based Taxonomy and Antimicrobial Activity of Prorocentrum spp. (Dinophyceae) from Mauritius Coastal Waters, South-West Indian Ocean.	Mussai P, Larsen J, Alrefaei AF, Jeewon R.	Mar Drugs	10.3390/md21040216	2023
Phylogeny	Persistence of bacterial indicators and zoonotic pathogens in contaminated cattle wastes.	Blaiotta G, Di Cerbo A, Murru N, Coppola R, Aponte M.	BMC Microbiol	10.1186/s12866-016-0705-8	2016
	Physicochemical, Bacteriostatic, and Biological Properties of Starch/Chitosan Polymer Composites Modified by Graphene Oxide, Designed as New Bionanomaterials.	Krystyjan M, Khachatryan G, Grabacka M, Krzan M, Witczak M, Grzyb J, Woszczak L.	Polymers (Basel)	10.3390/polym13142327	2021
	Biofilm inhibition and pathogenicity attenuation in bacteria by Proteus mirabilis.	Yu S, Zhu X, Zhou J, Cai Z.	R Soc Open Sci	10.1098/rsos.170702	2018
	Oral Progenitor Cell Line-Derived Small Extracellular Vesicles as a Treatment for Preferential Wound Healing Outcome.	Knight R, Board-Davies E, Brown H, Clayton A, Davis T, Karatas B, Burston J, Tabi Z, Falcon-Perez JM, Paisey S, Stephens P.	Stem Cells Transl Med	10.1093/stcltm/szac037	2022
Phylogeny	Rapid detection and differentiation of Salmonella species, Salmonella Typhimurium and Salmonella Enteritidis by multiplex quantitative PCR.	Heymans R, Vila A, van Heerwaarden CAM, Jansen CCC, Castelijn GAA, van der Voort M, Biesta-Peters EG.	PLoS One	10.1371/journal.pone.0206316	2018
	Antimicrobial Activity of Calixarenes and Related Macrocycles.	Shurpik DN, Padnya PL, Stoikov II, Cragg PJ.	Molecules	10.3390/molecules25215145	2020
Metabolism	Oral Mucosal Lamina Propria-Progenitor Cells Exert Antibacterial Properties via the Secretion of Osteoprotegerin and Haptoglobin.	Board-Davies E, Moses R, Sloan A, Stephens P, Davies LC.	Stem Cells Transl Med	10.5966/sctm.2015-0043	2015
Phylogeny	Molecular characterization of the genera Proteus, Morganella, and Providencia by ribotyping.	Pignato S, Giammanco GM, Grimont F, Grimont PA, Giammanco G.	J Clin Microbiol	10.1128/jcm.37.9.2840-2847.1999	1999
	Overcoming drug resistance with alginate oligosaccharides able to potentiate the action of selected antibiotics.	Khan S, Tondervik A, Sletta H, Klinkenberg G, Emanuel C, Onsoyen E, Myrvold R, Howe RA, Walsh TR, Hill KE, Thomas DW.	Antimicrob Agents Chemother	10.1128/aac.00525-12	2012
	P blood group phenotype, proteus antibody titres, and rheumatoid arthritis.	Deighton CM, Gray J, Roberts DF, Bint AJ, Walker DJ.	Ann Rheum Dis	10.1136/ard.51.11.1242	1992
	From Nature to Nurture: The Science and Applications of Snail Slime in Health and Beauty.	Rashad M, Sampo S, Cataldi A, Zara S.	J Cosmet Dermatol	10.1111/jocd.70002	2025
	Emulgel Loaded with Flaxseed Extracts as New Therapeutic Approach in Wound Treatment.	Pagano C, Baiocchi C, Beccari T, Blasi F, Cossignani L, Ceccarini MR, Orabona C, Orecchini E, Di Raimo E, Primavilla S, Salvini L, Michele AD, Perioli L, Ricci M.	Pharmaceutics	10.3390/pharmaceutics13081107	2021
Metabolism	Engineering of L-amino acid deaminases for the production of alpha-keto acids from L-amino acids.	Nshimiyimana P, Liu L, Du G.	Bioengineered	10.1080/21655979.2019.1595990	2019
Genetics	Real-Time PCR Method for the Rapid Detection and Quantification of Pathogenic Staphylococcus Species Based on Novel Molecular Target Genes.	Kim E, Yang SM, Won JE, Kim DY, Kim DS, Kim HY.	Foods	10.3390/foods10112839	2021
	Molecular Identification of Fungal Species through Multiplex-qPCR to Determine Candidal Vulvovaginitis and Antifungal Susceptibility.	Arrieta-Aguirre I, Menendez-Manjon P, Carrano G, Diez A, Fernandez-de-Larrinoa I, Moragues MD.	J Fungi (Basel)	10.3390/jof9121145	2023
	Structural and Functional Characterization of the Newly Designed Antimicrobial Peptide Crabrolin21.	Cantini F, Gianni P, Bobone S, Troiano C, van Ingen H, Massoud R, Perini N, Migliore L, Savarin P, Sanders C, Stella L, Sette M.	Membranes (Basel)	10.3390/membranes13030365	2023
	A novel real-time PCR assay for specific detection of Brucella melitensis.	Kaden R, Ferrari S, Alm E, Wahab T.	BMC Infect Dis	10.1186/s12879-017-2327-7	2017
	Enhanced Antibiotic Tolerance of an In Vitro Multispecies Uropathogen Biofilm Model, Useful for Studies of Catheter-Associated Urinary Tract Infections.	Hou J, Wang L, Alm M, Thomsen P, Monsen T, Ramstedt M, Burmolle M.	Microorganisms	10.3390/microorganisms10061207	2022
	Functional properties of lactic acid bacteria isolated from Tilapia (Oreochromis niloticus) in Ivory Coast.	Coulibaly WH, Kouadio NR, Camara F, Diguta C, Matei F.	BMC Microbiol	10.1186/s12866-023-02899-6	2023
	Caffeic Acid Phosphanium Derivatives: Potential Selective Antitumor, Antimicrobial and Antiprotozoal Agents.	Lukac M, Slobodnikova L, Mrva M, Dusekova A, Garajova M, Kello M, Sebova D, Pisarcik M, Kojnok M, Vrtak A, Kurin E, Bittner Fialova S.	Int J Mol Sci	10.3390/ijms25021200	2024
	Biosurfactants and their role in the inhibition of the biofilmforming pathogens.	Englerova K, Nemcova R, Stykova E.	Ceska Slov Farm	10.36290/csf.2018.015	2018
	Derivatization of Rosmarinic Acid Enhances its in vitro Antitumor, Antimicrobial and Antiprotozoal Properties.	Bittner Fialova S, Kello M, Coma M, Slobodnikova L, Drobna E, Holkova I, Garajova M, Mrva M, Zachar V, Lukac M.	Molecules	10.3390/molecules24061078	2019
	Characterization of a Novel Diarrheagenic Strain of Proteus mirabilis Associated With Food Poisoning in China.	Gong Z, Shi X, Bai F, He X, Zhang H, Li Y, Wan Y, Lin Y, Qiu Y, Chen Q, Hu Q, Cao H	Front Microbiol	10.3389/fmicb.2019.02810	2019
Pathogenicity	Analysis of inflammatory cytokine expression in the urinary tract of BALB/c mice infected with Proteus (P.) mirabilis and enteroaggregative Escherichia (E.) coli (EAEC) strains.	Melendez-Avalos A, Sainz-Espunes T, Castrillon-Rivera LE, Mendoza-Perez F, Palma-Ramos A, Castaneda-Sanchez JI, Drago-Serrano EM	Folia Microbiol (Praha)	10.1007/s12223-019-00714-2	2019
Pathogenicity	The impact of ethanol extract of propolis on biofilm forming by Proteus Mirabilis strains isolated from chronic wounds infections.	Kwiecinska-Pirog J, Skowron K, Sniegowska A, Przekwas J, Balcerek M, Zaluski D, Gospodarek-Komkowska E	Nat Prod Res	10.1080/14786419.2018.1470513	2018
Enzymology	qnrA6 genetic environment and quinolone resistance conferred on Proteus mirabilis.	Jayol A, Janvier F, Guillard T, Chau F, Merens A, Robert J, Fantin B, Bercot B, Cambau E	J Antimicrob Chemother	10.1093/jac/dkv431	2016
Metabolism	Combination of phenylpyruvic acid (PPA) pathway engineering and molecular engineering of L-amino acid deaminase improves PPA production with an Escherichia coli whole-cell biocatalyst.	Hou Y, Hossain GS, Li J, Shin HD, Du G, Liu L	Appl Microbiol Biotechnol	10.1007/s00253-015-7048-5	2015
Metabolism	Production of phenylpyruvic acid from L-phenylalanine using an L-amino acid deaminase from Proteus mirabilis: comparison of enzymatic and whole-cell biotransformation approaches.	Hou Y, Hossain GS, Li J, Shin HD, Liu L, Du G	Appl Microbiol Biotechnol	10.1007/s00253-015-6757-0	2015
Pathogenicity	Convenient syntheses of cyanuric chloride-derived NHC ligands, their Ag(I) and Au(I) complexes and antimicrobial activity.	Almalioti F, MacDougall J, Hughes S, Hasson MM, Jenkins RL, Ward BD, Tizzard GJ, Coles SJ, Williams DW, Bamford S, Fallis IA, Dervisi A	Dalton Trans	10.1039/c3dt51400e	2013
Enzymology	Expression and characterization of a second L-amino acid deaminase isolated from Proteus mirabilis in Escherichia coli.	Baek JO, Seo JW, Kwon O, Seong SI, Kim IH, Kim CH	J Basic Microbiol	10.1002/jobm.201000086	2011
Genetics	Chromosomally encoded blaCMY-2 located on a novel SXT/R391-related integrating conjugative element in a Proteus mirabilis clinical isolate.	Harada S, Ishii Y, Saga T, Tateda K, Yamaguchi K	Antimicrob Agents Chemother	10.1128/AAC.00111-10	2010
Metabolism	Enhanced microbial biomass assay using mutant luciferase resistant to benzalkonium chloride.	Hattori N, Sakakibara T, Kajiyama N, Igarashi T, Maeda M, Murakami S	Anal Biochem	10.1016/s0003-2697(03)00322-1	2003
Enzymology	Integration of a transposon Tn1-encoded inhibitor-resistant beta-lactamase gene, bla(TEM-67) from Proteus mirabilis, into the Escherichia coli chromosome.	Naas T, Zerbib M, Girlich D, Nordmann P	Antimicrob Agents Chemother	10.1128/AAC.47.1.19-26.2003	2003
Genetics	DNA gyrase and topoisomerase IV mutations associated with fluoroquinolone resistance in Proteus mirabilis.	Weigel LM, Anderson GJ, Tenover FC	Antimicrob Agents Chemother	10.1128/AAC.46.8.2582-2587.2002	2002
Metabolism	Imipenem resistance in clinical isolates of Proteus mirabilis associated with alterations in penicillin-binding proteins.	Neuwirth C, Siebor E, Duez JM, Pechinot A, Kazmierczak A	J Antimicrob Chemother	10.1093/jac/36.2.335	1995
	GC-MS Profiling, In Vitro Antioxidant, Antimicrobial, and In Silico NADPH Oxidase Inhibition Studies of Essential Oil of Juniperus thurifera Bark.	Lafraxo S, El Moussaoui A, A Bin Jardan Y, El Barnossi A, Chebaibi M, Baammi S, Ait Akka A, Chebbac K, Akhazzane M, Chelouati T, Nafidi HA, Farid K, Bourhia M, Bari A	Evid Based Complement Alternat Med	10.1155/2022/6305672	2022
Proteome	Phytochemical Analysis and Antioxidant, Antibacterial, and Antifungal Effects of Essential Oil of Black Caraway (Nigella sativa L.) Seeds against Drug-Resistant Clinically Pathogenic Microorganisms.	Zouirech O, Alyousef AA, El Barnossi A, El Moussaoui A, Bourhia M, Salamatullah AM, Ouahmane L, Giesy JP, Aboul-Soud MAM, Lyoussi B, Derwich E	Biomed Res Int	10.1155/2022/5218950	2022
	Total Polyphenols Content, Antioxidant and Antimicrobial Activities of Leaves of Solanum elaeagnifolium Cav. from Morocco.	Bouslamti M, El Barnossi A, Kara M, Alotaibi BS, Al Kamaly O, Assouguem A, Lyoussi B, Benjelloun AS	Molecules	10.3390/molecules27134322	2022
	Taxonomic and phenotypic characterization of a novel Providencia species: Providencia lanzhouensis sp. nov.	Xiang Y, Dong X, Ma L, Cao D, Li Y, Jiang X, Xu P, Yuan X, Bi K, Zhang Y, Han Y, Zhang Y.	Microbiol Spectr	10.1128/spectrum.00549-25	2025
	Novel Providencia xianensis sp. nov.: A multidrug-resistant species identified in clinical infections.	Dong X, Xiang Y, Yang P, Wang S, Yan W, Yuan Y, Zhou S, Zhou K, Liu J, Zhang Y.	Eur J Clin Microbiol Infect Dis	10.1007/s10096-024-04821-y	2024
Phylogeny	Proteus columbae sp. nov., isolated from a pigeon in Ma'anshan, China.	Dai H, Wang Y, Fang Y, Xiao T, Huang Z, Kan B, Wang D.	Int J Syst Evol Microbiol	10.1099/ijsem.0.002541	2018
Phylogeny	Proteus alimentorum sp. nov., isolated from pork and lobster in Ma'anshan city, China.	Dai H, Wang Y, Fang Y, Huang Z, Kan B, Wang D	Int J Syst Evol Microbiol	10.1099/ijsem.0.002689	2018

References

#1692	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4479
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#37129	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#68382	Automatically annotated from API zym .
#120971	Collection of Institut Pasteur ; Curators of the CIP; CIP 103181
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Proteus mirabilis (DSM 4479, ATCC 29906, CIP 103181)

Name and taxonomic classification

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