Name: Klebsiella pneumoniae PZH
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 4950

Type strain:

Species: Klebsiella pneumoniae

Strain Designation: PZH

Culture col. no.: DSM 4799, ATCC 25955, PZH 572

Strain history: <- ATCC <- Z. Schneider, PZH, 572 (Enterobacter aerogenes) <- B. Zagalak, PZH

NCBI tax ID(s): 1316938 (strain), 573 (species)

SI-ID 3120

LMG 3141, ATCC 25955, DSM 4799

Other strains from Klebsiella pneumoniae

Section

Klebsiella pneumoniae PZH is a mesophilic, Gram-negative human pathogen of the family Enterobacteriaceae.

Gram-negative
human pathogen
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Enterobacteriaceae*
	Genus	*Klebsiella*
	Species	**Klebsiella pneumoniae**
	Full Scientific Name (LPSN)	Klebsiella pneumoniae (Schroeter 1886) Trevisan 1887 (Approved Lists 1980)

Synonym

"Hyalococcus pneumoniae"

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.974

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1826]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #1826]

Culture medium growth

[Ref.: #1826]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1826]

Culture medium composition

expand / minimize

[Ref.: #1826]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #1826]

Culture medium growth

[Ref.: #1826]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1826]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1826]			growth	25 °C

[Ref.: #1826]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.948

[Ref.: #1826]

Name of produced compound

glycerol dehydrase

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68368]	amygdalin ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #68368]	D-glucose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	D-mannitol ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	gelatin ChEBI	-	hydrolysis	* from API 20E
[Ref.: #68368]	L-arabinose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	L-rhamnose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	lysine ChEBI	+	degradation	* from API 20E
[Ref.: #68368]	melibiose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	myo-inositol ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #68368]	sorbitol ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	sucrose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	+		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #68368]	cytochrome oxidase	-	1.9.3.1	* from API 20E
[Ref.: #68368]	gelatinase	-		* from API 20E
[Ref.: #68368]	lysine decarboxylase	+	4.1.1.18	* from API 20E
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #1826]	17859	+	-	+	-	+	-	-	-	-	+	-	+	+	+	+	+	+	+	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
[Ref.: #1826]	16713	+	-	+	-	+	-	+	-	-	+	-	+	+	+	+	+	+	+	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1826]	Pathogenicity (human)	yes
[Ref.: #1826]	Pathogenicity (animal)	yes
[Ref.: #1826]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Klebsiella pneumoniae ATCC 25955	GCA_000409715	contig	GenBank	1316938 tax ID	*
[Ref.: #66792]	Klebsiella pneumoniae ATCC 25955	1316938.3	wgs	PATRIC	1316938 tax ID	*
[Ref.: #66792]	Klebsiella pneumoniae ATCC 25955	2554235128	draft	JGI IMG/M	1316938 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Klebsiella pneumoniae ATCC 25955 PATRIC: 1316938.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Klebsiella pneumoniae ATCC 25955 PATRIC: 1316938.3
[Ref.: #69480]	motile	no	85.111	no
[Ref.: #69480]	gram-positive	no	97.212	no
[Ref.: #69480]	anaerobic	no	96.399	no
[Ref.: #69480]	halophile	no	87.614	no
[Ref.: #69480]	spore-forming	no	93.471	no
[Ref.: #69480]	glucose-util	yes	93.864	no
[Ref.: #69480]	flagellated	no	92.695	no
[Ref.: #69480]	thermophile	no	99.64	no
[Ref.: #69480]	aerobic	yes	90.944	no
[Ref.: #69480]	glucose-ferment	yes	91.204	yes

Availability in culture collections External links

[Ref.: #1826]

Culture collection no.

DSM 4799, ATCC 25955, PZH 572

[Ref.: #74446]

SI-ID 3120

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genome Sequence of Klebsiella pneumoniae Strain ATCC 25955, an Oxygen-Insensitive Producer of 1,3-Propanediol.	Wang Y, Tao F, Li C, Li L, Xu P	Genome Announc	10.1128/genomeA.00587-13	2013	*
Pathogenicity	Essential oil composition and antibacterial activity of Monticalia greenmaniana (Asteraceae).	Cardenas J, Rojas J, Rojas-Fermin L, Lucena M, Buitrago A	Nat Prod Commun		2012	*
Metabolism	Microbial fed-batch production of 1,3-propanediol using raw glycerol with suspended and immobilized Klebsiella pneumoniae.	Jun SA, Moon C, Kang CH, Kong SW, Sang BI, Um Y	Appl Biochem Biotechnol	10.1007/s12010-009-8839-x	2010	*
Metabolism	Production of 1,3-propanediol by Klebsiella pneumoniae.	Huang H, Gong CS, Tsao GT	Appl Biochem Biotechnol		2002	*
Metabolism	1,3-Propanediol production by Escherichia coli expressing genes from the Klebsiella pneumoniae dha regulon.	Tong IT, Liao HH, Cameron DC	Appl Environ Microbiol	10.1128/aem.57.12.3541-3546.1991	1991	*
Enzymology	[Coenzyme properties of adenosylcobalamin analogs with modifications in the purine nucleus of the alpha-ligand].	Iakusheva MI, Gurevich VM, Poznanskaia AA	Biokhimiia		1982	*
Metabolism	Glycerol fermentation in Klebsiella pneumoniae: functions of the coenzyme B12-dependent glycerol and diol dehydratases.	Forage RG, Foster MA	J Bacteriol	10.1128/jb.149.2.413-419.1982	1982	*
Enzymology	Immunochemical evidence for the difference between coenzyme-B12-dependent diol dehydratase and glycerol dehydratase.	Toraya T, Fukui S	Eur J Biochem	10.1111/j.1432-1033.1977.tb11594.x	1977	*
	[Effect of the structure of the nucleoside ligand of cobalamines on their enzymatic properties in a glycerol dehydratase system].	Iakusheva MI, Gurevich VM, Poznanskaia AA, Iakovlev VA, Khogenkamp G	Biokhimiia		1978	*

References

#1826

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4799

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68368

Automatically annotated from API 20E .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#74446

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID3120.1 )

* These data were automatically processed and therefore are not curated

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Klebsiella pneumoniae ATCC 25955

Klebsiella pneumoniae ATCC 25955

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