Name: Marinobacterium iners KW-40
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 459

Type strain:

Species: Marinobacterium iners

Strain Designation: KW-40

Culture col. no.: DSM 11526, ATCC 700074, JCM 21667, CIP 105236, IAM 15212, NBRC 102606, CECT 7200

Strain history: CIP <- 1997, J. Gonzales, Georgia Univ., Athens, GA, USA, Marinobacterium georgiense: strain KW-40

NCBI tax ID(s): 48076 (species)

SI-ID 43757

ATCC 700074, CIP 105236, DSM 11526, KCTC 12422, NCIMB 13851, JCM 21667, NBRC 102606, CECT 7200, IAM 15212

Other strains from Marinobacterium iners

M. iners JCM 20166, IAM 1445

Section

Marinobacterium iners KW-40 is a facultative aerobe, mesophilic, Gram-negative bacterium that forms circular colonies and was isolated from enrichment community growing on the high molecular weight fraction of a black liquor sample from the Federal Paper Board Company Inc..

colony-forming
Gram-negative
motile
rod-shaped
facultative aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Alteromonadaceae*
	Genus	*Marinobacterium*
	Species	**Marinobacterium iners**
	Full Scientific Name (LPSN)	Marinobacterium iners (Iizuka and Komagata 1964) Tindall 2020

	Synonym	Pseudomonas iners
	Synonym	Marinobacterium georgiense

Information on morphological and physiological properties Morphology

[Ref.: #23292]	Gram stain	negative
[Ref.: #120100]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.999

[Ref.: #23292]	Cell length	1.6-2.3 µm

[Ref.: #23292]	Cell width	0.5-0.7 µm

[Ref.: #23292]	Cell shape	rod-shaped
[Ref.: #120100]	Cell shape	rod-shaped

[Ref.: #23292]	Motility	yes
[Ref.: #120100]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %96.74

[Ref.: #23292]	Flagellum arrangement	monotrichous, polar

[Ref.: #23292]	Colony size	0.5 mm
[Ref.: #23292]	Colony color	translucent
[Ref.: #23292]	Colony shape	circular
[Ref.: #23292]	Incubation period	7 days
[Ref.: #23292]	Cultivation medium used	Marine agar 2216

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4401]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #4401]

Culture medium growth

[Ref.: #4401]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4401]

Culture medium composition

expand / minimize

[Ref.: #23292]

Culture medium

Marine agar (MA)

[Ref.: #23292]

Culture medium growth

[Ref.: #35796]

Culture medium

Marine agar (MA)

[Ref.: #35796]

Culture medium growth

[Ref.: #35796]

Culture medium composition

expand / minimize

[Ref.: #120100]

Culture medium

CIP Medium 13

[Ref.: #120100]

Culture medium growth

[Ref.: #120100]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #4401]		growth	28-37 °C
[Ref.: #23292]		growth	4-41 °C
[Ref.: #23292]		optimum	37 °C
[Ref.: #35796]		growth	30 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #120100]		growth	30-41 °C
[Ref.: #120100]	no	growth	5 °C
[Ref.: #120100]	no	growth	10 °C

[Ref.: #4401]	Temperature range	mesophilic
[Ref.: #23292]	Temperature range	mesophilic
[Ref.: #35796]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #120100]	Temperature range	psychrophilic

	pH	Kind of pH		pH
[Ref.: #23292]			optimum	7.5
[Ref.: #23292]			growth	5.5-9.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23292]	Oxygen tolerance	facultative aerobe
[Ref.: #120100]	Oxygen tolerance	obligate aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.994

	Salt	Tested relation		Salt conc.
[Ref.: #23292]	NaCl		growth	0.1-2	M
[Ref.: #23292]	NaCl		optimum	0.1-0.5	M
[Ref.: #120100]	NaCl		growth	2-6	%
[Ref.: #120100]	NaCl	no	growth	0	%
[Ref.: #120100]	NaCl	no	growth	8	%
[Ref.: #120100]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23292]	2-propanol ChEBI	+	growth
[Ref.: #23292]	3-hydroxybutyrate ChEBI	+	growth
[Ref.: #23292]	4-coumarate ChEBI	+	growth
[Ref.: #23292]	4-hydroxybenzoate ChEBI	+	growth
[Ref.: #23292]	acetate ChEBI	+	growth
[Ref.: #23292]	agar ChEBI	-	hydrolysis
[Ref.: #23292]	benzene ChEBI	-	growth
[Ref.: #23292]	benzoate ChEBI	+	growth
[Ref.: #23292]	butanol ChEBI	+	growth
[Ref.: #23292]	butyrate ChEBI	+	growth
[Ref.: #23292]	cellobiose ChEBI	+	growth
[Ref.: #23292]	chitin ChEBI	-	hydrolysis
[Ref.: #23292]	cinnamate ChEBI	+	growth
[Ref.: #23292]	citrate ChEBI	+	growth
[Ref.: #120100]	esculin ChEBI	-	hydrolysis
[Ref.: #23292]	ethanol ChEBI	+	growth
[Ref.: #23292]	ferulate ChEBI	+	growth
[Ref.: #23292]	formate ChEBI	+	growth
[Ref.: #23292]	fructose ChEBI	+	growth
[Ref.: #23292]	gelatin ChEBI	-	hydrolysis
[Ref.: #23292]	glucose ChEBI	-	builds acid from
[Ref.: #23292]	glucose ChEBI	+	growth
[Ref.: #23292]	glycerol ChEBI	+	growth
[Ref.: #23292]	glycine ChEBI	-	growth
[Ref.: #23292]	L-alanine ChEBI	+	growth
[Ref.: #23292]	L-arginine ChEBI	-	growth
[Ref.: #23292]	L-asparagine ChEBI	+	growth
[Ref.: #23292]	L-aspartate ChEBI	+	growth
[Ref.: #23292]	L-glutamate ChEBI	+	growth
[Ref.: #23292]	L-histidine ChEBI	-	growth
[Ref.: #23292]	L-isoleucine ChEBI	-	growth
[Ref.: #23292]	L-leucine ChEBI	-	growth
[Ref.: #23292]	L-lysine ChEBI	+	growth
[Ref.: #23292]	L-methionine ChEBI	-	growth
[Ref.: #23292]	L-phenylalanine ChEBI	+	growth
[Ref.: #23292]	L-proline ChEBI	+	growth
[Ref.: #23292]	L-serine ChEBI	-	growth
[Ref.: #23292]	L-threonine ChEBI	-	growth
[Ref.: #23292]	L-tryptophan ChEBI	-	growth
[Ref.: #23292]	L-valine ChEBI	-	growth
[Ref.: #23292]	lactose ChEBI	-	growth
[Ref.: #23292]	malate ChEBI	+	growth
[Ref.: #23292]	mannose ChEBI	+	growth
[Ref.: #23292]	methanol ChEBI	+	growth
[Ref.: #23292]	methylamine ChEBI	+	growth
[Ref.: #23292]	N-acetylglucosamine ChEBI	-	growth
[Ref.: #23292]	nitrate ChEBI	-	reduction
[Ref.: #120100]	nitrate ChEBI	-	reduction
[Ref.: #120100]	nitrate ChEBI	-	respiration
[Ref.: #120100]	nitrite ChEBI	-	reduction
[Ref.: #23292]	phenol ChEBI	+	growth
[Ref.: #23292]	propanol ChEBI	+	growth
[Ref.: #23292]	propionate ChEBI	+	growth
[Ref.: #23292]	pyruvate ChEBI	+	growth
[Ref.: #23292]	rhamnose ChEBI	-	growth
[Ref.: #23292]	salicylate ChEBI	-	growth
[Ref.: #23292]	starch ChEBI	-	hydrolysis
[Ref.: #23292]	succinate ChEBI	+	growth
[Ref.: #23292]	sucrose ChEBI	-	growth
[Ref.: #23292]	tween 80 ChEBI	+	hydrolysis
[Ref.: #23292]	vanillate ChEBI	+	growth
[Ref.: #23292]	xylose ChEBI	+	growth
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #23292]	ampicillin ChEBI	yes
[Ref.: #23292]	chloramphenicol ChEBI	yes
[Ref.: #23292]	kanamycin ChEBI	yes
[Ref.: #23292]	penicillin g ChEBI		yes
[Ref.: #23292]	streptomycin ChEBI	yes
[Ref.: #23292]	tetracycline ChEBI	yes
[Ref.: #23292]	vancomycin ChEBI		yes

	Metabolite production	Metabolite	Production
[Ref.: #120100]		indole ChEBI	no
[Ref.: #23292]		polyhydroxybutyrate ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #120100]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #120100]	amylase	-
[Ref.: #120100]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #120100]	caseinase	-	3.4.21.50
[Ref.: #23292]	catalase	+	1.11.1.6
[Ref.: #120100]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #23292]	cytochrome oxidase	+	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #120100]	gelatinase	-
[Ref.: #120100]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #120100]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #120100]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #120100]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #120100]	oxidase	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #120100]	tryptophan deaminase	-
[Ref.: #120100]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #120100]	1073	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	+	-	-	-	-	+	-	-	+	-	+

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #120100]	8551	-	+	+	-	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	L-lactaldehyde degradation	100	3 of 3
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	gluconeogenesis	100	8 of 8
[Ref.: #66794]	cyanate degradation	100	3 of 3
[Ref.: #66794]	valine metabolism	100	9 of 9
[Ref.: #66794]	butanoate fermentation	100	4 of 4
[Ref.: #66794]	ethanol fermentation	100	2 of 2
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	aspartate and asparagine metabolism	100	9 of 9
[Ref.: #66794]	gallate degradation	100	5 of 5
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	phenylacetate degradation (aerobic)	100	5 of 5
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	biotin biosynthesis	100	4 of 4
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	ubiquinone biosynthesis	100	7 of 7
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	glutamate and glutamine metabolism	96.43	27 of 28
[Ref.: #66794]	tetrahydrofolate metabolism	92.86	13 of 14
[Ref.: #66794]	leucine metabolism	92.31	12 of 13
[Ref.: #66794]	threonine metabolism	90	9 of 10
[Ref.: #66794]	4-hydroxyphenylacetate degradation	90	9 of 10
[Ref.: #66794]	lipid A biosynthesis	88.89	8 of 9
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	isoleucine metabolism	87.5	7 of 8
[Ref.: #66794]	C4 and CAM-carbon fixation	87.5	7 of 8
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	vitamin B1 metabolism	84.62	11 of 13
[Ref.: #66794]	methionine metabolism	84.62	22 of 26
[Ref.: #66794]	phenylalanine metabolism	84.62	11 of 13
[Ref.: #66794]	NAD metabolism	83.33	15 of 18
[Ref.: #66794]	vitamin B6 metabolism	81.82	9 of 11
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	3-phenylpropionate degradation	80	12 of 15
[Ref.: #66794]	glycine betaine biosynthesis	80	4 of 5
[Ref.: #66794]	hydrogen production	80	4 of 5
[Ref.: #66794]	heme metabolism	78.57	11 of 14
[Ref.: #66794]	citric acid cycle	78.57	11 of 14
[Ref.: #66794]	CO2 fixation in Crenarchaeota	77.78	7 of 9
[Ref.: #66794]	CMP-KDO biosynthesis	75	3 of 4
[Ref.: #66794]	cyclohexanol degradation	75	3 of 4
[Ref.: #66794]	androgen and estrogen metabolism	75	12 of 16
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	flavin biosynthesis	73.33	11 of 15
[Ref.: #66794]	pentose phosphate pathway	72.73	8 of 11
[Ref.: #66794]	proline metabolism	72.73	8 of 11
[Ref.: #66794]	alanine metabolism	72.41	21 of 29
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	reductive acetyl coenzyme A pathway	71.43	5 of 7
[Ref.: #66794]	propanol degradation	71.43	5 of 7
[Ref.: #66794]	tryptophan metabolism	71.05	27 of 38
[Ref.: #66794]	propionate fermentation	70	7 of 10
[Ref.: #66794]	purine metabolism	68.09	64 of 94
[Ref.: #66794]	d-mannose degradation	66.67	6 of 9
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	enterobactin biosynthesis	66.67	2 of 3
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	glycolate and glyoxylate degradation	66.67	4 of 6
[Ref.: #66794]	arginine metabolism	66.67	16 of 24
[Ref.: #66794]	phenol degradation	65	13 of 20
[Ref.: #66794]	glycolysis	64.71	11 of 17
[Ref.: #66794]	lipid metabolism	64.52	20 of 31
[Ref.: #66794]	pyrimidine metabolism	64.44	29 of 45
[Ref.: #66794]	glutathione metabolism	64.29	9 of 14
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	dTDPLrhamnose biosynthesis	62.5	5 of 8
[Ref.: #66794]	cysteine metabolism	61.11	11 of 18
[Ref.: #66794]	non-pathway related	60.53	23 of 38
[Ref.: #66794]	lipoate biosynthesis	60	3 of 5
[Ref.: #66794]	degradation of sugar alcohols	56.25	9 of 16
[Ref.: #66794]	4-hydroxymandelate degradation	55.56	5 of 9
[Ref.: #66794]	nitrate assimilation	55.56	5 of 9
[Ref.: #66794]	oxidative phosphorylation	54.95	50 of 91
[Ref.: #66794]	urea cycle	53.85	7 of 13
[Ref.: #66794]	sulfate reduction	53.85	7 of 13
[Ref.: #66794]	lysine metabolism	52.38	22 of 42
[Ref.: #66794]	histidine metabolism	51.72	15 of 29
[Ref.: #66794]	selenocysteine biosynthesis	50	3 of 6
[Ref.: #66794]	Entner Doudoroff pathway	50	5 of 10
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	pantothenate biosynthesis	50	3 of 6
[Ref.: #66794]	denitrification	50	1 of 2
[Ref.: #66794]	ribulose monophosphate pathway	50	1 of 2
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	lactate fermentation	50	2 of 4
[Ref.: #66794]	kanosamine biosynthesis II	50	1 of 2
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	glycogen biosynthesis	50	2 of 4
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	46.15	6 of 13
[Ref.: #66794]	degradation of hexoses	44.44	8 of 18
[Ref.: #66794]	mevalonate metabolism	42.86	3 of 7
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
[Ref.: #66794]	coenzyme M biosynthesis	40	4 of 10
[Ref.: #66794]	glycogen metabolism	40	2 of 5
[Ref.: #66794]	metabolism of amino sugars and derivatives	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	isoprenoid biosynthesis	38.46	10 of 26
[Ref.: #66794]	vitamin B12 metabolism	38.24	13 of 34
[Ref.: #66794]	carnitine metabolism	37.5	3 of 8
[Ref.: #66794]	tyrosine metabolism	35.71	5 of 14
[Ref.: #66794]	polyamine pathway	34.78	8 of 23
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	arachidonic acid metabolism	33.33	6 of 18
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	molybdenum cofactor biosynthesis	33.33	3 of 9
[Ref.: #66794]	degradation of pentoses	32.14	9 of 28
[Ref.: #66794]	phenylpropanoid biosynthesis	30.77	4 of 13
[Ref.: #66794]	benzoyl-CoA degradation	28.57	2 of 7
[Ref.: #66794]	metabolism of disaccharids	27.27	3 of 11
[Ref.: #66794]	carotenoid biosynthesis	27.27	6 of 22
[Ref.: #66794]	ascorbate metabolism	27.27	6 of 22
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	alginate biosynthesis	25	1 of 4
[Ref.: #66794]	degradation of sugar acids	24	6 of 25
[Ref.: #66794]	chlorophyll metabolism	22.22	4 of 18
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4401]	Sample type/isolated from	enrichment community growing on the high molecular weight fraction of a black liquor sample from the Federal Paper Board Company Inc.
[Ref.: #4401]	Geographic location (country and/or sea, region)	Georgia, Augusta
[Ref.: #4401]	Country	USA
[Ref.: #4401]	Country ISO 3 Code	USA
[Ref.: #4401]	Continent	North America

[Ref.: #23292]	Sample type/isolated from	salt marsh on the coast
[Ref.: #23292]	Enrichment culture	marine enrichment community growing on pulp mill eflluent as the sole carbon source

[Ref.: #67770]	Sample type/isolated from	Costal seawater
[Ref.: #67770]	Geographic location (country and/or sea, region)	GA
[Ref.: #67770]	Country	USA
[Ref.: #67770]	Country ISO 3 Code	USA
[Ref.: #67770]	Continent	North America

[Ref.: #120100]	Sample type/isolated from	Environment, Coastal seawater
[Ref.: #120100]	Geographic location (country and/or sea, region)	Georgia
[Ref.: #120100]	Country	United States of America
[Ref.: #120100]	Country ISO 3 Code	USA
[Ref.: #120100]	Continent	North America
[Ref.: #120100]	Isolation date	1994
* marker position based on {}

Isolation sources categories

#Engineered	#Industrial	#Industrial production
#Engineered	#Laboratory	#Lab enrichment
#Environmental	#Microbial community	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence U58339 (>99% sequence identity) for Marinobacterium georgiense subclade from Microbeatlas

Aquatic Samples	124
Soil Samples	10
Animal Samples	17
Plant Samples
Total Samples	151

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4401]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120100]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #4401]	Marinobacterium georgiense 16S ribosomal RNA gene, partial sequence	U58339	1435	ENA	48076 tax ID
[Ref.: #67770]	Marinobacterium georgiense gene for 16S rRNA, partial sequence, strain: NBRC 102606	AB681881	1468	ENA	48076 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Marinobacterium iners DSM 11526	GCA_900107855	scaffold	GenBank	1122198 tax ID
[Ref.: #66792]	Marinobacterium georgiense DSM 11526	1122198.3	wgs	PATRIC	1122198 tax ID	*
[Ref.: #66792]	Marinobacterium georgiense DSM 11526	2634166328	draft	JGI IMG/M	1122198 tax ID	*

[Ref.: #23292]

GC-content

54.9 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Marinobacterium georgiense DSM 11526 DSM 11526 NCBI: GCA_900107855.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Marinobacterium georgiense DSM 11526 PATRIC: 1122198.3
[Ref.: #69480]	motile	yes	93.988	yes
[Ref.: #69480]	flagellated	yes	94.616	no
[Ref.: #69480]	gram-positive	no	99.407	yes
[Ref.: #69480]	anaerobic	no	94.06	yes
[Ref.: #69480]	aerobic	yes	58.472	no
[Ref.: #69480]	halophile	yes	73.565	no
[Ref.: #69480]	spore-forming	no	93.93	no
[Ref.: #69480]	thermophile	no	99.172	yes
[Ref.: #69480]	glucose-util	yes	58.316	yes
[Ref.: #69480]	glucose-ferment	no	86.751	no

Availability in culture collections External links

[Ref.: #4401]

Culture collection no.

DSM 11526, ATCC 700074, JCM 21667, CIP 105236, IAM 15212, NBRC 102606, CECT 7200

[Ref.: #70138]

SI-ID 43757

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marinobacterium maritimum sp. nov., a marine bacterium isolated from Arctic sediment.	Kim SJ, Park SJ, Yoon DN, Park BJ, Choi BR, Lee DH, Roh Y, Rhee SK	Int J Syst Evol Microbiol	10.1099/ijs.0.009134-0	2009	*
Phylogeny	Marinobacterium halophilum sp. nov., a marine bacterium isolated from the Yellow Sea.	Chang HW, Nam YD, Kwon HY, Park JR, Lee JS, Yoon JH, An KG, Bae JW	Int J Syst Evol Microbiol	10.1099/ijs.0.64505-0	2007	*
Phylogeny	Microbulbifer hydrolyticus gen. nov., sp. nov., and Marinobacterium georgiense gen. nov., sp. nov., two marine bacteria from a lignin-rich pulp mill waste enrichment community.	Gonzalez JM, Mayer F, Moran MA, Hodson RE, Whitman WB	Int J Syst Bacteriol	10.1099/00207713-47-2-369	1997	*

References

#4401

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11526

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23292

J. M. GONZáLEZ, F. MAYER, M. A. MORAN, R. E. HODSON, W. B. WHITMAN: Microbulbifer hydrolyticus gen. nov., sp. nov., and Marinobacterium georgiense gen. nov., sp. nov., Two Marine Bacteria from a Lignin-Rich Pulp Mill Waste Enrichment Community. IJSEM 47: 369 - 376 1997 ( DOI 10.1099/00207713-47-2-369 , PubMed 9103623 )

#35796 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#70138

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID43757.1 )

#120100 Collection of Institut Pasteur ; Curators of the CIP; CIP 105236
* These data were automatically processed and therefore are not curated

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Marinobacterium georgiense DSM 11526 DSM 11526

Marinobacterium georgiense DSM 11526

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