Alteromonas stellipolaris (DSM 15672, LMG 21856, R-15462)

Name: Alteromonas stellipolaris (DSM 15672, LMG 21856, R-15462)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 446

Type strain

Strain Designation R-15462

Culture col. no. DSM 15672 LMG 21856 R-15462

NCBI tax ID(s) 1160720 233316

Special Collections DSMZ

History <- S. Van Trappen, Univ. Ghent, Belgium; R-15462 <- T.-L. Tan, AWI

Links

Alteromonas stellipolaris R-15462 is a psychrophilic prokaryote that was isolated from seawater.

psychrophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 23590

LMG 21856,DSM 15672

@ref 20215

Last LPSN update 2026-02-09 11:17:52

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Alteromonadaceae

Genus Alteromonas

Species Alteromonas stellipolaris

Full scientific name Alteromonas stellipolaris Van Trappen et al. 2004

Synonyms (1)

Alteromonas addita

BacDive ID	Other strains from **Alteromonas stellipolaris** (1)	Type strain
447	A. stellipolaris ANT69a, R-15466, DSM 15691, LMG 21861, CIP ... (type strain)

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	98.9
125438	negative	99.469

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
6026	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
6026	positive	growth	20	psychrophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.6

Spore formation

@ref	Spore formation	Confidence
125439		95.9
125438		90.286

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Geographic location	Continent	Latitude	Longitude
6026	seawater	Antarctic Sea (66° 21.9' S; 33° 46.7' E)	Australia and Oceania	-66.365	33.7783 -66.365/33.7783

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6026	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Alteromonas stellipolaris LMG21856	complete			2516493033	1160720	99.2
66792	ASM143371v1 assembly for Alteromonas stellipolaris LMG 21856	complete	GCA_001433715	1160720.10	2684623042	1160720	98.7
66792	Alteromonas_stellipolaris_LMG_21856 assembly for Alteromonas stellipolaris LMG 21856	contig	GCA_900069365	1160720.19		1160720	58.73

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Alteromonas stellaepolaris partial 16S rRNA gene, strain LMG 21856	AJ564723	742		1160720

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Alteromonas stellipolaris LMG 21856
PATRIC: 1160720.10

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.60	no
125439	gram_stain	BacteriaNetⓘ	negative	98.90	no
125439	motility	BacteriaNetⓘ	yes	62.10	no
125439	spore_formation	BacteriaNetⓘ	no	95.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Alteromonas stellipolaris LMG 21856 LMG 21856
NCBI: GCA_001433715.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.47	no
125438	anaerobic	anaerobicⓘ	no	96.72	no
125438	aerobic	aerobicⓘ	yes	74.10	no
125438	spore-forming	spore-formingⓘ	no	90.29	no
125438	thermophilic	thermophileⓘ	no	97.97	yes
125438	flagellated	motile2+ⓘ	yes	85.17	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Genomic analyses of two Alteromonas stellipolaris strains reveal traits with potential biotechnological applications.	Torres M, Hong KW, Chong TM, Reina JC, Chan KG, Dessaux Y, Llamas I.	Sci Rep	10.1038/s41598-018-37720-2	2019
Enzymology	Isolation and characterization of an agarase-producing bacterial strain, Alteromonas sp. GNUM-1, from the West Sea, Korea.	Kim J, Hong SK.	J Microbiol Biotechnol	10.4014/jmb.1209.08087	2012
Metabolism	Cloning, Expression and Characterization of a Novel Cold-adapted beta-galactosidase from the Deep-sea Bacterium Alteromonas sp. ML52.	Sun J, Yao C, Wang W, Zhuang Z, Liu J, Dai F, Hao J.	Mar Drugs	10.3390/md16120469	2018
Genetics	Genome Sequences of 72 Bacterial Strains Isolated from Ectocarpus subulatus: A Resource for Algal Microbiology.	Karimi E, Geslain E, KleinJan H, Tanguy G, Legeay E, Corre E, Dittami SM.	Genome Biol Evol	10.1093/gbe/evz278	2020
Genetics	Complete Genome Sequence of Alteromonas stellipolaris LMG 21856, a Budding Brown Pigment-Producing Oligotrophic Bacterium Isolated from the Southern Ocean.	Chen J, Wang X, Zhu S, Chen Y, Yang J	Genome Announc	10.1128/genomeA.00137-16	2016
Metabolism	Isolation and identification of a gene encoding 4-hydroxyphenylpyruvate dioxygenase from the red-brown pigment-producing bacterium Alteromonas stellipolaris LMG 21856.	Zhu S, Lu Y, Xu X, Chen J, Yang J, Ma X	Folia Microbiol (Praha)	10.1007/s12223-015-0386-y	2015
Phylogeny	Salinimonas sediminis sp. nov., a piezophilic bacterium isolated from a deep-sea sediment sample from the New Britain Trench.	Cao J, Lai Q, Liu P, Wei Y, Wang L, Liu R, Fang J.	Int J Syst Evol Microbiol	10.1099/ijsem.0.003055	2018
Phylogeny	Caenimonas terrae sp. nov., isolated from a soil sample in Korea, and emended description of the genus Caenimonas Ryu et al. 2008.	Kim SJ, Weon HY, Kim YS, Moon JY, Seok SJ, Hong SB, Kwon SW.	J Microbiol	10.1007/s12275-012-1587-6	2012
Enzymology	Limnohabitans curvus gen. nov., sp. nov., a planktonic bacterium isolated from a freshwater lake.	Hahn MW, Kasalicky V, Jezbera J, Brandt U, Jezberova J, Simek K.	Int J Syst Evol Microbiol	10.1099/ijs.0.013292-0	2010

References

#6026	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15672
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Alteromonas stellipolaris (DSM 15672, LMG 21856, R-15462)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001433715

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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