Name: Erwinia tasmaniensis Et1/99
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 4400

Type strain:

Species: Erwinia tasmaniensis

Strain Designation: Et1/99

Culture col. no.: DSM 17950, CIP 109463, NCPPB 4357

Strain history: CIP <- 2007, DSMZ <- K. Geider, BBA, Dossenhiem, Germany: strain Et1/99

NCBI tax ID(s): 338565 (species)

SI-ID 297172

DSM 17950, NCPPB 4357, CIP 109463, LMG 25318, CFBP 7177

Other strains from Erwinia tasmaniensis

E. tasmaniensis Et2/99, DSM 17949

Section

Erwinia tasmaniensis Et1/99 is an obligate aerobe, mesophilic, motile bacterium that was isolated from apple flowers.

motile
mesophilic
obligate aerobe
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Erwiniaceae*
	Genus	*Erwinia*
	Species	**Erwinia tasmaniensis**
	Full Scientific Name (LPSN)	Erwinia tasmaniensis Geider et al. 2006

Information on morphological and physiological properties Morphology

[Ref.: #123432]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.987

[Ref.: #123432]	Cell shape	rod-shaped

[Ref.: #123432]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %98.166

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7284]

Culture medium

REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a)

[Ref.: #7284]

Culture medium growth

[Ref.: #7284]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7284]

Culture medium composition

expand / minimize

[Ref.: #37568]

Culture medium

MEDIUM 328- for nutrient agar

[Ref.: #37568]

Culture medium growth

[Ref.: #37568]

Culture medium composition

expand / minimize

[Ref.: #123432]

Culture medium

CIP Medium 328

[Ref.: #123432]

Culture medium growth

[Ref.: #123432]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #7284]			growth	28 °C
[Ref.: #37568]			growth	30 °C

[Ref.: #7284]	Temperature range	mesophilic
[Ref.: #37568]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #123432]

Oxygen tolerance

obligate aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.958

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68368]	amygdalin ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #68368]	D-glucose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	D-mannitol ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	gelatin ChEBI	-	hydrolysis	* from API 20E
[Ref.: #68368]	L-arabinose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	L-rhamnose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #68368]	melibiose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	myo-inositol ChEBI	-	fermentation	* from API 20E
[Ref.: #123432]	nitrate ChEBI	-	reduction
[Ref.: #123432]	nitrite ChEBI	-	reduction
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #68368]	sorbitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	sucrose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #123432]	indole ChEBI	no
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	+		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #123432]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68368]	cytochrome oxidase	-	1.9.3.1	* from API 20E
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #68368]	gelatinase	-		* from API 20E
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #123432]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #123432]	urease	-	3.5.1.5
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #7284]	17891	+	-	-	-	+	-	-	-	-	+	-	+	+	-	-	-	+	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #123432]	11882	-	+	-	-	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7284]	Sample type/isolated from	apple flowers
[Ref.: #7284]	Geographic location (country and/or sea, region)	Tasmania
[Ref.: #7284]	Country	Australia
[Ref.: #7284]	Country ISO 3 Code	AUS
[Ref.: #7284]	Continent	Australia and Oceania

[Ref.: #123432]	Sample type/isolated from	Food, Apple flowers
[Ref.: #123432]	Geographic location (country and/or sea, region)	Victoria, Tasmania
[Ref.: #123432]	Country	Australia
[Ref.: #123432]	Country ISO 3 Code	AUS
[Ref.: #123432]	Continent	Australia and Oceania
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Tree
#Host Body-Site	#Plant	#Flower

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7284]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #123432]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Erwinia tasmaniensis Et1/99	642555128	complete	JGI IMG/M	465817 tax ID	*
[Ref.: #66792]	Erwinia tasmaniensis Et1/99	465817.25	plasmid	PATRIC	465817 tax ID	*
[Ref.: #66792]	Erwinia tasmaniensis Et1/99	465817.27	plasmid	PATRIC	465817 tax ID	*
[Ref.: #66792]	Erwinia tasmaniensis Et1/99	465817.24	plasmid	PATRIC	465817 tax ID	*
[Ref.: #66792]	Erwinia tasmaniensis Et1/99	465817.23	plasmid	PATRIC	465817 tax ID	*
[Ref.: #66792]	Erwinia tasmaniensis Et1/99	465817.26	plasmid	PATRIC	465817 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Erwinia tasmaniensis Et1/99 PATRIC: 465817.9
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Erwinia tasmaniensis Et1/99 Et1/99 NCBI: GCA_000026185.1
[Ref.: #69480]	motile	yes	91.199	no
[Ref.: #69480]	flagellated	no	54.049	no
[Ref.: #69480]	gram-positive	no	98.541	no
[Ref.: #69480]	anaerobic	no	98.257	no
[Ref.: #69480]	aerobic	no	63.051	no
[Ref.: #69480]	halophile	no	80.407	no
[Ref.: #69480]	spore-forming	no	95.382	no
[Ref.: #69480]	thermophile	no	98.956	yes
[Ref.: #69480]	glucose-util	yes	94.492	no
[Ref.: #69480]	glucose-ferment	yes	89.093	yes

Availability in culture collections External links

[Ref.: #7284]

Culture collection no.

DSM 17950, CIP 109463, NCPPB 4357

[Ref.: #73891]

SI-ID 297172

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Erwinia endophytica sp. nov., isolated from potato (Solanum tuberosum L.) stems.	Ramirez-Bahena MH, Salazar S, Cuesta MJ, Tejedor C, Igual JM, Fernandez-Pascual M, Peix A	Int J Syst Evol Microbiol	10.1099/ijsem.0.000820	2015	*
Metabolism	Tasmancin and lysogenic bacteriophages induced from Erwinia tasmaniensis strains.	Muller I, Lurz R, Geider K	Microbiol Res	10.1016/j.micres.2012.01.005	2012	*
Genetics	Complete genome sequence of the fire blight pathogen Erwinia pyrifoliae DSM 12163T and comparative genomic insights into plant pathogenicity.	Smits TH, Jaenicke S, Rezzonico F, Kamber T, Goesmann A, Frey JE, Duffy B	BMC Genomics	10.1186/1471-2164-11-2	2010	*
Genetics	The genome of Erwinia tasmaniensis strain Et1/99, a non-pathogenic bacterium in the genus Erwinia.	Kube M, Migdoll AM, Muller I, Kuhl H, Beck A, Reinhardt R, Geider K	Environ Microbiol	10.1111/j.1462-2920.2008.01639.x	2008	*
Phylogeny	Erwinia tasmaniensis sp. nov., a non-phytopathogenic bacterium from apple and pear trees.	Geider K, Auling G, Du Z, Jakovljevic V, Jock S, Volksch B	Int J Syst Evol Microbiol	10.1099/ijs.0.64032-0	2006	*

References

#7284

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17950

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#37568 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68368

Automatically annotated from API 20E .

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#73891

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID297172.1 )

#123432 Collection of Institut Pasteur ; Curators of the CIP; CIP 109463
* These data were automatically processed and therefore are not curated

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Erwinia tasmaniensis Et1/99

Erwinia tasmaniensis Et1/99 Et1/99

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