Enterobacter mori (DSM 26271, CGMCC 1.10322, LMG 25706)

Name: Enterobacter mori (DSM 26271, CGMCC 1.10322, LMG 25706)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 4384

Type strain

Strain Designation R18-2

Culture col. no. DSM 26271 CGMCC 1.10322 LMG 25706 R18-2

NCBI tax ID(s) 980518 539813

Special Collections DSMZ Literature strains

History <- LMG <- Zhejiang Univ., Hangzhou, China

Links

Enterobacter mori R18-2 is an anaerobe, spore-forming, mesophilic plant pathogen that was isolated from roots of diseased white mulberry plant Morus alba L..

spore-forming Gram-variable rod-shaped anaerobe mesophilic plant pathogen genome sequence 16S sequence

Name and taxonomic classification

SI-ID 369642

DSM 26271,LMG 25706,CGMCC 1.10322,CCUG 73596,CFBP 8200

@ref 20215

Last LPSN update 2026-02-09 11:18:42

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Enterobacteriaceae

Genus Enterobacter

Species Enterobacter mori

Full scientific name Enterobacter mori Zhu et al. 2011

Synonyms (1)

Enterobacter tabaci

BacDive ID	Other strains from **Enterobacter mori** (3)	Type strain
132602	E. mori DSM 28020, CGMCC 1.15707, KACC 17832, KCTC ... (type strain)
152760	E. mori CCUG 47562
161525	E. mori JCM 14687

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
31037	variable	2.5 µm	0.8 µm	rod-shaped
125438	negative				99.478
125439	negative				94.5

Multimedia

@ref:	18181
multimedia content:	DSM_26271.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_26271.jpg
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
18181	NUTRIENT AGAR (DSMZ Medium 1)		Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
18181	positive	growth	28	mesophilic
31037	positive	growth	50-70	thermophilic
31037	positive	optimum	65	thermophilic

Culture pH

@ref	Ability	Type	PH
31037	positive	optimum	7.5
31037	positive	growth	5.7-8.0

Physiology and metabolism

Oxygen tolerance

31037

Oxygen toleranceanaerobe

Spore formation

@ref	Spore formation	Confidence
31037
125439		93.6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68368	27613 ChEBI	amygdalin	+	fermentation	from API 20E
68368	29016 ChEBI	arginine	+	hydrolysis	from API 20E
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
68368	17634 ChEBI	D-glucose	+	fermentation	from API 20E
68368	16899 ChEBI	D-mannitol	+	fermentation	from API 20E
31037	28757 ChEBI	fructose	+	carbon source
31037	28260 ChEBI	galactose	+	carbon source
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
31037	17234 ChEBI	glucose	+	carbon source
68368	30849 ChEBI	L-arabinose	+	fermentation	from API 20E
68368	62345 ChEBI	L-rhamnose	+	fermentation	from API 20E
68368	25094 ChEBI	lysine	-	degradation	from API 20E
31037	37684 ChEBI	mannose	+	carbon source
68368	28053 ChEBI	melibiose	+	fermentation	from API 20E
68368	17268 ChEBI	myo-inositol	+	fermentation	from API 20E
68368	18257 ChEBI	ornithine	+	degradation	from API 20E
31037	15361 ChEBI	pyruvate	+	carbon source
31037	16634 ChEBI	raffinose	+	carbon source
31037	33942 ChEBI	ribose	+	carbon source
68368	30911 ChEBI	sorbitol	+	fermentation	from API 20E
31037	17992 ChEBI	sucrose	+	carbon source
68368	17992 ChEBI	sucrose	+	fermentation	from API 20E
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68368	16199 ChEBI	urea	-	hydrolysis	from API 20E
31037	18222 ChEBI	xylose	+	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68368	15688 ChEBI	acetoin	+		from API 20E
68368	35581 ChEBI	indole		-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68368	arginine dihydrolase	+	3.5.3.6	from API 20E
68368	beta-galactosidase	+	3.2.1.23	from API 20E
68368	cytochrome oxidase	-	1.9.3.1	from API 20E
68368	gelatinase	-		from API 20E
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68368	ornithine decarboxylase	+	4.1.1.17	from API 20E
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
68368	urease	-	3.5.1.5	from API 20E

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
18181	+	+	-	+	+	-	-	-	-	+	-	+	+	+	+	+	+	+	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	-	-
#Host	#Plants	#Tree
#Host Body-Site	#Plant	#Root (Rhizome)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
18181	roots of diseased white mulberry plant Morus alba L.	Morus alba	Zhejiang province, Hangzhou, Tonglu	China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence EU721605 (>99% sequence identity) for Enterobacterales from Microbeatlas

Aquatic Samples	888
Soil Samples	575
Animal Samples	11838
Plant Samples	920
Total Samples	14221

Interaction and safety

Risk assessment

@ref	Pathogenicity plant	Biosafety level	Biosafety level comment
18181		1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM21141v1 assembly for Enterobacter mori LMG 25706	scaffold	GCA_000211415	980518.3	2547132296	980518	45.14

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
18181	Enterobacter mori strain R18-2 16S ribosomal RNA gene, partial sequence	EU721605	1285	980518
124043	Enterobacter mori LMG 25706 16S ribosomal RNA gene, partial sequence.	OP818078	1405	980518
124043	Enterobacter mori LMG 25706 16S ribosomal RNA gene, partial sequence.	MG846019	1503	980518

GC content

31037

GC-content (mol%)54.6

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Enterobacter mori LMG 25706
NCBI: GCA_000211415

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	93.60	no
125439	motility	BacteriaNetⓘ	yes	62.80	no
125439	gram_stain	BacteriaNetⓘ	negative	94.50	no
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	74.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Enterobacter mori LMG 25706 LMG 25706
NCBI: GCA_000211415.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.48	yes
125438	anaerobic	anaerobicⓘ	no	73.33	yes
125438	aerobic	aerobicⓘ	no	63.70	no
125438	spore-forming	spore-formingⓘ	no	87.39	no
125438	thermophilic	thermophileⓘ	no	98.50	no
125438	flagellated	motile2+ⓘ	yes	78.37	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Whole genome sequencing of Enterobacter mori, an emerging pathogen of kiwifruit and the potential genetic adaptation to pathogenic lifestyle.	Zhang M, Zhang Y, Han X, Wang J, Yang Y, Ren B, Xia M, Li G, Fang R, He H, Jia Y.	AMB Express	10.1186/s13568-021-01290-w	2021
	First Report of Bacterial Wilt Caused by Enterobacter mori of Strawberry in Beijing, China	Ji S, Li H, Zhou Y, Li X, Yan J, Zhang W.	Plant Dis		2023
	Draft Genome Sequence of Enterobacter mori Strain NSE2, Isolated from the Rhizosphere of a Sedum sp.	Francois CJ, Batinovic S, Petrovski S, Gendall AR.	Microbiol Resour Announc	10.1128/mra.00487-21	2021
Genetics	Mitigation of Salt Stress in Rice by the Halotolerant Plant Growth-Promoting Bacterium Enterobacter asburiae D2.	Ning Z, Lin K, Gao M, Han X, Guan Q, Ji X, Yu S, Lu L.	J Xenobiot	10.3390/jox14010021	2024
	Identification of qnrE3 and qnrE4, New Transferable Quinolone Resistance qnrE Family Genes Originating from Enterobacter mori and Enterobacter asburiae, Respectively.	Wang C, Yin M, Zhang X, Guo Q, Wang M.	Antimicrob Agents Chemother	10.1128/aac.00456-21	2021
Genetics	High quality genome sequence and description of Enterobacter mori strain 5-4, isolated from a mixture of formation water and crude-oil.	Zhang F, Su S, Yu G, Zheng B, Shu F, Wang Z, Xiang T, Dong H, Zhang Z, Hou D, She Y.	Stand Genomic Sci	10.1186/1944-3277-10-9	2015
	Draft Genome Sequence of Hydrocarbon-Degrading Enterobacter cloacae Strain S1:CND1, Isolated from Crude Oil-Contaminated Soil from the Noonmati Oil Refinery, Guwahati, Assam, India.	Mukherjee A, Chettri B, Langpoklakpam JS, Singh AK, Chattopadhyay D.	Genome Announc	10.1128/genomea.00367-16	2016
	The Indiscriminate Chemical Makeup of Secondary Metabolites Derived from Endophytes Harvested from Aloe barbadensis Miller in South Africa's Limpopo Region.	Nchabeleng MM, Fonkui TY, Ezekiel G.	Molecules	10.3390/molecules29061297	2024
	Gut microbiome in type 1 diabetes: A comprehensive review.	Zheng P, Li Z, Zhou Z.	Diabetes Metab Res Rev	10.1002/dmrr.3043	2018
Phylogeny	dnaJ: a New Approach to Identify Species within the Genus Enterobacter.	Hernandez-Alonso E, Barreault S, Augusto LA, Jatteau P, Villet M, Tissieres P, Doucet-Populaire F, Bourgeois-Nicolaos N, SENSE Group.	Microbiol Spectr	10.1128/spectrum.01242-21	2021
	Holistic perspective of the role of gut microbes in diabetes mellitus and its management.	Alagiakrishnan K, Halverson T.	World J Diabetes	10.4239/wjd.v12.i9.1463	2021
Genetics	Metagenomic Profiling of Microbial Pathogens in the Little Bighorn River, Montana.	Hamner S, Brown BL, Hasan NA, Franklin MJ, Doyle J, Eggers MJ, Colwell RR, Ford TE.	Int J Environ Res Public Health	10.3390/ijerph16071097	2019
Phylogeny	A 16S rRNA Gene and Draft Genome Database for the Murine Oral Bacterial Community.	Joseph S, Aduse-Opoku J, Hashim A, Hanski E, Streich R, Knowles SCL, Pedersen AB, Wade WG, Curtis MA.	mSystems	10.1128/msystems.01222-20	2021
	Microbial antigen mimics activate diabetogenic CD8 T cells in NOD mice.	Tai N, Peng J, Liu F, Gulden E, Hu Y, Zhang X, Chen L, Wong FS, Wen L.	J Exp Med	10.1084/jem.20160526	2016
Metabolism	The dnd operon for DNA phosphorothioation modification system in Escherichia coli is located in diverse genomic islands.	Ho WS, Ou HY, Yeo CC, Thong KL.	BMC Genomics	10.1186/s12864-015-1421-8	2015
Genetics	Genome sequence of the Enterobacter mori type strain, LMG 25706, a pathogenic bacterium of Morus alba L.	Zhu B, Zhang GQ, Lou MM, Tian WX, Li B, Zhou XP, Wang GF, Liu H, Xie GL, Jin GL	J Bacteriol	10.1128/JB.05200-11	2011
	First Report of Bacterial Wilt Caused by Enterobacter mori of Strawberry in Beijing, China.	Ji S, Li H, Zhou Y, Li X, Yan J, Zhang W	Plant Dis	10.1094/PDIS-08-22-1895-PDN	2022
	Precise Species Identification for Enterobacter: a Genome Sequence-Based Study with Reporting of Two Novel Species, Enterobacter quasiroggenkampii sp. nov. and Enterobacter quasimori sp. nov.	Wu W, Feng Y, Zong Z.	mSystems	10.1128/msystems.00527-20	2020
Phylogeny	Enterobacter tabaci sp. nov., a novel member of the genus Enterobacter isolated from a tobacco stem.	Duan YQ, Zhou XK, Di-Yan L, Li QQ, Dang LZ, Zhang YG, Qiu LH, Nimaichand S, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-015-0569-1	2015
Phylogeny	Enterobacter xiangfangensis sp. nov., isolated from Chinese traditional sourdough, and reclassification of Enterobacter sacchari Zhu et al. 2013 as Kosakonia sacchari comb. nov.	Gu CT, Li CY, Yang LJ, Huo GC	Int J Syst Evol Microbiol	10.1099/ijs.0.064709-0	2014
Phylogeny	Enterobacter mori sp. nov., associated with bacterial wilt on Morus alba L.	Zhu B, Lou MM, Xie GL, Wang GF, Zhou Q, Wang F, Fang Y, Su T, Li B, Duan YP	Int J Syst Evol Microbiol	10.1099/ijs.0.028613-0	2011

References

#18181	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26271
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27367	IJSEM 4072 2013 ( DOI 10.1099/ijs.0.050369-0 , PubMed 23749275 )
#31037	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27367
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68368	Automatically annotated from API 20E .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Enterobacter mori (DSM 26271, CGMCC 1.10322, LMG 25706)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20E

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000211415

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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