[Ref.: #6555] |
Sample type/isolated from |
maize plant |
|
[Ref.: #48160] |
Sample type/isolated from |
Zea mays |
|
[Ref.: #118314] |
Sample type/isolated from |
Corn |
* marker position based on {}
|
|
Isolation sources categories |
#Host |
#Plants |
#Herbaceous plants (Grass,Crops) |
|
|
-
Information on genomic background e.g. entries in nucleic sequence databass Sequence information
|
16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
|
|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #124043] |
Enterobacter cloacae subsp. dissolvens strain ATCC 23373 16S ribosomal RNA gene, partial sequence. |
ON820233 |
890 |
|
69219 tax ID |
* |
[Ref.: #124043] |
Enterobacter cloacae subsp. dissolvens strain ATCC 23373 16S ribosomal RNA gene, partial sequence. |
OP818071 |
1402 |
|
69219 tax ID |
* |
[Ref.: #124043] |
Enterobacter cloacae subsp. dissolvens strain LMG 2683 16S ribosomal RNA gene, partial sequence. |
OP835885 |
1386 |
|
69219 tax ID |
* |
[Ref.: #20218] |
Enterobacter dissolvens partial 16S rRNA gene, strain ATCC 23373 |
AJ417485 |
420 |
|
69219 tax ID |
* |
[Ref.: #20218] |
Enterobacter cloacae subsp. dissolvens strain ATCC 23373 16S ribosomal RNA gene, partial sequence |
HQ651841 |
1507 |
|
69219 tax ID |
* |
[Ref.: #20218] |
Enterobacter cloacae subsp. cloacae strain DSMZ 16657 16S ribosomal RNA gene, partial sequence |
KF516256 |
1347 |
|
336306 tax ID |
* |
[Ref.: #20218] |
Enterobacter cloacae subsp. dissolvens strain LMG 2683 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence |
EU078570 |
991 |
|
69219 tax ID |
* |
[Ref.: #20218] |
Enterobacter dissolvens LMG 2683 16S ribosomal RNA |
Z96079 |
1495 |
|
69219 tax ID |
* |
|
|
Genome sequence information: |
|
|
Sequence accession description |
Seq. accession number |
Assembly level |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #67770] |
Enterobacter cloacae subsp. dissolvens ATCC 23373 |
GCA_009660455 |
contig |
|
69219 tax ID |
[Ref.: #66792] |
Enterobacter cloacae subsp. dissolvens strain ATCC 23373 |
69219.9 |
wgs |
|
69219 tax ID |
* |
|
[Ref.: #67770] |
GC-content |
54.5-55.5 mol% |
thermal denaturation, midpoint method (Tm) |
|
-
Availability in culture collections External links
[Ref.: #6555] |
Culture collection no. |
DSM 16657, ATCC 23373, CIP 105586, ICMP 1570, NCPPB 1850, NRRL B-154, CCUG 25230, LMG 2683, JCM 6049, ICPB ED 105, ICPB 1570 |
[Ref.: #73862] |
SI-ID 2213
|
* |
|
Literature: |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Phylogeny |
Enterobacter siamensis sp. nov., a transglutaminase-producing bacterium isolated from seafood processing wastewater in Thailand. |
Khunthongpan S, Bourneow C, H-Kittikun A, Tanasupawat S, Benjakul S, Sumpavapol P |
J Gen Appl Microbiol |
10.2323/jgam.59.135 |
2013 |
* |
Genetics |
Draft genome sequence of a novel bacterial strain, LSJC7, belonging to the family Enterobacteriaceae with dual resistance to arsenic and tetracycline. |
Su J, Ye J, Zhu Y |
J Bacteriol |
10.1128/JB.01652-12 |
2012 |
* |
Phylogeny |
Mangrovibacter plantisponsor gen. nov., sp. nov., a nitrogen-fixing bacterium isolated from a mangrove-associated wild rice (Porteresia coarctata Tateoka). |
Rameshkumar N, Lang E, Nair S |
Int J Syst Evol Microbiol |
10.1099/ijs.0.008292-0 |
2009 |
* |
Phylogeny |
A toxaphene-degrading bacterium related to Enterobacter cloacae, strain D1 isolated from aged contaminated soil in Nicaragua. |
Lacayo-Romero M, Quillaguaman J, van Bavel B, Mattiasson B |
Syst Appl Microbiol |
10.1016/j.syapm.2005.03.015 |
2005 |
* |
Phylogeny |
Reassignment of enterobacter dissolvens to Enterobacter cloacae as E. cloacae subspecies dissolvens comb. nov. and emended description of Enterobacter asburiae and Enterobacter kobei. |
Hoffmann H, Stindl S, Ludwig W, Stumpf A, Mehlen A, Heesemann J, Monget D, Schleifer KH, Roggenkamp A |
Syst Appl Microbiol |
10.1016/j.syapm.2004.12.010 |
2005 |
* |
|
- References
-
#6555 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 16657
|
-
-
-
#39321 |
; Curators of the CIP;
|
-
#48160 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 25230
|
-
-
#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
|
-
#68368 |
Automatically annotated from API 20E .
|
-
#68371 |
Automatically annotated from API 50CH acid .
|
-
#68382 |
Automatically annotated from API zym .
|
-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
-
-
#73862 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID2213.1 )
|
-
#118314 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 105586
|
-
#124043 |
Dr. Isabel Schober, Dr. Julia Koblitz:
Data extracted from sequence databases, automatically matched based on designation and taxonomy .
|
- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
|
|