Citrobacter braakii (DSM 17596, ATCC 51113, CCUG 30792)

Name: Citrobacter braakii (DSM 17596, ATCC 51113, CCUG 30792)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 4338

Type strain

Strain Designation 167, 80-58

Culture col. no. DSM 17596 ATCC 51113 CCUG 30792 CDC 80-58 CIP 104554 2 more

NCBI tax ID(s) 57706

Special Collections DSMZ CCUG CIP

History <- Collection des Bactéries de l' Institut Pasteur; <- P. A. D. Grimont, Inst. Pasteur, Paris, France; <- Center for Disease Control or Communicable Disease Center (CDC), United States Public Health Service, Atlanta, Georgia, USA; <- L. Le Minor; 167 CIP <- 1995, P.A.D. Grimont, Inst. Pasteur, Paris, France <- CDC: strain 80-58 <- L. Le Minor, Inst. Pasteur, Paris, France: strain 167

Links

Citrobacter braakii 167 is an aerobe, Gram-negative, motile bacterium that was isolated from snake.

Gram-negative motile rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 42809

ATCC 51113,CCUG 30792,CIP 104554,NCIMB 14000,DSM 17596,CNCTC 5070

@ref 20215

Last LPSN update 2026-02-09 11:18:42

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Enterobacteriaceae

Genus Citrobacter

Species Citrobacter braakii

Full scientific name Citrobacter braakii Brenner et al. 1993

BacDive ID	Other strains from **Citrobacter braakii** (18)	Type strain
4339	C. braakii M8B, M8BK, DSM 30040, ATCC 6750, CIP 110053, ...
136373	C. braakii 1249-78, CIP 105010
136757	C. braakii 2990-58, CIP 104927
137258	C. braakii CIP 53.62, NCTC 6021
137282	C. braakii 3158-63, CIP 104924
141267	C. braakii CCUG 489 G
141618	C. braakii CCUG 3819
141705	C. braakii CCUG 5011
141706	C. braakii CCUG 5016
141750	C. braakii CCUG 6228
146979	C. braakii CCUG 32589
147228	C. braakii CCUG 33100
147880	C. braakii CCUG 34426
150617	C. braakii CCUG 41766
150703	C. braakii CCUG 41989
151340	C. braakii CCUG 43795
171285	C. braakii CIMB 47, CIMB 04-3848, CRBIP17.47
176834	C. braakii DSM 120033, Imi 1b1

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
116986	negative	rod-shaped
125438	negative		99.5
125439	negative		90

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
39041	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
116986	CIP Medium 3	Medium recipe at CIP
7079	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
7079	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
7079	positive	growth	30
39041	positive	growth	30
50272	positive	growth	37
116986	positive	growth	10-41
116986	negative	growth	5

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
7079	aerobe
50272	aerobe
116986	facultative anaerobe

Spore formation

@ref	Spore formation	Confidence
125439		91.7

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68368	27613 ChEBI	amygdalin	-	fermentation	from API 20E
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
116986	16947 ChEBI	citrate	+	carbon source
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
68371	17108 ChEBI	D-arabinose	+	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68368	17634 ChEBI	D-glucose	+	fermentation	from API 20E
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68368	16899 ChEBI	D-mannitol	+	fermentation	from API 20E
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	+	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	+	builds acid from	from API 50CH acid
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68368	30849 ChEBI	L-arabinose	+	fermentation	from API 20E
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	+	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	+	builds acid from	from API 50CH acid
68368	62345 ChEBI	L-rhamnose	+	fermentation	from API 20E
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68368	25094 ChEBI	lysine	-	degradation	from API 20E
116986	15792 ChEBI	malonate	-	assimilation
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
116986	29864 ChEBI	mannitol	+	fermentation
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68368	28053 ChEBI	melibiose	+	fermentation	from API 20E
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68368	17268 ChEBI	myo-inositol	-	fermentation	from API 20E
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
116986	17632 ChEBI	nitrate	+	reduction
116986	16301 ChEBI	nitrite	+	reduction
68368	18257 ChEBI	ornithine	+	degradation	from API 20E
68371		Potassium 2-ketogluconate	+	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	+	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
116986	132112 ChEBI	sodium thiosulfate	+	builds gas from
68368	30911 ChEBI	sorbitol	+	fermentation	from API 20E
68368	17992 ChEBI	sucrose	-	fermentation	from API 20E
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68368	27897 ChEBI	tryptophan	+	energy source	from API 20E
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68368	16199 ChEBI	urea	-	hydrolysis	from API 20E
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
116986	35581 ChEBI	indole
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
116986	15688 ChEBI	acetoin	-
68368	15688 ChEBI	acetoin	-			from API 20E
116986	17234 ChEBI	glucose		+
68368	35581 ChEBI	indole			+	from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
116986	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68382	beta-galactosidase	+	3.2.1.23	from API zym
116986	beta-galactosidase	+	3.2.1.23
68368	beta-galactosidase	+	3.2.1.23	from API 20E
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
116986	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68368	cytochrome oxidase	-	1.9.3.1	from API 20E
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	-		from API zym
116986	gelatinase	-
68368	gelatinase	-		from API 20E
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
116986	lysine decarboxylase	-	4.1.1.18
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116986	ornithine decarboxylase	+	4.1.1.17
68368	ornithine decarboxylase	+	4.1.1.17	from API 20E
116986	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
116986	tryptophan deaminase	-
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
116986	urease	-	3.5.1.5
68368	urease	-	3.5.1.5	from API 20E
68382	valine arylamidase	-		from API zym

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
7079	+	-	-	+	+	+	-	-	+	-	-	+	+	-	+	+	-	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
116986	-	+	+	-	-	+	-	-	-	-	+	+	-	+	-	+	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
116986	not determinedn.d.	+	-	+	+	+	+	-	-	-	+	+	+	+	+/-	+	+	-	+	+	-	+/-	+	-	-	-	-	+/-	+	+	+/-	+/-	+	-	-	-	+/-	-	-	+/-	-	+/-	-	-	+	-	-	+	+	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
116986	not determinedn.d.	+	+	+	+	+	-	+	-	-	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	-	-	-	-	+	-	+	-	+	+	-	+	-	-	+	-	+	+	+	+	-	+	+	+	+	+	-	+	+	+	+	+	+	+	+	+	-	-	-	-	+	+	-	+	+	-	-	+	+	-	+	-	-	-	+	+	-	+	-	-	-	+	-	+	+	+	+	+	+	+	-	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host	#Reptilia

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
7079	snake	France	FRA	Europe
50272	Snake
116986	Snake	France	FRA	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7079	2	Risk group (German classification) According to TRBA 466
116986	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM1904880v1 assembly for Citrobacter braakii FDAARGOS 1421	complete	GCA_019048805	57706.144		57706	96.54
66792	ASM207534v1 assembly for Citrobacter braakii ATCC 51113	contig	GCA_002075345	57706.20	2878893965	57706	55.99

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Citrobacter braakii partial 16S rRNA gene, strain DSM 17596	HG798904	1427	57706
7079	Citrobacter braakii strain CDC 80-58 16S ribosomal RNA gene, partial sequence	AF025368	1530	57706
124043	Citrobacter braakii strain DSM 17596 16S ribosomal RNA gene, partial sequence.	OP164728	1438	57706
124043	Citrobacter braakii strain CIP 104554 16S ribosomal RNA gene, partial sequence.	KM515967	1446	57706

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Citrobacter braakii ATCC 51113
NCBI: GCA_002075345

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	91.70	no
125439	motility	BacteriaNetⓘ	yes	65.40	no
125439	gram_stain	BacteriaNetⓘ	negative	90.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	84.40	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Citrobacter braakii strain FDAARGOS 1421 strain Not applicable
PATRIC: 57706.144

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.50	no
125438	anaerobic	anaerobicⓘ	no	95.27	yes
125438	spore-forming	spore-formingⓘ	no	87.55	no
125438	aerobic	aerobicⓘ	no	72.40	no
125438	thermophilic	thermophileⓘ	no	98.00	yes
125438	flagellated	motile2+ⓘ	yes	75.03	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Whole-genome sequencing of coexisting bla_NDM-1, bla_KPC-2, and mcr-9.1 in a clinical carbapenem-resistant Citrobacter braakii isolate.	Sun F, Yu X, Zhang F, Ma J, Ji P.	J Glob Antimicrob Resist	10.1016/j.jgar.2025.05.027	2025
	[Regulatory role of SoxR in Citrobacter braakii JPG1 in physiological response to aerobic/anaerobic-menadione stress].	Xu Q, Gao L, Chen S, Zhang Y, Wang X.	Sheng Wu Gong Cheng Xue Bao	10.13345/j.cjb.240568	2025
	Molecular Identification of Spironucleus vortens From the Digestive Tract of Discus (Symphysodon discus Heckel, 1840) and Its Association With Mixed Bacterial Coinfection.	Pastuszka A, Puk K, Guz L.	J Fish Dis	10.1111/jfd.14070	2025
Transcriptome	Integrated Pathogen-Host Analysis of Citrobacter braakii SCGY-1L: Genomic Determinants and Host Transcriptional Dynamics During Infection.	Wang Z, Zhou T, Gu S, Yao J, Liu S, Mao J.	Microorganisms	10.3390/microorganisms13102310	2025
	A bacteriophage against Citrobacter braakii and its synergistic effect with antibiotics.	Liu S, Li H, Zhu Z, Wu M, Jin M, Wang X, Hou J, Li D, Wang R.	Arch Microbiol	10.1007/s00203-023-03803-6	2024
Metabolism	Selenium Metabolizing Capabilities of 12 Bacterial Strains Isolated from Urban Environmental Samples.	Kuroda M, Ishimoto I, Kameoka C, Kawanishi T, Saito R, Toki H, Yamagishi H, Watanabe Y, Tani Y.	Microorganisms	10.3390/microorganisms13071675	2025
	Citrobacter braakii Isolated from Salami and Soft Cheese: An Emerging Food Safety Hazard?	Pasquali F, Crippa C, Lucchi A, Francati S, Dindo ML, Manfreda G.	Foods	10.3390/foods14111887	2025
	Complete genome sequence of Citrobacter braakii ASE1 generated by PacBio sequencing.	Tran TD, Lee S, Hnasko R, McGarvey JA.	Microbiol Resour Announc	10.1128/mra.01000-23	2024
	Infection risk of peripheral intravenous catheters: meta-synthesis of 18 prospective studies with 14,606 catheters.	Rickard CM, Schults J, Mihala G, Larsen E, Marsh N, Runnegar N, Kleidon T, Ullman AJ, Keogh S, Ball D, Corley A, Bugden S, Ray-Barruel G.	Antimicrob Resist Infect Control	10.1186/s13756-025-01645-z	2025
	Quality changes, potential spoilage organisms, and shelf-life prediction of brackish river prawn (Macrobrachium macrobrachion) at different storage temperatures.	Dabade DS, Yessoufou N, Adido L, Azokpota P, Hounhouigan DJ.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2023.110344	2023
	Influence of a novel phytase on Ca and P digestibility in diets fed to sows in late-gestation and lactation	Espinosa CD, Torres-Mendoza LJ, Bergstrom JR, Stein HH.	Anim Feed Sci Technol		2024
Genetics	Characterization of cytotoxic Citrobacter braakii isolated from human stomach.	Yu M, Xie F, Xu C, Yu T, Wang Y, Liang S, Dong Q, Wang L.	FEBS Open Bio	10.1002/2211-5463.13770	2024
Genetics	Detecting plasmid-mediated dissemination of bla _KPC-3 and bla _OXA-48-like genes in Enterobacterales across Finnish healthcare organizations using hybrid genome assembly.	Piispa M, Vainio A, Halkilahti J, Lyytikainen O, Raisanen K.	Front Microbiol	10.3389/fmicb.2025.1567913	2025
Biotechnology	Prevalence of extended-spectrum beta-lactamase-producing Enterobacterales in edible ice in Thailand.	Amornchai P, Wuthiekanun V, Langla S, Wongsuvan G, Aramrueang P, Day NPJ, Limmathurotsakul D.	Int Health	10.1093/inthealth/ihae050	2025
	Implementation of convolutional neural networks for microbial colony recognition.	Kong F, Su M, Guo J, Wu H, Chen H, Qiu J, Huang J.	Microbiol Spectr	10.1128/spectrum.02885-24	2025
	Recurrent cellulitis associated with lymphoedema in Noonan syndrome: case reports with RIT1 variants and literature review	Kobayashi Y, Adachi T, Tahara U, Tanaka M, Arakawa H, Funatsu Y, Moritani K, Yamada M, Kosaki K, Inazumi T.	Hum Genome Var		2025
	Genomic insight into transmission mechanisms of carbapenem-producing Citrobacter spp. isolates between the WWTP and connecting rivers.	Wu T, Zou H, Xia H, Zhou Z, Zhao L, Meng M, Li Q, Guan Y, Li X.	Ecotoxicol Environ Saf	10.1016/j.ecoenv.2023.115150	2023
	Bacteremia due to carbapenem-resistant Citrobacter braakii.	Prasanna V, Rana R, Daunaria DK, Patel NB.	J Family Med Prim Care	10.4103/jfmpc.jfmpc_1685_21	2022
	Development of aptamers for rapid airborne bacteria detection.	Jeong IH, Kim HK, Kim HR, Kim J, Kim BC.	Anal Bioanal Chem	10.1007/s00216-022-04308-9	2022
	Molecular characterization of extended-spectrum beta-lactamases-producing Enterobacteriaceae species in ground beef and chicken meat.	Inat G, Siriken B, Ciftci A, Erol I, Baskan C, Yildirim T.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2023.110228	2023
	Healthcare professionals challenged by 14 distinct carbapenemase-producing micro-organisms in a war-injured Ukrainian patient.	Plantinga NL, van Asten SAV, Schijffelen MJ, de Wit RJ, Witteveen S, de Haan A, Landman F, Naiemi NA, Notermans DW, Hendrickx APA.	Infection	10.1007/s15010-025-02523-x	2025
	Poultry slaughterhouse wastewater as a source of bacterial antimicrobial resistance.	Nunes JF, da Costa Patricio TC, de Farias BO, de Souza HDF, Pimenta RL, Clementino MBM, de Souza MMS, da Silva Coelho I, de Mattos de Oliveira Coelho S.	Braz J Microbiol	10.1007/s42770-024-01466-z	2024
	Microbiological Profiles, Antibiotic Susceptibility Patterns and the Role of Multidrug-Resistant Organisms in Patients Diagnosed with Periprosthetic Joint Infection over 8 Years: Results from a Single-Center Observational Cohort Study from Romania.	Dragosloveanu S, Birlutiu RM, Neamtu B, Birlutiu V.	Microorganisms	10.3390/microorganisms13051168	2025
	Emphysematous Hemorrhagic Cystitis Discovered During Laparoscopy for Suspected Bowel Perforation: A Case Report and Review of Diagnostic Strategies.	Tapias E, O'Sullivan DMC, Baig MA, Creswell W, Mateja HL, Mashburn P.	Cureus	10.7759/cureus.69308	2024
	Association of Rahnella victoriana, Enterobacter hormaechei subsp. hoffmannii and Citrobacter braakii with walnut decline.	Hajialigol M, Falahi Charkhabi N, Shahryari F, Sarikhani S.	Sci Rep	10.1038/s41598-023-38427-9	2023
	Multidrug-Resistant Bacteria in Aquaculture Systems in Accra, Ghana.	Dayie NTKD, Nathan-Mensah FNN, Kotey FCN, Tabi BKA, Kabotso DEK, Odoom A, Hotor P, Dayie AD, Tetteh-Quarcoo PB, Egyir B, Donkor ES.	Environ Health Insights	10.1177/11786302241299369	2024
	Carbapenem resistance and biofilm formation status of Enterobacterales isolated from raw milk via molecular versus phenotypic methods.	Ozdikmenli Tepeli S, Numanoglu Cevik Y, Tosun MN, Taylan Yalcin G, Kaya B, Ipek D, Bakkaloglu Z, Simsek H, Zorba NN.	Antonie Van Leeuwenhoek	10.1007/s10482-022-01799-5	2023
	A Case of Green Nail Syndrome Diagnosed in the Emergency Department.	Carhart P, Espinosa J, Lucerna A.	Cureus	10.7759/cureus.57032	2024
	Characterization and evaluation of the therapeutic benefits of pure and lanthanides mono- and co-doped zinc oxide nanoparticles.	Al Bitar M, Hassanieh B, Awad R, Khalil M.	Saudi J Biol Sci	10.1016/j.sjbs.2023.103608	2023
	Comparison of automatic methods MALDI-TOF, VITEK2 and manual methods for the identification of intestinal microbial communities on the example of samples from alpacas (Vicugna pacos).	Plawinska-Czarnak J, Wodz K, Strzalkowska Z, Zychska M, Nowak T, Kwiecinski A, Kwiecinski P, Bielecki W, Rodo A, Rzewuska M, Klosinska D, Anusz K, Orlowska B.	J Vet Res	10.2478/jvetres-2023-0051	2023
	Green nail syndrome caused by Citrobacter braakii.	Mulita F, Tchabashvili L, Liolis E, Tasios K, Iliopoulos F, Kaplanis C, Parchas N, Plachouri KM.	Clin Case Rep	10.1002/ccr3.4203	2021
	Cultivable Gut Microbiota in Synanthropic Bats: Shifts of Its Composition and Diversity Associated with Hibernation.	Popov IV, Berezinskaia IS, Popov IV, Martiusheva IB, Tkacheva EV, Gorobets VE, Tikhmeneva IA, Aleshukina AV, Tverdokhlebova TI, Chikindas ML, Venema K, Ermakov AM.	Animals (Basel)	10.3390/ani13233658	2023
	Citrobacter braakii CLABSI in a hematopoietic stem cell transplant patient.	Tollkuci E, Myers R.	J Oncol Pharm Pract	10.1177/10781552211001423	2021
	Elevated serum CA 19-9 level mimicking pancreaticobiliary carcinoma from a hepatic abscess: case report and literature review.	Dhingra S, Raman P, Ramsaroop T, Harrison I, Bergsten T, Nusbaum E, Feldman LE.	Front Med (Lausanne)	10.3389/fmed.2024.1470046	2024
	Novel Coating Approaches for Polyethylene Biliary Stents to Reduce Microbial Adhesion, Prevent Biofilm Formation, and Prolong Stent Patency	Wagner L, Stolte P, Heller S, Schippers D, Pforringer D, Tubel J, Schmid R, Burgkart R, Schneider J, Obermeier A.	Biomedicines		2025
	Carbapenem-resistant Enterobacteriaceae in the livestock, humans and environmental samples around the globe: a systematic review and meta-analysis.	Tuhamize B, Bazira J.	Sci Rep	10.1038/s41598-024-64992-8	2024
Genetics	Surface water in Lower Saxony: A reservoir for multidrug-resistant Enterobacterales.	Cimen C, Noster J, Stelzer Y, Rump A, Sattler J, Berends M, Voss A, Hamprecht A.	One Health	10.1016/j.onehlt.2023.100606	2023
	Draft Genome Sequence of a bla_KPC-2-Carrying Citrobacter braakii Isolate from Pediatric Hospital Wastewater in Peru.	Salvatierra G, Davila-Barclay A, Ayzanoa B, Cuicapuza D, Santillan-Salas C, Tsukayama P.	Microbiol Resour Announc	10.1128/mra.00569-21	2021
Genetics	Co-Production of NDM-1 and OXA-10 beta-Lactamase in Citrobacter braakii Strain Causing Urinary Tract Infection.	Han H, Zhao Z, Lin Y, Lin B, Xu H, Zheng B.	Infect Drug Resist	10.2147/idr.s347943	2022
Enzymology	Improved Thermal Stability of a Novel Acidophilic Phytase.	Son BS, Kim SH, Sagong HY, Lee SR, Choi EJ.	J Microbiol Biotechnol	10.4014/jmb.2311.11044	2024
	Characterization of persistent organic pollutants and culturable and non-culturable bacterial communities in pulp and paper sludge after secondary treatment.	Tripathi S, Yadav S, Purchase D, Singh K, Al-Shwaiman HA, Chandra R.	Chemosphere	10.1016/j.chemosphere.2022.133892	2022
	Citrobacter braakii Yield False-Positive Identification as Salmonella, a Note of Caution.	Plawinska-Czarnak J, Wodz K, Kizerwetter-Swida M, Nowak T, Bogdan J, Kwiecinski P, Kwiecinski A, Anusz K.	Foods	10.3390/foods10092177	2021
	Pathogenic Potential of Opportunistic Gram-Negative Bacteria Isolated from the Cloacal Microbiota of Free-Living Reptile Hosts Originating from Bulgaria.	Lazarkevich I, Engibarov S, Mitova S, Popova S, Vacheva E, Stanchev N, Eneva R, Gocheva Y, Lalovska I, Paunova-Krasteva T, Ilieva Y, Najdenski H.	Life (Basel)	10.3390/life14050566	2024
	In Vitro Activity of Cefiderocol Against Carbapenem-Resistant Enterobacterales and Pseudomonas aeruginosa.	Malisova L, Vrbova I, Pomorska K, Jakubu V, Zemlickova H.	Microb Drug Resist	10.1089/mdr.2023.0090	2023
	Generation of phytase chimeras with low sequence identities and improved thermal stability.	Herrmann KR, Hofmann I, Jungherz D, Wittwer M, Infanzon B, Hamer SN, Davari MD, Ruff AJ, Schwaneberg U.	J Biotechnol	10.1016/j.jbiotec.2021.07.005	2021
	Occurrence of antibiotic resistance among Enterobacterales isolated from raw and ready-to-eat food - phenotypic and genotypic characteristics.	Zarzecka U, Chajecka-Wierzchowska W, Zadernowska A.	Int J Environ Health Res	10.1080/09603123.2021.1908522	2022
	A review on comparative analysis of marine and freshwater fish gut microbiomes: insights into environmental impact on gut microbiota.	Singh BK, Thakur K, Kumari H, Mahajan D, Sharma D, Sharma AK, Kumar S, Singh B, Pankaj PP, Kumar R.	FEMS Microbiol Ecol	10.1093/femsec/fiae169	2025
	Dried Herbs as an Easy-to-Use and Cost-Effective Alternative to Essential Oils to Extend the Shelf Life of Sheep Lump Cheese.	Kunova S, Taglieri I, Hascik P, Ben Hsouna A, Mnif W, Venturi F, Sanmartin C, Cmikova N, Kluz MI, Kacaniova M.	Foods	10.3390/foods12244487	2023
	Bad Connection: Stent-to-Stent Fistulization After Common Bile Duct and Transjugular Intrahepatic Portosystemic Shunt Stenting.	Issac AG, Youngblood A, Enunwa C, Veeramachaneni H, Khare A, Razvi M, Levert FE.	ACG Case Rep J	10.14309/crj.0000000000001041	2023
	Molecular characterization, virulence and antimicrobial and biocidal susceptibility of selected bacteria isolated from the cloaca of nestling ospreys (Pandion haliaetus) from Mono Lake, California, USA.	Loncaric I, Szostak MP, Cabal-Rosel A, Grunzweil OM, Riegelnegg A, Misic D, Muller E, Fessler AT, Braun SD, Schwarz S, Monecke S, Ehricht R, Ruppitsch W, Spergser J, Lewis A, Bloom PH, Saggese MD.	PLoS One	10.1371/journal.pone.0311306	2024
Enzymology	A novel phytase from Citrobactergillenii: characterization and expression in Pichia pastoris (Komagataella pastoris).	Tkachenko AA, Kalinina AN, Borshchevskaya LN, Sineoky SP, Gordeeva TL.	FEMS Microbiol Lett	10.1093/femsle/fnaa217	2021
Genetics	Occurrence, Typing, and Resistance Genes of ESBL/AmpC-Producing Enterobacterales in Fresh Vegetables Purchased in Central Israel.	Kon H, Lurie-Weinberger M, Cohen A, Metsamber L, Keren-Paz A, Schwartz D, Carmeli Y, Schechner V.	Antibiotics (Basel)	10.3390/antibiotics12101528	2023
Genetics	Bacteremia Caused by a Putative Novel Species in the Genus Erwinia: A Case Report and Genomic Analysis	Lee J, Kim T, Park H, Park J.	Life (Basel)		2025
Biotechnology	Contamination and Biofilm Formation of Foodborne and Opportunistic Pathogens in Yellow-Feathered Chicken Carcass.	Liu Y, Wu H, Sun Z, Xu X, Liu F.	Foodborne Pathog Dis	10.1089/fpd.2020.2876	2021
	Acute phase proteins patterns as biomarkers in bacterial infection: Recent insights.	Ali AA, Darwish WS.	Open Vet J	10.5455/ovj.2024.v14.i10.4	2024
	Comparative analysis of the postadmission and antemortem oropharyngeal and rectal swab microbiota of ICU patients.	Petrilla A, Nemeth P, Fauszt P, Szilagyi-Racz A, Mikolas M, Szilagyi-Tolnai E, David P, Stagel A, Gal F, Gal K, Sohajda R, Pham T, Stundl L, Biro S, Remenyik J, Paholcsek M.	Sci Rep	10.1038/s41598-024-78102-1	2024
Genetics	Nationwide molecular epidemiology of carbapenemase-producing Citrobacter spp. in France in 2019 and 2020.	Biez L, Bonnin RA, Emeraud C, Birer A, Jousset AB, Naas T, Dortet L.	mSphere	10.1128/msphere.00366-23	2023
	REL/DPA/AVI method: a novel approach for rapid detection of carbapenemase-producing Enterobacterales directly from positive blood cultures based on optical density.	Zhao C, Zhu J, Xiao Y, Li F, Zheng Y, Gu S, Hang Y, Zhong Q, Hu L.	J Clin Microbiol	10.1128/jcm.01960-24	2025
	Polishing the Oxford Nanopore long-read assemblies of bacterial pathogens with Illumina short reads to improve genomic analyses.	Chen Z, Erickson DL, Meng J.	Genomics	10.1016/j.ygeno.2021.03.018	2021
Phylogeny	Healthcare-related transmission of mobile genetic elements co-carrying bla _NDM and 16S rRNA methyltransferase genes in multiple Enterobacterales.	Maguire M, Serna C, Delgado-Blas JF, Clarke C, DeLappe N, Cormican M, Coughlan SC, Miliotis G, Gonzalez-Zorn B, Burke LP.	Microb Genom	10.1099/mgen.0.001473	2025
	Evaluation of a novel phytase derived from Citrobacter braakii and expressed in Aspergillis oryzae on growth performance and bone mineralization indicators in nursery pigs.	Reeb ME, Woodworth JC, Goodband RD, Tokach MD, DeRouchey JM, Gebhardt JT, Bergstrom JR.	J Anim Sci	10.1093/jas/skad306	2023
	Increasing Doses of Bacterial Phytase (Citrobacter braakii) Improves Performance and Carcass Characteristics of Pigs in Growing and Finishing Phases.	da Silva CA, Callegari MA, Dias CP, de Souza KL, de Carvalho RH, Alebrante L, da Silva Martins CC, Heck A, Fascina VB.	Animals (Basel)	10.3390/ani12192552	2022
	Transgenerational Cold Acclimation and Contribution of Gut Bacteria in Spodoptera frugiperda.	Song Y, Yu GY, Gao W, Mai YT, Xu J, Fu W, Zhang ZX.	Insects	10.3390/insects16101052	2025
	Feasibility of Using Ceftazidime-Avibactam as a Therapeutic Option for Bloodstream Infections Caused by Multidrug-Resistant Enterobacterales and Pseudomonas aeruginosa Based on Its Susceptibility Profile.	Priyadarshi K, Dhandapani S, Sivaradjy M, Shanmugam L, Sastry AS.	Cureus	10.7759/cureus.37002	2023
	Molecular analysis of clinical Citrobacter spp. isolates: Acquisition of the Yersinia high-pathogenicity island mediated by ICEkp in C. freundii.	Zhang G, Zhao Q, Ye K, Ye L, Ma Y, Yang J.	Front Microbiol	10.3389/fmicb.2023.1056790	2023
	Quality of Life After Severe Burn Injury: A Case Report.	Eisler W, Held M, Wenger A, van der Merwe U, Daigeler A, Krauss S.	Ann Burns Fire Disasters		2022
	Antimicrobial susceptibility to last-resort antibiotics in carbapenemase-producing bacteria from Ukrainian patients.	Verkaik NJ, Wielders CCH, den Boer H, Langerak D, Vogel M, Witteveen S, de Haan A, Bos J, van Westreenen M, Notermans DW, Hendrickx APA, participating laboratories, SWAB Working Group Surveillance of Antimicrobial Resistance.	Microbiol Spectr	10.1128/spectrum.01142-24	2024
Phylogeny	Characterization of Actinobacteria strains in Lebanese soil with an emphasis on investigating their antibacterial activity.	Zahr R, Zahr S, El Hajj R, Khalil M.	Braz J Microbiol	10.1007/s42770-023-01242-5	2024
	Unique Regulation of Sed-1 beta-Lactamase in Citrobacter sedlakii: Insights on Resistance to Third-Generation Cephalosporin	Watanabe M, Nakano R, Yamamoto K, Nakano A, Suzuki Y, Saito K, Nakashima S, Endo K, Narita K, Yano H.	Antibiotics (Basel)		2025
Genetics	The Bacteriophage vB_CbrM_HP1 Protects Crucian Carp Against Citrobacter braakii Infection.	Huang C, Feng C, Liu X, Zhao R, Wang Z, Xi H, Ou H, Han W, Guo Z, Gu J, Zhang L.	Front Vet Sci	10.3389/fvets.2022.888561	2022
	A Surveillance Study of Culturable and Antimicrobial-Resistant Bacteria in Two Urban WWTPs in Northern Spain.	Pino-Hurtado MS, Fernandez-Fernandez R, Campana-Burguet A, Gonzalez-Azcona C, Lozano C, Zarazaga M, Torres C.	Antibiotics (Basel)	10.3390/antibiotics13100955	2024
	Genomic characterization of a multidrug-resistant Citrobacter portucalensis isolate co-harboring bla _KPC-2 and bla _NDM-1 on distinct plasmids.	Huang J, Shen K, Chen K, Wu J, Zhu Y, Shi J.	Front Microbiol	10.3389/fmicb.2025.1633493	2025
	Evaluation of the bioresistance profile of enterobacteria isolated from faeces of children with diarrhoea in the town of Koula-Moutou, Gabon: prospective study.	Mabika RM, Liabagui SLO, Mounioko F, Souza A, Yala JF.	Pan Afr Med J	10.11604/pamj.2022.43.63.25276	2022
	Identification and Antibiotic Resistance of Isolates from Poultry Meat and Poultry Meat By-Products Exhibiting Characteristic Salmonella Morphology on Chromogenic Agar.	Panera-Martinez S, Rodriguez-Melcon C, Gonzalez-Machado C, Alonso-Calleja C, Capita R.	Antibiotics (Basel)	10.3390/antibiotics14060540	2025
	Antimicrobial resistance among agents of hospital-acquired lower respiratory tract infection in the UK and Ireland: trends from 2008/2009 to 2018/2019.	Reynolds R, Morrissey I, Mushtaq S, Horner C, Adkin R, Chaudhry A, Allen M, Longshaw C, Parcell BJ, Livermore DM.	J Antimicrob Chemother	10.1093/jac/dkaf251	2025
	Performance of Ertapenem-Supplemented MacConkey Agar (MacErt) for Detecting Carbapenemase-Producing Enterobacterales.	Sow O, Cisse A, Ndiaye I, Niang EA, Kane FT, Cisse K, Gueye AB, Bawa AA, Fall C, Dieye Y, Sambe B, Seck A.	Cureus	10.7759/cureus.74106	2024
	Evaluation of canine raw food products for the presence of extended-spectrum beta-lactamase- and carbapenemase-producing bacteria of the order Enterobacterales.	Cole SD, Healy I, Dietrich JM, Redding LE.	Am J Vet Res	10.2460/ajvr.21.12.0205	2022
	[Septic shock due to Citrobacter braakii following high-dose cytosine arabinoside therapy in a patient with acute myeloid leukemia].	Seo H, Manabe M, Ogata Y, Uchida T, Momose D, Sugano Y, Koh KR.	Rinsho Ketsueki	10.11406/rinketsu.59.492	2018
	Research and molecular characteristic of Shiga toxin-producing Escherichia coli isolated from sheep carcasses.	Ferhat L, Chahed A, Hamrouche S, Korichi-Ouar M, Hamdi TM.	Lett Appl Microbiol	10.1111/lam.13142	2019
Genetics	Functional modulation of the human gut microbiome by bacteria vehicled by cheese.	Milani C, Longhi G, Alessandri G, Fontana F, Viglioli M, Tarracchini C, Mancabelli L, Lugli GA, Petraro S, Argentini C, Anzalone R, Viappiani A, Carli E, Vacondio F, van Sinderen D, Turroni F, Mor M, Ventura M.	Appl Environ Microbiol	10.1128/aem.00180-25	2025
Genetics	Comprehensive genome catalog analysis of the resistome, virulome and mobilome in the wild rodent gut microbiota.	Shang KM, Ma H, Elsheikha HM, Wei YJ, Zhao JX, Qin Y, Li JM, Zhao ZY, Zhang XX.	NPJ Biofilms Microbiomes	10.1038/s41522-025-00746-2	2025
	Epidemiological Description and Detection of Antimicrobial Resistance in Various Aquatic Sites in Marseille, France.	El-Sawalhi S, Revol O, Chamieh A, Lacoste A, Annessi A, La Scola B, Rolain JM, Pagnier I.	Microbiol Spectr	10.1128/spectrum.01426-22	2023
	Bacteriological Identification, Characterization and Changes of Feces Microbiome in Prostate Cancer Patients Undergoing Radiotherapy.	Florkiewicz AB, Fijalkowski P, Fijalkowski P, Zloch M, Ludwiczak A, Gabrys D, Mista W, Mrochem-Kwarciak J, Jedrzejewska A, Telka E, Rabsztyn M, Czeszewska-Rosiak G, Mametov R, Tretyn A, Pomastowski P.	Cancer Manag Res	10.2147/cmar.s517416	2025
	Isolation, Identification, and Antibiotic Resistance, CRISPR System Analysis of Escherichia coli from Forest Musk Deer in Western China.	Yang K, Wu X, Ding H, Ma B, Li Z, Wang Y, Yang Z, Yao X, Luo Y.	Microorganisms	10.3390/microorganisms13071683	2025
	Bacteriological Studies of Venomous Snakebite Wounds in Hangzhou, Southeast China.	Hu S, Lou Z, Shen Y, Tu M.	Am J Trop Med Hyg	10.4269/ajtmh.21-1314	2022
	Draft Genome Sequences of Eight Canadian Citrobacter braakii and Citrobacter freundii Strains.	Duceppe MO, Phipps-Todd B, Carrillo C, Huang H.	Microbiol Resour Announc	10.1128/mra.00273-19	2019
	Markers of intestinal mucositis to predict blood stream infections at the onset of fever during treatment for childhood acute leukemia.	Weischendorff S, Rathe M, Petersen MJ, Weimann A, Enevold C, Nielsen CH, Als-Nielsen B, Nygaard U, Moser C, Muller K.	Leukemia	10.1038/s41375-023-02077-7	2024
	Comparative genomic characterization of multidrug-resistant Citrobacter spp. strains in Fennec fox imported to China.	Qin J, Zhao Y, Wang A, Chi X, Wen P, Li S, Wu L, Bi S, Xu H, Xu H.	Gut Pathog	10.1186/s13099-021-00458-w	2021
	Antibiotic-resistant bacteria contaminating leafy vegetables in Saudi Arabia's eastern region.	Elsafi SH, Al Zahrani EM, Al Zaid RF, Alshagifi SA, Farghal TA, Alshamuse KB, Albalawi AS, Alkhalaf F, Sumaily AA, Almusabi S, George SK.	BMC Microbiol	10.1186/s12866-024-03456-5	2024
Phylogeny	Isolation and characterization of Septuagintavirus; a novel clade of Escherichia coli phages within the subfamily Vequintavirinae.	Cortes-Martin A, Buttimer C, Pozhydaieva N, Hille F, Shareefdeen H, Bolocan AS, Draper LA, Shkoporov AN, Franz CMAP, Hofer K, Ross RP, Hill C.	Microbiol Spectr	10.1128/spectrum.00592-24	2024
	Antimicrobial Activities of Aztreonam-Avibactam and Comparator Agents against Enterobacterales Analyzed by ICU and Non-ICU Wards, Infection Sources, and Geographic Regions: ATLAS Program 2016-2020.	Pierard D, Hermsen ED, Kantecki M, Arhin FF.	Antibiotics (Basel)	10.3390/antibiotics12111591	2023
	Prevalence and Molecular Characterization of Extended-Spectrum beta-Lactamase Producing Enterobacterales in Healthy Community Dogs in Israel.	Shnaiderman-Torban A, Navon-Venezia S, Baron H, Abu-Ahmad W, Arielly H, Zizelski Valenci G, Nissan I, Paitan Y, Steinman A.	Antibiotics (Basel)	10.3390/antibiotics11081069	2022
	DISEASE AND PATHOLOGICAL CONDITIONS OF AN ENDANGERED RODENT, MICROTUS CALIFORNICUS SCIRPENSIS, IN A CAPTIVE-REARING FACILITY AND IN THE WILD.	Foley J, Allan N, Pesapane R, Johnson A, Woods L, Brignolo L, Luce A, Clifford DL, Imai DM.	J Zoo Wildl Med	10.1638/2018-0117	2020
	Antimicrobial resistance profiles of Escherichia coli and prevalence of extended-spectrum beta-lactamase-producing Enterobacteriaceae in calves from organic and conventional dairy farms in Switzerland.	Nuesch-Inderbinen M, Hanni C, Zurfluh K, Hartnack S, Stephan R.	Microbiologyopen	10.1002/mbo3.1269	2022
	Species-Specific Effects of Planktonic Bacteria on the Predator-Induced Life-History Defense of Daphnia: Based on Hierarchical Cluster Analysis and Structural Equation Model.	Liu Q, Ding Z, Gu L, Sun Y, Zhang L, Yang Z.	Appl Environ Microbiol	10.1128/aem.01432-22	2022
Pathogenicity	Isolation of an IncP-1 plasmid harbouring mcr-1 from a chicken isolate of Citrobacter braakii in China.	Liu J, Yang Y, Li Y, Liu D, Tuo H, Wang H, Call DR, Davis M, Zhang A.	Int J Antimicrob Agents	10.1016/j.ijantimicag.2017.12.030	2018
	Mining Arylsulfatase from Genome-Scale Metabolic Pathways of Pseudoalteromonas sp. SR43-6 and Its Agar-Based Desulfurization Applications.	Li S, Guo Y, Jiang H, Zhang H, Li J, Chen Y, Li J, Mao X, Wang M.	ACS Omega	10.1021/acsomega.5c01356	2025
	Modulation of Kex2p Cleavage Site for In Vitro Processing of Recombinant Proteins Produced by Saccharomyces cerevisiae.	Kim MJ, Park SL, Kim SH, Park HJ, Sung BH, Sohn JH, Bae JH.	J Microbiol Biotechnol	10.4014/jmb.2306.06024	2023
	Fungal Viridionychia: Onychomycosis-Induced Chloronychia Caused by Candida parapsilosis-Associated Green Nail Discoloration.	Forouzan P, Cohen PR.	Cureus	10.7759/cureus.20335	2021
	Massive Spread of OXA-48 Carbapenemase-Producing Enterobacteriaceae in the Environment of a Swiss Companion Animal Clinic.	Schmitt K, Biggel M, Stephan R, Willi B.	Antibiotics (Basel)	10.3390/antibiotics11020213	2022
Enzymology	Citrobacter braakii Bacteremia: Case Report and Review of the Literature.	Oyeka M, Antony S.	Infect Disord Drug Targets	10.2174/1871526516666161005155847	2017
	Looking for ESKAPE Bacteria: Occurrence and Phenotypic Antimicrobial Resistance Profiles in Wild Birds from Northern and Central Italy Sites.	Grilli G, Rapi MC, Musa L, Di Giacinto G, Passamonti F, Raimondi S, Cianca O, Franciosini MP.	Antibiotics (Basel)	10.3390/antibiotics14101025	2025
	Biocide Tolerance and Impact of Sanitizer Concentrations on the Antibiotic Resistance of Bacteria Originating from Cheese.	Gyorgy E, Unguran KA, Laslo E.	Foods	10.3390/foods12213937	2023
	Genotypic Distribution and Antimicrobial Susceptibilities of Carbapenemase-Producing Enterobacteriaceae Isolated From Rectal and Clinical Samples in Korean University Hospitals Between 2016 and 2019.	Jeong S, Lee N, Park MJ, Jeon K, Kim HS, Kim HS, Kim JS, Song W.	Ann Lab Med	10.3343/alm.2022.42.1.36	2022
	Evaluation of multidrug resistance in the Gram-negative microbiome of cancer patients and the adverse effects of their metabolites on albino rats and epithelial or fibroblasts cell lines.	El-Gendy MMAA, Alghamdi HA, Abdel-Wahhab KG, Hassan NS, El-Bondkly AAM, Abdel-Wahab M, Farghaly AA, El-Bondkly AMA.	Infect Agent Cancer	10.1186/s13027-024-00634-y	2025
	Seminal Bacterioflora of Two Rooster Lines: Characterization, Antibiotic Resistance Patterns and Possible Impact on Semen Quality.	Tvrda E, Petrovicova M, Benko F, Duracka M, Kovac J, Slanina T, Galovicova L, Ziarovska J, Kacaniova M.	Antibiotics (Basel)	10.3390/antibiotics12020336	2023
	Isolation and Characterization of Colistin-Resistant Enterobacteriaceae from Foods in Two Italian Regions in the South of Italy.	Fraccalvieri R, Bianco A, Difato LM, Capozzi L, Del Sambro L, Castellana S, Donatiello A, Serrecchia L, Pace L, Farina D, Galante D, Caruso M, Tempesta M, Parisi A.	Microorganisms	10.3390/microorganisms13010163	2025
Genetics	Microbial and Metabolic Gut Profiling across Seven Malignancies Identifies Fecal Faecalibacillus intestinalis and Formic Acid as Commonly Altered in Cancer Patients.	Kulecka M, Czarnowski P, Balabas A, Turkot M, Kruczkowska-Tarantowicz K, Zeber-Lubecka N, Dabrowska M, Paszkiewicz-Kozik E, Walewski J, Lugowska I, Kosela-Paterczyk H, Rutkowski P, Kluska A, Piatkowska M, Jagiello-Gruszfeld A, Tenderenda M, Gawinski C, Wyrwicz L, Borucka M, Krzakowski M, Zajac L, Kaminski M, Mikula M, Ostrowski J.	Int J Mol Sci	10.3390/ijms25158026	2024
	Dissemination of Carbapenemases and MCR-1 Producing Gram-Negative Bacteria in Aquatic Environments in Batna, Algeria.	Cherak Z, Loucif L, Bendjama E, Moussi A, Benbouza A, Grainat N, Rolain JM.	Antibiotics (Basel)	10.3390/antibiotics11101314	2022
	The Prevalence of Multidrug-Resistant Enterobacteriaceae among Neonates in Kuwait.	Alajmi RZ, Alfouzan WA, Mustafa AS.	Diagnostics (Basel)	10.3390/diagnostics13081505	2023
	Efficacy and phosphorus equivalency values of two bacterial phytases (Escherichia coli and Citrobacter braakii) allow the partial reduction of dicalcium phosphate added to the diets of broiler chickens from 1 to 21days of age	Ribeiro V, Salguero SC, Gomes G, Barros VRSM, Silva DL, Barreto SLT, Rostagno HS, Hannas MI, Albino LFT.	Anim Feed Sci Technol	10.1016/j.anifeedsci.2016.09.008	2016
	Occurrence of Extended Spectrum Cephalosporin-, Carbapenem- and Colistin-Resistant Gram-Negative Bacteria in Fresh Vegetables, an Increasing Human Health Concern in Algeria.	Chelaghma W, Loucif L, Bendjama E, Cherak Z, Bendahou M, Rolain JM.	Antibiotics (Basel)	10.3390/antibiotics11080988	2022
Genetics	First documentation of a clinical multidrug-resistant Enterobacter chuandaensis ST2493 isolate co-harboring bla_NDM-1 and two bla_KPC-2 bearing plasmids.	Chen R, Li C, Xu H, Liu R, Ge H, Qiao J, Liu Y, Liu X, Fang L, Shen Y, Guo X.	Sci Rep	10.1038/s41598-024-78163-2	2024
	Effect of Raw Chickpea in the Broiler Chicken Diet on Intestinal Histomorphology and Intestinal Microbial Populations.	Danek-Majewska A, Kwiecien M, Samolinska W, Kowalczyk-Pecka D, Nowakowicz-Debek B, Winiarska-Mieczan A.	Animals (Basel)	10.3390/ani12141767	2022
Genetics	Isolation, Molecular Characterization, and Antimicrobial Resistance of Selected Culturable Bacteria From Crayfish (Procambarus clarkii).	Huang Z, Li Y, Cai C, Dong N.	Front Microbiol	10.3389/fmicb.2022.911777	2022
	The Impact of Chlorine Disinfection of Hospital Wastewater on Clonal Similarity and ESBL-Production in Selected Bacteria of the Family Enterobacteriaceae.	Rolbiecki D, Korzeniewska E, Czatzkowska M, Harnisz M.	Int J Environ Res Public Health	10.3390/ijerph192113868	2022
Enzymology	Evaluation of presumptive identification of Enterobacterales using CHROMagar Orientation medium and rapid biochemical tests.	Ohtaki H, Takahashi A, Niwa A, Yonetamari J, Nakayama A, Kuchibiro T, Ohta H, Ito H, Baba H, Murakami N, Ohkusu K.	J Clin Lab Anal	10.1002/jcla.23453	2020
	Enhanced wound healing activity of PEG/PCL copolymer combined with bioactive nanoparticles in wound care after anorectal surgery: Via bio-inspired methodology.	Wang F, Xu Y, Lv C, Han C, Li Y.	J Photochem Photobiol B	10.1016/j.jphotobiol.2018.07.018	2018
	Prevalence and Antimicrobial Susceptibility of Bacterial Pathogens in Ready-to-Eat Foods Retailed in Osaka Prefecture, Japan.	Harada T, Taguchi M, Kawahara R, Kanki M, Kawatsu K.	J Food Prot	10.4315/0362-028x.jfp-18-035	2018
Pathogenicity	Novel Techniques to Unravel Causative Bacterial Ecological Shifts in Chronic Urinary Tract Infection.	Chieng CCY, Kong Q, Liou NSY, Neira Rey M, Dalby KL, Jones N, Khasriya R, Horsley H.	Pathogens	10.3390/pathogens14030299	2025
Phylogeny	Bacteremia due to Citrobacter braakii: A case report and literature review.	Hirai J, Uechi K, Hagihara M, Sakanashi D, Kinjo T, Haranaga S, Fujita J.	J Infect Chemother	10.1016/j.jiac.2016.07.003	2016
	Bacterial load assessment and multi-drug resistant Bacteria isolation from Fuchka in Mymensingh City, Bangladesh.	Prapti BBR, Ahmmed MT, Proma NG, Aunu DZ, Shampa SI, Rahman A, Islam MS, Siddique MP.	One Health	10.1016/j.onehlt.2025.101170	2025
	Methods of Cleaning Taps to Prevent Hospital-Associated Infections: An Environmental Survey-Based Study.	Hashimoto M, Asai S, Umezawa K, Tanitsu R, Miyazawa M, Kobayashi M, Kawakami Y, Sekine Y, Suzuki Y, Miyachi H, Okami K.	Infect Dis Rep	10.3390/idr15010015	2023
Phylogeny	Putative genome contamination has minimal impact on the GTDB taxonomy.	Mussig AJ, Chaumeil PA, Chuvochina M, Rinke C, Parks DH, Hugenholtz P.	Microb Genom	10.1099/mgen.0.001256	2024
	Digital PCR assay for the specific detection and estimation of Salmonella contamination levels in poultry rinse.	Velez FJ, Kandula N, Blech-Hermoni Y, Jackson CR, Bosilevac JM, Singh P.	Curr Res Food Sci	10.1016/j.crfs.2024.100807	2024
Enzymology	Extended-spectrum beta-lactamase-producing Enterobacteriaceae from animal origin and wastewater in Tunisia: first detection of O25b-B2₃-CTX-M-27-ST131 Escherichia coli and CTX-M-15/OXA-204-producing Citrobacter freundii from wastewater.	Sghaier S, Abbassi MS, Pascual A, Serrano L, Diaz-De-Alba P, Said MB, Hassen B, Ibrahim C, Hassen A, Lopez-Cerero L.	J Glob Antimicrob Resist	10.1016/j.jgar.2019.01.002	2019
	Novel IncR/IncP6 Hybrid Plasmid pCRE3-KPC Recovered from a Clinical KPC-2-Producing Citrobacter braakii Isolate.	Dong D, Mi Z, Li D, Gao M, Jia N, Li M, Tong Y, Zhang X, Zhu Y.	mSphere	10.1128/msphere.00891-19	2020
	Genomic characterization revealing the high rate of tet(X4)-positive Escherichia coli in animals associated with successful genetic elements.	Shao L, Wu C, Li C, He R, Chen G, Sun D, Yang Y, Feng Y, Zhang G, Yan B, Dai M, Tian GB, Zhong LL.	Front Microbiol	10.3389/fmicb.2024.1423352	2024
	Investigating the antimicrobial activity of essential oils against pathogens isolated from sewage sludge of southern Lebanese villages.	Mezher M, Hajj RE, Khalil M.	Germs	10.18683/germs.2022.1355	2022
Genetics	Metagenomic Insights into the Taxonomic and Functional Features of Traditional Fermented Milk Products from Russia.	Elcheninov AG, Zayulina KS, Klyukina AA, Kremneva MK, Kublanov IV, Kochetkova TV.	Microorganisms	10.3390/microorganisms12010016	2023
	Fever and prodromal infections in anti-glomerular basement membrane disease.	Gu QH, Xie LJ, Jia XY, Ma R, Liao YH, Cui Z, Zhao MH.	Nephrology (Carlton)	10.1111/nep.13040	2018
	Dissemination of Carbapenemases (OXA-48, NDM and VIM) Producing Enterobacteriaceae Isolated from the Mohamed VI University Hospital in Marrakech, Morocco.	Loqman S, Soraa N, Diene SM, Rolain JM.	Antibiotics (Basel)	10.3390/antibiotics10050492	2021
	Carbapenem alternatives for treatment of bloodstream infections due to AmpC producing enterobacterales.	Avila-Nunez M, Lima O, Sousa A, Represa M, Rubinan P, Celestino P, Garrido-Ventin M, Garcia-Formoso L, Vasallo-Vidal F, Martinez-Lamas L, Perez-Landeiro A, Rubianes M, Perez-Rodriguez MT.	Ann Clin Microbiol Antimicrob	10.1186/s12941-023-00624-9	2023
	Evaluation of a simple method for testing aztreonam and ceftazidime-avibactam synergy in New Delhi metallo-beta-lactamase producing Enterobacterales.	Khan S, Das A, Vashisth D, Mishra A, Vidyarthi AJ, Gupta R, Begam NN, Kataria B, Bhatnagar S.	PLoS One	10.1371/journal.pone.0303753	2024
	Parasites and microorganisms associated with the snakes collected for the "festa Dei serpari" in Cocullo, Italy.	Mendoza-Roldan JA, Perles L, Filippi E, Szafranski N, Montinaro G, Carbonara M, Scalera R, de Abreu Teles PP, Walochnik J, Otranto D.	PLoS Negl Trop Dis	10.1371/journal.pntd.0011973	2024
	Evaluation of the Autof MS1000 mass spectrometer in the identification of clinical isolates.	Ma Q, Zhang Q, Yuan Y, Yan W, Wang S, Xu J, Zhang J, Wang Y, Li Y.	BMC Microbiol	10.1186/s12866-020-02005-0	2020
Metabolism	The efficacy of 2 phytases on inositol phosphate degradation in different segments of the gastrointestinal tract, calcium and phosphorus digestibility, and bone quality of broilers.	Bello A, Dersjant-Li Y, Korver DR.	Poult Sci	10.3382/ps/pez375	2019
	Periungual Abscess Caused by Citrobacter braakii in a Patient with Chronic Paronychia.	Bae SH, Kim SJ.	Ann Dermatol	10.5021/ad.2016.28.4.528	2016
	Green Nail Syndrome Treated with Ozenoxacin: Two Case Reports.	Cosio T, Petruccelli R, Gaziano R, Fontana C, Favaro M, Zampini P, Pistoia ES, Diluvio L, Lozzi F, Bianchi L, Campione E.	Case Rep Dermatol	10.1159/000533923	2023
Pathogenicity	Molecular characterization of multidrug resistant Enterobacterales strains isolated from liver and kidney transplant recipients in Spain.	Fernandez-Martinez M, Gonzalez-Rico C, Gozalo-Marguello M, Marco F, Gracia-Ahufinger I, Aranzamendi M, Sanchez-Diaz AM, Vicente-Rangel T, Chaves F, Calvo Montes J, Martinez-Martinez L, Farinas MC, ENTHERE Study Group, the Group for Study of Infection in Transplantation of the Spanish Society of Infectious Diseases and Clinical Microbiology (GESITRA-SEIMC) and the Spanish Network for Research in Infectious Diseases (REIPI).	Sci Rep	10.1038/s41598-021-90382-5	2021
	Hospital sewage water: a reservoir for variants of New Delhi metallo-beta-lactamase (NDM)- and extended-spectrum beta-lactamase (ESBL)-producing Enterobacteriaceae.	Parvez S, Khan AU.	Int J Antimicrob Agents	10.1016/j.ijantimicag.2017.08.032	2018
	Evaluation of a Tetracycline-Resistant E. coli Enumeration Method for Correctly Classifying E. coli in Environmental Waters in Kentucky, USA.	Boggs C, Shiferawe K, Karsten E, Hamlet J, Altheide ST, Marion JW.	Pathogens	10.3390/pathogens12091090	2023
Enzymology	Carbapenem-resistant Citrobacter spp. isolated in Spain from 2013 to 2015 produced a variety of carbapenemases including VIM-1, OXA-48, KPC-2, NDM-1 and VIM-2.	Arana DM, Ortega A, Gonzalez-Barbera E, Lara N, Bautista V, Gomez-Ruiz D, Saez D, Fernandez-Romero S, Aracil B, Perez-Vazquez M, Campos J, Oteo J, Spanish Antibiotic Resistance Surveillance Programme Collaborating Group.	J Antimicrob Chemother	10.1093/jac/dkx325	2017
	Skilled nursing facility wastewater surveillance: a SARS-CoV-2 and antimicrobial resistance detection pilot study.	Santiago AJ, Burgos Garay M, Campbell M, Cahela Y, Donlan R, Gable P, Ganim Kyros C, Franco L, Kartforosh L, Lenz S, Lyons AK, Moore J, Noble-Wang J, Sanders C, Abera B, Adler CH, Jones S, Medrzycki M, Walters MS, Cook P, Li Y, Tao Y, Zhang J, Malapati L, Retchless A, Tong S, Coulliette-Salmond AD.	J Water Health	10.2166/wh.2025.374	2025
	Tuberculosis in an Allogeneic Transplant Kidney: A Rare Case Report and Review of Literature.	Sasi S, Varghese MK, Nair AP, Hashim S, Al Maslamani M.	Cureus	10.7759/cureus.11661	2020
Enzymology	Engineering of the Phytase YiAPPA to Improve Thermostability and Activity and Its Application Potential in Dephytinization of Food Ingredients.	Zeng J, Guo J, Yuan L.	J Microbiol Biotechnol	10.4014/jmb.2403.03031	2024
Metabolism	Characterization of OXA-48-like-producing Enterobacteriaceae isolated from river water in Algeria.	Tafoukt R, Touati A, Leangapichart T, Bakour S, Rolain JM.	Water Res	10.1016/j.watres.2017.04.073	2017
Phylogeny	The species accuracy of the Most Probable Number (MPN) European Union reference method for enumeration of Escherichia coli in marine bivalves.	Grevskott DH, Svanevik CS, Wester AL, Lunestad BT.	J Microbiol Methods	10.1016/j.mimet.2016.10.006	2016
	Epidemiology and antimicrobial resistance trends of pathogens causing urinary tract infections in Mwanza, Tanzania: A comparative study during and after the implementation of the National Action Plan on Antimicrobial Resistance (2017-2022).	Silago V, Oravcova K, Matthews L, Mshana SE, Claus H, Seni J.	Int J Infect Dis	10.1016/j.ijid.2024.107208	2024
	A New Rapid and Quantitative Assay to Determine the Phytase Activity of Feed.	Willard ECD, Sundquist A, Glitsoe V, Sorbara JO, Tamez-Hidalgo P, Heine C, Ricker T, Lehmann M, Bergman A, Etheve S, Chatelle CV.	ACS Omega	10.1021/acsomega.1c05917	2022
	Microbial community structure of plant-based meat alternatives.	Roch FF, Dzieciol M, Quijada NM, Alteio LV, Mester PJ, Selberherr E.	NPJ Sci Food	10.1038/s41538-024-00269-8	2024
	The Role of the Plant-Soil Relationship in Agricultural Production-With Particular Regard to PGPB Application and Phytoremediation.	Kisvarga S, Hamar-Farkas D, Ordogh M, Horotan K, Nemenyi A, Kovacs D, Orloci L.	Microorganisms	10.3390/microorganisms11061616	2023
	Exploring microbial diversity and biosynthetic potential in zoo and wildlife animal microbiomes.	Schmartz GP, Rehner J, Schuff MJ, Molano LG, Becker SL, Krawczyk M, Tagirdzhanov A, Gurevich A, Francke R, Muller R, Keller V, Keller A.	Nat Commun	10.1038/s41467-024-52669-9	2024
	Pathogen resistance and gene frequency stability of major histocompatibility complex class IIB alleles in the giant spiny frog Quasipaa spinosa	Hu W, Dong B, Kong S, Mao Y, Zheng R.	Aquaculture	10.1016/j.aquaculture.2016.11.001	2017
Genetics	Monocentric observational cohort study to investigate the transmission of third-generation cephalosporin-resistant Enterobacterales in a neonatal intensive care unit in Heidelberg, Germany.	Nurjadi D, Eichel VM, Poschl J, Gille C, Kranig S, Heeg K, Boutin S.	Microbiol Spectr	10.1128/spectrum.02038-23	2023
	A head-to-head comparison of three MALDI-TOF mass spectrometry systems with 16S rRNA gene sequencing.	Dichtl K, Klugherz I, Greimel H, Luxner J, Koberl J, Friedl S, Steinmetz I, Leitner E.	J Clin Microbiol	10.1128/jcm.01913-22	2023
Metabolism	Efficient hydroxylation of 1,8-cineole with monoterpenoid-resistant recombinant Pseudomonas putida GS1.	Mi J, Schewe H, Buchhaupt M, Holtmann D, Schrader J.	World J Microbiol Biotechnol	10.1007/s11274-016-2071-y	2016
	Clinical application of amplification-based versus amplification-free metagenomic next-generation sequencing test in infectious diseases.	Wang ZY, Li LL, Cao XL, Li P, Du J, Zou MJ, Wang LL.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1138174	2023
Genetics	Occurrence and Characterisation of Colistin-Resistant Escherichia coli in Raw Meat in Southern Italy in 2018-2020.	Nobili G, La Bella G, Basanisi MG, Damato AM, Coppola R, Migliorelli R, Rondinone V, Leekitcharoenphon P, Bortolaia V, La Salandra G.	Microorganisms	10.3390/microorganisms10091805	2022
Genetics	The transmission risk of multidrug-resistant organisms between hospital patients and their pets - a case-control study, Germany, 2019 to 2022.	Hackmann C, Genath A, Gruhl D, Weber A, Maechler F, Kola A, Schwab F, Schwarz S, Lubke-Becker A, Schneider T, Gastmeier P, Leistner R.	Euro Surveill	10.2807/1560-7917.es.2024.29.39.2300714	2024
Genetics	Comprehensive Genomic Investigation of Tigecycline Resistance Gene tet(X4)-Bearing Strains Expanding among Different Settings.	Li R, Li Y, Peng K, Yin Y, Liu Y, He T, Bai L, Wang Z.	Microbiol Spectr	10.1128/spectrum.01633-21	2021
	Characterization of Gram-negative Bloodstream Infections in Hospitalized Australian Children and Their Clinical Outcomes.	Wen SCH, Harris PNA, Forde B, Permana B, Chatfield MD, Lau CL, Spurling G, Bauer MJ, Balch R, Chambers H, Schlapbach LJ, Clark JE, Dougherty S, Blyth CC, Britton PN, Clifford V, Haeusler GM, McMullan B, Wadia U, Paterson DL, Irwin AD.	Clin Infect Dis	10.1093/cid/ciae341	2024
	High Carriage Rate of the Multiple Resistant Plasmids Harboring Quinolone Resistance Genes in Enterobacter spp. Isolated from Healthy Individuals.	Long Y, Lu X, Ni X, Liu J, Wang M, Li X, Li Z, Zhou H, Li Z, Wu K, Wang W, Yang L, Xu J, Chen H, Kan B.	Antibiotics (Basel)	10.3390/antibiotics11010015	2021
Enzymology	Citrobacter braakii bacteremia-induced septic shock after colonoscopy preparation with polyethylene glycol in a critically ill patient: a case report.	Yumoto T, Kono Y, Kawano S, Kamoi C, Iida A, Nose M, Sato K, Ugawa T, Okada H, Ujike Y, Nakao A.	Ann Clin Microbiol Antimicrob	10.1186/s12941-017-0201-5	2017
Metabolism	Evaluation of a new generation phytase on phytate phosphorus release for egg production and tibia strength in hens fed a corn-soybean meal diet.	Fernandez SR, Charraga S, Avila-Gonzalez E.	Poult Sci	10.3382/ps/pey558	2019
	Complete Genome Sequences of Citrobacter braakii Strains GTA-CB01 and GTA-CB04, Isolated from Ground Beef.	Basra P, Koziol A, Wong A, Carrillo CD.	Genome Announc	10.1128/genomea.01307-14	2015
	Contribution of potassium solubilizing bacteria in improved potassium assimilation and cytosolic K⁺/Na⁺ ratio in rice (Oryza sativa L.) under saline-sodic conditions.	Nawaz A, Qamar ZU, Marghoob MU, Imtiaz M, Imran A, Mubeen F.	Front Microbiol	10.3389/fmicb.2023.1196024	2023
	Characterization of the Complete Nucleotide Sequences of mcr-1-Encoding Plasmids From Enterobacterales Isolates in Retailed Raw Meat Products From the Czech Republic.	Zelendova M, Papagiannitsis CC, Valcek A, Medvecky M, Bitar I, Hrabak J, Gelbicova T, Barakova A, Kutilova I, Karpiskova R, Dolejska M.	Front Microbiol	10.3389/fmicb.2020.604067	2020
	Global Spread of MCR-Producing Salmonella enterica Isolates.	Zhang Z, Tian X, Shi C.	Antibiotics (Basel)	10.3390/antibiotics11080998	2022
	Plasmid-Mediated Spread of Carbapenem Resistance in Enterobacterales: A Three-Year Genome-Based Survey.	Yao Y, Imirzalioglu C, Falgenhauer L, Falgenhauer J, Heinmuller P, SurvCARE Hesse Working Group, Domann E, Chakraborty T.	Antibiotics (Basel)	10.3390/antibiotics13080682	2024
Metabolism	Multiwavelength Resonance Raman Characterization of the Effect of Growth Phase and Culture Medium on Bacteria.	Kunapareddy N, Grun J, Lunsford R, Nikitin S, Wang Z, Gillis D.	Appl Spectrosc	10.1366/14-07770	2015
	Short-Term Storage of Rooster Ejaculates: Sperm Quality and Bacterial Profile Differences in Selected Commercial Extenders.	Tvrda E, Petrovicova M, Duracka M, Benko F, Slanina T, Galovicova L, Kacaniova M.	Antibiotics (Basel)	10.3390/antibiotics12081284	2023
	Anthropogenic chemicals and their impacts on microbes living in buildings.	Hu J, Hartmann EM.	Microb Biotechnol	10.1111/1751-7915.13676	2021
Biotechnology	Investigating processing practices and microbiological quality of minimally processed vegetables in Brazil.	de Aragao Freire Ferreira Finger J, de Almeida Silva G, Bernardino MC, Andrade DKA, Maffei DF, Pinto UM.	Braz J Microbiol	10.1007/s42770-024-01275-4	2024
	Diversity of microbiota in Slovak summer ewes' cheese "Bryndza".	Kacaniova M, Terentjeva M, Kunova S, Hascik P, Kowalczewski PL, Stefanikova J.	Open Life Sci	10.1515/biol-2021-0038	2021
	Enterobacter asburiae E7, a Novel Potential Probiotic, Enhances Resistance to Aeromonas veronii Infection via Stimulating the Immune Response in Common Carp (Cyprinus carpio).	Li J, Zhang Z, Wu ZB, Qu SY, Wang GX, Wei DD, Li PF, Ling F.	Microbiol Spectr	10.1128/spectrum.04273-22	2023
	Colistin resistance plasmids dually enhance bacterial virulence and antibiotic resistance via surface polysaccharide biosynthesis.	Ahn E, Kim J, Jiang J, Kim J, Muszynski A, Kasperkiewicz K, Shin H, Cao Y, Soh Y, Park Y, Heiss C, Fernando LDP, Azadi P, Wang Y, Jeon B, Ryu S.	Nat Commun	10.1038/s41467-025-65412-9	2025
	Complete-genome sequencing and comparative genomic characterization of bla_NDM-5 carrying Citrobacter freundii isolates from a patient with multiple infections.	Ye J, Jin L, Li Y, Xu H, Lin Y, Zhou T, Zheng B, Wang M, Wang Z.	BMC Genomics	10.1186/s12864-023-09579-9	2023
	Treatment of life-threatening acute osteomyelitis of the jaw during chemotherapy: a case report.	Jung J, Kim S, Park JS, Lee CR, Jeon JH, Kwon IJ, Myoung H.	J Dent Anesth Pain Med	10.17245/jdapm.2020.20.4.251	2020
	Whole-Genomic Analysis of NDM-5-Producing Enterobacteriaceae Recovered from an Urban River in China.	Li Y, Tang M, Dai X, Zhou Y, Zhang Z, Qiu Y, Li C, Zhang L.	Infect Drug Resist	10.2147/idr.s330787	2021
	CyuR is a dual regulator for L-cysteine dependent antimicrobial resistance in Escherichia coli.	Rodionova IA, Lim HG, Gao Y, Rodionov DA, Hutchison Y, Szubin R, Dalldorf C, Monk J, Palsson BO.	Commun Biol	10.1038/s42003-024-06831-0	2024
	A cross-sectional study on occupational exposure to microorganisms, endotoxin, hydrogen sulfide, and dust during work at drilling waste treatment plants.	Daae HL, Graff P, Foss OAH, Kofoed VC, Afanou AK, Frederiksen MW, Madsen AM.	Ann Work Expo Health	10.1093/annweh/wxad069	2024
	Evaluation of the QMAC-dRAST System Version 2.5 for Rapid Antimicrobial Susceptibility Testing of Gram-Negative Bacteria From Positive Blood Culture Broth and Subcultured Colony Isolates.	Kim TY, Kang M, Shim HJ, Kang OK, Huh HJ, Lee NY.	J Clin Lab Anal	10.1002/jcla.25043	2024
Metabolism	Performance of microbial phytases for gastric inositol phosphate degradation.	Nielsen AV, Nyffenegger C, Meyer AS.	J Agric Food Chem	10.1021/jf5050469	2015
	A Novel Transposon Tn7709 Harbors Multidrug Resistance Genes in a Pathogenic Aeromonas media Strain QST31.	Shang B, Li X, Zhang X, Zhang M, Kong J, Wang J, Tan A, Zhao F, Zhang D.	Microorganisms	10.3390/microorganisms12030572	2024
	Analysis of Cultured Gut Microbiota Using MALDI-TOF MS in COVID-19 Patients from Serbia during the Predominance of the SARS-CoV-2 Omicron Variant.	Patic A, Kovacevic G, Vukovic V, Hrnjakovic Cvjetkovic I, Ristic M, Milosavljevic B, Medic D, Djilas M, Radovanov J, Kovacevic A, Pustahija T, Balac D, Petrovic V.	Microorganisms	10.3390/microorganisms12091800	2024
Metabolism	Increasing doses of phytase from Citrobacter braakii in diets with reduced inorganic phosphorus and calcium improve growth performance and lean meat of growing and finishing pigs.	da Silva CA, Callegari MA, Dias CP, Bridi AM, Pierozan CR, Foppa L, Martins CCDS, Dias FTF, Passos A, Hermes R.	PLoS One	10.1371/journal.pone.0217490	2019
	Metastatic insidious super giant basal cell carcinoma.	Ahmed M, Muradashvili T, Soliman S, Ghaly M.	BMJ Case Rep	10.1136/bcr-2022-249873	2022
Metabolism	In vitro and in vivo degradation of myo-inositol hexakisphosphate by a phytase from Citrobacter braakii.	Pontoppidan K, Glitsoe V, Guggenbuhl P, Quintana AP, Nunes CS, Pettersson D, Sandberg AS.	Arch Anim Nutr	10.1080/1745039x.2012.735082	2012
Enzymology	Identification and inhibition of histamine-forming bacteria in blue scad (Decapterus maruadsi) and chub mackerel (Scomber japonicus).	Hu JW, Cao MJ, Guo SC, Zhang LJ, Su WJ, Liu GM.	J Food Prot	10.4315/0362-028x.jfp-14-296	2015
Enzymology	Aerobic bacterial microbiota isolated from the cloaca of the European pond turtle (Emys orbicularis) in Poland.	Nowakiewicz A, Ziolkowska G, Zieba P, Dziedzic BM, Gnat S, Wojcik M, Dziedzic R, Kostruba A.	J Wildl Dis	10.7589/2013-07-157	2015
	Isolation and Characterization of Potassium-Solubilizing Rhizobacteria (KSR) Promoting Cotton Growth in Saline-Sodic Regions.	Zhao Y, Liang H, Zhang J, Chen Y, Dhital YP, Zhao T, Wang Z.	Microorganisms	10.3390/microorganisms12071474	2024
	In Vitro Activity of Two Novel Antimicrobial Compounds on MDR-Resistant Clinical Isolates.	Rima M, Pfennigwerth N, Cremanns M, Cirnski K, Oueslati S, Gatermann SG, d'Amelio N, Herrmann J, Muller R, Naas T.	Antibiotics (Basel)	10.3390/antibiotics12081265	2023
Enzymology	Characterization of Beta-lactamases in Faecal Enterobacteriaceae Recovered from Healthy Humans in Spain: Focusing on AmpC Polymorphisms.	Porres-Osante N, Saenz Y, Somalo S, Torres C.	Microb Ecol	10.1007/s00248-014-0544-9	2015
	In vitro activity of cefiderocol against European Enterobacterales, including isolates resistant to meropenem and recentbeta-lactam/beta-lactamase inhibitor combinations.	Santerre Henriksen A, Arena F, Attwood M, Canton R, Gatermann S, Naas T, Morrissey I, Longshaw C, ARTEMIS Study Investigators.	Microbiol Spectr	10.1128/spectrum.04181-23	2024
	Bowel preparation agent inducing profound shock precolonoscopy.	Loraine A.	BMJ Case Rep	10.1136/bcr-2019-233406	2020
	Multi-Drug Resistance to Salmonella spp. When Isolated from Raw Meat Products.	Plawinska-Czarnak J, Wodz K, Kizerwetter-Swida M, Bogdan J, Kwiecinski P, Nowak T, Strzalkowska Z, Anusz K.	Antibiotics (Basel)	10.3390/antibiotics11070876	2022
Metabolism	The interplay of dietary nutrient specification and varying calcium to total phosphorus ratio on efficacy of a bacterial phytase: 1. Growth performance and tibia mineralization.	Olukosi OA, Fru-Nji F.	Poult Sci	10.3382/ps.2014-03978	2014
	Antimicrobial resistance in wildlife and in the built environment in a wildlife rehabilitation center.	Baros Jorquera C, Moreno-Switt AI, Sallaberry-Pincheira N, Munita JM, Flores Navarro C, Tardone R, Gonzalez-Rocha G, Singer RS, Bueno I.	One Health	10.1016/j.onehlt.2021.100298	2021
	Microbiota Assessment of Pediatric Simple and Complex Acute Appendicitis.	Kakar M, Reinis A, Kroica J, Engelis A, Broks R, Asare L, Vermeulen M, Senica SO, Saxena A, Petersons A.	Medicina (Kaunas)	10.3390/medicina58091144	2022
Biotechnology	Soleris®Enterobacteriaceae for the Detection of Enterobacteriaceae in Select Foods: AOAC Performance Tested MethodSM 121901.	Alles S, Roman B, Betts G, Jordan S, Everis L, Montei C, Biswas P, Mozola M, Donofrio R.	J AOAC Int	10.1093/jaoacint/qsaa001	2020
	Supplementation of a wheat-based diet low in phosphorus with microbial 6-phytase expressed in Aspergillus oryzae increases digestibility and plasma phosphorus but not performance in lactating sows	Nasir Z, Broz J, Zijlstra RT.	Anim Feed Sci Technol	10.1016/j.anifeedsci.2014.10.008	2014
	Comparative genomic analysis of Citrobacter sp. XT1-2-2 reveals insights into the molecular mechanism of microbial immobilization of heavy metals.	Shan S, Cheng W, Li Y, Zhang M, Liu Z, Wang Y, Wei X, Fu Z, Wu S, Du D, Guo Z.	BMC Genomics	10.1186/s12864-022-09069-4	2022
Metabolism	Selective oxidation of glycerol to 1,3-dihydroxyacetone by covalently immobilized glycerol dehydrogenases with higher stability and lower product inhibition.	Rocha-Martin J, Acosta A, Berenguer J, Berenguer J, Guisan JM, Lopez-Gallego F.	Bioresour Technol	10.1016/j.biortech.2014.07.116	2014
	Identification of Bacterial Profiles and Their Interactions with Selected Quality, Oxidative, and Immunological Parameters of Turkey Semen.	Lenicky M, Slanina T, Kacaniova M, Galovicova L, Petrovicova M, Duracka M, Benko F, Kovac J, Tvrda E.	Animals (Basel)	10.3390/ani11061771	2021
	Molecular Epidemiology of Global Carbapenemase-Producing Citrobacter spp. (2015-2017).	Nobrega D, Peirano G, Matsumura Y, Pitout JDD.	Microbiol Spectr	10.1128/spectrum.04144-22	2023
	Distribution of Antibiotic Resistance in a Mixed-Use Watershed and the Impact of Wastewater Treatment Plants on Antibiotic Resistance in Surface Water.	Cho S, Hiott LM, Read QD, Damashek J, Westrich J, Edwards M, Seim RF, Glinski DA, Bateman McDonald JM, Ottesen EA, Lipp EK, Henderson WM, Jackson CR, Frye JG.	Antibiotics (Basel)	10.3390/antibiotics12111586	2023
Metabolism	A single-day point-prevalence study of faecal carriers in long-term care hospitals in Madrid (Spain) depicts a complex clonal and polyclonal dissemination of carbapenemase-producing Enterobacteriaceae.	Ruiz-Garbajosa P, Hernandez-Garcia M, Beatobe L, Tato M, Mendez MI, Grandal M, Aranzabal L, Alonso S, Lopaz MA, Astray J, Canton R.	J Antimicrob Chemother	10.1093/jac/dkv355	2016
Pathogenicity	Ts2631 Endolysin from the Extremophilic Thermus scotoductus Bacteriophage vB_Tsc2631 as an Antimicrobial Agent against Gram-Negative Multidrug-Resistant Bacteria.	Plotka M, Kapusta M, Dorawa S, Kaczorowska AK, Kaczorowski T.	Viruses	10.3390/v11070657	2019
Enzymology	Occurrence and Transmission of bla_NDM-Carrying Enterobacteriaceae from Geese and the Surrounding Environment on a Commercial Goose Farm.	Cen DJ, Sun RY, Mai JL, Jiang YW, Wang D, Guo WY, Jiang Q, Zhang H, Zhang JF, Zhang RM, Sun J, Liao XP, Liu YH, Fang LX.	Appl Environ Microbiol	10.1128/aem.00087-21	2021
	Clinical characteristics and management of 106 patients with pyogenic liver abscess in a traditional Chinese hospital.	Nie S, Lin D, Li X.	Front Surg	10.3389/fsurg.2022.1041746	2022
	The effects of increasing dietary total Ca/total P ratios on growth performance, Ca and P balance, and bone mineralization in nursery pigs fed diets supplemented with phytase.	Zhai H, Bergstrom J, Zhang J, Dong W, Wang Z, Stamatopoulos K, Cowieson AJ.	Transl Anim Sci	10.1093/tas/txad006	2023
	Predominance of CTX-M-15 among ESBL Producers from Environment and Fish Gut from the Shores of Lake Victoria in Mwanza, Tanzania.	Moremi N, Manda EV, Falgenhauer L, Ghosh H, Imirzalioglu C, Matee M, Chakraborty T, Mshana SE.	Front Microbiol	10.3389/fmicb.2016.01862	2016
	Highly Sensitive and Specific Detection of Mobilized Colistin Resistance Gene mcr-1 by CRISPR-Based Platform.	Gong L, Jin Z, Liu E, Tang F, Yuan F, Liang J, Wang Y, Liu X, Wang Y.	Microbiol Spectr	10.1128/spectrum.01884-22	2022
	Expression of Staphylococcal Virulence Genes In Situ in Human Skin and Soft Tissue Infections.	Pulia MS, Anderson J, Ye Z, Elsayed NS, Le T, Patitucci J, Ganta K, Hall M, Singh VK, Shukla SK.	Antibiotics (Basel)	10.3390/antibiotics11040527	2022
	Synergistic Activity of Colistin in Combination With Resveratrol Against Colistin-Resistant Gram-Negative Pathogens.	Cannatelli A, Principato S, Colavecchio OL, Pallecchi L, Rossolini GM.	Front Microbiol	10.3389/fmicb.2018.01808	2018
Biotechnology	Shifts in surface microbiota after cleaning and disinfection in broiler processing plants: incomplete biofilm eradication revealed by robotic high-throughput screening.	Reiche T, Hageskal G, Mares M, Hoel S, Tondervik A, Heggeset TMB, Haugen T, Sperstad SB, Troen HH, Bjorkoy S, Jakobsen AN.	Appl Environ Microbiol	10.1128/aem.02401-24	2025
Metabolism	Effect of transgenic rhizobacteria overexpressing Citrobacter braakii appA on phytate-P availability to mung bean plants.	Patel KJ, Vig S, Naresh Kumar G, Archana G.	J Microbiol Biotechnol	10.4014/jmb.1006.06016	2010
Pathogenicity	In vitro and in vivo antimicrobial activity of propolis on the microbiota from gastrointestinal tract of chickens.	Kacaniova M, Rovna K, Arpasova H, Cubon J, Hleba L, Pochop J, Kunova S, Hascik P.	J Environ Sci Health A Tox Hazard Subst Environ Eng	10.1080/10934529.2012.687248	2012
	Effects of Microbial Phytase Supplementation on Egg Production and Egg Quality in Hy-line Brown Hens During the Late Laying Period.	Sun HY, Kim IH.	J Poult Sci	10.2141/jpsa.0200001	2021
	Clonal Dissemination of Aeromonas hydrophila With Binary Carriage of bla _KPC-2-Bearing Plasmids in a Chinese Hospital.	Xu Z, Shen W, Zhang R, Cai J.	Front Microbiol	10.3389/fmicb.2022.918561	2022
	Contribution of the Locus of Heat Resistance to Growth and Survival of Escherichia coli at Alkaline pH and at Alkaline pH in the Presence of Chlorine.	Zhu T, Wang Z, McMullen LM, Raivio T, Simpson DJ, Ganzle MG.	Microorganisms	10.3390/microorganisms9040701	2021
	Multicenter Clinical Evaluation of Vitek 2 Meropenem-Vaborbactam for Susceptibility Testing of Enterobacterales and Pseudomonas aeruginosa.	Dwivedi HP, Franklin S, Chandrasekaran S, Garner O, Traczewski MM, Beasley D, Procop GW, Tuohy M, Wilson D, Bala Y, Pincus DH.	J Clin Microbiol	10.1128/jcm.01610-21	2022
	Bioprospection of the bacterial beta-myrcene-biotransforming trait in the rhizosphere.	Soares-Castro P, Soares F, Reis F, Lino-Neto T, Santos PM.	Appl Microbiol Biotechnol	10.1007/s00253-023-12650-w	2023
Metabolism	Comparative effects of three phytases on the phosphorus and calcium use in the weaned piglet.	Guggenbuhl P, Wache Y, Simoes Nunes C, Fru F.	J Anim Sci	10.2527/jas.53891	2012
	Antimicrobial susceptibility and molecular epidemiology of extended-spectrum beta-lactamase-producing Enterobacteriaceae from intensive care units at Hamad Medical Corporation, Qatar.	Sid Ahmed MA, Bansal D, Acharya A, Elmi AA, Hamid JM, Sid Ahmed AM, Chandra P, Ibrahim E, Sultan AA, Doiphode S, Bilal NE, Deshmukh A.	Antimicrob Resist Infect Control	10.1186/s13756-016-0103-x	2016
Enzymology	Selection of DNA aptamers for capture and detection of Salmonella Typhimurium using a whole-cell SELEX approach in conjunction with cell sorting.	Dwivedi HP, Smiley RD, Jaykus LA.	Appl Microbiol Biotechnol	10.1007/s00253-013-4766-4	2013
	The Vaginal Community State Types Microbiome-Immune Network as Key Factor for Bacterial Vaginosis and Aerobic Vaginitis.	De Seta F, Campisciano G, Zanotta N, Ricci G, Comar M.	Front Microbiol	10.3389/fmicb.2019.02451	2019
	A Novel Cryptic Clostridial Peptide That Kills Bacteria by a Cell Membrane Permeabilization Mechanism.	Szadkowska M, Olewniczak M, Kloska A, Jankowska E, Kapusta M, Rybak B, Wyrzykowski D, Zmudzinska W, Gieldon A, Kocot A, Kaczorowska AK, Nierzwicki L, Makowska J, Kaczorowski T, Plotka M.	Microbiol Spectr	10.1128/spectrum.01657-22	2022
Metabolism	Cineole biodegradation: molecular cloning, expression and characterisation of (1R)-6beta-hydroxycineole dehydrogenase from Citrobacter braakii.	Slessor KE, Stok JE, Cavaignac SM, Hawkes DB, Ghasemi Y, De Voss JJ.	Bioorg Chem	10.1016/j.bioorg.2009.12.003	2010
	Purification, characterization, and gene cloning of glucose-1-phosphatase from Citrobacter braakii.	Kim YO, Kim HW, Park IS, Lee JH, Lee SJ, Kim KK.	J Gen Appl Microbiol	10.2323/jgam.55.345	2009
	Dissemination and Comparison of Genetic Determinants of mcr-Mediated Colistin Resistance in Enterobacteriaceae via Retailed Raw Meat Products.	Gelbicova T, Barakova A, Florianova M, Jamborova I, Zelendova M, Pospisilova L, Kolackova I, Karpiskova R.	Front Microbiol	10.3389/fmicb.2019.02824	2019
	Epidemiology of carbapenem-resistant Enterobacteriaceae in a Tertiary Care Center in the Kingdom of Bahrain.	Saeed NK, Alkhawaja S, Azam NFAEM, Alaradi K, Al-Biltagi M.	J Lab Physicians	10.4103/jlp.jlp_101_18	2019
Biotechnology	Microbial diversity and dynamics during the production of May bryndza cheese.	Pangallo D, Sakova N, Korenova J, Puskarova A, Krakova L, Valik L, Kuchta T.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2013.10.015	2014
Genetics	Comparative genomics of Tn6411 transposons carrying the blaIMP-1 gene in Pseudomonas aeruginosa.	Zheng L, Wang Z, Guo J, Guan J, Lu G, Jing J, Sun S, Sun Y, Ji X, Jiang B, Wang Y, Zhao C, Zhu L, Guo X.	PLoS One	10.1371/journal.pone.0306442	2024
	Novel 4th-generation phytase improves broiler growth performance and reduces woody breast severity through modulation of muscle glucose uptake and metabolism.	Walk CL, Mullenix GJ, Maynard CW, Greene ES, Maynard C, Ward N, Dridi S.	Front Physiol	10.3389/fphys.2024.1376628	2024
	Microorganisms Resistant to Antimicrobials in Wild Canarian Egyptian Vultures (Neophron percnopterus majorensis).	Suarez-Perez A, Corbera JA, Gonzalez-Martin M, Donazar JA, Rosales RS, Morales M, Tejedor-Junco MT.	Animals (Basel)	10.3390/ani10060970	2020
	Occurrence of Plasmid- and Chromosome-Carried mcr-1 in Waterborne Enterobacteriaceae in China.	Zhou HW, Zhang T, Ma JH, Fang Y, Wang HY, Huang ZX, Wang Y, Wu C, Chen GX.	Antimicrob Agents Chemother	10.1128/aac.00017-17	2017
	Resveratrol Increases Sensitivity of Clinical Colistin-Resistant Pseudomonas aeruginosa to Colistin In Vitro and In Vivo.	Wang L, Zhang Y, Lin Y, Cao J, Xu C, Chen L, Wang Y, Sun Y, Zheng X, Liu Y, Zhou T.	Microbiol Spectr	10.1128/spectrum.01992-22	2023
	Case report: Endolymphatic system disease in elasmobranchs: clinical presentation, diagnosis, and treatment strategies.	Greene W, Pereira N, Doescher B, Rojo-Solis C, David H, Faustino R, Reese D, De Voe R, Latson E, Mylniczenko N.	Front Vet Sci	10.3389/fvets.2024.1463428	2024
	Endoparasites infecting exotic captive amphibian pet and zoo animals (Anura, Caudata) in Germany.	Hallinger MJ, Taubert A, Hermosilla C.	Parasitol Res	10.1007/s00436-020-06876-0	2020
	Occurrence of bla_NDM Variants Among Enterobacteriaceae From a Neonatal Intensive Care Unit in a Northern India Hospital.	Ahmad N, Khalid S, Ali SM, Khan AU.	Front Microbiol	10.3389/fmicb.2018.00407	2018
	Toxicological studies on a novel phytase expressed from synthetic genes in Aspergillus oryzae.	Lichtenberg J, Pedersen PB, Elvig-Joergensen SG, Skov LK, Olsen CL, Glitsoe LV.	Regul Toxicol Pharmacol	10.1016/j.yrtph.2011.05.010	2011
	Molecular Characterization and Diversity of Bacteria Isolated from Fish and Fish Products Retailed in Kenyan Markets.	Kyule DN, Maingi JM, Njeru EM, Nyamache AK.	Int J Food Sci	10.1155/2022/2379323	2022
	Methylglyoxal: Antimicrobial activity against blood culture isolates of Salmonella Typhi and other Gram negative rods.	Afzal RK, Khalid F, Hannan A, Ahmed SA.	Pak J Med Sci	10.12669/pjms.35.4.807	2019
	The Prevalence and Characterization of Extended-Spectrum beta-Lactamase- and Carbapenemase-Producing Bacteria from Hospital Sewage, Treated Effluents and Receiving Rivers.	Zhang L, Ma X, Luo L, Hu N, Duan J, Tang Z, Zhong R, Li Y.	Int J Environ Res Public Health	10.3390/ijerph17041183	2020
	Use of fixed calcium to phosphorus ratios in experimental diets may create bias in phytase efficacy responses in swine.	Zhai H, Bergstrom JR, Zhang J, Dong W, Wang Z, Stamatopoulos K, Cowieson AJ.	Transl Anim Sci	10.1093/tas/txac124	2022
	Structures of the O-polysaccharides of Salmonella enterica O59 and Escherichia coli O15.	Perepelov AV, Liu B, Senchenkova SN, Shashkov AS, Guo D, Feng L, Knirel YA, Wang L.	Carbohydr Res	10.1016/j.carres.2010.11.017	2011
	A rare case of perforated descending colon cancer complicated with a fistula and abscess of left iliopsoas and ipsilateral obturator muscle.	Cacurri A, Cannata G, Trastulli S, Desiderio J, Mangia A, Adamenko O, Pressi E, Giovannelli G, Noya G, Parisi A.	Case Rep Surg	10.1155/2014/128506	2014
	Identification of environmental aquatic bacteria by mass spectrometry supported by biochemical differentiation.	Topic Popovic N, Kepec S, Kazazic SP, Strunjak-Perovic I, Bojanic K, Coz-Rakovac R.	PLoS One	10.1371/journal.pone.0269423	2022
	Antibiotic sensitivity and resistance of bacteria from odontogenic maxillofacial abscesses.	Kang SH, Kim MK.	J Korean Assoc Oral Maxillofac Surg	10.5125/jkaoms.2019.45.6.324	2019
Enzymology	Fecal colonization of Enterobacteriaceae carrying plasmid-mediated quinolone resistance determinants in Korea.	Jeong HS, Bae IK, Shin JH, Kim SH, Chang CL, Jeong J, Kim S, Lee CH, Ryoo NH, Lee JN.	Microb Drug Resist	10.1089/mdr.2011.0040	2011
	Clinical implications of Paracoccus yeeii bacteremia in a patient with decompensated cirrhosis.	Sack J, Peaper DR, Mistry P, Malinis M.	IDCases	10.1016/j.idcr.2016.11.008	2017
	Colistin Resistance and Molecular Characterization of the Genomes of mcr-1-Positive Escherichia coli Clinical Isolates.	Li Q, Qian C, Zhang X, Zhu T, Shi W, Gao M, Feng C, Xu M, Lin H, Lin L, Lu J, Lin X, Li K, Xu T, Bao Q, Li C, Zhang H.	Front Cell Infect Microbiol	10.3389/fcimb.2022.854534	2022
Metabolism	Palladium nanoparticles produced by fermentatively cultivated bacteria as catalyst for diatrizoate removal with biogenic hydrogen.	Hennebel T, Van Nevel S, Verschuere S, De Corte S, De Gusseme B, Cuvelier C, Fitts JP, van der Lelie D, Boon N, Verstraete W.	Appl Microbiol Biotechnol	10.1007/s00253-011-3329-9	2011
	Characterization of a Virally Encoded Flavodoxin That Can Drive Bacterial Cytochrome P450 Monooxygenase Activity.	Lamb DC, Goldstone JV, Zhao B, Lei L, Mullins JGL, Allen MJ, Kelly SL, Stegeman JJ.	Biomolecules	10.3390/biom12081107	2022
	Clinical characteristics, diagnosis, outcomes and lung microbiome analysis of invasive pulmonary aspergillosis in the community-acquired pneumonia patients.	Ao Z, Xu H, Li M, Liu H, Deng M, Liu Y.	BMJ Open Respir Res	10.1136/bmjresp-2022-001358	2023
	Evaluation of the efficacy of a novel phytase in short-term digestibility and long-term egg production studies with laying hens.	Zhai HX, Wang JP, Zhang Q, Aureli R, Tschambser A, Faruk MU.	Poult Sci	10.1016/j.psj.2022.101894	2022
	Prevalence and pathologic effects of colibactin and cytotoxic necrotizing factor-1 (Cnf 1) in Escherichia coli: experimental and bioinformatics analyses.	Morgan RN, Saleh SE, Farrag HA, Aboulwafa MM.	Gut Pathog	10.1186/s13099-019-0304-y	2019
Pathogenicity	Comparison of antimicrobial efficacy of a fixed dose combination of ceftazidime + sulbactam with ceftazidime and sulbactam alone against five bacteria.	Shrivastava SM, Shukla SK, Chaudhary M.	Folia Microbiol (Praha)	10.1007/s12223-009-0054-1	2009
	Engineering the expression system for Komagataella phaffii (Pichia pastoris): an attempt to develop a methanol-free expression system.	Takagi S, Tsutsumi N, Terui Y, Kong X, Yurimoto H, Sakai Y.	FEMS Yeast Res	10.1093/femsyr/foz059	2019
	Prevalence and molecular characteristics of mcr-1 gene in Salmonella typhimurium in a tertiary hospital of Zhejiang Province.	Lu J, Quan J, Zhao D, Wang Y, Yu Y, Zhu J.	Infect Drug Resist	10.2147/idr.s190269	2019
	Epidemiology, microbiology and therapeutic consequences of chronic osteomyelitis in northern China: A retrospective analysis of 255 Patients.	Ma X, Han S, Ma J, Chen X, Bai W, Yan W, Wang K.	Sci Rep	10.1038/s41598-018-33106-6	2018
	Sequence-based epidemiology of an OXA-48 plasmid during a hospital outbreak.	Hidalgo L, de Been M, Rogers MRC, Schurch AC, Scharringa J, van der Zee A, Bonten MJM, Fluit AC.	Antimicrob Agents Chemother	10.1128/aac.01204-19	2019
Enzymology	Characterization of arylsulfatase formed by derepressed synthesis in Citrobacter braakii.	Miura T, Okamoto K, Yanase H.	Biosci Biotechnol Biochem	10.1271/bbb.50651	2006
	Assessment of technological characteristics and microbiological quality of marinated turkey meat with the use of dairy products and lemon juice.	Augustynska-Prejsnar A, Hanus P, Sokolowicz Z, Kacaniova M.	Anim Biosci	10.5713/ab.21.0120	2021
	Safety and efficacy profile of a phytase produced by fermentation and used as a feed additive.	Thorsen M, Nielsen LA, Zhai HX, Zhang Q, Wulf-Andersen L, Skov LK.	Heliyon	10.1016/j.heliyon.2021.e07237	2021
Metabolism	Production of biogenic amines "in vitro" in relation to the growth phase by Enterobacteriaceae species isolated from traditional sausages.	Lorenzo JM, Cachaldora A, Fonseca S, Gomez M, Franco I, Carballo J.	Meat Sci	10.1016/j.meatsci.2010.06.005	2010
	Discovery and structure of the antimicrobial lasso peptide citrocin.	Cheung-Lee WL, Parry ME, Jaramillo Cartagena A, Darst SA, Link AJ.	J Biol Chem	10.1074/jbc.ra118.006494	2019
Phylogeny	Characterization of Microbiological Quality of Whole and Gutted Baltic Herring.	Huotari J, Tsitko I, Honkapaa K, Alakomi HL.	Foods	10.3390/foods11040492	2022
	Effect of high-phytase supplementation in lactation diets on sow and litter performance.	Batson KL, Calderon HI, Goodband RD, Woodworth JC, Tokach MD, Dritz SS, DeRouchey JM.	Transl Anim Sci	10.1093/tas/txaa227	2021
	Persistence of Antibiotic-Resistant Escherichia coli Strains Belonging to the B2 Phylogroup in Municipal Wastewater under Aerobic Conditions.	Xie H, Ogura Y, Suzuki Y.	Antibiotics (Basel)	10.3390/antibiotics11020202	2022
	Polyclonal Spread of Fosfomycin Resistance among Carbapenemase-Producing Members of the Enterobacterales in the Czech Republic.	Mattioni Marchetti V, Kraftova L, Finianos M, Sourenian T, Hrabak J, Bitar I.	Microbiol Spectr	10.1128/spectrum.00095-23	2023
	The Mobilizable Plasmid P3 of Salmonella enterica Serovar Typhimurium SL1344 Depends on the P2 Plasmid for Conjugative Transfer into a Broad Range of Bacteria In Vitro and In Vivo.	Gaissmaier MS, Laganenka L, Herzog MK, Bakkeren E, Hardt WD.	J Bacteriol	10.1128/jb.00347-22	2022
Enzymology	A new method for gene synthesis and its high-level expression.	Cao SS, Hu ZQ.	J Microbiol Methods	10.1016/j.mimet.2009.08.018	2009
Pathogenicity	Antibiotic susceptibility profiles of uncommon bacterial species causing severe infections in Italy.	Nicolosi D, Nicolosi VM, Cappellani A, Nicoletti G, Blandino G.	J Chemother	10.1179/joc.2009.21.3.253	2009
Enzymology	Cloning, expression and purification of cindoxin, an unusual Fmn-containing cytochrome p450 redox partner.	Hawkes DB, Slessor KE, Bernhardt PV, De Voss JJ.	Chembiochem	10.1002/cbic.201000119	2010
Metabolism	Occurrence and characteristics of extended spectrum beta-lactamases-producing Enterobacteriaceae from foods of animal origin.	Tekiner IH, Ozpinar H.	Braz J Microbiol	10.1016/j.bjm.2015.11.034	2016
Phylogeny	Evaluation of the BYG Carba Test, a New Electrochemical Assay for Rapid Laboratory Detection of Carbapenemase-Producing Enterobacteriaceae.	Bogaerts P, Yunus S, Massart M, Huang TD, Glupczynski Y.	J Clin Microbiol	10.1128/jcm.02404-15	2016
Metabolism	Removal of selenate in river and drainage waters by Citrobacter braakii enhanced with zero-valent iron.	Zhang Y, Frankenberger WT.	J Agric Food Chem	10.1021/jf058124o	2006
	Description of 3 failed attempts to estimate the calcium equivalency of phytase for growth performance and tibia ash of broiler chickens when using graded dietary levels of limestone.	Walk CL, Osunbami OT, Adeola O.	Poult Sci	10.1016/j.psj.2023.103330	2024
	Colistin Resistance of Non-pathogenic Strains of Escherichia Coli Occurring as Natural Intestinal Flora in Broiler Chickens Treated and not Treated with Colistin Sulphate.	Majewski M, Lukomska A, Wilczynski J, Wystalska D, Racewicz P, Nowacka-Woszuk J, Pszczola M, Anusz K.	J Vet Res	10.2478/jvetres-2020-0060	2020
Enzymology	Isolation of faecal coliform bacteria from the American alligator (Alligator mississippiensis).	Johnston MA, Porter DE, Scott GI, Rhodes WE, Webster LF.	J Appl Microbiol	10.1111/j.1365-2672.2009.04498.x	2010
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Metabolism	Molecular cloning of the phytase gene from Citrobacter braakii and its expression in Saccharomyces cerevisiae.	Kim YO, Kim HW, Lee JH, Kim KK, Lee SJ.	Biotechnol Lett	10.1007/s10529-005-9684-9	2006
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Biotechnology	Potentially pathogenic bacteria isolated from Paipa cheese and its susceptibility profiles to antibiotics and biocides.	Castellanos-Rozo J, Perez Pulido R, Grande MJ, Lucas R, Galvez A.	Braz J Microbiol	10.1007/s42770-021-00522-2	2021
	Meropenem Versus Piperacillin-Tazobactam for Definitive Treatment of Bloodstream Infections Caused by AmpC beta-Lactamase-Producing Enterobacter spp, Citrobacter freundii, Morganella morganii, Providencia spp, or Serratia marcescens: A Pilot Multicenter Randomized Controlled Trial (MERINO-2).	Stewart AG, Paterson DL, Young B, Lye DC, Davis JS, Schneider K, Yilmaz M, Dinleyici R, Runnegar N, Henderson A, Archuleta S, Kalimuddin S, Forde BM, Chatfield MD, Bauer MJ, Lipman J, Harris-Brown T, Harris PNA, MERINO Trial Investigators and the Australasian Society for Infectious Disease Clinical Research Network (ASID-CRN) .	Open Forum Infect Dis	10.1093/ofid/ofab387	2021
	The hydrophobicity of enterobacteria and their co-aggregation with Enterococcus faecalis isolated from Serbian cheese.	MladenoviC KG, GrujoviC MZ, NikodijeviC DD, ComiC LR.	Biosci Microbiota Food Health	10.12938/bmfh.2020-004	2020
	Bioaugmentation With a Consortium of Bacterial Sodium Lauryl Ether Sulfate-Degraders for Remediation of Contaminated Soils.	Rolando L, Barra Caracciolo A, Grenni P, Mariani L, Rauseo J, Spataro F, Garbini GL, Visca A, Patrolecco L.	Front Microbiol	10.3389/fmicb.2021.740118	2021
Metabolism	Cloning and Expression of Phytase appA Gene from Shigella sp. CD2 in Pichia pastoris and Comparison of Properties with Recombinant Enzyme Expressed in E. coli.	Pal Roy M, Mazumdar D, Dutta S, Saha SP, Ghosh S.	PLoS One	10.1371/journal.pone.0145745	2016
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	Small Molecule Adjuvants Potentiate Colistin Activity and Attenuate Resistance Development in Escherichia coli by Affecting pmrAB System.	Kathayat D, Antony L, Deblais L, Helmy YA, Scaria J, Rajashekara G.	Infect Drug Resist	10.2147/idr.s260766	2020
Pathogenicity	Analysis of bacteriological pollution and the detection of antibiotic resistance genes of prevailing bacteria emanating from pig farm seepage.	Matjuda DS, Aiyegoro OA.	Microbiologyopen	10.1002/mbo3.737	2019
	Effect of a biosynthetic bacterial 6-phytase on the digestibility of phosphorus and phytate in midlactating dairy cows.	Dersjant-Li Y, Kok I, Westreicher-Kristen E, Garcia-Gonzalez R, Mereu A, Christensen T, Marchal L.	J Anim Sci	10.1093/jas/skad032	2023
	A Multicenter Clinical Study To Demonstrate the Diagnostic Accuracy of the GenMark Dx ePlex Blood Culture Identification Gram-Negative Panel.	Wolk DM, Young S, Whitfield NN, Reid JL, Thornberg A, Carroll KC, Buchan BW, Davis TE, Salimnia H.	J Clin Microbiol	10.1128/jcm.02484-20	2021
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	Engineering of Yarrowia lipolytica for the production of plant triterpenoids: Asiatic, madecassic, and arjunolic acids.	Arnesen JA, Belmonte Del Ama A, Jayachandran S, Dahlin J, Rago D, Andersen AJC, Borodina I.	Metab Eng Commun	10.1016/j.mec.2022.e00197	2022
	Gastroscopy-related peritonitis in peritoneal dialysis patients.	Nadeau-Fredette AC, Bargman JM.	Perit Dial Int	10.3747/pdi.2012.00340	2014
	Differential responses of the gut microbiome and resistome to antibiotic exposures in infants and adults.	Li X, Brejnrod A, Thorsen J, Zachariasen T, Trivedi U, Russel J, Vestergaard GA, Stokholm J, Rasmussen MA, Sorensen SJ.	Nat Commun	10.1038/s41467-023-44289-6	2023
	The effect of short-term phytase supplementation on the apparent total tract digestibility of calcium and phosphorus and the reproductive performance of late gestation and lactating sows fed diets without mineral phosphorus.	Zhai H, Cowieson AJ, Pappenberger G, Zhang J, Wu J.	J Anim Sci	10.1093/jas/skab194	2021
	High doses of phytase on growth performance, bone mineralization, diet utilization, and plasmatic myo-inositol of turkey poults.	Bassi LS, Teixeira LV, Sens RF, Almeida L, Zavelinski VAB, Maiorka A.	Poult Sci	10.1016/j.psj.2021.101050	2021
	Similarities in Virulence and Extended Spectrum Beta-Lactamase Gene Profiles among Cefotaxime-Resistant Escherichia coli Wastewater and Clinical Isolates.	Liedhegner E, Bojar B, Beattie RE, Cahak C, Hristova KR, Skwor T.	Antibiotics (Basel)	10.3390/antibiotics11020260	2022
	High beta-lactam resistance in Gram-negative bacteria associated with kennel cough and cat flu in Egypt.	Khalifa HO, Oreiby AF, Okanda T, Kato Y, Matsumoto T.	Sci Rep	10.1038/s41598-021-82061-2	2021
	NitroSpeed-Carba NP Test for Rapid Detection and Differentiation between Different Classes of Carbapenemases in Enterobacterales.	Nordmann P, Sadek M, Demord A, Poirel L.	J Clin Microbiol	10.1128/jcm.00932-20	2020
	Rapid Increase in the IS26-Mediated cfr Gene in E. coli Isolates with IncP and IncX4 Plasmids and Co-Existing cfr and mcr-1 Genes in a Swine Farm.	Ma Z, Liu J, Chen L, Liu X, Xiong W, Liu JH, Zeng Z.	Pathogens	10.3390/pathogens10010033	2021
	Occurrence of High Levels of Cefiderocol Resistance in Carbapenem-Resistant Escherichia coli before Its Approval in China: a Report from China CRE-Network.	Wang Q, Jin L, Sun S, Yin Y, Wang R, Chen F, Wang X, Zhang Y, Hou J, Zhang Y, Zhang Z, Luo L, Guo Z, Li Z, Lin X, Bi L, Wang H.	Microbiol Spectr	10.1128/spectrum.02670-21	2022
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Enzymology	Isolation and characterization of a phytase with improved properties from Citrobacter braakii.	Kim HW, Kim YO, Lee JH, Kim KK, Kim YJ.	Biotechnol Lett	10.1023/a:1025020309596	2003
	A practical synthesis of alpha-D-Manp-(1-->3)-alpha-D-Manp-(1-->2)-[alpha-D-Glcp-(1-->3)]-alpha-D-Manp-(1-->2)-alpha-D-Manp-(1-->2)-alpha-D-Manp, an O-specific heterohexasaccharide fragment of Citrobacter braakii O7a, 3b, 1c.	Chen L, Kong F.	Carbohydr Res	10.1016/s0008-6215(03)00381-1	2003
Metabolism	The rise and spread of mcr plasmid-mediated polymyxin resistance.	Nang SC, Li J, Velkov T.	Crit Rev Microbiol	10.1080/1040841x.2018.1492902	2019
Phylogeny	A novel phytase with preferable characteristics from Yersinia intermedia.	Huang H, Luo H, Yang P, Meng K, Wang Y, Yuan T, Bai Y, Yao B.	Biochem Biophys Res Commun	10.1016/j.bbrc.2006.09.118	2006
	Intense intestinal carriage and subsequent acquisition of multidrug-resistant enterobacteria in neonatal intensive care unit in Morocco.	Arhoune B, El Fakir S, Himri S, Moutaouakkil K, El Hassouni S, Benboubker M, Hmami F, Oumokhtar B.	PLoS One	10.1371/journal.pone.0251810	2021
	Multicenter Evaluation of Ceftazidime-Avibactam Susceptibility Testing of Enterobacterales and Pseudomonas aeruginosa on the Vitek 2 System.	Humphries R, Campeau S, Davis TE, Nagaro KJ, LaBombardi VJ, Franklin S, Heimbach L, Dwivedi HP.	J Clin Microbiol	10.1128/jcm.01870-20	2021
Phylogeny	Sepsis in a renal transplant recipient due to Citrobacter braakii.	Gupta R, Rauf SJ, Singh S, Smith J, Agraharkar ML.	South Med J	10.1097/01.smj.0000051068.52066.e2	2003
	Environmental isolates of Citrobacter braakii that agglutinate with Escherichia coli O157 antiserum but do not possess the genes responsible for the biosynthesis of O157 somatic antigen.	Khan A, Nandi RK, Das SC, Ramamurthy T, Khanam J, Shimizu T, Yamasaki S, Bhattacharya SK, Chaicumpa W, Takeda Y, Balakrish Nair G.	Epidemiol Infect	10.1017/s0950268802008117	2003
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Phylogeny	Persistence of microbial communities including Pseudomonas aeruginosa in a hospital environment: a potential health hazard.	de Abreu PM, Farias PG, Paiva GS, Almeida AM, Morais PV.	BMC Microbiol	10.1186/1471-2180-14-118	2014
	Complete Genomic Analysis of a Salmonella enterica Serovar Typhimurium Isolate Cultured From Ready-to-Eat Pork in China Carrying One Large Plasmid Containing mcr-1.	Wang W, Baloch Z, Zou M, Dong Y, Peng Z, Hu Y, Xu J, Yasmeen N, Li F, Fanning S.	Front Microbiol	10.3389/fmicb.2018.00616	2018
	Effect of Phytase Derived from the E. coli AppA Gene on Weaned Piglet Performance, Apparent Total Tract Digestibility and Bone Mineralization.	Wisniewska Z, Nollet L, Lanckriet A, Vanderbeke E, Petkov S, Outchkourov N, Kasprowicz-Potocka M, Zaworska-Zakrzewska A, Kaczmarek SA.	Animals (Basel)	10.3390/ani10010121	2020
Metabolism	Characterization of the Enterobacteriaceae isolated from an artisanal Italian ewe's cheese (Pecorino Abruzzese).	Chaves-Lopez C, De Angelis M, Martuscelli M, Serio A, Paparella A, Suzzi G.	J Appl Microbiol	10.1111/j.1365-2672.2006.02941.x	2006
	Emergence of plasmid-mediated mcr genes from Gram-negative bacteria at the human-animal interface.	Javed H, Saleem S, Zafar A, Ghafoor A, Shahzad AB, Ejaz H, Junaid K, Jahan S.	Gut Pathog	10.1186/s13099-020-00392-3	2020
Metabolism	Effect of two phytases at two doses on performance and phytate degradation in broilers during 1-21 days of age.	Dersjant-Li Y, Davin R, Christensen T, Kwakernaak C.	PLoS One	10.1371/journal.pone.0247420	2021
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Genetics	Comparison of De Novo Assembly Strategies for Bacterial Genomes.	Zhang P, Jiang D, Wang Y, Yao X, Luo Y, Yang Z.	Int J Mol Sci	10.3390/ijms22147668	2021
	Cloning and sequencing of the beta-lactamase gene and surrounding DNA sequences of Citrobacter braakii, Citrobacter murliniae, Citrobacter werkmanii, Escherichia fergusonii and Enterobacter cancerogenus.	Naas T, Aubert D, Fortineau N, Nordmann P.	FEMS Microbiol Lett	10.1111/j.1574-6968.2002.tb11374.x	2002
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Genetics	Metagenome Sequencing Reveals the Midgut Microbiota Makeup of Culex pipiens quinquefasciatus and Its Possible Relationship With Insecticide Resistance.	Wang YT, Shen RX, Xing D, Zhao CP, Gao HT, Wu JH, Zhang N, Zhang HD, Chen Y, Zhao TY, Li CX.	Front Microbiol	10.3389/fmicb.2021.625539	2021
	Structure of the O-specific polysaccharide of Citrobacter braakii O7a,3b,1c.	Kocharova NA, Zatonsky GV, Bystrova OV, Shashkov AS, Knirel YA, Kholodkova EV, Stanislavsky ES.	Carbohydr Res	10.1016/s0008-6215(01)00158-6	2001
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Phylogeny	Population Screening Using Sewage Reveals Pan-Resistant Bacteria in Hospital and Community Samples.	Meir-Gruber L, Manor Y, Gefen-Halevi S, Hindiyeh MY, Mileguir F, Azar R, Smollan G, Belausov N, Rahav G, Shamiss A, Mendelson E, Keller N.	PLoS One	10.1371/journal.pone.0164873	2016
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	The ISApl1 ₂ Dimer Circular Intermediate Participates in mcr-1 Transposition.	He YZ, Li XP, Miao YY, Lin J, Sun RY, Wang XP, Guo YY, Liao XP, Liu YH, Feng Y, Sun J.	Front Microbiol	10.3389/fmicb.2019.00015	2019
Enzymology	Isolation and characterisation of bacterial strains containing enantioselective DMSO reductase activity: application to the kinetic resolution of racemic sulfoxides.	Luckarift HR, Dalton H, Sharma ND, Boyd DR, Holt RA.	Appl Microbiol Biotechnol	10.1007/s00253-004-1667-6	2004
	Intracranial complication of rhinosinusitis from actinomycosis of the paranasal sinuses: a rare case of abducens nerve palsy.	Fadda GL, Gisolo M, Crosetti E, Fulcheri A, Succo G.	Case Rep Otolaryngol	10.1155/2014/601671	2014
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Enzymology	Stereoselective reductase-catalysed deoxygenation of sulfoxides in aerobic and anaerobic bacteria.	Boyd DR, Sharma ND, King AW, Shepherd SD, Allen CC, Holt RA, Luckarift HR, Dalton H.	Org Biomol Chem	10.1039/b313714g	2004
Biotechnology	Contribution of Selective Conditions to Microbial Competition in Four Listeria Selective Enrichment Formulations.	Keys AL, Hitchins AD, Smiley RD.	J Food Prot	10.4315/0362-028x.jfp-16-216	2016
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	Germination, root elongation, and photosynthetic performance of plants exposed to sodium lauryl ether sulfate (SLES): an emerging contaminant.	Salvatori E, Rauseo J, Patrolecco L, Barra Caracciolo A, Spataro F, Fusaro L, Manes F.	Environ Sci Pollut Res Int	10.1007/s11356-021-12574-w	2021
	Genomic Epidemiology Insights on NDM-Producing Pathogens Revealed the Pivotal Role of Plasmids on bla_NDM Transmission.	Dong H, Li Y, Cheng J, Xia Z, Liu W, Yan T, Chen F, Wang Z, Li R, Shi J, Qin S.	Microbiol Spectr	10.1128/spectrum.02156-21	2022
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	Effect of different doses of phytase and protein content of soybean meal on growth performance, nutrient digestibility, and bone characteristics of broilers.	Sens RF, Bassi LS, Almeida LM, Rosso DF, Teixeira LV, Maiorka A.	Poult Sci	10.1016/j.psj.2020.12.015	2021
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	Characterization of beta-Lactamases and Multidrug Resistance Mechanisms in Enterobacterales from Hospital Effluents and Wastewater Treatment Plant.	Mutuku C, Melegh S, Kovacs K, Urban P, Virag E, Heninger R, Herczeg R, Sonnevend A, Gyenesei A, Fekete C, Gazdag Z.	Antibiotics (Basel)	10.3390/antibiotics11060776	2022
Metabolism	The effects of competition from non-pathogenic foodborne bacteria during the selective enrichment of Listeria monocytogenes using buffered Listeria enrichment broth.	Dailey RC, Martin KG, Smiley RD.	Food Microbiol	10.1016/j.fm.2014.05.004	2014
Metabolism	CYP101J2, CYP101J3, and CYP101J4, 1,8-Cineole-Hydroxylating Cytochrome P450 Monooxygenases from Sphingobium yanoikuyae Strain B2.	Unterweger B, Bulach DM, Scoble J, Midgley DJ, Greenfield P, Lyras D, Johanesen P, Dumsday GJ.	Appl Environ Microbiol	10.1128/aem.02067-16	2016
	Predicting Infectious ComplicatioNs in Children with Cancer: an external validation study.	Haeusler GM, Thursky KA, Mechinaud F, Babl FE, De Abreu Lourenco R, Slavin MA, Phillips R.	Br J Cancer	10.1038/bjc.2017.154	2017
Metabolism	Nitrogen retention, energy, and amino acid digestibility of wheat bran, without or with multicarbohydrase and phytase supplementation, fed to broiler chickens.	Gallardo C, Dadalt JC, Trindade Neto MA.	J Anim Sci	10.1093/jas/sky062	2018
Pathogenicity	Characterization of multidrug-resistant Gram-negative bacilli isolated from hospitals effluents: first report of a bla_OXA-48-like in Klebsiella oxytoca, Algeria.	Yousfi K, Touati A, Lefebvre B, Garneau P, Brahmi S, Gharout-Sait A, Harel J, Bekal S.	Braz J Microbiol	10.1007/s42770-018-0010-9	2019
Pathogenicity	Integron Digestive Carriage in Human and Cattle: A "One Health" Cultivation-Independent Approach.	Chainier D, Barraud O, Masson G, Couve-Deacon E, Francois B, Couquet CY, Ploy MC.	Front Microbiol	10.3389/fmicb.2017.01891	2017
	Disulfide bond engineering of AppA phytase for increased thermostability requires co-expression of protein disulfide isomerase in Pichia pastoris.	Navone L, Vogl T, Luangthongkam P, Blinco JA, Luna-Flores CH, Chen X, von Hellens J, Mahler S, Speight R.	Biotechnol Biofuels	10.1186/s13068-021-01936-8	2021
Enzymology	High prevalence of carriage of mcr-1-positive enteric bacteria among healthy children from rural communities in the Chaco region, Bolivia, September to October 2016.	Giani T, Sennati S, Antonelli A, Di Pilato V, di Maggio T, Mantella A, Niccolai C, Spinicci M, Monasterio J, Castellanos P, Martinez M, Contreras F, Balderrama Villaroel D, Damiani E, Maury S, Rocabado R, Pallecchi L, Bartoloni A, Rossolini GM.	Euro Surveill	10.2807/1560-7917.es.2018.23.45.1800115	2018
Phylogeny	Performances of the Vitek MS matrix-assisted laser desorption ionization-time of flight mass spectrometry system for rapid identification of bacteria in routine clinical microbiology.	Dubois D, Grare M, Prere MF, Segonds C, Marty N, Oswald E.	J Clin Microbiol	10.1128/jcm.00343-12	2012
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Enzymology	Cytochrome P450(cin) (CYP176A), isolation, expression, and characterization.	Hawkes DB, Adams GW, Burlingame AL, Ortiz de Montellano PR, De Voss JJ.	J Biol Chem	10.1074/jbc.m203382200	2002
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	Screening of SDS-degrading bacteria from car wash wastewater and study of the alkylsulfatase enzyme activity.	Shahbazi R, Kasra-Kermanshahi R, Gharavi S, Moosavi-Nejad Z, Borzooee F.	Iran J Microbiol		2013
	Endoscopic ultrasound-guided drainage of pelvic abscess: A case series of 8 patients.	Hadithi M, Bruno MJ.	World J Gastrointest Endosc	10.4253/wjge.v6.i8.373	2014
	Successful Treatment of a Severe Case of Fournier's Gangrene Complicating a Perianal Abscess.	Papaconstantinou I, Yiallourou AI, Dafnios N, Grapsa I, Polymeneas G, Voros D.	Case Rep Med	10.1155/2011/702429	2011
Biotechnology	Accurate and sensitive detection of Salmonella in foods by engineered bacteriophages.	Nguyen MM, Gil J, Brown M, Cesar Tondo E, Soraya Martins de Aquino N, Eisenberg M, Erickson S.	Sci Rep	10.1038/s41598-020-74587-8	2020
	Effects of a novel E. coli phytase expressed in Pseudomonas fluorescens on growth, bone mineralization, and nutrient digestibility in pigs fed corn-soybean meal diets.	Ren P, Blavi L, Gonzalez-Vega C, Liu Y, Hancock D, Vazquez-Anon M, Almeida FN, Stein HH.	Transl Anim Sci	10.1093/tas/txaa201	2020
	Fitness Advantage of mcr-1-Bearing IncI2 and IncX4 Plasmids in Vitro.	Wu R, Yi LX, Yu LF, Wang J, Liu Y, Chen X, Lv L, Yang J, Liu JH.	Front Microbiol	10.3389/fmicb.2018.00331	2018
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Genetics	Comparative Genomic Analysis of Citrobacter and Key Genes Essential for the Pathogenicity of Citrobacter koseri.	Yuan C, Yin Z, Wang J, Qian C, Wei Y, Zhang S, Jiang L, Liu B.	Front Microbiol	10.3389/fmicb.2019.02774	2019
Enzymology	Microbial Fibrinolytic Enzymes as Anti-Thrombotics: Production, Characterisation and Prodigious Biopharmaceutical Applications.	Sharma C, Osmolovskiy A, Singh R.	Pharmaceutics	10.3390/pharmaceutics13111880	2021
	Symbiotic bacteria motivate the foraging decision and promote fecundity and survival of Bactrocera dorsalis (Diptera: Tephritidae).	Akami M, Ren XM, Qi X, Mansour A, Gao B, Cao S, Niu CY.	BMC Microbiol	10.1186/s12866-019-1607-3	2019
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Enzymology	High prevalence of Salmonella and IMP-4-producing Enterobacteriaceae in the silver gull on Five Islands, Australia.	Dolejska M, Masarikova M, Dobiasova H, Jamborova I, Karpiskova R, Havlicek M, Carlile N, Priddel D, Cizek A, Literak I.	J Antimicrob Chemother	10.1093/jac/dkv306	2016
	The Porcine Nasal Microbiota with Particular Attention to Livestock-Associated Methicillin-Resistant Staphylococcus aureus in Germany-A Culturomic Approach.	Schlattmann A, von Lutzau K, Kaspar U, Becker K.	Microorganisms	10.3390/microorganisms8040514	2020
Genetics	Expanding landscapes of the diversified mcr-1-bearing plasmid reservoirs.	Wang Q, Sun J, Li J, Ding Y, Li XP, Lin J, Hassan B, Feng Y.	Microbiome	10.1186/s40168-017-0288-0	2017
	Effects of phytase supplementation and increased nutrient density on growth performance, carcass characteristics, and hypothalamic appetitive hormone expression and catecholamine concentrations in broilers from 1 to 43 days of age.	Kriseldi R, Bedford MR, Dilger RN, Foradori CD, MacKay L, Dozier WA.	Poult Sci	10.1016/j.psj.2021.101495	2021
Enzymology	Comparison of Listeria monocytogenes recoveries from spiked mung bean sprouts by the enrichment methods of three regulatory agencies.	Cauchon KE, Hitchins AD, Smiley RD.	Food Microbiol	10.1016/j.fm.2017.03.021	2017
	Broadly reactive aptamers targeting bacteria belonging to different genera using a sequential toggle cell-SELEX.	Song MY, Nguyen D, Hong SW, Kim BC.	Sci Rep	10.1038/srep43641	2017
Biotechnology	[Identification of Citrobacter species and their occurrence in raw products and foods].	Urbanova E, Pacova Z.	Vet Med (Praha)		1997
Phylogeny	Multicentre evaluation of the BYG Carba v2.0 test, a simplified electrochemical assay for the rapid laboratory detection of carbapenemase-producing Enterobacteriaceae.	Bogaerts P, Oueslati S, Meunier D, Nonhoff C, Yunus S, Massart M, Denis O, Woodford N, Hopkins KL, Naas T, Dortet L, Huang TD, Glupczynski Y.	Sci Rep	10.1038/s41598-017-09820-y	2017
Phylogeny	Re-speciation of the original reference strains of serovars in the Citrobacter freundii (Bethesda-Ballerup group) antigenic scheme of West and edwards.	Miki K, Tamura K, Sakazaki R, Kosako Y.	Microbiol Immunol	10.1111/j.1348-0421.1996.tb01160.x	1996
Metabolism	Genomic epidemiology of global VIM-producing Enterobacteriaceae.	Matsumura Y, Peirano G, Devinney R, Bradford PA, Motyl MR, Adams MD, Chen L, Kreiswirth B, Pitout JDD.	J Antimicrob Chemother	10.1093/jac/dkx148	2017
Genetics	In-depth comparative analysis of Illumina^® MiSeq run metrics: Development of a wet-lab quality assessment tool.	Kastanis GJ, Santana-Quintero LV, Sanchez-Leon M, Lomonaco S, Brown EW, Allard MW.	Mol Ecol Resour	10.1111/1755-0998.12973	2019
	Comparative analysis of PCR-electrospray ionization/mass spectrometry (MS) and MALDI-TOF/MS for the identification of bacteria and yeast from positive blood culture bottles.	Kaleta EJ, Clark AE, Cherkaoui A, Wysocki VH, Ingram EL, Schrenzel J, Wolk DM.	Clin Chem	10.1373/clinchem.2011.161968	2011
Enzymology	Rapid identification of carbapenemase genes in gram-negative bacteria with an oligonucleotide microarray-based assay.	Braun SD, Monecke S, Thurmer A, Ruppelt A, Makarewicz O, Pletz M, Reibig A, Slickers P, Ehricht R.	PLoS One	10.1371/journal.pone.0102232	2014
	Platelet activation and prothrombotic properties in a mouse model of peritoneal sepsis.	Vardon Bounes F, Memier V, Marcaud M, Jacquemin A, Hamzeh-Cognasse H, Garcia C, Series J, Sie P, Minville V, Gratacap MP, Payrastre B.	Sci Rep	10.1038/s41598-018-31910-8	2018
Genetics	The global distribution and spread of the mobilized colistin resistance gene mcr-1.	Wang R, van Dorp L, Shaw LP, Bradley P, Wang Q, Wang X, Jin L, Zhang Q, Liu Y, Rieux A, Dorai-Schneiders T, Weinert LA, Iqbal Z, Didelot X, Wang H, Balloux F.	Nat Commun	10.1038/s41467-018-03205-z	2018
	Antimicrobial Resistance and Cytotoxicity of Citrobacter spp. in Maanshan Anhui Province, China.	Liu L, Lan R, Liu L, Wang Y, Zhang Y, Wang Y, Xu J.	Front Microbiol	10.3389/fmicb.2017.01357	2017
	Bloodstream bacterial infection among outpatient children with acute febrile illness in north-eastern Tanzania.	Mahende C, Ngasala B, Lusingu J, Butichi A, Lushino P, Lemnge M, Mmbando B, Premji Z.	BMC Res Notes	10.1186/s13104-015-1178-9	2015
	A novel consensus bacterial 6-phytase variant completely replaced inorganic phosphate in broiler diets, maintaining growth performance and bone quality: data from two independent trials.	Marchal L, Bello A, Sobotik EB, Archer G, Dersjant-Li Y.	Poult Sci	10.1016/j.psj.2020.12.059	2021
Enzymology	Waste water effluent contributes to the dissemination of CTX-M-15 in the natural environment.	Amos GC, Hawkey PM, Gaze WH, Wellington EM.	J Antimicrob Chemother	10.1093/jac/dku079	2014
	Sepsis modeling in mice: ligation length is a major severity factor in cecal ligation and puncture.	Ruiz S, Vardon-Bounes F, Merlet-Dupuy V, Conil JM, Buleon M, Fourcade O, Tack I, Minville V.	Intensive Care Med Exp	10.1186/s40635-016-0096-z	2016
Metabolism	Differential Engagement of Fermentative Taxa in Gut Contents of the Earthworm Lumbricus terrestris.	Meier AB, Hunger S, Drake HL.	Appl Environ Microbiol	10.1128/aem.01851-17	2018
Metabolism	Prevalence of plasmid-mediated quinolone resistance and its association with extended-spectrum beta-lactamase and AmpC beta-lactamase in Enterobacteriaceae.	Jeong HS, Bae IK, Shin JH, Jung HJ, Kim SH, Lee JY, Oh SH, Kim HR, Chang CL, Kho WG, Lee JN.	Korean J Lab Med	10.3343/kjlm.2011.31.4.257	2011
Genetics	Enhancing the one health initiative by using whole genome sequencing to monitor antimicrobial resistance of animal pathogens: Vet-LIRN collaborative project with veterinary diagnostic laboratories in United States and Canada.	Ceric O, Tyson GH, Goodman LB, Mitchell PK, Zhang Y, Prarat M, Cui J, Peak L, Scaria J, Antony L, Thomas M, Nemser SM, Anderson R, Thachil AJ, Franklin-Guild RJ, Slavic D, Bommineni YR, Mohan S, Sanchez S, Wilkes R, Sahin O, Hendrix GK, Lubbers B, Reed D, Jenkins T, Roy A, Paulsen D, Mani R, Olsen K, Pace L, Pulido M, Jacob M, Webb BT, Dasgupta S, Patil A, Ramachandran A, Tewari D, Thirumalapura N, Kelly DJ, Rankin SC, Lawhon SD, Wu J, Burbick CR, Reimschuessel R.	BMC Vet Res	10.1186/s12917-019-1864-2	2019
	Influence of Renal Replacement Modalities on Amikacin Population Pharmacokinetics in Critically Ill Patients on Continuous Renal Replacement Therapy.	Roger C, Wallis SC, Muller L, Saissi G, Lipman J, Lefrant JY, Roberts JA.	Antimicrob Agents Chemother	10.1128/aac.00828-16	2016
Metabolism	Bio-palladium: from metal recovery to catalytic applications.	De Corte S, Hennebel T, De Gusseme B, Verstraete W, Boon N.	Microb Biotechnol	10.1111/j.1751-7915.2011.00265.x	2012
Metabolism	The critical role of substrate-protein hydrogen bonding in the control of regioselective hydroxylation in p450cin.	Meharenna YT, Slessor KE, Cavaignac SM, Poulos TL, De Voss JJ.	J Biol Chem	10.1074/jbc.m709722200	2008
Enzymology	Fatal cases of 2009 pandemic influenza A (H1N1) in Korea.	Kim HS, Kim JH, Shin SY, Kang YA, Lee HG, Kim JS, Lee JK, Cho B.	J Korean Med Sci	10.3346/jkms.2011.26.1.22	2011
Enzymology	Does nuclear tissue infected with bacteria following disc herniations lead to Modic changes in the adjacent vertebrae?	Albert HB, Lambert P, Rollason J, Sorensen JS, Worthington T, Pedersen MB, Norgaard HS, Vernallis A, Busch F, Manniche C, Elliott T.	Eur Spine J	10.1007/s00586-013-2674-z	2013
Enzymology	Evolutionary Relationships Between Low Potential Ferredoxin and Flavodoxin Electron Carriers.	Campbell IJ, Bennett GN, Silberg JJ.	Front Energy Res	10.3389/fenrg.2019.00079	2019
Metabolism	Sodium lauryl ether sulfate (SLES) degradation by nitrate-reducing bacteria.	Paulo AMS, Aydin R, Dimitrov MR, Vreeling H, Cavaleiro AJ, Garcia-Encina PA, Stams AJM, Plugge CM.	Appl Microbiol Biotechnol	10.1007/s00253-017-8212-x	2017
Pathogenicity	Gut symbiont enhances insecticide resistance in a significant pest, the oriental fruit fly Bactrocera dorsalis (Hendel).	Cheng D, Guo Z, Riegler M, Xi Z, Liang G, Xu Y.	Microbiome	10.1186/s40168-017-0236-z	2017
	In silico serine beta-lactamases analysis reveals a huge potential resistome in environmental and pathogenic species.	Brandt C, Braun SD, Stein C, Slickers P, Ehricht R, Pletz MW, Makarewicz O.	Sci Rep	10.1038/srep43232	2017
Phenotype	Multicenter Evaluation of the Accelerate PhenoTest BC Kit for Rapid Identification and Phenotypic Antimicrobial Susceptibility Testing Using Morphokinetic Cellular Analysis.	Pancholi P, Carroll KC, Buchan BW, Chan RC, Dhiman N, Ford B, Granato PA, Harrington AT, Hernandez DR, Humphries RM, Jindra MR, Ledeboer NA, Miller SA, Mochon AB, Morgan MA, Patel R, Schreckenberger PC, Stamper PD, Simner PJ, Tucci NE, Zimmerman C, Wolk DM.	J Clin Microbiol	10.1128/jcm.01329-17	2018
	Colistin-Resistant Enterobacteriaceae Isolated From Process Waters and Wastewater From German Poultry and Pig Slaughterhouses.	Savin M, Bierbaum G, Blau K, Parcina M, Sib E, Smalla K, Schmithausen R, Heinemann C, Hammerl JA, Kreyenschmidt J.	Front Microbiol	10.3389/fmicb.2020.575391	2020
Pathogenicity	Presence of multidrug-resistant enteric bacteria in dairy farm topsoil.	Burgos JM, Ellington BA, Varela MF.	J Dairy Sci	10.3168/jds.s0022-0302(05)72806-x	2005
Enzymology	High prevalence of qnr and aac(6')-Ib-cr genes in both water-borne environmental bacteria and clinical isolates of Citrobacter freundii in China.	Zhang R, Ichijo T, Huang YL, Cai JC, Zhou HW, Yamaguchi N, Nasu M, Chen GX.	Microbes Environ	10.1264/jsme2.me11308	2012
Pathogenicity	Dectin-2 Recognizes Mannosylated O-antigens of Human Opportunistic Pathogens and Augments Lipopolysaccharide Activation of Myeloid Cells.	Wittmann A, Lamprinaki D, Bowles KM, Katzenellenbogen E, Knirel YA, Whitfield C, Nishimura T, Matsumoto N, Yamamoto K, Iwakura Y, Saijo S, Kawasaki N.	J Biol Chem	10.1074/jbc.m116.741256	2016
Metabolism	Cloning and sequencing of the histidine decarboxylase genes of gram-negative, histamine-producing bacteria and their application in detection and identification of these organisms in fish.	Takahashi H, Kimura B, Yoshikawa M, Fujii T.	Appl Environ Microbiol	10.1128/aem.69.5.2568-2579.2003	2003
Metabolism	Structural biology of redox partner interactions in P450cam monooxygenase: a fresh look at an old system.	Sevrioukova IF, Poulos TL.	Arch Biochem Biophys	10.1016/j.abb.2010.08.022	2011
Phylogeny	Dissemination of Cronobacter spp. (Enterobacter sakazakii) in a powdered milk protein manufacturing facility.	Mullane N, Healy B, Meade J, Whyte P, Wall PG, Fanning S.	Appl Environ Microbiol	10.1128/aem.00745-08	2008
Pathogenicity	In Vitro Activity of Ceftazidime-Avibactam and Aztreonam-Avibactam against OXA-48-Carrying Enterobacteriaceae Isolated as Part of the International Network for Optimal Resistance Monitoring (INFORM) Global Surveillance Program from 2012 to 2015.	Kazmierczak KM, Bradford PA, Stone GG, de Jonge BLM, Sahm DF.	Antimicrob Agents Chemother	10.1128/aac.00592-18	2018
Stress	Using molecular dynamics to probe the structural basis for enhanced stability in thermal stable cytochromes P450.	Meharenna YT, Poulos TL.	Biochemistry	10.1021/bi100929x	2010
Pathogenicity	Low-virulence Citrobacter species encode resistance to multiple antimicrobials.	Pepperell C, Kus JV, Gardam MA, Humar A, Burrows LL.	Antimicrob Agents Chemother	10.1128/aac.46.11.3555-3560.2002	2002
Genetics	The genome sequence of Escherichia coli tailed phage D6 and the diversity of Enterobacteriales circular plasmid prophages.	Gilcrease EB, Casjens SR.	Virology	10.1016/j.virol.2017.12.019	2018
Cultivation	Comparison of media for the isolation of Enterobacter sakazakii.	Iversen C, Forsythe SJ.	Appl Environ Microbiol	10.1128/aem.01562-06	2007
	High prevalence of tuberculosis and serious bloodstream infections in ambulatory individuals presenting for antiretroviral therapy in Malawi.	Bedell RA, Anderson ST, van Lettow M, Akesson A, Corbett EL, Kumwenda M, Chan AK, Heyderman RS, Zachariah R, Harries AD, Ramsay AR.	PLoS One	10.1371/journal.pone.0039347	2012
Pathogenicity	Two-center collaborative evaluation of performance of the BD phoenix automated microbiology system for identification and antimicrobial susceptibility testing of gram-negative bacteria.	Menozzi MG, Eigner U, Covan S, Rossi S, Somenzi P, Dettori G, Chezzi C, Fahr AM.	J Clin Microbiol	10.1128/jcm.00614-06	2006
Genetics	Linking plasmid-based beta-lactamases to their bacterial hosts using single-cell fusion PCR.	Diebold PJ, New FN, Hovan M, Satlin MJ, Brito IL.	Elife	10.7554/elife.66834	2021
Metabolism	Bacteriocinogeny in experimental pigs treated with indomethacin and Escherichia coli Nissle.	Bures J, Smajs D, Kvetina J, Forstl M, Smarda J, Kohoutova D, Kunes M, Cyrany J, Tacheci I, Rejchrt S, Lesna J, Vorisek V, Kopacova M.	World J Gastroenterol	10.3748/wjg.v17.i5.609	2011
Metabolism	In vivo selection for the directed evolution of L-rhamnulose aldolase from L-rhamnulose-1-phosphate aldolase (RhaD).	Sugiyama M, Hong Z, Greenberg WA, Wong CH.	Bioorg Med Chem	10.1016/j.bmc.2007.05.062	2007
Metabolism	Display of recombinant proteins on Bacillus subtilis spores, using a coat-associated enzyme as the carrier.	Potot S, Serra CR, Henriques AO, Schyns G.	Appl Environ Microbiol	10.1128/aem.01103-10	2010
Metabolism	Degradation of phytate by the 6-phytase from Hafnia alvei: a combined structural and solution study.	Ariza A, Moroz OV, Blagova EV, Turkenburg JP, Waterman J, Roberts SM, Vind J, Sjoholm C, Lassen SF, De Maria L, Glitsoe V, Skov LK, Wilson KS.	PLoS One	10.1371/journal.pone.0065062	2013
	Nidovirus-Associated Proliferative Pneumonia in the Green Tree Python (Morelia viridis).	Dervas E, Hepojoki J, Laimbacher A, Romero-Palomo F, Jelinek C, Keller S, Smura T, Hepojoki S, Kipar A, Hetzel U.	J Virol	10.1128/jvi.00718-17	2017
Enzymology	A Review on Bio- and Chemosensors for the Detection of Biogenic Amines in Food Safety Applications: The Status in 2022.	Givanoudi S, Heyndrickx M, Depuydt T, Khorshid M, Robbens J, Wagner P.	Sensors (Basel)	10.3390/s23020613	2023
Pathogenicity	Prevalence of beta-lactamase-encoding genes among Enterobacteriaceae bacteremia isolates collected in 26 U.S. hospitals: report from the SENTRY Antimicrobial Surveillance Program (2010).	Castanheira M, Farrell SE, Deshpande LM, Mendes RE, Jones RN.	Antimicrob Agents Chemother	10.1128/aac.02252-12	2013
	Aromatic amino acid-dependent expression of indole-3-pyruvate decarboxylase is regulated by TyrR in Enterobacter cloacae UW5.	Ryu RJ, Patten CL.	J Bacteriol	10.1128/jb.00804-08	2008
Phylogeny	Microbial successions are associated with changes in chemical profiles of a model refrigerated fresh pork sausage during an 80-day shelf life study.	Benson AK, David JR, Gilbreth SE, Smith G, Nietfeldt J, Legge R, Kim J, Sinha R, Duncan CE, Ma J, Singh I.	Appl Environ Microbiol	10.1128/aem.00774-14	2014
Enzymology	Comparison of phenotypic and genotypic techniques for identification of unusual aerobic pathogenic gram-negative bacilli.	Tang YW, Ellis NM, Hopkins MK, Smith DH, Dodge DE, Persing DH.	J Clin Microbiol	10.1128/jcm.36.12.3674-3679.1998	1998
Enzymology	Insertion sequence ISEcp1B is involved in expression and mobilization of a bla(CTX-M) beta-lactamase gene.	Poirel L, Decousser JW, Nordmann P.	Antimicrob Agents Chemother	10.1128/aac.47.9.2938-2945.2003	2003
Metabolism	Cloning, sequencing, and characterization of the hexahydro-1,3,5-Trinitro-1,3,5-triazine degradation gene cluster from Rhodococcus rhodochrous.	Seth-Smith HM, Rosser SJ, Basran A, Travis ER, Dabbs ER, Nicklin S, Bruce NC.	Appl Environ Microbiol	10.1128/aem.68.10.4764-4771.2002	2002
Enzymology	Unusual spectroscopic and ligand binding properties of the cytochrome P450-flavodoxin fusion enzyme XplA.	Bui SH, McLean KJ, Cheesman MR, Bradley JM, Rigby SE, Levy CW, Leys D, Munro AW.	J Biol Chem	10.1074/jbc.m111.319202	2012
Pathogenicity	Ability of the VITEK 2 advanced expert system To identify beta-lactam phenotypes in isolates of Enterobacteriaceae and Pseudomonas aeruginosa.	Sanders CC, Peyret M, Moland ES, Shubert C, Thomson KS, Boeufgras JM, Sanders WE.	J Clin Microbiol	10.1128/jcm.38.2.570-574.2000	2000
	Draft Genome Sequence of the Halophilic Strain Citrobacter braakii AN-PRR1, Isolated from Rhizospheric Soil of Rice (Oryza sativa L.) from Pakistan.	Nawaz A, Mubeen F, Qamar ZU, Marghoob MU, Aziz S, Gross H.	Microbiol Resour Announc	10.1128/mra.00787-21	2021
	Simultaneous Detection of Salmonella spp. and Quantification of Campylobacter spp. in a Real-Time Duplex PCR: Myth or Reality?	Anis N, Bonifait L, Quesne S, Bauge L, Chemaly M, Guyard-Nicodeme M.	Pathogens	10.3390/pathogens12020338	2023
	Identification and Genome Analysis of an Arsenic-Metabolizing Strain of Citrobacter youngae IITK SM2 in Middle Indo-Gangetic Plain Groundwater.	Verma A, Murugan PA, Chinnasamy HV, Singh A, Matheshwaran S.	Biomed Res Int	10.1155/2022/6384742	2022
	Put a Bow on It: Knotted Antibiotics Take Center Stage.	Tan S, Moore G, Nodwell J.	Antibiotics (Basel)	10.3390/antibiotics8030117	2019
	Isolation and Characterization of Biosurfactant-Producing Bacteria from Amapaense Amazon Soils.	de Oliveira EM, Sales VHG, Andrade MS, Zilli JE, Borges WL, de Souza TM.	Int J Microbiol	10.1155/2021/9959550	2021
Pathogenicity	Characterization of qnrB-like genes in Citrobacter species of the American Type Culture Collection.	Saga T, Sabtcheva S, Mitsutake K, Ishii Y, Tateda K, Yamaguchi K, Kaku M	Antimicrob Agents Chemother	10.1128/AAC.02396-12	2013
Genetics	Precise Species Identification and Taxonomy Update for the Genus Kluyvera With Reporting Kluyvera sichuanensis sp. nov.	Liu L, Feng Y, Wei L, Qiao F, Zong Z.	Front Microbiol	10.3389/fmicb.2020.579306	2020
Phylogeny	Classification of citrobacteria by DNA hybridization: designation of Citrobacter farmeri sp. nov., Citrobacter youngae sp. nov., Citrobacter braakii sp. nov., Citrobacter werkmanii sp. nov., Citrobacter sedlakii sp. nov., and three unnamed Citrobacter genomospecies.	Brenner DJ, Grimont PA, Steigerwalt AG, Fanning GR, Ageron E, Riddle CF.	Int J Syst Bacteriol	10.1099/00207713-43-4-645	1993
Phylogeny	Biochemical identification of Citrobacter species defined by DNA hybridization and description of Citrobacter gillenii sp. nov. (formerly Citrobacter genomospecies 10) and Citrobacter murliniae sp. nov. (formerly Citrobacter genomospecies 11).	Brenner DJ, O'Hara CM, Grimont PA, Janda JM, Falsen E, Aldova E, Ageron E, Schindler J, Abbott SL, Steigerwalt AG.	J Clin Microbiol	10.1128/jcm.37.8.2619-2624.1999	1999

References

#7079	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17596
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#39041	; Curators of the CIP;
#50272	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30792
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68368	Automatically annotated from API 20E .
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#116986	Collection of Institut Pasteur ; Curators of the CIP; CIP 104554
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Citrobacter braakii (DSM 17596, ATCC 51113, CCUG 30792)

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