Name: Desulfuromonas palmitatis SDBY1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 4235

Type strain:

Species: Desulfuromonas palmitatis

Strain Designation: SDBY1

Culture col. no.: DSM 12391, ATCC 51701

Strain history: <- ATCC <- J.D. Coates, SDBY1

NCBI tax ID(s): 40982 (species)

SI-ID 45312

ATCC 51701, DSM 12391

Section

Desulfuromonas palmitatis SDBY1 is an anaerobe, mesophilic bacterium that was isolated from marine sediment.

anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Desulfuromonadales*
	Family	*Desulfuromonadaceae*
	Genus	*Desulfuromonas*
	Species	**Desulfuromonas palmitatis**
	Full Scientific Name (LPSN)	Desulfuromonas palmitatis Coates et al. 2000

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4626]

Culture medium

DESULFUROMONAS PALMITATIS MEDIUM (DSMZ Medium 837)

[Ref.: #4626]

Culture medium growth

[Ref.: #4626]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4626]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #4626]			growth	37 °C

[Ref.: #4626]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #4626]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4626]	Sample type/isolated from	marine sediment
[Ref.: #4626]	Geographic location (country and/or sea, region)	San Diego Bay near Patella Creek
[Ref.: #4626]	Country	USA
[Ref.: #4626]	Country ISO 3 Code	USA
[Ref.: #4626]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence U28172 (>99% sequence identity) for Desulfuromonas palmitatis subclade from Microbeatlas

Aquatic Samples	287
Soil Samples	113
Animal Samples	36
Plant Samples	2
Total Samples	438

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4626]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #4626]	Desulfuromonas palmitatis 16S ribosomal RNA gene, partial sequence	U28172	1471	ENA	40982 tax ID

Availability in culture collections External links

[Ref.: #4626]

Culture collection no.

DSM 12391, ATCC 51701

[Ref.: #73732]

SI-ID 45312

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Geoalkalibacter subterraneus sp. nov., an anaerobic Fe(III)- and Mn(IV)-reducing bacterium from a petroleum reservoir, and emended descriptions of the family Desulfuromonadaceae and the genus Geoalkalibacter.	Greene AC, Patel BK, Yacob S	Int J Syst Evol Microbiol	10.1099/ijs.0.001537-0	2009	*
Phylogeny	Desulfuromonas palmitatis sp. nov., a marine dissimilatory Fe(III) reducer that can oxidize long-chain fatty acids.	Coates JD, Lonergan DJ, Philips EJ, Jenter H, Lovley DR	Arch Microbiol		1995	*

References

#4626

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 12391

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#73732

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID45312.1 )

* These data were automatically processed and therefore are not curated

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