Desulfuromonas palmitatis (DSM 12391, ATCC 51701, SDBY1)

Name: Desulfuromonas palmitatis (DSM 12391, ATCC 51701, SDBY1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 4235

Type strain

Strain Designation SDBY1

Culture col. no. DSM 12391 ATCC 51701 SDBY1

NCBI tax ID(s) 40982

Special Collections DSMZ

Links

Desulfuromonas palmitatis SDBY1 is an anaerobe, mesophilic prokaryote that was isolated from marine sediment.

anaerobe mesophilic 16S sequence

Name and taxonomic classification

SI-ID 45312

ATCC 51701,DSM 12391

@ref 20215

Last LPSN update 2025-12-16 09:47:46

Domain Pseudomonadati

Phylum Thermodesulfobacteriota

Class Desulfuromonadia

Order Desulfuromonadales

Family Desulfuromonadaceae

Genus Desulfuromonas

Species Desulfuromonas palmitatis

Full scientific name Desulfuromonas palmitatis Coates et al. 2000

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
4626	DESULFUROMONAS PALMITATIS MEDIUM (DSMZ Medium 837)		Medium recipe at MediaDive	Name: DESULFUROMONAS PALMITATIS MEDIUM (DSMZ Medium 837) Composition: MgCl2 x 6 H2O 10.5788 g/l Na2-fumarate 7.98403 g/l CaCl2 x 2 H2O 1.49701 g/l Na-acetate x 3 H2O 1.37289 g/l NH4Cl 1.00948 g/l Na2CO3 0.998004 g/l KCl 0.777296 g/l KH2PO4 0.100948 g/l Na2S2O4 0.0499002 g/l NaHCO3 0.0499002 g/l MgSO4 x 7 H2O 0.0302843 g/l Nitrilotriacetic acid 0.0151421 g/l NaCl 0.0100948 g/l MnSO4 x H2O 0.00504738 g/l ZnSO4 x 7 H2O 0.00181706 g/l CoSO4 x 7 H2O 0.00181706 g/l FeSO4 x 7 H2O 0.00100948 g/l Sodium resazurin 0.000504738 g/l NiCl2 x 6 H2O 0.000302843 g/l AlK(SO4)2 x 12 H2O 0.000201895 g/l CuSO4 x 5 H2O 0.000100948 g/l H3BO3 0.000100948 g/l Na2MoO4 x 2 H2O 0.000100948 g/l Pyridoxine hydrochloride 9.98004e-05 g/l Nicotinic acid 4.99002e-05 g/l Calcium D-(+)-pantothenate 4.99002e-05 g/l p-Aminobenzoic acid 4.99002e-05 g/l (DL)-alpha-Lipoic acid 4.99002e-05 g/l Thiamine HCl 4.99002e-05 g/l Riboflavin 4.99002e-05 g/l Biotin 1.99601e-05 g/l Folic acid 1.99601e-05 g/l Na2WO4 x 2 H2O 4.0379e-06 g/l Na2SeO3 x 5 H2O 3.02843e-06 g/l Vitamin B12 9.98004e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
4626	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

4626

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
4626	marine sediment	San Diego Bay near Patella Creek	USA	USA	North America

Taxonmaps

69479

Global distribution of 16S sequence U28172 (>99% sequence identity) for Desulfuromonas palmitatis subclade from Microbeatlas

Aquatic Samples	287
Soil Samples	113
Animal Samples	36
Plant Samples	2
Total Samples	438

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
4626	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
4626	Desulfuromonas palmitatis 16S ribosomal RNA gene, partial sequence	U28172	1471		40982

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Characterization of citrate synthase from Geobacter sulfurreducens and evidence for a family of citrate synthases similar to those of eukaryotes throughout the Geobacteraceae.	Bond DR, Mester T, Nesbo CL, Izquierdo-Lopez AV, Collart FL, Lovley DR.	Appl Environ Microbiol	10.1128/aem.71.7.3858-3865.2005	2005
Metabolism	Reductive precipitation of gold by dissimilatory Fe(III)-reducing bacteria and archaea.	Kashefi K, Tor JM, Nevin KP, Lovley DR.	Appl Environ Microbiol	10.1128/aem.67.7.3275-3279.2001	2001
	Growth of geobacter sulfurreducens with acetate in syntrophic cooperation with hydrogen-oxidizing anaerobic partners	Cord-Ruwisch R, Lovley DR, Schink B.	Appl Environ Microbiol	10.1128/aem.64.6.2232-2236.1998	1998
Phylogeny	Geoalkalibacter subterraneus sp. nov., an anaerobic Fe(III)- and Mn(IV)-reducing bacterium from a petroleum reservoir, and emended descriptions of the family Desulfuromonadaceae and the genus Geoalkalibacter.	Greene AC, Patel BK, Yacob S	Int J Syst Evol Microbiol	10.1099/ijs.0.001537-0	2009
Phylogeny	Desulfuromonas palmitatis sp. nov., a marine dissimilatory Fe(III) reducer that can oxidize long-chain fatty acids.	Coates JD, Lonergan DJ, Philips EJ, Jenter H, Lovley DR	Arch Microbiol		1995

References

#4626	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 12391
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Desulfuromonas palmitatis (DSM 12391, ATCC 51701, SDBY1)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

Genome-based predictions

Literature

Literature

References

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