Hippea jasoniae (DSM 24585, OCM 985, Mar08-272r)

Name: Hippea jasoniae (DSM 24585, OCM 985, Mar08-272r)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 4187

Type strain

Strain Designation Mar08-272r

Culture col. no. DSM 24585 OCM 985 Mar08-272r

NCBI tax ID(s) 944479

Special Collections DSMZ Literature strains

History DSMZ <- A.-L. Reysenbach, Portland State Univ., USA; Mar08-272r <- Y. Liu {2009}

Links

Hippea jasoniae Mar08-272r is an anaerobe, Gram-negative, rod-shaped bacterium that was isolated from hydrothermal vent deposit, depth 1624 m.

Gram-negative rod-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 401734

DSM 24585

@ref 20215

Last LPSN update 2026-05-29 08:25:52

Domain Bacteria

Phylum Pseudomonadota

Class Deltaproteobacteria

Order Desulfurellales

Family Desulfurellaceae

Genus Hippea

Species Hippea jasoniae

Full scientific name Hippea jasoniae Flores et al. 2012

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape
30302	negative	2.75 µm	0.6 µm	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
17700	HIPPEA JASONIAE MEDIUM (DSMZ Medium 1360)		Medium recipe at MediaDive	Name: HIPPEA JASONIAE MEDIUM (DSMZ Medium 1360) Composition: NaCl 26.0435 g/l Sulfur 9.8912 g/l Trisodium citrate x 2 H2O 2.90801 g/l MgCl2 x 6 H2O 1.48368 g/l (NH4)2SO4 1.28586 g/l Na-acetate 1.2364 g/l Na2S x 9 H2O 0.49456 g/l Yeast extract 0.49456 g/l KCl 0.445104 g/l KH2PO4 0.276954 g/l MgSO4 x 7 H2O 0.24728 g/l CaCl2 x 2 H2O 0.0692384 g/l FeCl3 x 6 H2O 0.0197824 g/l Na2B4O7 x 10 H2O 0.00445104 g/l MnCl2 x 4 H2O 0.00178042 g/l Sodium resazurin 0.00049456 g/l ZnSO4 x 7 H2O 0.000217606 g/l Pyridoxine hydrochloride 9.8912e-05 g/l Nicotinic acid 4.9456e-05 g/l (DL)-alpha-Lipoic acid 4.9456e-05 g/l p-Aminobenzoic acid 4.9456e-05 g/l Riboflavin 4.9456e-05 g/l Thiamine HCl 4.9456e-05 g/l CuCl2 x 2 H2O 4.9456e-05 g/l Calcium D-(+)-pantothenate 4.9456e-05 g/l VOSO4 x 2 H2O 2.96736e-05 g/l Na2MoO4 x 2 H2O 2.96736e-05 g/l Folic acid 1.97824e-05 g/l Biotin 1.97824e-05 g/l CoSO4 x 7 H2O 9.8912e-06 g/l Vitamin B12 9.8912e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
17700	positive	growth	65
30302	positive	growth	40-72
30302	positive	optimum	62.5

Culture pH

@ref	Ability	Type	PH	PH range
30302	positive	optimum	4.75
30302	positive	growth	3.5-5	acidophile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
17700	anaerobe
30302	anaerobe
125439	obligate anaerobe	99.353

Spore formation

@ref	Spore formation	Confidence
125439		97.258

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30302	NaCl	positive	growth	1-6 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30302	30089 ChEBI	acetate	+	carbon source
30302	17272 ChEBI	propionate	+	carbon source
30302	30031 ChEBI	succinate	+	carbon source

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Hydrothermal vent
#Condition	#Thermophilic (>45°C)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
17700	hydrothermal vent deposit, depth 1624 m	Atlantic Ocean, Mid-Atlantic Ridge, Lucky Strike hydrothermal vent field	Portugal	PRT	Europe	37.2921	-32.2751 37.2921/-32.2751

Taxonmaps

69479

Global distribution of 16S sequence FR754498 (>99% sequence identity) for Hippea jasoniae subclade from Microbeatlas

Aquatic Samples	9
Soil Samples	2
Animal Samples	1
Plant Samples	0
Total Samples	12

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
17700	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM74443v1 assembly for Hippea jasoniae Mar08-272r	contig	GCA_000744435	944479.3	2582581238	944479	70.83

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
30302	Hippea sp. Mar08-368r partial 16S rRNA gene, strain Mar08-368r	FR754496	1609		944323
17700	Hippea jasoniae partial 16S rRNA gene, strain Mar08-272r	FR754498	1670		944479

GC content

@ref	GC-content (mol%)	Method
17700	35.6	thermal denaturation, midpoint method (Tm)
30302	35.6

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM74443v1 assembly for Hippea jasoniae Mar08-272r
NCBI: GCA_000744435

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	99.35	no
125439	gram_stain	BacteriaNetⓘ	negative	45.64	no
125439	motility	BacteriaNetⓘ	no	78.25	no
125439	spore_formation	BacteriaNetⓘ	no	97.26	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Hippea jasoniae sp. nov. and Hippea alviniae sp. nov., thermoacidophilic members of the class Deltaproteobacteria isolated from deep-sea hydrothermal vent deposits.	Flores GE, Hunter RC, Liu Y, Mets A, Schouten S, Reysenbach AL	Int J Syst Evol Microbiol	10.1099/ijs.0.033001-0	2011

References

#17700	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24585
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26643	IJSEM 1252 2012 ( DOI 10.1099/ijs.0.033001-0 , PubMed 21764980 )
#30302	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26643
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Hippea jasoniae (DSM 24585, OCM 985, Mar08-272r)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000744435

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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