Name: Solidesulfovibrio marrakechensis EMSSDQ4
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 4165

Type strain:

Species: Solidesulfovibrio marrakechensis

Strain Designation: EMSSDQ4

Culture col. no.: DSM 19337, ATCC BAA-1562

Strain history: <- A.-I. Qatibi; EMSSDQ4

NCBI tax ID(s): 436510 (species)

SI-ID 401883

DSM 19337

Special Collections

Section

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Solidesulfovibrio marrakechensis EMSSDQ4 is an anaerobe, mesophilic, Gram-negative bacterium that was isolated from olive mill wastewater taken from an aeration basin.

Gram-negative
rod-shaped
anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Desulfovibrionales*
	Family	*Desulfovibrionaceae*
	Genus	*Solidesulfovibrio*
	Species	**Solidesulfovibrio marrakechensis**
	Full Scientific Name (LPSN)	Solidesulfovibrio marrakechensis (Chamkh et al. 2009) Waite et al. 2020

Synonym

Desulfovibrio marrakechensis

Information on morphological and physiological properties Morphology

[Ref.: #23214]	Gram stain	negative

[Ref.: #23214]	Cell length	3.0-4.0 µm

[Ref.: #23214]	Cell width	1.3-1.6 µm

[Ref.: #23214]	Cell shape	rod-shaped

[Ref.: #23214]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8054]

Culture medium

SOLIDESULFOVIBRIO MARRAKECHENSIS MEDIUM (DSMZ Medium 1202)

[Ref.: #8054]

Culture medium growth

[Ref.: #8054]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #8054]	growth	37 °C
[Ref.: #23214]	growth	20-50 °C
[Ref.: #23214]	optimum	37 °C

	pH	Kind of pH		pH
[Ref.: #23214]			optimum	7.0
[Ref.: #23214]			growth	6.5-8.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8054]	Oxygen tolerance	anaerobe
[Ref.: #23214]	Oxygen tolerance	anaerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #23214]		NaCl		growth	0-35	g/L
[Ref.: #23214]		NaCl		optimum	0	g/L

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23214]	1,2-propandiol ChEBI	+	electron donor
[Ref.: #23214]	2,3-butanediol ChEBI	-	carbon source
[Ref.: #23214]	2-butanol ChEBI	-	carbon source
[Ref.: #23214]	2-propanol ChEBI	+	electron donor
[Ref.: #23214]	3-coumarate ChEBI	-	carbon source
[Ref.: #23214]	3-hydroxybenzoate ChEBI	-	carbon source
[Ref.: #23214]	3-O-methylgallate ChEBI	-	carbon source
[Ref.: #23214]	4-coumarate ChEBI	-	carbon source
[Ref.: #23214]	4-hydroxybenzoate ChEBI	-	carbon source
[Ref.: #23214]	4-hydroxyphenylacetic acid ChEBI	-	carbon source
[Ref.: #23214]	acetate ChEBI	-	carbon source
[Ref.: #23214]	alanine ChEBI	-	carbon source
[Ref.: #23214]	arginine ChEBI	-	carbon source
[Ref.: #23214]	benzoate ChEBI	-	carbon source
[Ref.: #23214]	butanol ChEBI	-	electron donor
[Ref.: #23214]	butyrate ChEBI	-	carbon source
[Ref.: #23214]	casamino acids	-	carbon source
[Ref.: #23214]	catechol ChEBI	-	carbon source
[Ref.: #23214]	choline ChEBI	-	carbon source
[Ref.: #23214]	cinnamate ChEBI	-	carbon source
[Ref.: #23214]	crotonate ChEBI	-	carbon source
[Ref.: #23214]	elemental sulfur ChEBI	+	electron acceptor
[Ref.: #23214]	ethylene glycol ChEBI	-	carbon source
[Ref.: #23214]	ethylene glycol ChEBI	-	electron donor
[Ref.: #23214]	ferulate ChEBI	-	carbon source
[Ref.: #23214]	fructose ChEBI	-	carbon source
[Ref.: #23214]	fructose ChEBI	-	electron donor
[Ref.: #23214]	fructose ChEBI	-	fermentation
[Ref.: #23214]	fumarate ChEBI	+	electron acceptor
[Ref.: #23214]	fumarate ChEBI	+	fermentation
[Ref.: #23214]	gallate ChEBI	-	carbon source
[Ref.: #23214]	glucose ChEBI	-	carbon source
[Ref.: #23214]	glycerol ChEBI	-	carbon source
[Ref.: #23214]	glycerol ChEBI	-	electron donor
[Ref.: #23214]	glycerol ChEBI	-	fermentation
[Ref.: #23214]	glycine ChEBI	-	carbon source
[Ref.: #23214]	lactate ChEBI	+	oxidation
[Ref.: #23214]	lactose ChEBI	-	carbon source
[Ref.: #23214]	lysine ChEBI	-	carbon source
[Ref.: #23214]	m-coumaric acid ChEBI	-	carbon source
[Ref.: #23214]	malate ChEBI	+	fermentation
[Ref.: #23214]	maltose ChEBI	-	carbon source
[Ref.: #23214]	mannose ChEBI	-	carbon source
[Ref.: #23214]	methanol ChEBI	-	carbon source
[Ref.: #23214]	methanol ChEBI	-	electron donor
[Ref.: #23214]	methyl p-anisate ChEBI	-	carbon source
[Ref.: #23214]	peptone	-	carbon source
[Ref.: #23214]	phenol ChEBI	-	carbon source
[Ref.: #23214]	propionate ChEBI	-	carbon source
[Ref.: #23214]	protocatechuate ChEBI	-	carbon source
[Ref.: #23214]	resorcinol ChEBI	-	carbon source
[Ref.: #23214]	ribose ChEBI	-	carbon source
[Ref.: #23214]	succinate ChEBI	-	electron donor
[Ref.: #23214]	sucrose ChEBI	-	carbon source
[Ref.: #23214]	syringate ChEBI	-	carbon source
[Ref.: #23214]	vanillate ChEBI	-	carbon source
[Ref.: #23214]	xylose ChEBI	-	carbon source
[Ref.: #23214]	yeast extract	-	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #23214]		catalase	+	1.11.1.6
[Ref.: #23214]		cytochrome oxidase	-	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8054]	Sample type/isolated from	olive mill wastewater taken from an aeration basin
[Ref.: #8054]	Geographic location (country and/or sea, region)	Marrakech
[Ref.: #8054]	Country	Morocco
[Ref.: #8054]	Country ISO 3 Code	MAR
[Ref.: #8054]	Continent	Africa

[Ref.: #23214]	Sample type/isolated from	aeration basin
[Ref.: #23214]	Geographic location (country and/or sea, region)	Marrakech
[Ref.: #23214]	Country	Morocco
[Ref.: #23214]	Country ISO 3 Code	MAR
[Ref.: #23214]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Engineered	#Waste	#Wastewater
#Engineered	#Built environment	#Container (Reservoir)
#Engineered	#Waste	#Industrial wastewater

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8054]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8054]	Desulfovibrio marrakechensis partial 16S rRNA gene, type strain DSM 19337T	AM947130	1539	GenBank ENA	436510 tax ID

[Ref.: #8054]

GC-content

65.1 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #8054]

Culture collection no.

DSM 19337, ATCC BAA-1562

[Ref.: #73667]

SI-ID 401883

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Desulfovibrio marrakechensis sp. nov., a 1,4-tyrosol-oxidizing, sulfate-reducing bacterium isolated from olive mill wastewater.	Chamkh F, Sproer C, Lemos PC, Besson S, El Asli AG, Bennisse R, Labat M, Reis M, Qatibi AI	Int J Syst Evol Microbiol	10.1099/ijs.0.003822-0	2009	*

References

#8054

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19337

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23214

Fatima Chamkh, Cathrin Spröer, Paulo Costa Lemos, Stephane Besson, Abdel-Ghani El Asli, Rhizlane Bennisse, Marc Labat, Maria Reis, Abdel-Illah Qatibi: Desulfovibrio marrakechensis sp. nov., a 1,4-tyrosol-oxidizing, sulfate-reducing bacterium isolated from olive mill wastewater. IJSEM 59: 936 - 942 2009 ( DOI 10.1099/ijs.0.003822-0 , PubMed 19406771 )

#73667

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID401883.1 )

* These data were automatically processed and therefore are not curated

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