Name: Alicyclobacillus acidocaldarius 104-IA
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 416

Type strain:

Species: Alicyclobacillus acidocaldarius

Strain Designation: 104-IA, 104-1A

Culture col. no.: CCUG 28521, NRRL B-14509, DSM 446, ATCC 27009, CIP 106131, IFO 15652, JCM 5260, NBRC 15652, NCIB 11725, BCRC 14685, CECT 4328, KCTC 1825, NCIMB 11725, IMET 11356

Strain history: CIP <- 1999, ATCC <- T.D. Brock: strain 104-1A

NCBI tax ID(s): 521098 (strain), 405212 (species)

SI-ID 1090

LMG 7119, ATCC 27009, IFO 15652, JCM 5260, NCIB 11725, CIP 106131, CCUG 28521, NRRL B-14509, IMET 11356, CCRC 14685, KCTC 1825, NCIMB 11725, LMD 89.167, CECT 4328, NBRC 15652, HAMBI 2071, HAMBI 2073, NCCB 89167, BCRC 14685, CCT 2490, DSM 446

Section

Alicyclobacillus acidocaldarius 104-IA is an aerobe, spore-forming, thermophilic bacterium that was isolated from acid hot spring.

Gram-positive
spore-forming
aerobe
thermophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Alicyclobacillaceae*
	Genus	*Alicyclobacillus*
	Species	**Alicyclobacillus acidocaldarius**
	Full Scientific Name (LPSN)	Alicyclobacillus acidocaldarius (Darland and Brock 1971) Wisotzkey et al. 1992

Synonym

Bacillus acidocaldarius

Information on morphological and physiological properties Morphology

[Ref.: #116015]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #116015]	Cell shape	rod-shaped

[Ref.: #116015]	Motility	no

[Ref.: #49268]

Incubation period

4 days

Multimedia content

[Ref.: #66793]

Caption:

electron microscopic image

[Ref.: #66793]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #211]

Culture medium

ALICYCLOBACILLUS MEDIUM (DSMZ Medium 402)

[Ref.: #211]

Culture medium growth

[Ref.: #211]

Culture medium link

Medium recipe at MediaDive

[Ref.: #211]

Culture medium composition

expand / minimize

[Ref.: #40298]

Culture medium

MEDIUM 317 - for Alicyclobacillus acidocaldarius

[Ref.: #40298]

Culture medium growth

[Ref.: #40298]

Culture medium composition

expand / minimize

[Ref.: #116015]

Culture medium

CIP Medium 317

[Ref.: #116015]

Culture medium growth

[Ref.: #116015]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #211]		growth	60 °C
[Ref.: #40298]		growth	55 °C
[Ref.: #49268]		growth	56 °C
[Ref.: #67770]		growth	60 °C
[Ref.: #116015]	no	growth	37 °C
[Ref.: #116015]	no	growth	25 °C
[Ref.: #116015]	no	growth	10 °C
[Ref.: #116015]		growth	45-55 °C
[Ref.: #116015]	no	growth	41 °C

[Ref.: #211]	Temperature range	thermophilic
[Ref.: #40298]	Temperature range	thermophilic
[Ref.: #49268]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	thermophilic
[Ref.: #116015]	Temperature range	mesophilic
[Ref.: #116015]	Temperature range	psychrophilic
[Ref.: #116015]	Temperature range	thermophilic
[Ref.: #69480]	Temperature range	thermophilic Confidence in %99.998

	pH	Kind of pH		pH
[Ref.: #116015]		no	growth	6

Information on physiology and metabolism Physiology and metabolism

[Ref.: #49268]

Oxygen tolerance

aerobe

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %98.115

[Ref.: #211]	Name of produced compound	amylase, thermoacidophilic
[Ref.: #211]	Name of produced compound	restriction endonuclease BacI (SacII)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	amygdalin ChEBI	-	fermentation	* from API 20E
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-glucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	D-glucose ChEBI	-	fermentation	* from API 20E
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	D-mannitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68371]	D-mannose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #116015]	esculin ChEBI	+	hydrolysis
[Ref.: #68371]	esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	L-arabinose ChEBI	-	fermentation	* from API 20E
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	L-rhamnose ChEBI	-	fermentation	* from API 20E
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #68371]	maltose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	melibiose ChEBI	-	fermentation	* from API 20E
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	myo-inositol ChEBI	-	fermentation	* from API 20E
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #116015]	nitrate ChEBI	-	reduction
[Ref.: #116015]	nitrite ChEBI	-	reduction
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	sorbitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	sucrose ChEBI	-	fermentation	* from API 20E
[Ref.: #68371]	trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #116015]	indole ChEBI	no
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #116015]	acetoin ChEBI	-
[Ref.: #116015]	glucose ChEBI		-
[Ref.: #68368]	acetoin ChEBI	+			* from API 20E
[Ref.: #68368]	indole ChEBI			-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #116015]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #116015]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym, API 20E
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #116015]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68368]	cytochrome oxidase	-	1.9.3.1	* from API 20E
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #116015]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #116015]	gelatinase	-
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #116015]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #116015]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #116015]	oxidase	-
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #116015]	urease	-	3.5.1.5
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #49268]	5555	+	-	-	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #49268]	2979	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #116015]	9275	-	-	+	+	-	+	+	-	+	-	+	+	+	+	-	+	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #211]	Sample type/isolated from	acid hot spring
[Ref.: #211]	Country	USA
[Ref.: #211]	Country ISO 3 Code	USA
[Ref.: #211]	Continent	North America

[Ref.: #49268]	Sample type/isolated from	Acid hot spring
[Ref.: #49268]	Country	USA
[Ref.: #49268]	Country ISO 3 Code	USA
[Ref.: #49268]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Acid hot spring
[Ref.: #67770]	Geographic location (country and/or sea, region)	Nymph Creek, Yellowstone National Park, WY
[Ref.: #67770]	Country	USA
[Ref.: #67770]	Country ISO 3 Code	USA
[Ref.: #67770]	Continent	North America

[Ref.: #116015]	Sample type/isolated from	Environment, Acid hot spring
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Thermal spring
#Condition	#Acidic	-
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB271754 (>99% sequence identity) for Alicyclobacillus acidocaldarius subclade from Microbeatlas

Aquatic Samples	244
Soil Samples	488
Animal Samples	1218
Plant Samples	275
Total Samples	2225

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #211]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #116015]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Alicyclobacillus acidocaldarius 16S rRNA gene, strain DSM 446	AJ496806	1507	ENA	521098 tax ID	*
[Ref.: #20218]	Alicyclobacillus acidocaldarius gene for 16S rRNA, partial sequence	AB271754	1463	ENA	405212 tax ID	*
[Ref.: #20218]	Alicyclobacillus acidocaldarius subsp. acidocaldarius gene for 16S rRNA, partial sequence	AB006917	262	ENA	521098 tax ID	*
[Ref.: #20218]	B.acidocaldarius 16S rRNA	X60742	1548	ENA	521098 tax ID	*
[Ref.: #20218]	Alicyclobacillus acidocaldarius subsp. acidocaldarius gene for 16S rRNA, strain: ATCC 27009	AB042056	1520	ENA	521098 tax ID	*
[Ref.: #20218]	Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 isolate Aac1 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EU723605	347	ENA	521098 tax ID	*
[Ref.: #20218]	Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 isolate Aac2 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EU723606	346	ENA	521098 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446	GCA_000024285	complete	GenBank	521098 tax ID	*
[Ref.: #66792]	Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446	521098.32	plasmid	PATRIC	521098 tax ID	*
[Ref.: #66792]	Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446	521098.31	plasmid	PATRIC	521098 tax ID	*
[Ref.: #66792]	Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446	521098.5	complete	PATRIC	521098 tax ID	*
[Ref.: #66792]	Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446	521098.30	plasmid	PATRIC	521098 tax ID	*
[Ref.: #66792]	Alicyclobacillus acidocaldarius acidocaldarius 104-IA, DSM 446	644736325	complete	JGI IMG/M	521098 tax ID	*

[Ref.: #211]	GC-content	62.3 mol%	Buoyant density centrifugation (BD)
[Ref.: #211]	GC-content	60.3 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	62.2 mol%	Buoyant density centrifugation (BD)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 DSM 446 NCBI: GCA_000024285.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 DSM 446 NCBI: GCA_000024285.1
[Ref.: #69480]	motile	yes	76.705	no
[Ref.: #69480]	flagellated	no	72.442	no
[Ref.: #69480]	gram-positive	yes	80.055	no
[Ref.: #69480]	anaerobic	no	98.289	no
[Ref.: #69480]	aerobic	yes	89.824	yes
[Ref.: #69480]	halophile	no	92.572	no
[Ref.: #69480]	spore-forming	yes	95.054	no
[Ref.: #69480]	thermophile	yes	99.999	yes
[Ref.: #69480]	glucose-util	yes	87.676	no
[Ref.: #69480]	glucose-ferment	no	91.569	yes

Availability in culture collections External links

[Ref.: #211]

Culture collection no.

CCUG 28521, NRRL B-14509, DSM 446, ATCC 27009, CIP 106131, IFO 15652, JCM 5260, NBRC 15652, NCIB 11725, BCRC 14685, CECT 4328, KCTC 1825, NCIMB 11725, IMET 11356

[Ref.: #70096]

SI-ID 1090

Literature:

Only first 10 entries are displayed. Click here to see all.

	Title	Authors	Journal	DOI	Year
Genetics	Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA).	Mavromatis K, Sikorski J, Lapidus A, Glavina Del Rio T, Copeland A, Tice H, Cheng JF, Lucas S, Chen F, Nolan M, Bruce D, Goodwin L, Pitluck S, Ivanova N, Ovchinnikova G, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Chain P, Meincke L, Sims D, Chertkov O, Han C, Brettin T, Detter JC, Wahrenburg C, Rohde M, Pukall R, Goker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Klenk HP, Kyrpides NC	Stand Genomic Sci	10.4056/sigs.591104	2010	*
Enzymology	A novel thermoacidophilic cellulase from Alicyclobacillus acidocaldarius.	Morana A, Esposito A, Maurelli L, Ruggiero G, Ionata E, Rossi M, La Cara F	Protein Pept Lett	10.2174/092986608785849209	2008	*
Enzymology	Heterologous expression of a gene encoding a thermostable beta-galactosidase from Alicyclobacillus acidocaldarius.	Yuan T, Yang P, Wang Y, Meng K, Luo H, Zhang W, Wu N, Fan Y, Yao B	Biotechnol Lett	10.1007/s10529-007-9551-y	2007	*
Enzymology	Characterization of a beta-glycosidase from the thermoacidophilic bacterium Alicyclobacillus acidocaldarius.	Di Lauro B, Rossi M, Moracci M	Extremophiles	10.1007/s00792-005-0500-1	2006	*
Phylogeny	Reclassification of 'Sulfobacillus thermosulfidooxidans subsp. thermotolerans' strain K1 as Alicyclobacillus tolerans sp. nov. and Sulfobacillus disulfidooxidans Dufresne et al. 1996 as Alicyclobacillus disulfidooxidans comb. nov., and emended description of the genus Alicyclobacillus.	Karavaiko GI, Bogdanova TI, Tourova TP, Kondrat'eva TF, Tsaplina IA, Egorova MA, Krasil'nikova EN, Zakharchuk LM	Int J Syst Evol Microbiol	10.1099/ijs.0.63300-0	2005	*
Enzymology	Gene cloning, sequencing, and characterization of a family 9 endoglucanase (CelA) with an unusual pattern of activity from the thermoacidophile Alicyclobacillus acidocaldarius ATCC27009.	Eckert K, Zielinski F, Lo Leggio L, Schneider E	Appl Microbiol Biotechnol	10.1007/s00253-002-1131-4	2002	*
Phylogeny	Identification of thermoacidophilic bacteria and a new Alicyclobacillus genomic species isolated from acidic environments in Japan.	Goto K, Tanimoto Y, Tamura T, Mochida K, Arai D, Asahara M, Suzuki M, Tanaka H, Inagaki K	Extremophiles	10.1007/s00792-001-0262-3	2002	*
Enzymology	Gene cloning, nucleotide sequence and biochemical properties of a cytoplasmic cyclomaltodextrinase (neopullulanase) from Alicyclobacillus acidocaldarius, reclassification of a group of enzymes.	Matzke J, Herrmann A, Schneider E, Bakker EP	FEMS Microbiol Lett	10.1111/j.1574-6968.2000.tb08933.x	2000	*
Enzymology	Acidostable and acidophilic proteins: the example of the alpha-amylase from Alicyclobacillus acidocaldarius.	Matzke J, Schwermann B, Bakker EP	Comp Biochem Physiol A Physiol	10.1016/s0300-9629(97)00008-x	1997	*
Stress	Biochemical identification of a lipoprotein with maltose-binding activity in the thermoacidophilic Gram-positive bacterium Alicyclobacillus acidocaldarius.	Herrmann A, Schlosser A, Schmid R, Schneider E	Res Microbiol	10.1016/s0923-2508(97)85120-0	1996	*
Enzymology	Purification, properties and structural aspects of a thermoacidophilic alpha-amylase from Alicyclobacillus acidocaldarius atcc 27009. Insight into acidostability of proteins.	Schwermann B, Pfau K, Liliensiek B, Schleyer M, Fischer T, Bakker EP	Eur J Biochem	10.1111/j.1432-1033.1994.00981.x	1994	*
	Glycoside hydrolase gene transcription by Alicyclobacillus acidocaldarius during growth on wheat arabinoxylan and monosaccharides: a proposed xylan hydrolysis mechanism.	Lee BD, Apel WA, Sheridan PP, DeVeaux LC	Biotechnol Biofuels	10.1186/s13068-018-1110-3	2018	*

References

#211	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 446

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#40298 ; Curators of the CIP;
#49268 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 28521

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66793

Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#70096

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID1090.1 )

#116015 Collection of Institut Pasteur ; Curators of the CIP; CIP 106131
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Alicyclobacillus acidocaldarius subsp. acidocaldarius in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 DSM 446

Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 DSM 446

Change proposal

Change proposal