Cite this strain

"Salidesulfovibrio brasiliensis" (DSM 15816, JCM 12178, LVform1)

BacDive ID 4146

Type strain

Strain Designation LVform1

Culture col. no. DSM 15816 JCM 12178 LVform1

NCBI tax ID(s) 221711

Special Collections DSMZ JCM

Links

"Salidesulfovibrio brasiliensis" LVform1 is an anaerobe, mesophilic prokaryote that was isolated from hypersaline anoxic sediment.

anaerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 231862

JCM 12178,DSM 15816

@ref 20215

Last LPSN update 2025-12-16 09:47:44

Domain Pseudomonadati

Phylum Thermodesulfobacteriota

Class Desulfovibrionia

Order Desulfovibrionales

Family Desulfovibrionaceae

Genus "Salidesulfovibrio"

Species "Salidesulfovibrio brasiliensis"

Full scientific name Salidesulfovibrio brasiliensis Park et al. 2022

Synonyms (2)

"Pseudodesulfovibrio brasiliensis"
"Desulfovibrio brasiliensis"

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	95.324
125439	negative	96.8

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
6120	DESULFOBACTER SP. MEDIUM (LACTATE) (DSMZ Medium 195c)		Medium recipe at MediaDive	Name: DESULFOBACTER SP. MEDIUM (LACTATE) (DSMZ Medium 195c) Composition: NaCl 20.9372 g/l Na2SO4 2.99103 g/l MgCl2 x 6 H2O 2.99103 g/l Na-L-lactate 2.49252 g/l Na2CO3 1.49551 g/l KCl 0.498504 g/l Na2S x 9 H2O 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
6120	positive	growth	30	mesophilic
67770	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
6120	anaerobe
125439	anaerobe	97.6

Spore formation

@ref	Spore formation	Confidence
125439		99.3

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Sediment
#Condition	#Anoxic (anaerobic)	-
#Condition	#Saline	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
6120	hypersaline anoxic sediment	Lagoa Vermelha	Brazil	BRA	Middle and South America
67770	Sediments of a hypersaline coastal lagoon	Lagoa Vermelha, Rio de Janeiro	Brazil	BRA	Middle and South America

Taxonmaps

69479

Global distribution of 16S sequence AJ544687 (>99% sequence identity) for Desulfovibrio brasiliensis subclade from Microbeatlas

Aquatic Samples	65
Soil Samples	11
Animal Samples	20
Plant Samples	1
Total Samples	97

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM131182v1 assembly for Salidesulfovibrio brasiliensis JCM 12178	contig	GCA_001311825	1294020.3	2728369698	1294020	29.6

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
6120	Desulfovibrio brasiliensis 16S rRNA gene, type strain LVform1T	AJ544687	1503		221711

GC content

6120

GC-content (mol%)56.3

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Salidesulfovibrio brasiliensis JCM 12178
NCBI: GCA_001311825

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.30	no
125439	motility	BacteriaNetⓘ	yes	64.80	no
125439	gram_stain	BacteriaNetⓘ	negative	96.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	97.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Desulfovibrio brasiliensis JCM 12178
PATRIC: 1294020.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	95.32	no
125438	anaerobic	anaerobicⓘ	yes	87.67	yes
125438	spore-forming	spore-formingⓘ	no	88.44	no
125438	aerobic	aerobicⓘ	no	92.56	no
125438	thermophilic	thermophileⓘ	no	92.64	yes
125438	flagellated	motile2+ⓘ	yes	79.67	no

Literature

References

#6120	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15816
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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