Desulfovibrio magneticus RS-1 | Type strain | DSM 13731, JCM 12223

Strain identifier

BacDive ID: 4140

Type strain:

Species: Desulfovibrio magneticus

Strain Designation: RS-1

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #5132]	Domain	Bacteria
[Ref.: #5132]	Phylum	Proteobacteria
[Ref.: #5132]	Class	Deltaproteobacteria
[Ref.: #5132]	Order	Desulfovibrionales
[Ref.: #5132]	Family	Desulfovibrionaceae
[Ref.: #5132]	Genus	Desulfovibrio
[Ref.: #5132]	Species	Desulfovibrio magneticus
[Ref.: #5132]	Full Scientific Name	Desulfovibrio magneticus Sakaguchi et al. 2002
[Ref.: #5132]	Strain Designation	RS-1
[Ref.: #5132]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
	Last PNU update	25-03-2019 (DD-MM-YYYY)
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Proteobacteria
[Ref.: #20215]	Class	Deltaproteobacteria		Int. J. Syst. Evol. Microbiol. 56:1
[Ref.: #20215]	Family	Desulfovibrionaceae
[Ref.: #20215]	Genus	Desulfovibrio	genus (AL)	Int. J. Syst. Bacteriol. 30:225
[Ref.: #20215]	Species	Desulfovibrio magneticus	sp. nov. (VP)	Int. J. Syst. Evol. Microbiol. 52:215*
[Ref.: #20215]	Full Scientific Name	Desulfovibrio magneticus Sakaguchi et al. 2002

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #5132]

Oxygen tolerance

anaerobe

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #5132]

Culture medium

DESULFOVIBRIO MAGNETICUS MEDIUM (DSMZ Medium 896), 30°C, anaerobic

[Ref.: #5132]

Culture medium growth

[Ref.: #5132]

Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #5132]			growth	30 ̊C

[Ref.: #5132]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #5132]

Sample type/isolated from

freshwater sulfide-rich mud

[Ref.: #5132]

Geographic location (country and/or sea, region)

Wakayama

[Ref.: #5132]

Country

Japan

[Ref.: #5132]

Continent

Asia

Isolation sources categories

#Environmental	#Aquatic	#Freshwater
#Environmental	#Aquatic	#Mud (Sludge)
#Condition	#Sulfuric	-

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #5132]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #5132]

GC-content

65.8 mol%

high performance liquid chromatography (HPLC)

Sequence information:

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #5132]	DDBJ EMBL Direct submission	Desulfovibrio magneticus gene for 16S rRNA	D43944	1540	573370
[Ref.: #5132]	DDBJ Genome project data	Desulfovibrio magneticus RS-1 plasmid pDMC2 DNA, complete genome	AP010906	8867	573370
[Ref.: #5132]	DDBJ Genome project data	Desulfovibrio magneticus RS-1 plasmid pDMC1 DNA, complete genome	AP010905	58704	573370
[Ref.: #5132]	DDBJ Genome project data	Desulfovibrio magneticus RS-1 DNA, complete genome	AP010904	5248049	573370

Availability in culture collectionsStrain availability

[Ref.: #5132]

Culture collection no.

DSM 13731, JCM 12223

[Ref.: #5132]

Strain history

<- T. Matsunaga, Tokyo University of Agriculture and Technology, Japan; RS-1 <- T. Sakaguchi and T. Matsunaga {1993}

[Ref.: #20218]

Associated Passport(s) in StrainInfo

163803, 401032

References

#5132

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13731

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

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