Name: Desulfobaculum senezii CVL
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 4136

Type strain:

Species: Desulfobaculum senezii

Strain Designation: CVL

Culture col. no.: DSM 8436, JCM 16814

Strain history: DSM 8436 <-- J.-L. Garcia strain CVL.

NCBI tax ID(s): 76007 (species)

SI-ID 48480

DSM 8436, JCM 16814

Other strains from Desulfobaculum senezii

D. senezii CVH2, DSM 8437

Section

Desulfobaculum senezii CVL is an anaerobe, mesophilic bacterium that was isolated from solar saltern.

anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Desulfovibrionales*
	Family	*Desulfovibrionaceae*
	Genus	*Desulfobaculum*
	Species	**Desulfobaculum senezii**
	Full Scientific Name (LPSN)	Desulfobaculum senezii (Tsu et al. 1999) Galushko and Kuever 2021

Synonym

Desulfovibrio senezii

Information on culture and growth conditions Culture and growth conditions

[Ref.: #3282]

Culture medium

HALODESULFOVIBRIO (POSTGATE) MEDIUM (DSMZ Medium 163)

[Ref.: #3282]

Culture medium growth

[Ref.: #3282]

Culture medium link

Medium recipe at MediaDive

[Ref.: #3282]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #3282]			growth	37 °C
[Ref.: #67770]			growth	37 °C

[Ref.: #3282]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #3282]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #3282]	Sample type/isolated from	solar saltern
[Ref.: #3282]	Geographic location (country and/or sea, region)	California
[Ref.: #3282]	Country	USA
[Ref.: #3282]	Country ISO 3 Code	USA
[Ref.: #3282]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Solar saltern of Chula Vista
[Ref.: #67770]	Geographic location (country and/or sea, region)	San Diego area, CA
[Ref.: #67770]	Country	USA
[Ref.: #67770]	Country ISO 3 Code	USA
[Ref.: #67770]	Continent	North America
* marker position based on {}

Isolation sources categories

#Condition

#Saline

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF050100 (>99% sequence identity) for Desulfovibrio senezii subclade from Microbeatlas

Aquatic Samples	347
Soil Samples	18
Animal Samples	38
Plant Samples	5
Total Samples	408

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #3282]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #3282]	Desulfovibrio senezii 16S ribosomal RNA gene, partial sequence	AF050100	1541	ENA	76007 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Desulfovibrio senezii DSM 8436	2574179788	draft	JGI IMG/M	1121463 tax ID	*

[Ref.: #3282]

GC-content

62 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #3282]

Culture collection no.

DSM 8436, JCM 16814

[Ref.: #73639]

SI-ID 48480

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Isolation and characterization of desulfovibrio senezii sp. nov., A halotolerant sulfate reducer from a solar saltern and phylogenetic confirmation of desulfovibrio fructosovorans as a new species	Tsu I I, Huang C, Garcia J, Patel BKC, Cayol JL, Baresi L, Mah RA	Arch Microbiol	10.1007/s002030050648	1998	*

References

#3282

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 8436

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#73639

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID48480.1 )

* These data were automatically processed and therefore are not curated

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