Strain identifier

BacDive ID: 4073

Type strain: Yes

Species: Desulfovibrio desulfuricans

Strain Designation: Essex 6

Culture col. no.: DSM 642, ATCC 29577, NCIMB 8307, VKM B-1799, CCUG 34226, CIP 107039

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Desulfovibrio desulfuricans Essex 6 is an anaerobe, mesophilic bacterium that was isolated from tar and sand mix around corroded gas main.

  1. anaerobe
  2. mesophilic
  3. 16S sequence
  4. Bacteria
  5. genome sequence
  • Information on morphological and physiological propertiesMorphology and physiologyarrow_down
  • Fatty acid profile
    Type of FA analysis whole cell analysis
    Incubation medium
    Agar/liquid
    Incubation temperature (°C)
    Incubation time (d)
    Incubation pH
    Incubation oxygen condition
    Treatment/condition
    Software version
    Library/peak naming table
    System
    Instrument
    Method/protocol CCUG
    Cutoff value
    Reference [Ref.: #51996]
    Fatty acidarrow to sort Percentagearrow to sort ECLarrow to sort
    C14:0 0.4 14
    C15:0 1.1 15
    C16:0 9.9 16
    C17:0 0.7 17
    C18:0 0.4 18
    C14:0 ISO 3OH 8.8 15.117
    C15:0 ANTEISO 1.1 14.711
    C15:0 ISO 25.2 14.621
    C15:1 ISO F 0.8 14.414
    C15:1 ω5c 1.4 14.904
    C16:1 ISO H 0.4 15.461
    C16:1 ω7c 2.5 15.819
    C17:0 CYCLO 3.7 16.888
    C17:0 iso 4.1 16.629
    C17:0 iso 3OH 0.4 18.161
    C17:1 ISO I/C16:0 DMA 2.9 16.481
    C17:1 ω8c 0.3 16.792
    C17:1 ω9c ISO 27.5 16.416
    C18:1 ω9c 0.5 17.769
    C18:2 ω6,9c/C18:0 ANTE 4.6 17.724
    Unidentified 0.5 15.399
    Unidentified 0.3 16.288
    Unidentified 0.7 17.103
    unknown 13.566 1.4 13.566
    unknown 14.966 0.4 14.966

    [Ref.: #342] Oxygen tolerance anaerobe
    [Ref.: #51996] Oxygen tolerance anaerobe
  • Information on genomic background e.g. entries in nucleic sequence databassMolecular biologyarrow_down
  • [Ref.: #342] GC-content 57.4 mol%   sequence analysis
    Sequence information: Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries.
    Sequence databasearrow to sort Sequence accession descriptionarrow to sort Sequence accession numberarrow to sort Sequence typearrow to sort Sequence length (bp)arrow to sort Associated NCBI tax IDarrow to sort
    [Ref.: #342] whole genome shotgun sequence, Marker Gene (EMBL Direct submission) Desulfovibrio desulfuricans DSM 642, whole genome shotgun sequencing project NZ_ATUZ00000000 3391683 1121445 tax ID
    [Ref.: #20218] Marker Gene (GenBank Direct submission) Desulfovibrio desulfuricans hmc operon, partial sequence AF127653 1601 115117 tax ID *
    [Ref.: #20218] Marker Gene (GenBank Direct submission) Desulfovibrio desulfuricans subsp. desulfuricans strain Essex 6 16S ribosomal RNA gene, complete sequence AF192153 16S 1542 115117 tax ID *
    [Ref.: #20218] Marker Gene (GenBank Direct submission) Desulfovibrio desulfuricans subsp. desulfuricans apr operon, complete sequence AF226708 3057 115117 tax ID *
    [Ref.: #20218] Marker Gene (GenBank Direct submission) Desulfovibrio desulfuricans dissimilatory sulfite reductase alpha subunit (dsrA) and dissimilatory sulfite reductase beta subunit (dsrB) genes, partial cds AF273034 1898 115117 tax ID *

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