Desulfocastanea catecholica (DSM 3882, JCM 39068, NZva20)

Name: Desulfocastanea catecholica (DSM 3882, JCM 39068, NZva20)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 3966

Type strain

Strain Designation NZva20

Culture col. no. DSM 3882 JCM 39068 NZva20

NCBI tax ID(s) 90729

Special Collections DSMZ JCM

Links

Desulfocastanea catecholica NZva20 is an anaerobe, mesophilic prokaryote that was isolated from anoxic mud.

anaerobe mesophilic 16S sequence

Name and taxonomic classification

SI-ID 47771

JCM 39068,DSM 3882,ATCC 43955

@ref 20215

Last LPSN update 2025-12-16 09:47:41

Domain Pseudomonadati

Phylum Thermodesulfobacteriota

Class Desulfobulbia

Order Desulfobulbales

Family Desulfocapsaceae

Genus Desulfocastanea

Species Desulfocastanea catecholica

Full scientific name Desulfocastanea catecholica (Szewzyk and Pfennig 1988) Galushko and Kuever 2021

Synonyms (1)

Desulfobacterium catecholicum

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
1500	DESULFOCASTAENA MEDIUM (DSMZ Medium 385)		Medium recipe at MediaDive	Name: DESULFOCASTAENA MEDIUM (DSMZ Medium 385) Composition: NaCl 6.97906 g/l Na2SO4 2.99103 g/l MgCl2 x 6 H2O 1.29612 g/l Na2CO3 0.997009 g/l KCl 0.498504 g/l Na-benzoate 0.398804 g/l Na2S x 9 H2O 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l Pyrocatechol 0.0598205 g/l FeCl2 x 4 H2O 0.00149551 g/l Sodium resazurin 0.000498504 g/l NaOH 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Folic acid 1.99402e-05 g/l Biotin 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water HCl

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
1500	positive	growth	28	mesophilic
67770	positive	growth	28	mesophilic

Physiology and metabolism

Oxygen tolerance

1500

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Mud (Sludge)
#Condition	#Anoxic (anaerobic)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
1500	anoxic mud	Delaware Bay	New Zealand	NZL	Australia and Oceania
67770	Delaware Bay	north-east of Nelson	New Zealand	NZL	Australia and Oceania

Taxonmaps

69479

Global distribution of 16S sequence AJ237602 (>99% sequence identity) for [Desulfobacterium] catecholicum subclade from Microbeatlas

Aquatic Samples	46
Soil Samples	4
Animal Samples	1
Plant Samples
Total Samples	51

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
1500	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
1500	Desulfobacterium catecholicum 16S rRNA gene, partial, strain DSM 3882	AJ237602	1501		90729

GC content

@ref	GC-content (mol%)
1500	52.4
67770	52.4

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Desulfoprunum benzoelyticum gen. nov., sp. nov., a Gram-stain-negative, benzoate-degrading, sulfate-reducing bacterium isolated from a wastewater treatment plant.	Junghare M, Schink B	Int J Syst Evol Microbiol	10.1099/ijs.0.066761-0	2014
Phylogeny	Desulfopila aestuarii gen. nov., sp. nov., a Gram-negative, rod-like, sulfate-reducing bacterium isolated from an estuarine sediment in Japan.	Suzuki D, Ueki A, Amaishi A, Ueki K	Int J Syst Evol Microbiol	10.1099/ijs.0.64600-0	2007

References

#1500	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 3882
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Desulfocastanea catecholica (DSM 3882, JCM 39068, NZva20)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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