Deinococcus radiodurans (CCUG 27074, DSM 20539, ATCC 13939)

Name: Deinococcus radiodurans (CCUG 27074, DSM 20539, ATCC 13939)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 3852

Type strain

Strain Designation R1, R₁

Culture col. no. CCUG 27074 DSM 20539 ATCC 13939 CCM 1700 JCM 16871 11 more

NCBI tax ID(s) 243230 1299

Special Collections DSMZ CCUG JCM CIP

History <- CCM <- R.G.E. Murray <- A.W. Anderson, R₁ DSM 20539 <-- CCM 1700 <-- R. G. E. Murray <-- A. W. Anderson R₁. CIP <- 1996, ATCC <- A.W. Anderson: strain R1 (smooth), Micrococcus radiodurans

Links

Deinococcus radiodurans R1 is an obligate aerobe, mesophilic, Gram-positive prokaryote that was isolated from irradiated ground pork and beef.

Gram-positive coccus-shaped obligate aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 2154

LMG 4051,ATCC 13939,CCM 1700,DSM 20539,IMET 10603,NCIB 9279,NCTC 14682,CCUG 27074,CIP 104750,NCIMB 9279,IFO15346,VKM B-1422,CCRC 12827,CECT 833,NBRC 15346,HAMBI 1924,BCRC 12827,JCM 16871

@ref 20215

Last LPSN update 2026-02-09 11:18:35

Domain Bacteria

Phylum Deinococcota

Class Deinococci

Order Deinococcales

Family Deinococcaceae

Genus Deinococcus

Species Deinococcus radiodurans

Full scientific name Deinococcus radiodurans (ex Raj et al. 1960) Brooks and Murray 1981

BacDive ID	Other strains from **Deinococcus radiodurans** (10)	Type strain
3853	D. radiodurans Anderson U1, U1, DSM 46620, CCM 1701, IMET ...
100117	D. radiodurans STI07259(IMET),
154264	D. radiodurans CCUG 52921
154265	D. radiodurans CCUG 52922
154618	D. radiodurans CCUG 54603
154624	D. radiodurans CCUG 54616
154645	D. radiodurans CCUG 54733
154678	D. radiodurans CCUG 54820
155082	D. radiodurans CCUG 56416
155083	D. radiodurans CCUG 56417

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
122123	positive	coccus-shaped
125439	negative			92.7

Colony morphology

Multimedia

@ref:	66793
multimedia content:	EM_DSM_20539_1.jpg
multimedia.multimedia content:	EM_DSM_20539_1.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

@ref:	66793
multimedia content:	EM_DSM_20539_2.jpg
multimedia.multimedia content:	EM_DSM_20539_2.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

@ref:	66793
multimedia content:	EM_DSM_20539_3.jpg
multimedia.multimedia content:	EM_DSM_20539_3.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

@ref:	66793
multimedia content:	EM_DSM_20539_4.jpg
multimedia.multimedia content:	EM_DSM_20539_4.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

@ref:	66793
multimedia content:	EM_DSM_20539_5.jpg
multimedia.multimedia content:	EM_DSM_20539_5.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8768	CORYNEBACTERIUM AGAR (DSMZ Medium 53)	Medium recipe at MediaDive	Name: CORYNEBACTERIUM AGAR (DSMZ Medium 53) Composition: Agar 15.0 g/l Casein peptone 10.0 g/l NaCl 5.0 g/l Glucose 5.0 g/l Yeast extract 5.0 g/l Distilled water
37966	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
122123	CIP Medium 3	Medium recipe at CIP
122123	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
8768	positive	growth	30	mesophilic
37966	positive	growth	30	mesophilic
67770	positive	growth	30	mesophilic
122123	positive	growth	15-30
122123	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
122123	obligate aerobe
125439	obligate aerobe	97.4

Spore formation

@ref	Spore formation	Confidence
125439		93.8

Compound production

8768

Compoundrestriction endonuclease MraI

Halophily

@ref	Salt	Growth	Tested relation	Concentration
122123	NaCl	positive	growth	0 %
122123	NaCl		growth	2 %
122123	NaCl		growth	4 %
122123	NaCl		growth	6 %
122123	NaCl		growth	8 %
122123	NaCl		growth	10 %

Murein

@ref	Murein short key	Type
8768	A21.01	A3ß L-Orn-Gly₂_-₃

Observation

67770

Observationquinones: MK-8, a trace of MK-7

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	-	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
122123	17632 ChEBI	nitrate	-	reduction
122123	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
122123	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
122123	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
122123	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
122123	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
122123	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
122123	caseinase	+	3.4.21.50
122123	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
122123	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
122123	gelatinase	+
122123	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
122123	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
122123	ornithine decarboxylase	-	4.1.1.17
122123	oxidase	+
122123	protease	-
68382	trypsin	-	3.4.21.4	from API zym
122123	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
122123	-	+	+	+	-	+	-	+	-	+	+	-	-	-	-	+	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
8768	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
122123	not determinedn.d.	-	+	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Meat
#Host	#Mammals	#Bovinae (Cow, Cattle)
#Host	#Mammals	#Suidae (Pig,Swine)

Isolation

@ref	Sample type
8768	irradiated ground pork and beef
48649	Irradiated ground pork and beef
67770	Irradiated ground pork and beef
122123	Food, Irradiated ground pork and beef

Taxonmaps

69479

Global distribution of 16S sequence Y11332 (>99% sequence identity) for Deinococcus radiodurans subclade from Microbeatlas

Aquatic Samples	639
Soil Samples	213
Animal Samples	3917
Plant Samples	212
Total Samples	4981

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8768	1	Risk group (German classification) According to TRBA 466
122123	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM163882v1 assembly for Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	complete	GCA_001638825		2687453506	243230	97.98
124043	KDR13939K_1.0 assembly for Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	complete	GCA_045277105			243230	97.94
66792	ASM2054668v1 assembly for Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	complete	GCA_020546685	1408434.14	8002986603	243230	97.8
66792	ASM2137829v1 assembly for Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	complete	GCA_021378295	243230.110	8002993038	243230	97.41
66792	ASM2054670v1 assembly for Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 ATCC 13939 substr. S1	complete	GCA_020546705	1408434.13	8002983398	1408434	96.66
66792	ASM2054708v1 assembly for Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 ATCC 13939 substr. R6	complete	GCA_020547085	1408434.17	8002999489	1408434	96.65
66792	Deinococcus radiodurans ATCC 13939	complete		1408434.25		1408434	96.59
66792	Deinococcus radiodurans ATCC 13939	complete		1408434.19		1408434	96.59
66792	ASM2054680v1 assembly for Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 ATCC 13939 substr. R1	complete	GCA_020546805	1408434.15	8002989857	1408434	96.49
66792	ASM2054702v1 assembly for Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 ATCC 13939 substr. R2	complete	GCA_020547025	1408434.16	8002996314	1408434	96.38
66792	ASM2054678v1 assembly for Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 ATCC 13939 substr. S2	complete	GCA_020546785	1408434.18	8003007057	1408434	96.31
66792	Deinococcus radiodurans ATCC 13939	complete		1408434.30		1408434	95.85
66792	Deinococcus radiodurans ATCC 13939	complete		1408434.24		1408434	95.85
66792	Deinococcus radiodurans ATCC 13939	complete		1408434.26		1408434	95.6
66792	Deinococcus radiodurans ATCC 13939	complete		1408434.20		1408434	95.6
66792	Deinococcus radiodurans ATCC 13939	complete		1408434.28		1408434	95.21
66792	Deinococcus radiodurans ATCC 13939	complete		1408434.22		1408434	95.21
66792	Deinococcus radiodurans ATCC 13939	complete		1408434.27		1408434	95.11
66792	Deinococcus radiodurans ATCC 13939	complete		1408434.21		1408434	95.11
66792	ASM856v1 assembly for Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	complete	GCA_000008565	243230.17	637000092	243230	95.05
66792	Deinococcus radiodurans ATCC 13939	complete		1408434.29		1408434	94.96
66792	Deinococcus radiodurans ATCC 13939	complete		1408434.23		1408434	94.96
67770	ASM68789v1 assembly for Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	contig	GCA_000687895	1408434.3	2556921628	243230	67.91
67770	ASM68598v1 assembly for Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	contig	GCA_000685985	1121384.3	2563366733	243230	65.51

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
8768	D.radiodurans 16S rRNA gene	Y11332	1466		1299

GC content

@ref	GC-content (mol%)	Method
8768	67.0
67770	67	thermal denaturation, midpoint method (Tm)
67770	69	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539
NCBI: GCA_000008565

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	97.40	no
125439	gram_stain	BacteriaNetⓘ	negative	92.70	no
125439	motility	BacteriaNetⓘ	yes	60.90	no
125439	spore_formation	BacteriaNetⓘ	no	93.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Deinococcus radiodurans ATCC 13939 ATCC 13939 substr. S1
NCBI: GCA_020546705.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	60.51	no
125438	anaerobic	anaerobicⓘ	no	93.32	yes
125438	aerobic	aerobicⓘ	yes	79.18	yes
125438	spore-forming	spore-formingⓘ	no	71.13	no
125438	thermophilic	thermophileⓘ	no	88.29	yes
125438	flagellated	motile2+ⓘ	no	74.12	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Novel transaminases from thermophiles: from discovery to application.	Cardenas-Fernandez M, Sinclair O, Ward JM.	Microb Biotechnol	10.1111/1751-7915.13940	2022
	Isolation and characterization of multiple-stress tolerant bacteria from radon springs.	Timkina E, Kulisova M, Palyzova A, Maresova H, Matatkova O, Rezanka T, Kolouchova IJ.	PLoS One	10.1371/journal.pone.0299532	2024
	Data on a thermostable enzymatic one-pot reaction for the production of a high-value compound from l-arabinose.	Bawn M, Subrizi F, Lye GJ, Sheppard TD, Hailes HC, Ward JM.	Data Brief	10.1016/j.dib.2018.05.140	2018
Biotechnology	Deinococcus as new chassis for industrial biotechnology: biology, physiology and tools.	Gerber E, Bernard R, Castang S, Chabot N, Coze F, Dreux-Zigha A, Hauser E, Hivin P, Joseph P, Lazarelli C, Letellier G, Olive J, Leonetti JP.	J Appl Microbiol	10.1111/jam.12808	2015
	The Convergence of the Hedgehog/Intein Fold in Different Protein Splicing Mechanisms.	Beyer HM, Virtanen SI, Aranko AS, Mikula KM, Lountos GT, Wlodawer A, Ollila OHS, Iwai H.	Int J Mol Sci	10.3390/ijms21218367	2020
	Antibacterial Efficacy of Cold-Sprayed Copper Coatings against Gram-Positive Staphylococcus aureus and Gram-Negative Escherichia coli.	Hutasoit N, Topa SH, Javed MA, Rahman Rashid RA, Palombo E, Palanisamy S.	Materials (Basel)	10.3390/ma14226744	2021
Metabolism	Conservation and diversity of the IrrE/DdrO-controlled radiation response in radiation-resistant Deinococcus bacteria.	Blanchard L, Guerin P, Roche D, Cruveiller S, Pignol D, Vallenet D, Armengaud J, de Groot A.	Microbiologyopen	10.1002/mbo3.477	2017
Enzymology	Evaluation of procedures for the collection, processing, and analysis of biomolecules from low-biomass surfaces.	Kwan K, Cooper M, La Duc MT, Vaishampayan P, Stam C, Benardini JN, Scalzi G, Moissl-Eichinger C, Venkateswaran K.	Appl Environ Microbiol	10.1128/aem.02978-10	2011
Metabolism	Identification and characterization of a novel bacterial sulfite oxidase with no heme binding domain from Deinococcus radiodurans.	D'Errico G, Di Salle A, La Cara F, Rossi M, Cannio R.	J Bacteriol	10.1128/jb.188.2.694-701.2006	2006
	A novel chromatography system to isolate active ribosomes from pathogenic bacteria.	Maguire BA, Wondrack LM, Contillo LG, Xu Z.	RNA	10.1261/rna.692408	2008
Pathogenicity	Bacterial killing by dry metallic copper surfaces.	Espirito Santo C, Lam EW, Elowsky CG, Quaranta D, Domaille DW, Chang CJ, Grass G.	Appl Environ Microbiol	10.1128/aem.01599-10	2011
Genetics	Evaluation of 16S rDNA-based community profiling for human microbiome research.	Jumpstart Consortium Human Microbiome Project Data Generation Working Group.	PLoS One	10.1371/journal.pone.0039315	2012
Genetics	Comparative genomics of Deinococcus radiodurans: unveiling genetic discrepancies between ATCC 13939K and BAA-816 strains.	Jeong S, Singh H, Jung JH, Jung KW, Ryu S, Lim S.	Front Microbiol	10.3389/fmicb.2024.1410024	2024
	Deinoxanthin-Enriched Extracellular Vesicles from Deinococcus radiodurans Drive IL-10-Dependent Tolerogenic Programming of Dendritic Cells.	Han JM, Lim J, Kim WS, Yoo BG, Jung JH, Lim S, Byun EB.	Antioxidants (Basel)	10.3390/antiox14091108	2025
Genetics	Structural switches: intracellular G-quadruplexes modulate DNA repair and genome maintenance in Deinococcus radiodurans.	Tewari H, Mishra S, Kota S.	mBio	10.1128/mbio.01639-25	2025
Genetics	Effects of simulated space environmental conditions on cleanroom microbes.	Cassilly CD, Chander AM, Vaughn JA, Kunstman KJ, Green SJ, Venkateswaran K, Bertone PF, Bahr CW, Marcella SA, Morris HC.	Front Microbiol	10.3389/fmicb.2025.1600106	2025
Genetics	Structural Differences between the Genomes of Deinococcus radiodurans Strains from Different Laboratories.	Zahradka K, Zahradka D, Repar J.	Genes (Basel)	10.3390/genes15070847	2024
	Radiation-Resistant Bacteria Deinococcus radiodurans-Derived Extracellular Vesicles as Potential Radioprotectors.	Han JM, Mwiti G, Yeom SJ, Lim J, Kim WS, Lim S, Lim ST, Byun EB.	Adv Healthc Mater	10.1002/adhm.202403192	2025
	Active plasma sterilizer for planetary protection and contamination control for space missions.	Roy S, Kosky J, Revazishvili T, Roy S, Brown S, Vichnyakov V, Rurua N, Mastro EN, Kobaidze D.	Sci Rep	10.1038/s41598-024-82556-8	2024
	Surviving the storm: exploring the role of natural transformation in nutrition and DNA repair of stressed Deinococcus radiodurans.	Sharma DK, Soni I, Rajpurohit YS.	Appl Environ Microbiol	10.1128/aem.01371-24	2025
	Combining live fluorescence imaging with in situ cryoelectron tomography sheds light on the septation process in Deinococcus radiodurans.	Gaifas L, Kleman JP, Lacroix F, Schexnaydre E, Trouve J, Morlot C, Sandblad L, Gutsche I, Timmins J.	Proc Natl Acad Sci U S A	10.1073/pnas.2425047122	2025
	cAMP-independent DNA binding of the CRP family protein DdrI from Deinococcus radiodurans.	Wang Y, Hu J, Gao X, Cao Y, Ye S, Chen C, Wang L, Xu H, Guo M, Zhang D, Zhou R, Hua Y, Zhao Y.	mBio	10.1128/mbio.01144-24	2024
	Quantitative morphological analysis of Deinococcus radiodurans elucidates complex dose-dependent nucleoid condensation during recovery from ionizing radiation.	Cordova A, Niese B, Sweet P, Kamat P, Phillip JM, Gordon V, Contreras LM.	Appl Environ Microbiol	10.1128/aem.00108-24	2024
	Enhanced chaotrope tolerance and (S)-2-hydroxypropiophenone production by recombinant Pseudomonas putida engineered with Pprl from Deinococcus radiodurans.	Kordesedehi R, Shahpiri A, Asadollahi MA, Biria D, Nikel PI.	Microb Biotechnol	10.1111/1751-7915.14448	2024
	A novel ionizing radiation-induced small RNA, DrsS, promotes the detoxification of reactive oxygen species in Deinococcus radiodurans.	Rai SN, Dutta T.	Appl Environ Microbiol	10.1128/aem.01538-23	2024
Genetics	Raiding nature's genetic toolbox for UV-C resistance by functional metagenomics.	Roberts Kingman GA, Kipness JL, Rothschild LJ.	Sci Rep	10.1038/s41598-024-83952-w	2025
	The Effects of Freeze-Thaw and UVC Radiation on Microbial Survivability in a Selected Mars-like Environment.	Keaney D, Lucey B, Quinn N, Finn K.	Microorganisms	10.3390/microorganisms10030576	2022
	Deinococcus radiodurans-derived membrane vesicles protect HaCaT cells against H₂O₂-induced oxidative stress via modulation of MAPK and Nrf2/ARE pathways.	Han JM, Song HY, Jung JH, Lim S, Seo HS, Kim WS, Lim ST, Byun EB.	Biol Proced Online	10.1186/s12575-023-00211-4	2023
	Structural characterization and functional insights into the type II secretion system of the poly-extremophile Deinococcus radiodurans.	Farci D, Milenkovic S, Iesu L, Tanas M, Ceccarelli M, Piano D.	J Biol Chem	10.1016/j.jbc.2023.105537	2024
	Insights into the role of three Endonuclease III enzymes for oxidative stress resistance in the extremely radiation resistant bacterium Deinococcus radiodurans.	Rollo F, Martins GD, Gouveia AG, Ithurbide S, Servant P, Romao CV, Moe E.	Front Microbiol	10.3389/fmicb.2023.1266785	2023
	Natural transformation-specific DprA coordinate DNA double-strand break repair pathways in heavily irradiated D. radiodurans.	Sharma DK, Soni I, Misra HS, Rajpurohit YS.	Appl Environ Microbiol	10.1128/aem.01948-23	2024
	Characterization of cold-active trehalose synthase from Pseudarthrobacter sp. for trehalose bioproduction.	Trakarnpaiboon S, Bunterngsook B, Lekakarn H, Prongjit D, Champreda V.	Bioresour Bioprocess	10.1186/s40643-023-00681-0	2023
	Molecular characterization of the PhiKo endolysin from Thermus thermophilus HB27 bacteriophage phiKo and its cryptic lytic peptide RAP-29.	Szadkowska M, Kocot AM, Sowik D, Wyrzykowski D, Jankowska E, Kozlowski LP, Makowska J, Plotka M.	Front Microbiol	10.3389/fmicb.2023.1303794	2023
Genetics	DivIVA Phosphorylation Affects Its Dynamics and Cell Cycle in Radioresistant Deinococcus radiodurans.	Chaudhary R, Kota S, Misra HS.	Microbiol Spectr	10.1128/spectrum.03141-22	2023
	A multidomain connector links the outer membrane and cell wall in phylogenetically deep-branching bacteria.	von Kugelgen A, van Dorst S, Alva V, Bharat TAM.	Proc Natl Acad Sci U S A	10.1073/pnas.2203156119	2022
Metabolism	DivIVA Regulates Its Expression and the Orientation of New Septum Growth in Deinococcus radiodurans.	Chaudhary R, Kota S, Misra HS.	J Bacteriol	10.1128/jb.00163-21	2021
	Lack of the Bacterial Phytochrome Protein Decreases Deinococcus radiodurans Resistance to Mitomycin C.	Jung JH, Jeong S, Im S, Kim MK, Seo HS, Lim S.	Front Microbiol	10.3389/fmicb.2021.659233	2021
Transcriptome	Deinococcus radiodurans UWO298 Dependence on Background Radiation for Optimal Growth.	Castillo H, Li X, Smith GB.	Front Genet	10.3389/fgene.2021.644292	2021
	The SDBC is active in quenching oxidative conditions and bridges the cell envelope layers in Deinococcus radiodurans.	Farci D, Graca AT, Iesu L, de Sanctis D, Piano D.	J Biol Chem	10.1016/j.jbc.2022.102784	2023
	The cryo-EM structure of the S-layer deinoxanthin-binding complex of Deinococcus radiodurans informs properties of its environmental interactions.	Farci D, Haniewicz P, de Sanctis D, Iesu L, Kereiche S, Winterhalter M, Piano D.	J Biol Chem	10.1016/j.jbc.2022.102031	2022
	Characterization of DNA Processing Protein A (DprA) of the Radiation-Resistant Bacterium Deinococcus radiodurans.	Sharma DK, Misra HS, Soni I, Rajpurohit YS.	Microbiol Spectr	10.1128/spectrum.03470-22	2022
	PNPase and RhlB Interact and Reduce the Cellular Availability of Oxidized RNA in Deinococcus radiodurans.	Han R, Jiang J, Fang J, Contreras LM.	Microbiol Spectr	10.1128/spectrum.02140-22	2022
	Stress-induced nucleoid remodeling in Deinococcus radiodurans is associated with major changes in Heat Unstable (HU) protein dynamics.	Vauclare P, Wulffele J, Lacroix F, Servant P, Confalonieri F, Kleman JP, Bourgeois D, Timmins J.	Nucleic Acids Res	10.1093/nar/gkae379	2024
	Molecular repertoire of Deinococcus radiodurans after 1 year of exposure outside the International Space Station within the Tanpopo mission.	Ott E, Kawaguchi Y, Kolbl D, Rabbow E, Rettberg P, Mora M, Moissl-Eichinger C, Weckwerth W, Yamagishi A, Milojevic T.	Microbiome	10.1186/s40168-020-00927-5	2020
	Characterization of gross genome rearrangements in Deinococcus radiodurans recA mutants.	Repar J, Zahradka D, Sovic I, Zahradka K.	Sci Rep	10.1038/s41598-021-89173-9	2021
	RNA-Binding Domain is Necessary for PprM Function in Response to the Extreme Environmental Stress in Deinococcus radiodurans.	Li W, Ma Y, Yang J, Xiao F, Wang W, He S.	Indian J Microbiol	10.1007/s12088-017-0684-y	2017
	Signal Recognition Particle RNA Contributes to Oxidative Stress Response in Deinococcus radiodurans by Modulating Catalase Localization.	Han R, Fang J, Jiang J, Gaidamakova EK, Tkavc R, Daly MJ, Contreras LM.	Front Microbiol	10.3389/fmicb.2020.613571	2020
	UV surface disinfection in a wearable drug delivery device.	Zrehen A, Hili U, Weil N, Ben-David O, Yosef A, Eitan B.	Biomed Opt Express	10.1364/boe.453270	2022
Metabolism	Dynamic Polyphosphate Metabolism Coordinating with Manganese Ions Defends against Oxidative Stress in the Extreme Bacterium Deinococcus radiodurans.	Dai S, Xie Z, Wang B, Yu N, Zhao J, Zhou Y, Hua Y, Tian B.	Appl Environ Microbiol	10.1128/aem.02785-20	2021
	Extremophiles: the species that evolve and survive under hostile conditions.	Rekadwad BN, Li WJ, Gonzalez JM, Punchappady Devasya R, Ananthapadmanabha Bhagwath A, Urana R, Parwez K.	3 Biotech	10.1007/s13205-023-03733-6	2023
	The Role of Iron and Copper on the Oligomerization Dynamics of DR_2577, the Main S-Layer Protein of Deinococcus radiodurans.	Farci D, Guadalupi G, Bierla K, Lobinski R, Piano D.	Front Microbiol	10.3389/fmicb.2019.01450	2019
	Characterization of the DdrD protein from the extremely radioresistant bacterium Deinococcus radiodurans.	de la Tour CB, Mathieu M, Servant P, Coste G, Norais C, Confalonieri F.	Extremophiles	10.1007/s00792-021-01233-0	2021
Metabolism	Novel Lytic Enzyme of Prophage Origin from Clostridium botulinum E3 Strain Alaska E43 with Bactericidal Activity against Clostridial Cells.	Morzywolek A, Plotka M, Kaczorowska AK, Szadkowska M, Kozlowski LP, Wyrzykowski D, Makowska J, Waters JJ, Swift SM, Donovan DM, Kaczorowski T.	Int J Mol Sci	10.3390/ijms22179536	2021
	Natural Transformation in Deinococcus radiodurans: A Genetic Analysis Reveals the Major Roles of DprA, DdrB, RecA, RecF, and RecO Proteins.	Ithurbide S, Coste G, Lisboa J, Eugenie N, Bentchikou E, Bouthier de la Tour C, Liger D, Confalonieri F, Sommer S, Quevillon-Cheruel S, Servant P.	Front Microbiol	10.3389/fmicb.2020.01253	2020
Metabolism	Molecular response of Deinococcus radiodurans to simulated microgravity explored by proteometabolomic approach.	Ott E, Fuchs FM, Moeller R, Hemmersbach R, Kawaguchi Y, Yamagishi A, Weckwerth W, Milojevic T.	Sci Rep	10.1038/s41598-019-54742-6	2019
	Structural insights into the main S-layer unit of Deinococcus radiodurans reveal a massive protein complex with porin-like features.	Farci D, Aksoyoglu MA, Farci SF, Bafna JA, Bodrenko I, Ceccarelli M, Kirkpatrick J, Winterhalter M, Kereiche S, Piano D.	J Biol Chem	10.1074/jbc.ra119.012174	2020
Metabolism	A Novel Trehalose Synthase for the Production of Trehalose and Trehalulose.	Agarwal N, Singh SP.	Microbiol Spectr	10.1128/spectrum.01333-21	2021
	Guanine Quadruplex DNA Regulates Gamma Radiation Response of Genome Functions in the Radioresistant Bacterium Deinococcus radiodurans.	Mishra S, Chaudhary R, Singh S, Kota S, Misra HS.	J Bacteriol	10.1128/jb.00154-19	2019
Enzymology	The N253F mutant structure of trehalose synthase from Deinococcus radiodurans reveals an open active-site topology.	Chow SY, Wang YL, Hsieh YC, Lee GC, Liaw SH.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x17014303	2017
Metabolism	Phosphorylation of FtsZ and FtsA by a DNA Damage-Responsive Ser/Thr Protein Kinase Affects Their Functional Interactions in Deinococcus radiodurans.	Maurya GK, Modi K, Banerjee M, Chaudhary R, Rajpurohit YS, Misra HS.	mSphere	10.1128/msphere.00325-18	2018
	PprA Protein Inhibits DNA Strand Exchange and ATP Hydrolysis of Deinococcus RecA and Regulates the Recombination in Gamma-Irradiated Cells.	Rajpurohit YS, Sharma DK, Misra HS.	Front Cell Dev Biol	10.3389/fcell.2021.636178	2021
	DNA Damage and Survival Time Course of Deinococcal Cell Pellets During 3 Years of Exposure to Outer Space.	Kawaguchi Y, Shibuya M, Kinoshita I, Yatabe J, Narumi I, Shibata H, Hayashi R, Fujiwara D, Murano Y, Hashimoto H, Imai E, Kodaira S, Uchihori Y, Nakagawa K, Mita H, Yokobori SI, Yamagishi A.	Front Microbiol	10.3389/fmicb.2020.02050	2020
Metabolism	FrnE, a cadmium-inducible protein in Deinococcus radiodurans, is characterized as a disulfide isomerase chaperone in vitro and for its role in oxidative stress tolerance in vivo.	Khairnar NP, Joe MH, Misra HS, Lim SY, Kim DH.	J Bacteriol	10.1128/jb.01503-12	2013
Metabolism	DdrI, a cAMP Receptor Protein Family Member, Acts as a Major Regulator for Adaptation of Deinococcus radiodurans to Various Stresses.	Meyer L, Coste G, Sommer S, Oberto J, Confalonieri F, Servant P, Pasternak C.	J Bacteriol	10.1128/jb.00129-18	2018
Pathogenicity	A comparison between ultraviolet disinfection and copper alginate beads within a vortex bioreactor for the deactivation of bacteria in simulated waste streams with high levels of colour, humic acid and suspended solids.	Thomas SF, Rooks P, Rudin F, Atkinson S, Goddard P, Bransgrove RM, Mason PT, Allen MJ.	PLoS One	10.1371/journal.pone.0115688	2014
Enzymology	A Genome-Wide Search for Ionizing-Radiation-Responsive Elements in Deinococcus radiodurans Reveals a Regulatory Role for the DNA Gyrase Subunit A Gene's 5' Untranslated Region in the Radiation and Desiccation Response.	Villa JK, Amador P, Janovsky J, Bhuyan A, Saldanha R, Lamkin TJ, Contreras LM.	Appl Environ Microbiol	10.1128/aem.00039-17	2017
	DNA Damage Protection for Enhanced Bacterial Survival Under Simulated Low Earth Orbit Environmental Conditions in Escherichia coli.	Puig J, Knodlseder N, Quera J, Algara M, Guell M.	Front Microbiol	10.3389/fmicb.2021.789668	2021
Metabolism	Proteometabolomic response of Deinococcus radiodurans exposed to UVC and vacuum conditions: Initial studies prior to the Tanpopo space mission.	Ott E, Kawaguchi Y, Kolbl D, Chaturvedi P, Nakagawa K, Yamagishi A, Weckwerth W, Milojevic T.	PLoS One	10.1371/journal.pone.0189381	2017
	Purification and characterization of DR_2577 (SlpA) a major S-layer protein from Deinococcus radiodurans.	Farci D, Bowler MW, Esposito F, McSweeney S, Tramontano E, Piano D.	Front Microbiol	10.3389/fmicb.2015.00414	2015
	Transcriptional analysis of Deinococcus radiodurans reveals novel small RNAs that are differentially expressed under ionizing radiation.	Tsai CH, Liao R, Chou B, Contreras LM.	Appl Environ Microbiol	10.1128/aem.03709-14	2015
	The S-layer Protein DR_2577 Binds Deinoxanthin and under Desiccation Conditions Protects against UV-Radiation in Deinococcus radiodurans.	Farci D, Slavov C, Tramontano E, Piano D.	Front Microbiol	10.3389/fmicb.2016.00155	2016
Metabolism	Imposed Environmental Stresses Facilitate Cell-Free Nanoparticle Formation by Deinococcus radiodurans.	Chen A, Contreras LM, Keitz BK.	Appl Environ Microbiol	10.1128/aem.00798-17	2017
Metabolism	Cell morphology and nucleoid dynamics in dividing Deinococcus radiodurans.	Floc'h K, Lacroix F, Servant P, Wong YS, Kleman JP, Bourgeois D, Timmins J.	Nat Commun	10.1038/s41467-019-11725-5	2019
	Versatile biotechnological applications of amylosucrase, a novel glucosyltransferase.	Seo DH, Yoo SH, Choi SJ, Kim YR, Park CS.	Food Sci Biotechnol	10.1007/s10068-019-00686-6	2020
	The Deinococcus protease PprI senses DNA damage by directly interacting with single-stranded DNA.	Lu H, Chen Z, Xie T, Zhong S, Suo S, Song S, Wang L, Xu H, Tian B, Zhao Y, Zhou R, Hua Y.	Nat Commun	10.1038/s41467-024-46208-9	2024
	Abundance and survival of microbial aerosols in the troposphere and stratosphere.	Bryan NC, Christner BC, Guzik TG, Granger DJ, Stewart MF.	ISME J	10.1038/s41396-019-0474-0	2019
Metabolism	In vivo and in vitro characterization of DdrC, a DNA damage response protein in Deinococcus radiodurans bacterium.	Bouthier de la Tour C, Mathieu M, Meyer L, Dupaigne P, Passot F, Servant P, Sommer S, Le Cam E, Confalonieri F.	PLoS One	10.1371/journal.pone.0177751	2017
	Antibiotic hyper-resistance in a class I aminoacyl-tRNA synthetase with altered active site signature motif.	Brkic A, Leibundgut M, Jablonska J, Zanki V, Car Z, Petrovic Perokovic V, Marsavelski A, Ban N, Gruic-Sovulj I.	Nat Commun	10.1038/s41467-023-41244-3	2023
	Enhancing Bioremediation Potential of Pseudomonas putida by Developing Its Acid Stress Tolerance With Glutamate Decarboxylase Dependent System and Global Regulator of Extreme Radiation Resistance.	Zhou Z, Liu Y, Zanaroli G, Wang Z, Xu P, Tang H.	Front Microbiol	10.3389/fmicb.2019.02033	2019
Enzymology	Purification, crystallization and preliminary X-ray diffraction analysis of DNA damage response A protein from Deinococcus radiodurans.	Yamada M, Satoh K, Narumi I.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309110040224	2010
	Single Strand Annealing Plays a Major Role in RecA-Independent Recombination between Repeated Sequences in the Radioresistant Deinococcus radiodurans Bacterium.	Ithurbide S, Bentchikou E, Coste G, Bost B, Servant P, Sommer S.	PLoS Genet	10.1371/journal.pgen.1005636	2015
Metabolism	A major role of the RecFOR pathway in DNA double-strand-break repair through ESDSA in Deinococcus radiodurans.	Bentchikou E, Servant P, Coste G, Sommer S.	PLoS Genet	10.1371/journal.pgen.1000774	2010
Metabolism	DR1769, a protein with N-terminal beta propeller repeats and a low-complexity hydrophilic tail, plays a role in desiccation tolerance of Deinococcus radiodurans.	Rajpurohit YS, Misra HS.	J Bacteriol	10.1128/jb.00418-13	2013
Metabolism	The Deinococcus radiodurans DR1245 protein, a DdrB partner homologous to YbjN proteins and reminiscent of type III secretion system chaperones.	Norais C, Servant P, Bouthier-de-la-Tour C, Coureux PD, Ithurbide S, Vannier F, Guerin PP, Dulberger CL, Satyshur KA, Keck JL, Armengaud J, Cox MM, Sommer S.	PLoS One	10.1371/journal.pone.0056558	2013
	Irradiation-induced Deinococcus radiodurans genome fragmentation triggers transposition of a single resident insertion sequence.	Pasternak C, Ton-Hoang B, Coste G, Bailone A, Chandler M, Sommer S.	PLoS Genet	10.1371/journal.pgen.1000799	2010
	Identification of new genes contributing to the extreme radioresistance of Deinococcus radiodurans using a Tn5-based transposon mutant library.	Dulermo R, Onodera T, Coste G, Passot F, Dutertre M, Porteron M, Confalonieri F, Sommer S, Pasternak C.	PLoS One	10.1371/journal.pone.0124358	2015
Metabolism	A Mur regulator protein in the extremophilic bacterium Deinococcus radiodurans.	Ul Hussain Shah AM, Zhao Y, Wang Y, Yan G, Zhang Q, Wang L, Tian B, Chen H, Hua Y.	PLoS One	10.1371/journal.pone.0106341	2014
Enzymology	Expression, purification and preliminary X-ray crystallographic analysis of UDP-galactopyranose mutase from Deinococcus radiodurans.	Karunan Partha S, Bonderoff SA, van Straaten KE, Sanders DA.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309109027754	2009
	Expression and mutational analysis of DinB-like protein DR0053 in Deinococcus radiodurans.	Appukuttan D, Seo HS, Jeong S, Im S, Joe M, Song D, Choi J, Lim S.	PLoS One	10.1371/journal.pone.0118275	2015
Metabolism	Repression of recA induction by RecX is independent of the RecA protein in Deinococcus radiodurans.	Sheng D, Li M, Jiao J, Sheng X, Deng W, Hua Y.	J Bacteriol	10.1128/jb.00175-10	2010
Enzymology	Extracellular dGMP enhances Deinococcus radiodurans tolerance to oxidative stress.	Li M, Sun H, Feng Q, Lu H, Zhao Y, Zhang H, Xu X, Jiao J, Wang L, Hua Y.	PLoS One	10.1371/journal.pone.0054420	2013
Metabolism	Functional characterization of the role of the chromosome I partitioning system in genome segregation in Deinococcus radiodurans.	Charaka VK, Misra HS.	J Bacteriol	10.1128/jb.00610-12	2012
	PprA Protein Is Involved in Chromosome Segregation via Its Physical and Functional Interaction with DNA Gyrase in Irradiated Deinococcus radiodurans Bacteria.	Devigne A, Guerin P, Lisboa J, Quevillon-Cheruel S, Armengaud J, Sommer S, Bouthier de la Tour C, Servant P.	mSphere	10.1128/msphere.00036-15	2016
Metabolism	Gamma radiation-induced proteome of Deinococcus radiodurans primarily targets DNA repair and oxidative stress alleviation.	Basu B, Apte SK.	Mol Cell Proteomics	10.1074/mcp.m111.011734	2012
Genetics	Identification and characterization of a novel trehalose synthase gene derived from saline-alkali soil metagenomes.	Jiang L, Lin M, Zhang Y, Li Y, Xu X, Li S, He Huang.	PLoS One	10.1371/journal.pone.0077437	2013
	Large-Scale Molecular Evolutionary Analysis Uncovers a Variety of Polynucleotide Kinase Clp1 Family Proteins in the Three Domains of Life.	Saito M, Sato A, Nagata S, Tamaki S, Tomita M, Suzuki H, Kanai A.	Genome Biol Evol	10.1093/gbe/evz195	2019
	Protein damage and death by radiation in Escherichia coli and Deinococcus radiodurans.	Krisko A, Radman M.	Proc Natl Acad Sci U S A	10.1073/pnas.1009312107	2010
	RecO is essential for DNA damage repair in Deinococcus radiodurans.	Xu G, Wang L, Chen H, Lu H, Ying N, Tian B, Hua Y.	J Bacteriol	10.1128/jb.01851-07	2008
Phylogeny	Exploration of Deinococcus-Thermus molecular diversity by novel group-specific PCR primers.	Theodorakopoulos N, Bachar D, Christen R, Alain K, Chapon V.	Microbiologyopen	10.1002/mbo3.119	2013
	The single-stranded DNA-binding protein of Deinococcus radiodurans.	Eggington JM, Haruta N, Wood EA, Cox MM.	BMC Microbiol	10.1186/1471-2180-4-2	2004
	Additive effects of SbcCD and PolX deficiencies in the in vivo repair of DNA double-strand breaks in Deinococcus radiodurans.	Bentchikou E, Servant P, Coste G, Sommer S.	J Bacteriol	10.1128/jb.00452-07	2007
Enzymology	Novel highly thermostable endolysin from Thermus scotoductus MAT2119 bacteriophage Ph2119 with amino acid sequence similarity to eukaryotic peptidoglycan recognition proteins.	Plotka M, Kaczorowska AK, Stefanska A, Morzywolek A, Fridjonsson OH, Dunin-Horkawicz S, Kozlowski L, Hreggvidsson GO, Kristjansson JK, Dabrowski S, Bujnicki JM, Kaczorowski T.	Appl Environ Microbiol	10.1128/aem.03074-13	2014
	Integrity of proteins in human saliva after sterilization by gamma irradiation.	Ruhl S, Berlenbach P, Langenfelder S, Horl D, Lehn N, Hiller KA, Schmalz G, Durchschlag H.	Appl Environ Microbiol	10.1128/aem.01374-10	2011
Enzymology	Biochemical Characterization and Validation of a Catalytic Site of a Highly Thermostable Ts2631 Endolysin from the Thermus scotoductus Phage vB_Tsc2631.	Plotka M, Kaczorowska AK, Morzywolek A, Makowska J, Kozlowski LP, Thorisdottir A, Skirnisdottir S, Hjorleifsdottir S, Fridjonsson OH, Hreggvidsson GO, Kristjansson JK, Dabrowski S, Bujnicki JM, Kaczorowski T.	PLoS One	10.1371/journal.pone.0137374	2015
Enzymology	Genetic evidence that the uvsE gene product of Deinococcus radiodurans R1 is a UV damage endonuclease.	Earl AM, Rankin SK, Kim KP, Lamendola ON, Battista JR.	J Bacteriol	10.1128/jb.184.4.1003-1009.2002	2002
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Metabolism	Deinococcus radiodurans PprI switches on DNA damage response and cellular survival networks after radiation damage.	Lu H, Gao G, Xu G, Fan L, Yin L, Shen B, Hua Y.	Mol Cell Proteomics	10.1074/mcp.m800123-mcp200	2009
Metabolism	The IrrE protein of Deinococcus radiodurans R1 is a novel regulator of recA expression.	Earl AM, Mohundro MM, Mian IS, Battista JR.	J Bacteriol	10.1128/jb.184.22.6216-6224.2002	2002
Metabolism	Isolation and characterization of a novel lysine racemase from a soil metagenomic library.	Chen IC, Lin WD, Hsu SK, Thiruvengadam V, Hsu WH.	Appl Environ Microbiol	10.1128/aem.00074-09	2009
Metabolism	The deinococcal DdrB protein is involved in an early step of DNA double strand break repair and in plasmid transformation through its single-strand annealing activity.	Bouthier de la Tour C, Boisnard S, Norais C, Toueille M, Bentchikou E, Vannier F, Cox MM, Sommer S, Servant P.	DNA Repair (Amst)	10.1016/j.dnarep.2011.09.010	2011
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Genetics	Establishing a Standardized Genetic Toolkit for the Radiation-Resistant Extremophile Deinococcus radiodurans.	Simmons TR, Cordova A, Grismore KB, Moline LC, Stankes AC, Johnson J, Bok C, Contreras LM.	ACS Synth Biol	10.1021/acssynbio.5c00409	2025
Genetics	Involvement of Int_Tn916 Type Tyrosine Recombinase in Nucleoid Structure in Deinococcus radiodurans.	Mishra S, Tewari H, Rajaram H, Kota S.	J Basic Microbiol	10.1002/jobm.70101	2025
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	Heterologous expression of DRB0118 gene from Deinococcus radiodurans confers abiotic stress tolerance in soybean.	Zang K, Zhou L, Wang P, Guo W, Su X, Afridi M, Wang J, Guo H, Cheng H.	Plant Biol (Stuttg)	10.1111/plb.70111	2025
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	Susceptibility of microbes to far-UVC light (222 nm) on spacecraft and cleanroom surfaces.	Petersen C, Urbano J, Hinzer A, Shuryak I, Wang E, Hashmi R, Guan L, Buonanno M, Welch D.	Microbiol Spectr	10.1128/spectrum.02276-25	2025
	The near-infrared bacteriophytochrome-derived fluorescent protein PENELOPE enables RESOLFT superresolution microscopy.	Stumpf D, Jensen N, Mittelheisser C, Keller-Findeisen J, Chizhik AI, Kamper M, Diekmann T, Habenstein F, Jansen I, Enderlein J, Sliwa M, Inamdar K, Hell SW, Jakobs S.	Proc Natl Acad Sci U S A	10.1073/pnas.2504748122	2025
Proteome	Phosphorylation of RecA at the Loop 1 region modulates its activity in response to DNA damage.	Hu J, Cao Y, Dai J, Tian B, Wang L, Hua Y, Zhao Y.	Int J Biol Macromol	10.1016/j.ijbiomac.2025.148652	2025
	S-layer protein of Corynebacterium glutamicum: A review on research progress and application potential.	Chang J, Fu X, Lu Y, Yang Y, Wen J, Lian J.	Int J Biol Macromol	10.1016/j.ijbiomac.2025.148282	2025
	Biochemical characterization and functional insights into DNA substrate-specific activities of a unique radiation-inducible DR1143 protein from Deinococcus radiodurans.	Anaganti N, Ujaoney AK, Padwal MK, Basu B.	Int J Biol Macromol	10.1016/j.ijbiomac.2025.143214	2025
	Biogenic synthesis of silver nanoparticles from Deinococcus radiodurans encapsulated with curcumin for enhanced antibiofilm activity.	Velmathi G, Sekar V, Santhanam A.	Microb Pathog	10.1016/j.micpath.2025.107462	2025
	The -10 region adjacent to open reading frames is a common expression pattern in Deinococcus-Thermus.	Zhong S, Wang L, Song S, Wang L, Hua Y, Lu H.	Life Sci Alliance	10.26508/lsa.202503354	2025
	UVC-Intense Exoplanets May Not Be Uninhabitable: Evidence from a Desert Lichen.	Singh T, Georgiou CD, Jeffrey CS, Tucker MJ, Philbin CS, Mahmud T, McKay CP, Sun HJ.	Astrobiology	10.1089/ast.2024.0137	2025
	Refolding of the Deinococcus Radiodurans phytochrome photosensory module and an extended backbone resonance assignment by solution NMR.	Vrhovac LS, Levkovets M, Orekhov VY, Westenhoff S.	Protein Expr Purif	10.1016/j.pep.2025.106699	2025
	Protective Effects of Deinoxanthin on Brain Oxidative Damage and Gut Microbiota in the D-Galactose-Induced Aging Mice.	Su H, Li Y, Wan J, Lin J, Wang J, Fan R, Liu D, Wei J, Xin H, Hua Y, Li S.	Mol Neurobiol	10.1007/s12035-025-05215-7	2025
	Quantitative redox proteomics links thioredoxin to heavy ion resistance in Deinococcus radiodurans.	Long Q, Li S, Zuo T, Duan X, Wu X, Chang L, Zhang Y, Wang Y, Zhang Z, Xu P.	Free Radic Biol Med	10.1016/j.freeradbiomed.2024.12.042	2025
	Surviving deadly radiation: Lessons from tardigrades.	Ghosh S, Vishnu D, Pillanjinayya S, Eswarappa S.	J Biosci	10.1007/s12038-025-00556-w	2025
	The Role of the MntABC Transporter System in the Oxidative Stress Resistance of Deinococcus radiodurans.	Wang B, Pang R, Cai C, Tan Z, Dai S, Tian B, Wang L.	Int J Mol Sci	10.3390/ijms26199407	2025
	Enhancing remediation efficiency of cadmium-contaminated soil: integrating forage-microorganism systems with agronomic strategies.	Chen R, Chen X, Xu Y, Ali I, Zhu W, Liu J, Wang Q, Huang W, Dai X.	Environ Geochem Health	10.1007/s10653-025-02383-2	2025
	Role of Yrn2 under oxidative stress in Deinococcus radiodurans.	Rai SN, Dutta T.	Biochem Biophys Res Commun	10.1016/j.bbrc.2024.150169	2024
	Spatial arrangement and density variations in the cell envelope of Deinococcus radiodurans.	Farci D, Piano D.	Can J Microbiol	10.1139/cjm-2023-0163	2024
	Protective effect of deinoxanthin in sorafenib-induced nephrotoxicity in rats with the hepatocellular carcinoma model.	Karasu N, Kuzucu M, Mat OC, Gul M, Yay A, Dundar M.	Naunyn Schmiedebergs Arch Pharmacol	10.1007/s00210-024-03633-3	2025
	Metal ion activation and DNA recognition by the Deinococcus radiodurans manganese sensor DR2539.	Mota C, Webster M, Saidi M, Kapp U, Zubieta C, Giachin G, Manso JA, de Sanctis D.	FEBS J	10.1111/febs.17140	2024
	Plasmid expression of Deinococcus radiodurans RecA confers UV-A protection to Escherichia coli with an inverse protein dose dependence, which does not exceed conspecific RecA protection.	Chinchilla OA, LiCata VJ.	Biochem Biophys Res Commun	10.1016/j.bbrc.2024.149890	2024
	Precise CRISPR/Cpf1 genome editing system in the Deinococcus radiodurans with superior DNA repair mechanisms.	Chen Z, Hu J, Dai J, Zhou C, Hua Y, Hua X, Zhao Y.	Microbiol Res	10.1016/j.micres.2024.127713	2024
	Surface Display of Multiple Metal-Binding Domains in Deinococcus radiodurans Alleviates Cadmium and Lead Toxicity in Rice.	Wang L, Wang Y, Dai S, Wang B.	Int J Mol Sci	10.3390/ijms252312570	2024
	Unraveling the Central Role of Global Regulator PprI in Deinococcus radiodurans Through Label-Free Quantitative Proteomics.	Zhu S, Liu F, Wang H, Zhang Y.	Proteomes	10.3390/proteomes13020019	2025
Genetics	Differential cellular localization of DNA gyrase and topoisomerase IB in response to DNA damage in Deinococcus radiodurans.	Mishra S, Tewari H, Chaudhary R, S Misra H, Kota S.	Extremophiles	10.1007/s00792-023-01323-1	2023
Enzymology	The use of a solar simulator device to standardize microbiological decontamination of contaminated water by solar disinfection by the SODIS and MB/SODIS protocols.	Rurr JSC, Paiva JP, Diniz RR, Leitao AADC, Hossy BH, Miguel NCO, de Alencar Santos Lage C.	Photochem Photobiol	10.1111/php.14023	2025
Phylogeny	Ultraviolet Resistance of Microorganisms Isolated from Uranium-Rich Minerals from Perus, Brazil.	Poletto B, Silva GG, Souza Ramos de Carvalho AC, Vincenzi RA, de Almeida EY, Galante D, Bendia AG, Rodrigues F.	Astrobiology	10.1089/ast.2022.0125	2024
	Antioxidant defense of Deinococcus radiodurans: how does it contribute to extreme radiation resistance?	Sadowska-Bartosz I, Bartosz G.	Int J Radiat Biol	10.1080/09553002.2023.2241895	2023
	A Cold-Induced LEA3 Protein, DohD, Confers Cryoprotective Protection Against Low-Temperature Stress in Deinococcus radiodurans.	Wang W, Qi Z, Yan C, Zhou Z, Wang J.	Int J Mol Sci	10.3390/ijms26083511	2025
	Discovery of 1,2,3-triazole-based pleuromutilin derivatives as potent gram-positive antibacterial agents.	Zhang J, Chen S, Liu X, Yu X, Gu N, Li A.	Bioorg Med Chem Lett	10.1016/j.bmcl.2024.129878	2024
	Crystal structure of phosphate bound Acyl phosphatase mini-enzyme from Deinococcus radiodurans at 1Å resolution.	Khakerwala Z, Kumar A, Makde RD.	Biochem Biophys Res Commun	10.1016/j.bbrc.2023.06.003	2023
	Structural and Mutational Analyses of Trehalose Synthase from Deinococcus radiodurans Reveal the Interconversion of Maltose-Trehalose Mechanism.	Ye LC, Chow SY, Chang SC, Kuo CH, Wang YL, Wei YJ, Lee GC, Liaw SH, Chen WM, Chen SC.	J Agric Food Chem	10.1021/acs.jafc.4c03661	2024
	Effects of temperature, chloride and perchlorate salt concentration on the metabolic activity of Deinococcus radiodurans.	Symeonidou E, Jorgensen UG, Madsen MB, Prieme A.	Extremophiles	10.1007/s00792-024-01351-5	2024
	Global regulator IrrE on stress tolerance: a review.	Wang L, Tan YS, Chen K, Ntakirutimana S, Liu ZH, Li BZ, Yuan YJ.	Crit Rev Biotechnol	10.1080/07388551.2023.2299766	2024
	Calculation of minimum energy pathways in transport proteins.	Yorke BA, Ginn HM.	Commun Chem	10.1038/s42004-025-01754-1	2025
	Cu/Zn-superoxide dismutase naturally fused with a beta-propeller lactonase in Deinococcus radiodurans.	Furukawa Y, Megata M, Shintani A, Sue K, Morohoshi T, Akutsu M, Muraki N.	J Biol Chem	10.1016/j.jbc.2025.110499	2025
	Deinococcus lineage and Rad52 family-related protein DR0041 is involved in DNA protection and compaction.	Ujaoney AK, Anaganti N, Padwal MK, Basu B.	Int J Biol Macromol	10.1016/j.ijbiomac.2023.125885	2023
	Susceptibility of extremophiles to far-UVC light for bioburden reduction in spacecraft assembly facilities.	Petersen C, Buonanno M, Guan L, Hinzer A, Urbano J, Hashmi R, Shuryak I, Parker C, Welch D.	Life Sci Space Res (Amst)	10.1016/j.lssr.2024.01.006	2024
	Synthetic Nuclease-Producing Microbiome Achieves Efficient Removal of Extracellular Antibiotic Resistance Genes from Wastewater Effluent.	Ren CY, Zhao HP.	Environ Sci Technol	10.1021/acs.est.3c07974	2023
	Insights into the Dynamics and Helicase Activity of RecD2 of Deinococcus radiodurans during DNA Repair: A Single-Molecule Perspective.	Islam F, Purkait D, Mishra PP.	J Phys Chem B	10.1021/acs.jpcb.3c00778	2023
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Genetics	DNA damage response and cell cycle regulation in bacteria: a twist around the paradigm.	Misra HS, Rajpurohit YS.	Front Microbiol	10.3389/fmicb.2024.1389074	2024
	Astaxanthin Overproduction Enhanced by Metabolomics-Guided Rational Metabolic Engineering in Synechococcus sp. PCC 7002.	Ida K, Tanaka K, Kato Y, Koike N, Horie Y, Matsuda M, Yasueda H, Kondo A, Hasunuma T.	ACS Synth Biol	10.1021/acssynbio.5c00490	2025
	The interconnecting hairpin extension "arm": An essential allosteric element of phytochrome activity.	Kurttila M, Rumfeldt J, Takala H, Ihalainen JA.	Structure	10.1016/j.str.2023.06.007	2023
	Desiccation induces varied responses within a soil bacterial genus.	Scales NC, Huynh KT, Weihe C, Martiny JBH.	Environ Microbiol	10.1111/1462-2920.16494	2023
	The Construction of an Extreme Radiation-Resistant Perchlorate-Reducing Bacterium Using Deinococcus deserti Promoters.	Chen S, Tan Z, Wang B, Xu H, Zhao Y, Tian B, Hua Y, Wang L.	Int J Mol Sci	10.3390/ijms252111533	2024
Enzymology	Proteomic profiling of Deinococcus radiodurans with response to thioredoxin reductase inhibitor and ionizing radiation treatment.	M S, N RP, Chakraborty A, Rajendrasozhan S.	J Proteomics	10.1016/j.jprot.2022.104697	2022
	A single-molecule approach to unravel the molecular mechanism of the action of Deinococcus radiodurans RecD2 and its interaction with SSB and RecA in DNA repair.	Purkait D, Islam F, Mishra PP.	Int J Biol Macromol	10.1016/j.ijbiomac.2022.09.043	2022
	The role of S-layer protein (SlpA) in biofilm-formation of Deinococcus radiodurans.	Shukla SK, Manobala T, Rao TS.	J Appl Microbiol	10.1111/jam.15613	2022
	Bacterial and fungal bioburden reduction on material surfaces using various sterilization techniques suitable for spacecraft decontamination.	Kimura S, Ishikawa S, Hayashi N, Fujita K, Inatomi Y, Suzuki S.	Front Microbiol	10.3389/fmicb.2023.1253436	2023
	Conserved histidine and tyrosine determine spectral responses through the water network in Deinococcus radiodurans phytochrome.	Lehtivuori H, Rumfeldt J, Mustalahti S, Kurkinen S, Takala H.	Photochem Photobiol Sci	10.1007/s43630-022-00272-6	2022
	An alternative interpretation for tailing in survival curves for bacteria exposed to germicidal radiation.	Oppezzo OJ, Abrevaya XC, Giacobone AFF.	Photochem Photobiol	10.1111/php.13808	2024
	Anti-allergic function of the cell wall (DeinoWall) from Deinococcus radiodurans.	Chen F, Ji HJ, Choi JI, Han SH, Lim S, Seo HS, Ahn KB.	Mol Immunol	10.1016/j.molimm.2022.09.004	2022
Enzymology	Redox status and metabolomic profiling of thioredoxin reductase inhibitors and 4 kGy ionizing radiation-exposed Deinococcus radiodurans.	Sudharsan M, Prasad NR, Kanimozhi G, Rishiikeshwer BS, Brindha GR, Chakraborty A.	Microbiol Res	10.1016/j.micres.2022.127070	2022
	TnpB structure reveals minimal functional core of Cas12 nuclease family.	Sasnauskas G, Tamulaitiene G, Druteika G, Carabias A, Silanskas A, Kazlauskas D, Venclovas C, Montoya G, Karvelis T, Siksnys V.	Nature	10.1038/s41586-023-05826-x	2023
	The ternary complex of Mn²⁺, synthetic decapeptide DP1 (DEHGTAVMLK), and orthophosphate is a superb antioxidant.	Yang H, Sharma A, Daly MJ, Hoffman BM.	Proc Natl Acad Sci U S A	10.1073/pnas.2417389121	2024
	Application of the transposon-associated TnpB system of CRISPR-Cas in bacteria: Deinococcus.	Yang ZQ, Li MJ, Ahmad F, Jin CZ, Li T, Jin FJ, Shin KS, Jin L.	Front Microbiol	10.3389/fmicb.2025.1604032	2025
Proteome	Radioresistance and radiosensitivity: a biophysical approach on bacterial cells robustness.	de Toledo Arruda-Neto JD, Righi H, Cabrera Gomez JG, Ferreira da Silva L, Drigo E, da Costa Lemos AC.	Theory Biosci	10.1007/s12064-022-00382-w	2023
	Tissue-Cultured Chondrocytes Survive After Irradiation in 1300 Gy Dose.	Baranovskii D, Smirnova A, Yakimova A, Kisel A, Koryakin S, Atiakshin D, Ignatyuk M, Potievskiy M, Saburov V, Budnik S, Sulina Y, Stepanenko VN, Churyukin R, Akhmedov B, Shegay P, Kaprin AD, Klabukov I.	Biomedicines	10.3390/biomedicines13092153	2025
	Enhancement of Lycopene Biosynthesis Using Self-Assembled Multi-Enzymic Protein Cages.	Zhou Y, Yao Y, Zhang F, Yu N, Wang B, Tian B.	Microorganisms	10.3390/microorganisms13040747	2025
	dELTA-MS: A Mass Spectrometry-Based Proteomics Approach for Identifying ADP-Ribosylation Sites and Forms.	Uribe IR, Zahn E, Searfoss R, Kim HB, Dasovich M, Voorneveld J, Hunt SR, Onuoha UC, Valadez C, Filippov DV, Na CH, Garcia BA, Orsburn BC, Leung AKL.	J Proteome Res	10.1021/acs.jproteome.4c00890	2025
	A Carotenoid- and Nuclease-Producing Bacterium Can Mitigate Enterococcus faecalis Transformation by Antibiotic Resistance Genes.	Ren CY, Xu QJ, Mathieu J, Alvarez PJJ, Zhu L, Zhao HP.	Environ Sci Technol	10.1021/acs.est.2c03919	2022
	Deinoxanthin Recovers H₂O₂-Stimulated Oxidative Complications of Bone Marrow-Derived Cells and Protects Mice from Irradiation-Mediated Impairments.	Bhattarai G, Kook SH, Shrestha SK, Park JH, Rijal S, Tae G, Hwang D, Park SM, Lee JC, Jeon YM.	Antioxidants (Basel)	10.3390/antiox14101180	2025
	The structure of Deinococcus radiodurans transcriptional regulator HucR retold with the urate bound.	Rho S, Jung W, Park JK, Choi MH, Kim M, Kim J, Byun J, Park T, Lee BI, Wilkinson SP, Park S.	Biochem Biophys Res Commun	10.1016/j.bbrc.2022.05.034	2022
Metabolism	Spatial chromosome organization and adaptation of the radiation-resistant extremophile Deinococcus radiodurans.	Qiu QT, Zhang CY, Gao ZP, Ma BG.	J Biol Chem	10.1016/j.jbc.2024.108068	2025
	Ground-state heterogeneity and vibrational energy redistribution in bacterial phytochrome observed with femtosecond 2D IR spectroscopy.	Chenchiliyan M, Kubel J, Ooi SA, Salvadori G, Mennucci B, Westenhoff S, Maj M.	J Chem Phys	10.1063/5.0135268	2023
	Dual-Cys bacteriophytochromes: intermediates in cyanobacterial phytochrome evolution?	Yang HW, Song JY, Song JJ, Kim YW, Rockwell NC, Kim W, Kim H, Lagarias JC, Park YI.	FEBS J	10.1111/febs.17395	2025
Genetics	Microbiome study of Murrah buffalo mastitis milk with emphasis on Acinetobacter species.	Sharma D, Valmiki H, Chayal P, Kumar S, Chhotaray S.	BMC Microbiol	10.1186/s12866-025-04458-7	2025
	Engineered bacteriophytochrome heterodimers for research and applications.	Tuure I, Bohm C, Rumfeldt J, Multamaki E, Takala H.	J Biol Chem	10.1016/j.jbc.2025.110452	2025
Genetics	DNA Polymerase I Large Fragment from Deinococcus radiodurans, a Candidate for a Cutting-Edge Room-Temperature LAMP.	Manzo M, Serra A, Pedone E, Pirone L, Scognamiglio V, De Felice M, De Falco M.	Int J Mol Sci	10.3390/ijms25031392	2024
	Effective gene silencing using type I-E CRISPR system in the multiploid, radiation-resistant bacterium Deinococcus radiodurans.	Misra CS, Pandey N, Appukuttan D, Rath D.	Microbiol Spectr	10.1128/spectrum.05204-22	2023
	Biochemical, Biophysical, and Structural Analysis of an Unusual DyP from the Extremophile Deinococcus radiodurans.	Frade K, Silveira CM, Salgueiro BA, Mendes S, Martins LO, Frazao C, Todorovic S, Moe E.	Molecules	10.3390/molecules29020358	2024
	Mutation Analysis of the rpoB Gene in the Radiation-Resistant Bacterium Deinococcus radiodurans R1 Exposed to Space during the Tanpopo Experiment at the International Space Station.	Fujiwara D, Kawaguchi Y, Kinoshita I, Yatabe J, Narumi I, Hashimoto H, Yokobori SI, Yamagishi A.	Astrobiology	10.1089/ast.2020.2424	2021
	Biotransformation of 2-keto-4-hydroxybutyrate via aldol condensation using an efficient and thermostable carboligase from Deinococcus radiodurans.	Jeong YJ, Seo MJ, Sung BH, Kim JS, Yeom SJ.	Bioresour Bioprocess	10.1186/s40643-024-00727-x	2024
	A Rare Mono-Rhamnolipid Congener Efficiently Produced by Recombinant Pseudomonas aeruginosa YM4 via the Expression of Global Transcriptional Regulator irrE.	Wang X, Li D, Yue S, Yuan Z, Li S.	Molecules	10.3390/molecules29091992	2024
Transcriptome	Development and Regulation of the Extreme Biofilm Formation of Deinococcus radiodurans R1 under Extreme Environmental Conditions.	Guo Q, Zhan Y, Zhang W, Wang J, Yan Y, Wang W, Lin M.	Int J Mol Sci	10.3390/ijms25010421	2023
	Isolation, functional characterization and antibiofilm properties of a lytic Enterococcus phage RG1 against multidrug resistant E. faecium.	Singh RK, Anand R, Singh A, Rain Z, Prakash P, Maurya GK.	Sci Rep	10.1038/s41598-025-21701-3	2025
	Characterization of a Novel N4-Methylcytosine Restriction-Modification System in Deinococcus radiodurans.	Shi C, Wang L, Xu H, Zhao Y, Tian B, Hua Y.	Int J Mol Sci	10.3390/ijms25031660	2024
	Intramolecular electron transfer from biopterin to Fe^II-O₂ complex in nitric oxide synthases occurs at very different rates between bacterial and mammalian enzymes: Direct observation of a catalytically active intermediate.	Kobayashi K, Ito YT, Kasu Y, Horitani M, Kozawa T.	J Inorg Biochem	10.1016/j.jinorgbio.2022.112035	2023
	Prospects for coherent X-ray diffraction imaging at fourth-generation synchrotron sources.	Chushkin Y, Zontone F.	IUCrJ	10.1107/s2052252525001526	2025
	Studies of multifunctional DNA polymerase I from the extremely radiation resistant Deinococcus radiodurans: Recombinant expression, purification and characterization of the full-length protein and its large fragment.	Fernandes A, Piotrowski Y, Williamson A, Frade K, Moe E.	Protein Expr Purif	10.1016/j.pep.2021.105925	2021
	Ultrafast, remote-controlled protonation reaction enables structural changes in a phytochrome.	Shankar MK, Grunewald L, Wahlgren WY, Stucki-Buchli B, Nimmrich A, Kurttila M, Fischer AL, Salvadori G, Cellini A, Maj P, Anindya AL, Claesson E, Luo F, Malla TN, Pandey S, Tosha T, Nipawan N, Owada S, Tono K, Tanaka R, Stojkovic EA, Mozorov D, Myllyperkio P, Kumpulainen T, Takala H, Schmidt M, Ihalainen JA, Westenhoff S.	Sci Adv	10.1126/sciadv.ady0499	2025
	Single-molecule tracking of PprI in D. radiodurans without interference of autoblinking.	Zhai F, Hao L, Chen X, Jiang T, Guo Q, Xie L, Ma Y, Du X, Zheng Z, Chen K, Fan J.	Front Microbiol	10.3389/fmicb.2023.1256711	2023
	Metal removal by metallothionein and an acid phosphatase PhoN, surface-displayed on the cells of the extremophile, Deinococcus radiodurans.	Misra CS, Sounderajan S, Apte SK.	J Hazard Mater	10.1016/j.jhazmat.2021.126477	2021
Proteome	New Insights into Radio-Resistance Mechanism Revealed by (Phospho)Proteome Analysis of Deinococcus Radiodurans after Heavy Ion Irradiation.	Liu S, Wang F, Wang F, Chen H, Yang Z, Ning Y, Chang C, Yang D.	Int J Mol Sci	10.3390/ijms241914817	2023
Metabolism	Structural analysis of the architecture and in situ localization of the main S-layer complex in Deinococcus radiodurans.	Farci D, Kereiche S, Pangeni S, Haniewicz P, Bodrenko IV, Ceccarelli M, Winterhalter M, Piano D.	Structure	10.1016/j.str.2021.06.014	2021
	Mechanisms of helicase activated DNA end resection in bacteria.	Xu Y, Xu L, Qin C, Wang L, Guo J, Hua Y, Zhao Y.	Structure	10.1016/j.str.2022.06.005	2022
Enzymology	Biochemical characterization of a unique DNA polymerase A from the extreme radioresistant organism Deinococcus radiodurans.	Zhou X, Chen X, An Y, Lu H, Wang L, Xu H, Tian B, Zhao Y, Hua Y.	Biochimie	10.1016/j.biochi.2021.02.014	2021
	Programmable DNA pyrimidine base editing via engineered uracil-DNA glycosylase.	Yi Z, Zhang X, Wei X, Li J, Ren J, Zhang X, Zhang Y, Tang H, Chang X, Yu Y, Wei W.	Nat Commun	10.1038/s41467-024-50012-w	2024
	A highly immunogenic UVC inactivated Sabin based polio vaccine.	Tobin GJ, Tobin JK, Wiggins TJ, Bushnell RV, Kozar AV, Maale MF, MacLeod DA, Meeks HN, Daly MJ, Dollery SJ.	NPJ Vaccines	10.1038/s41541-024-00995-w	2024
Metabolism	Ultraviolet-B Radiation Stress-Induced Toxicity and Alterations in Proteome of Deinococcus radiodurans.	Kumar J, Ghosh P, Kumar A.	Microb Physiol	10.1159/000512018	2021
	Sterilizing Ability of High-Voltage Pulsed Discharge Plasma with Cavitation for Microorganisms Including Radio-Resistant Bacterium in Water.	Terato H, Tokuyama Y, Nishiyama H, Matsunaga T, Yoshida Y, Ihara S.	Biocontrol Sci	10.4265/bio.27.41	2022
	Protective Effects of Halite to Vacuum and Vacuum-Ultraviolet Radiation: A Potential Scenario During a Young Sun Superflare.	Abrevaya XC, Galante D, Tribelli PM, Oppezzo OJ, Nobrega F, Araujo GG, Rodrigues F, Odert P, Leitzinger M, Ricardi MM, Varela ME, Gallo T, Sanz-Forcada J, Ribas I, Porto de Mello GF, Rodler F, Cerini MF, Hanslmeier A, Horvath JE.	Astrobiology	10.1089/ast.2022.0016	2023
	Colonized extremophile Deinococcus radiodurans alleviates toxicity of cadmium and lead by suppressing heavy metal accumulation and improving antioxidant system in rice.	Dai S, Chen Q, Jiang M, Wang B, Xie Z, Yu N, Zhou Y, Li S, Wang L, Hua Y, Tian B.	Environ Pollut	10.1016/j.envpol.2021.117127	2021
	An in vivo Interaction Network of DNA-Repair Proteins: A Snapshot at Double Strand Break Repair in Deinococcus radiodurans.	Ujaoney AK, Padwal MK, Basu B.	J Proteome Res	10.1021/acs.jproteome.1c00078	2021
	Transposition of insertion sequences by dielectric barrier discharge plasma and gamma irradiation in the radiation-resistant bacterium Deinococcus geothermalis.	Ye Q, Shin E, Lee C, Choi N, Kim Y, Yoon KS, Lee SJ.	J Microbiol Methods	10.1016/j.mimet.2022.106473	2022
	New insights into the activation of Radiation Desiccation Response regulon in Deinococcus radiodurans.	Narasimha A, Basu B.	J Biosci	10.1007/s12038-020-00123-5	2021
Genetics	Involvement of Nucleotide Excision Repair and Rec-Dependent Pathway Genes for UV Radiation Resistance in Deinococcus irradiatisoli 17bor-2.	Subramani G, Srinivasan S.	Genes (Basel)	10.3390/genes14091803	2023
	Comprehensive Temporal Protein Dynamics during Postirradiation Recovery in Deinococcus radiodurans.	Xiong Y, Wei L, Xin S, Min R, Liu F, Li N, Zhang Y.	Oxid Med Cell Longev	10.1155/2022/1622829	2022
	In silico structural analysis of Oryza sativa RAD51 reveals key interactions for nucleoprotein filament assembly and regulation.	Azeem A, Ali SF, Anjum RS.	PLoS One	10.1371/journal.pone.0335974	2025
	Analogies and Differences in the Photoactivation Mechanism of Bathy and Canonical Bacteriophytochromes Revealed by Multiscale Modeling.	Salvadori G, Mennucci B.	J Phys Chem Lett	10.1021/acs.jpclett.4c01823	2024
	Kinetic modelling of the uranium biosorption by Deinococcus radiodurans biofilm.	Manobala T, Shukla SK, Rao TS, Kumar MD.	Chemosphere	10.1016/j.chemosphere.2020.128722	2021
	Engineering tripartite gene editing machinery for highly efficient non-viral targeted genome integration.	Nam H, Xie K, Majumdar I, Wang J, Yang S, Starzyk J, Lee D, Shan R, Li J, Wu H.	Nat Commun	10.1038/s41467-025-59790-3	2025
	Characterization of radiation-resistance mechanism in Spirosoma montaniterrae DY10^T in terms of transcriptional regulatory system.	Cho C, Lee D, Jeong D, Kim S, Kim MK, Srinivasan S.	Sci Rep	10.1038/s41598-023-31509-8	2023
Metabolism	N6-methyladenine and epigenetic immunity of Deinococcus radiodurans.	Joshi S, Ujaoney AK, Ghosh P, Deobagkar DD, Basu B.	Res Microbiol	10.1016/j.resmic.2020.10.004	2021
	Correction to: Understanding the survival mechanisms of Deinococcus radiodurans against oxidative stress by targeting thioredoxin reductase redox system.	Maqbool I, Ponniresan VK, Govindasamy K, Prasad NR.	Arch Microbiol	10.1007/s00203-020-01953-5	2020
	Production of Cadaverine in Recombinant Corynebacterium glutamicum Overexpressing Lysine Decarboxylase (ldcC) and Response Regulator dr1558.	Kang SB, Choi JI.	Appl Biochem Biotechnol	10.1007/s12010-021-03685-8	2022
Metabolism	Small RNAs as a New Platform for Tuning the Biosynthesis of Silver Nanoparticles for Enhanced Material and Functional Properties.	Chen A, Hernandez-Vargas J, Han R, Cortazar-Martinez O, Gonzalez N, Patel S, Keitz BK, Luna-Barcenas G, Contreras LM.	ACS Appl Mater Interfaces	10.1021/acsami.1c07400	2021
	Natural products derived from medicinal plants and microbes might act as a game-changer in breast cancer: a comprehensive review of preclinical and clinical studies.	Singla RK, Wang X, Gundamaraju R, Joon S, Tsagkaris C, Behzad S, Khan J, Gautam R, Goyal R, Rakmai J, Dubey AK, Simal-Gandara J, Shen B.	Crit Rev Food Sci Nutr	10.1080/10408398.2022.2097196	2023
Metabolism	Purification from Deinococcus radiodurans of a 66 kDa ABC transporter acting on peptides containing at least 3 amino acids.	Stefan A, Gentilucci L, Piaz FD, D'Alessio F, Santino F, Hochkoeppler A.	Biochem Biophys Res Commun	10.1016/j.bbrc.2020.06.060	2020
Enzymology	Sustainable Bioconversion of Methanol: A Renewable Employing Novel Alcohol Oxidase and Pyruvate Aldolase.	Kim JY, Jeong YJ, Sung BH, Seo MJ, Yeom SJ.	J Agric Food Chem	10.1021/acs.jafc.4c12671	2025
	Nanoscale surface structures of DNA bound to Deinococcus radiodurans HU unveiled by atomic force microscopy.	Chen SW, Banneville AS, Teulon JM, Timmins J, Pellequer JL.	Nanoscale	10.1039/d0nr05320a	2020
Metabolism	Topoisomerase IB interacts with genome segregation proteins and is involved in multipartite genome maintenance in Deinococcus radiodurans.	Kota S, Chaudhary R, Mishra S, Misra HS.	Microbiol Res	10.1016/j.micres.2020.126609	2021
	Designer probiotic-based living drugs for uric acid homeostasis control in hyperuricemic mice and rats.	Gao X, Jin Y, Liu M, Ma W, Kong D, Zhou Y, Niu L, Yin J, Chen H, Ye H, Guan N.	Cell Rep Med	10.1016/j.xcrm.2025.102379	2025
	SLICER: A Seamless Gene Deletion Method for Deinococcus radiodurans.	Brumwell SL, Van Belois KD, Nucifora DP, Karas BJ.	Biodes Res	10.34133/bdr.0009	2023
	MoaE Is Involved in Response to Oxidative Stress in Deinococcus radiodurans.	Cai J, Zhang M, Chen Z, Zhao Y, Xu H, Tian B, Wang L, Hua Y.	Int J Mol Sci	10.3390/ijms24032441	2023
	DR0022 from Deinococcus radiodurans is an acid uracil-DNA glycosylase.	Li J, Yang Y, Chang C, Cao W.	FEBS J	10.1111/febs.16533	2022
Enzymology	Crystal structure of the AhpD-like protein DR1765 from Deinococcus radiodurans R1.	Zhao L, Jeong S, Zhang J, Jung JH, Choi JI, Lim S, Kim MK.	Biochem Biophys Res Commun	10.1016/j.bbrc.2020.06.061	2020
Metabolism	High-Yield Production of Lycopene from Corn Steep Liquor and Glycerol Using the Metabolically Engineered Deinococcus radiodurans R1 Strain.	Kang CK, Jeong SW, Yang JE, Choi YJ.	J Agric Food Chem	10.1021/acs.jafc.0c01024	2020
	Crystal structure of the photosensory module from a PAS-less cyanobacterial phytochrome as Pr shows a mix of dark-adapted and photoactivated features.	Burgie ES, Mickles AJ, Luo F, Miller MD, Vierstra RD.	J Biol Chem	10.1016/j.jbc.2024.107369	2024
	The hairpin extension controls solvent access to the chromophore binding pocket in a bacterial phytochrome: a UV-vis absorption spectroscopy study.	Rumfeldt J, Kurttila M, Takala H, Ihalainen JA.	Photochem Photobiol Sci	10.1007/s43630-021-00090-2	2021
Metabolism	Late embryogenesis abundant group3 protein (DrLEA3) is involved in antioxidation in the extremophilic bacterium Deinococcus radiodurans.	Dai J, Gao K, Yao T, Lu H, Zhou C, Guo M, Dai S, Wang L, Xu H, Tian B, Hua Y, Zhao Y.	Microbiol Res	10.1016/j.micres.2020.126559	2020
	High-throughput cryo-electron tomography enables multiscale visualization of the inner life of microbes.	Heydari S, Liu J.	Curr Opin Struct Biol	10.1016/j.sbi.2025.103065	2025
	Gamma Ray-induced Mutations in pyrEF Genes in Frankia casuarinae Strain CcI3.	Kucho KI, Han O, Yunoki M.	Microbes Environ	10.1264/jsme2.me24062	2025
	Metabolite phosphatase from anhydrobiotic tardigrades.	Kato S, Deguchi K, Obana M, Fujio Y, Fukuda Y, Inoue T.	FEBS J	10.1111/febs.17296	2024
	Structure-guided engineering of a polyphosphate kinase 2 class III from an Erysipelotrichaceae bacterium to produce base-modified purine nucleotides.	Mitton-Fry RM, Rasche R, Lawrence-Dorner AM, Eschenbach J, Tekath A, Rentmeister A, Kummel D, Cornelissen NV.	RSC Chem Biol	10.1039/d5cb00108k	2025
	Interdigitated immunoglobulin arrays form the hyperstable surface layer of the extremophilic bacterium Deinococcus radiodurans.	von Kugelgen A, van Dorst S, Yamashita K, Sexton DL, Tocheva EI, Murshudov G, Alva V, Bharat TAM.	Proc Natl Acad Sci U S A	10.1073/pnas.2215808120	2023
	The structured organization of Deinococcus radiodurans' cell envelope.	Farci D, Haniewicz P, Piano D.	Proc Natl Acad Sci U S A	10.1073/pnas.2209111119	2022
Metabolism	Dynamic Properties of the Photosensory Domain of Deinococcus radiodurans Bacteriophytochrome.	Battocchio G, Gonzalez R, Rao AG, Schapiro I, Mroginski MA.	J Phys Chem B	10.1021/acs.jpcb.0c00612	2020
	Memory Effect on the Survival of Deinococcus radiodurans after Exposure in Near Space.	Chen Y, Zhang Q, Wang D, Shu YG, Shi H.	Microbiol Spectr	10.1128/spectrum.03474-22	2023
Metabolism	Photophysics of deinoxanthin, the keto-carotenoid bound to the main S-layer unit of Deinococcus radiodurans.	Adamec F, Farci D, Bina D, Litvin R, Khan T, Fuciman M, Piano D, Polivka T.	Photochem Photobiol Sci	10.1039/d0pp00031k	2020
	Structure/function studies of the NAD⁺-dependent DNA ligase from the poly-extremophile Deinococcus radiodurans reveal importance of the BRCT domain for DNA binding.	Fernandes A, Williamson A, Matias PM, Moe E.	Extremophiles	10.1007/s00792-023-01309-z	2023
Genetics	Essential and dispensable domains of DivIVA for walled growth in filamentous Actinomycetota.	Lubbers M, Bajramovic B, Ongenae V, Willemse J, de Bruin D, Mulder N, Zhang L, Vriesendorp B, Barona-Gomez F, Briegel A, van Wezel GP, Flardh K, Claessen D.	Open Biol	10.1098/rsob.250213	2025
	Structural and Functional Characterization of the Holliday Junction Resolvase RuvC from Deinococcus radiodurans.	Qin C, Han W, Xu Y, Zhao Y, Xu H, Tian B, Wang L, Hua Y.	Microorganisms	10.3390/microorganisms10061160	2022
	Deinococcus radiodurans R1 Lysate Induces Tolerogenic Maturation in Lipopolysaccharide-Stimulated Dendritic Cells and Protects Dextran Sulfate Sodium-Induced Colitis in Mice.	Song HY, Han JM, Kim WS, Lee JH, Park WY, Byun EB, Byun EH.	J Microbiol Biotechnol	10.4014/jmb.2203.03008	2022
Enzymology	Identification of a 1-deoxy-D-xylulose-5-phosphate synthase (DXS) mutant with improved crystallographic properties.	Gierse RM, Reddem ER, Alhayek A, Baitinger D, Hamid Z, Jakobi H, Laber B, Lange G, Hirsch AKH, Groves MR.	Biochem Biophys Res Commun	10.1016/j.bbrc.2020.12.069	2021
	Identification of leader-trailer helices of precursor ribosomal RNA in all phyla of bacteria and archaea.	Gemler BT, Warner BR, Bundschuh R, Fredrick K.	RNA	10.1261/rna.080091.124	2024
Proteome	iTRAQ-based proteomic analysis of Deinococcus radiodurans in response to ¹²C⁶⁺ heavy ion irradiation.	Gao Y, Li N, Zhou Y, Zhang Z, Zhang Y, Fan P, Zhou H, Zhang T, Chang L, Gao H, Li Y, Kang X, Xie Q, Lyu Z, Xu P.	BMC Microbiol	10.1186/s12866-022-02676-x	2022
Enzymology	Understanding the survival mechanisms of Deinococcus radiodurans against oxidative stress by targeting thioredoxin reductase redox system.	Maqbool I, Ponniresan VK, Govindasamy K, Prasad NR.	Arch Microbiol	10.1007/s00203-019-01729-6	2020
Phylogeny	Comparative microbiome profiling reveals unique signatures in multiple primary lung cancers.	Chen Y, Wang Y, Shen S, Lu J, Peng Q, Yan X, Peng H, Xu Z.	Transl Cancer Res	10.21037/tcr-2025-926	2025
	A new uranium bioremediation approach using radio-tolerant Deinococcus radiodurans biofilm.	Manobala T, Shukla SK, Rao TS, Kumar MD.	J Biosci	10.1007/s12038-019-9942-y	2019
	Reversibly photoswitchable protein assemblies with collagen affinity for in vivo photoacoustic imaging of tumors.	Chen S, Li K, Chen X, Lei S, Lin J, Huang P.	Sci Adv	10.1126/sciadv.adn8274	2024
	G-quadruplex DNA structures and their relevance in radioprotection.	Kumari N, Raghavan SC.	Biochim Biophys Acta Gen Subj	10.1016/j.bbagen.2021.129857	2021
	Engineering rice Nramp5 modifies cadmium and manganese uptake selectivity using yeast assay system.	Inoue J, Teramoto T, Kazama T, Nakamura T.	Front Plant Sci	10.3389/fpls.2024.1482099	2024
	Liquid Phase Electron Microscopy of Bacterial Ultrastructure.	Caffrey BJ, Pedrazo-Tardajos A, Liberti E, Gaunt B, Kim JS, Kirkland AI.	Small	10.1002/smll.202402871	2024
Metabolism	Antioxidative system of Deinococcus radiodurans.	Qi HZ, Wang WZ, He JY, Ma Y, Xiao FZ, He SY.	Res Microbiol	10.1016/j.resmic.2019.11.002	2020
	Local and Global Motions Underlying Antibiotic Binding in Bacterial Ribosome.	Kurkcuoglu O, Gunes MU, Haliloglu T.	J Chem Inf Model	10.1021/acs.jcim.0c00967	2020
	Prophylactically Feeding Manganese to Drosophila Confers Sex-Specific Protection from Acute Ionizing Radiation Independent of MnSOD2 Levels.	Volpe RP, Sen A, Sharma A, Kathiresan V, Hoffman BM, Cox RT.	Antioxidants (Basel)	10.3390/antiox14020134	2025
	Improved Salt Tolerance in Brassica napus L. Overexpressing a Synthetic Deinocuccus Stress-Resistant Module DICW.	Dai Q, Zhang L, Jiang S, Su B, Li Z, Shuai Y, Wang J.	Int J Mol Sci	10.3390/ijms26062500	2025
Metabolism	Gene regulation for the extreme resistance to ionizing radiation of Deinococcus radiodurans.	Wang W, Ma Y, He J, Qi H, Xiao F, He S.	Gene	10.1016/j.gene.2019.144008	2019
	High-resolution structures with bound Mn²⁺ and Cd²⁺ map the metal import pathway in an Nramp transporter.	Ray S, Berry SP, Wilson EA, Zhang CH, Shekhar M, Singharoy A, Gaudet R.	Elife	10.7554/elife.84006	2023
	Probing the sORF-Encoded Peptides of Deinococcus radiodurans in Response to Extreme Stress.	Zhou C, Wang Q, Huang Y, Chen Z, Chen S, Zhao Y, Jia C.	Mol Cell Proteomics	10.1016/j.mcpro.2022.100423	2022
Metabolism	BamA is a pivotal protein in cell envelope synthesis and cell division in Deinococcus radiodurans.	Yu J, Lu L.	Biochim Biophys Acta Biomembr	10.1016/j.bbamem.2019.05.010	2019
Enzymology	Investigating the efficacy of UVSE protein at repairing CPD and 6-4 pp DNA damages in human cells.	Helalat SH, Moradi M, Heidari H, Rezaei F, Yarmohamadi M, Sayadi M, Dadashkhan S, Eydi F.	J Photochem Photobiol B	10.1016/j.jphotobiol.2020.111843	2020
Metabolism	Succinylome Analysis Reveals the Involvement of Lysine Succinylation in the Extreme Resistance of Deinococcus radiodurans.	Zhou C, Dai J, Lu H, Chen Z, Guo M, He Y, Gao K, Ge T, Jin J, Wang L, Tian B, Hua Y, Zhao Y.	Proteomics	10.1002/pmic.201900158	2019
	Microbial Community Composition and Function in Jiangsu Oil Reservoir Cores, China.	Wang BW, Liu YF, Chen LG, Wang B, Qian ZH, Yang F, Cai JC, Zhou L, Yang SZ, Gu JD, Mu BZ.	Environ Microbiol Rep	10.1111/1758-2229.70229	2025
	A Novel Glycoside Hydrolase DogH Utilizing Soluble Starch to Maltose Improve Osmotic Tolerance in Deinococcus radiodurans.	Gui Y, Lin M, Yan Y, Jiang S, Zhou Z, Wang J.	Int J Mol Sci	10.3390/ijms24043437	2023
	Site-by-site tracking of signal transduction in an azidophenylalanine-labeled bacteriophytochrome with step-scan FTIR spectroscopy.	Kurttila M, Stucki-Buchli B, Rumfeldt J, Schroeder L, Hakkanen H, Liukkonen A, Takala H, Kottke T, Ihalainen JA.	Phys Chem Chem Phys	10.1039/d0cp06553f	2021
Metabolism	DrRecQ regulates guanine quadruplex DNA structure dynamics and its impact on radioresistance in Deinococcus radiodurans.	Khairnar NP, Maurya GK, Pandey N, Das A, Misra HS.	Mol Microbiol	10.1111/mmi.14321	2019
	Signaling Mechanism of Phytochromes in Solution.	Isaksson L, Gustavsson E, Persson C, Brath U, Vrhovac L, Karlsson G, Orekhov V, Westenhoff S.	Structure	10.1016/j.str.2020.08.009	2021
	Functionalized Nanomaterial Assembling and Biosynthesis Using the Extremophile Deinococcus radiodurans for Multifunctional Applications.	Li J, Webster TJ, Tian B.	Small	10.1002/smll.201900600	2019
	Structural and functional investigation of the DHH/DHHA1 family proteins in Deinococcus radiodurans.	Wang Y, Hao W, Guo Z, Sun Y, Wu Y, Sun Y, Gao T, Luo Y, Jin L, Yang J, Cheng K.	Nucleic Acids Res	10.1093/nar/gkae451	2024
Phylogeny	Finding priority bacterial ribosomes for future structural and antimicrobial research based upon global RNA and protein sequence analysis.	Cooper HB, Krause KL, Gardner PP.	PeerJ	10.7717/peerj.14969	2023
	Significant impacts of metal ions from ancient oceans on nucleoside phosphorylation	Wu Q, Lu S, Zhang C, Zhong W, Zhao H, Zhao Y, Huang B.	BMC Chem		2025
	Phosphorylation Regulation of a Histone-like HU Protein from Deinococcus radiodurans.	Hou J, Dai J, Chen Z, Wang Y, Cao J, Hu J, Ye S, Hua Y, Zhao Y.	Protein Pept Lett	10.2174/0929866529666220819121911	2022
	PNGaseL from Flavobacterium akiainvivens targets a diverse range of N-glycan structures	Bakshani C, Urbanowicz P, Badia Tortosa C, Melo Diaz J, Kujawska M, Ojuri T, Hall L, Spencer D, Bolam D, Crouch L.	R Soc Open Sci		2025
	Lysine Acetylome Profiling Reveals Diverse Functions of Acetylation in Deinococcus radiodurans.	Zhang Y, Li N, Wei Q, Min R, Liu F, Wang F, Deng Y.	Microbiol Spectr	10.1128/spectrum.01016-21	2022
Metabolism	Distinct roles of Deinococcus radiodurans RecFOR and RecA in DNA transformation.	Wang Y, Xu G, Wang L, Hua Y.	Biochem Biophys Res Commun	10.1016/j.bbrc.2019.04.042	2019
	Phylogenetic Relationships among TnpB-Containing Mobile Elements in Six Bacterial Species.	Wang Y, Guo M, Yang N, Guan Z, Wu H, Ullah N, Asare E, Shi S, Gao B, Song C.	Genes (Basel)	10.3390/genes14020523	2023
Enzymology	The extraordinary resistance to UV radiations of a manganese superoxide dismutase of Deinococcus radiodurans offers promising potentialities in skin care applications.	Palmieri G, Arciello S, Bimonte M, Carola A, Tito A, Gogliettino M, Cocca E, Fusco C, Balestrieri M, Colucci MG, Apone F.	J Biotechnol	10.1016/j.jbiotec.2019.07.002	2019
Genetics	Complete genome sequence of Deinococcus rubellus Ant6 isolated from the fish muscle in the Antarctic Ocean.	De Mandal S, Srinivasan S, Jeon J.	Front Bioeng Biotechnol	10.3389/fbioe.2023.1257705	2023
Enzymology	Phosphorylation of deinococcal RecA affects its structural and functional dynamics implicated for its roles in radioresistance of Deinococcus radiodurans.	Sharma DK, Siddiqui MQ, Gadewal N, Choudhary RK, Varma AK, Misra HS, Rajpurohit YS.	J Biomol Struct Dyn	10.1080/07391102.2019.1568916	2020
Metabolism	Interactions in the active site of Deinococcus radiodurans RNA polymerase during RNA proofreading.	Esyunina D, Kulbachinskiy A.	Biochem Biophys Res Commun	10.1016/j.bbrc.2018.12.095	2019
	Complexation of CcmB with CcmACD safeguards heme translocation for cytochrome c maturation.	Xu Y, Wang W, Zhang Q, Han S, Wang J, Wu S, Gao H.	mLife	10.1002/mlf2.12150	2025
Genetics	Characterisation of ParB encoded on multipartite genome in Deinococcus radiodurans and their roles in radioresistance.	Maurya GK, Kota S, Misra HS.	Microbiol Res	10.1016/j.micres.2019.03.005	2019
	MPBind: a multitask protein binding site predictor using protein language models and equivariant GNNs.	Wang Y, Boadu F, Cheng J.	Bioinformatics	10.1093/bioinformatics/btaf589	2025
	Immune and Safety Analysis of ultraIPV^TM, a Novel UVC-Inactivated Polio Vaccine.	MacLeod DA, Tobin JK, Bushnell RV, Wiggins TJ, Ts S, Nadipelly R, Lawson S, Pillai VV, Tobin GJ, Dollery SJ.	Viruses	10.3390/v17070915	2025
	Crystal structure of the highly radiation-inducible DinB/YfiT superfamily protein DR0053 from Deinococcus radiodurans R1.	Zhang J, Zhao L, Seo HS, Jung JH, Choi JI, Kim MK, Lim S.	Biochem Biophys Res Commun	10.1016/j.bbrc.2019.03.209	2019
	Scalable One-Pot Production of Geranylgeranylated Proteins in Engineered Prokaryotes.	Hossain MS, Alam MM, Huang Z, Mousazadeh F, Sarangi R, de Jong E, Kolamunna KC, Adhya AL, Hougland JL, Acharya A, Mozhdehi D.	Bioconjug Chem	10.1021/acs.bioconjchem.4c00493	2025
	Elucidating the role of structural fluctuations, and intermolecular and vibronic interactions in the spectroscopic response of a bacteriophytochrome.	Macaluso V, Cupellini L, Salvadori G, Lipparini F, Mennucci B.	Phys Chem Chem Phys	10.1039/d0cp00372g	2020
	ParA proteins of secondary genome elements cross-talk and regulate radioresistance through genome copy number reduction in Deinococcus radiodurans.	Kumar Maurya G, Kota S, Kumar NN, Tewari R, Misra HS.	Biochem J	10.1042/bcj20180799	2019
Metabolism	Metabolic Engineering of Deinococcus radiodurans for the Production of Phytoene.	Jeong SW, Kang CK, Choi YJ.	J Microbiol Biotechnol	10.4014/jmb.1808.08019	2018
Pathogenicity	Strategies to increase the robustness of microbial cell factories.	Xu P, Lin NQ, Zhang ZQ, Liu JZ.	Adv Biotechnol (Singap)	10.1007/s44307-024-00018-8	2024
Metabolism	A single-nucleotide variant conditions the ability vs. inability of Propionibacterium freudenreichii to utilize L-lactate.	Cocuzzi R, Turgay M, Schmidt RS, von Ah U, Bachmann H-P, Weisskopf L, Frohlich-Wyder M-T.	Appl Environ Microbiol	10.1128/aem.00599-25	2025
	The Effect of the Presence and Absence of DNA Repair Genes on the Rate and Pattern of Mutation in Bacteria.	Kalogiannis G, Eyre-Walker A.	Genome Biol Evol	10.1093/gbe/evae216	2024
Enzymology	The three Endonuclease III variants of Deinococcus radiodurans possess distinct and complementary DNA repair activities.	Sarre A, Stelter M, Rollo F, De Bonis S, Seck A, Hognon C, Ravanat JL, Monari A, Dehez F, Moe E, Timmins J.	DNA Repair (Amst)	10.1016/j.dnarep.2019.03.014	2019
Enzymology	Crystal structures of pyrrolidone-carboxylate peptidase I from Deinococcus radiodurans reveal the mechanism of L-pyroglutamate recognition.	Agrawal R, Singh R, Kumar A, Kumar A, Makde RD.	Acta Crystallogr D Struct Biol	10.1107/s2059798319000676	2019
Genetics	FtsZ phosphorylation brings about growth arrest upon DNA damage in Deinococcus radiodurans.	Chaudhary R, Mishra S, Maurya GK, Rajpurohit YS, Misra HS.	FASEB Bioadv	10.1096/fba.2022-00082	2023
Enzymology	A Novel Small RNA, DsrO, in Deinococcus radiodurans Promotes Methionine Sulfoxide Reductase (msrA) Expression for Oxidative Stress Adaptation.	Chen Y, Zhao M, Lv M, Lin M, Wang J, Zuo K.	Appl Environ Microbiol	10.1128/aem.00038-22	2022
Metabolism	N-terminal domain of DivIVA contributes to its dimerization and interaction with genome segregation proteins in a radioresistant bacterium Deinococcus radiodurans.	Chaudhary R, Gupta A, Kota S, Misra HS.	Int J Biol Macromol	10.1016/j.ijbiomac.2019.01.085	2019
Enzymology	Single-molecule probing the duplex and G4 unwinding patterns of a RecD family helicase.	Xue ZY, Wu WQ, Zhao XC, Kumar A, Ran X, Zhang XH, Zhang Y, Guo LJ.	Int J Biol Macromol	10.1016/j.ijbiomac.2020.07.158	2020
Metabolism	Pleiotropic effects of a cold shock protein homolog PprM on the proteome of Deinococcus radiodurans.	Anaganti N, Padwal MK, Dani P, Basu B.	Biochim Biophys Acta Proteins Proteom	10.1016/j.bbapap.2018.10.015	2019
	A narrow range of transcript-error rates across the Tree of Life.	Li W, Baehr S, Marasco M, Reyes L, Brister D, Pikaard CS, Gout JF, Vermulst M, Lynch M.	Sci Adv	10.1126/sciadv.adv9898	2025
Genetics	Polyextremophile engineering: a review of organisms that push the limits of life.	Caro-Astorga J, Meyerowitz JT, Stork DA, Nattermann U, Piszkiewicz S, Vimercati L, Schwendner P, Hocher A, Cockell C, DeBenedictis E.	Front Microbiol	10.3389/fmicb.2024.1341701	2024
Genetics	Plasmids for making multiple knockouts in a radioresistant bacterium Deinococcus radiodurans.	Maurya GK, Misra HS.	Plasmid	10.1016/j.plasmid.2018.09.003	2018
	Extended structure of pleiotropic DNA repair-promoting protein PprA from Deinococcus radiodurans.	Adachi M, Shimizu R, Shibazaki C, Satoh K, Fujiwara S, Arai S, Narumi I, Kuroki R.	FASEB J	10.1096/fj.201801506r	2019
	Radioprotective efficacy of GSH based peptidomimetic complex of manganese against radiation induced damage: DT(GS)₂Mn(II).	Khurana H, Hazari PP, Mishra AK.	Free Radic Biol Med	10.1016/j.freeradbiomed.2019.09.023	2019
Metabolism	Co-expression of YieF and PhoN in Deinococcus radiodurans R1 improves uranium bioprecipitation by reducing chromium interference.	Xu R, Wu K, Han H, Ling Z, Chen Z, Liu P, Xiong J, Tian F, Zafar Y, Malik K, Li X.	Chemosphere	10.1016/j.chemosphere.2018.08.061	2018
	The absence of the RecN protein suppresses the cellular defects of Deinococcus radiodurans irradiated cells devoid of the PprA protein by limiting recombinational repair of DNA lesions.	Devigne A, Meyer L, de la Tour CB, Eugenie N, Sommer S, Servant P.	DNA Repair (Amst)	10.1016/j.dnarep.2018.11.011	2019
	Super-resolution confocal cryo-CLEM with cryo-FIB milling for in situ imaging of Deinococcus radiodurans.	Sexton DL, Burgold S, Schertel A, Tocheva EI.	Curr Res Struct Biol	10.1016/j.crstbi.2021.12.001	2022
Metabolism	Fully Quantum Chemical Treatment of Chromophore-Protein Interactions in Phytochromes.	Gonzalez R, Mroginski MA.	J Phys Chem B	10.1021/acs.jpcb.9b08938	2019
	Borrelia burgdorferi radiosensitivity and Mn antioxidant content: antigenic preservation and pathobiology.	Londono AF, Sharma A, Sealy J, Rana VS, Foor SD, Matrosova VY, Gaidamakova EK, Volpe RP, Daly MJ, Hoffman BM, Pal U, Dumler JS.	mBio	10.1128/mbio.03131-24	2025
	Protein control of photochemistry and transient intermediates in phytochromes.	Salvadori G, Macaluso V, Pellicci G, Cupellini L, Granucci G, Mennucci B.	Nat Commun	10.1038/s41467-022-34640-8	2022
	Molecular Elucidation of a Urate Oxidase from Deinococcus radiodurans for Hyperuricemia and Gout Therapy.	Chiu YC, Hsu TS, Huang CY, Hsu CH.	Int J Mol Sci	10.3390/ijms22115611	2021
	Combined pre-treatments effects on zucchini (Cucurbita pepo L.) squash microbial load reduction.	Neves FIG, Silva CLM, Vieira MC.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2019.108257	2019
	A new age in structural S-layer biology: Experimental and in silico milestones.	Grill-Walcher S, Schaffer C.	J Biol Chem	10.1016/j.jbc.2025.110205	2025
Metabolism	Deinococcus radiodurans' SRA-HNH domain containing protein Shp (Dr1533) is involved in faithful genome inheritance maintenance following DNA damage.	Ferrandi A, Castani F, Pitaro M, Tagliaferri S, de la Tour CB, Alduina R, Sommer S, Fasano M, Barbieri P, Mancini M, Bonapace IM.	Biochim Biophys Acta Gen Subj	10.1016/j.bbagen.2018.09.020	2019
	Transient IR spectroscopy identifies key interactions and unravels new intermediates in the photocycle of a bacterial phytochrome.	Kubel J, Chenchiliyan M, Ooi SA, Gustavsson E, Isaksson L, Kuznetsova V, Ihalainen JA, Westenhoff S, Maj M.	Phys Chem Chem Phys	10.1039/c9cp06995j	2020
Metabolism	Manganese is a Deinococcus radiodurans growth limiting factor in rich culture medium.	Borsetti F, Dal Piaz F, D'Alessio F, Stefan A, Brandimarti R, Sarkar A, Datta A, Monton Silva A, den Blaauwen T, Alberto M, Spisni E, Hochkoeppler A.	Microbiology (Reading)	10.1099/mic.0.000698	2018
Metabolism	Computational protein design and protein-ligand interaction studies for the improvement of organophosphorus degrading potential of Deinococcus radiodurans.	Manoharan P, Sridhar J.	J Mol Graph Model	10.1016/j.jmgm.2018.04.017	2018
	DRJAMM Is Involved in the Oxidative Resistance in Deinococcus radiodurans.	Cai J, Pan C, Zhao Y, Xu H, Tian B, Wang L, Hua Y.	Front Microbiol	10.3389/fmicb.2021.756867	2021
Biotechnology	Producing alcohol and salt stress tolerant strain of Saccharomyces cerevisiae by heterologous expression of pprI gene.	Hossein Helalat S, Bidaj S, Samani S, Moradi M.	Enzyme Microb Technol	10.1016/j.enzmictec.2019.01.008	2019
	Metabolic Engineering of Extremophilic Bacterium Deinococcus radiodurans for the Production of the Novel Carotenoid Deinoxanthin.	Jeong SW, Kim JH, Kim JW, Kim CY, Kim SY, Choi YJ.	Microorganisms	10.3390/microorganisms9010044	2020
	FtsK, a DNA Motor Protein, Coordinates the Genome Segregation and Early Cell Division Processes in Deinococcus radiodurans.	Mishra S, Misra HS, Kota S.	mBio	10.1128/mbio.01742-22	2022
Metabolism	Cleavage of molybdopterin synthase MoaD-MoaE linear fusion by JAMM/MPN⁺ domain containing metalloprotease DR0402 from Deinococcus radiodurans.	Yang YM, Won YB, Ji CJ, Kim JH, Ryu SH, Ok YH, Lee JW.	Biochem Biophys Res Commun	10.1016/j.bbrc.2018.05.117	2018
Enzymology	Structural basis for the unusual substrate specificity of unique two-domain M1 metallopeptidase.	Agrawal R, Goyal VD, Singh R, Kumar A, Jamdar SN, Kumar A, Makde RD.	Int J Biol Macromol	10.1016/j.ijbiomac.2019.12.239	2020
Enzymology	Arg-73 of the RNA endonuclease MazF in Salmonella enterica subsp. arizonae contributes to guanine and uracil recognition in the cleavage sequence.	Okabe T, Aoi R, Yokota A, Tamiya-Ishitsuka H, Jiang Y, Sasaki A, Tsuneda S, Noda N.	J Biol Chem	10.1016/j.jbc.2024.105636	2024
	EbfC/YbaB: A Widely Distributed Nucleoid-Associated Protein in Prokaryotes.	Cordeiro TFVB, Gontijo MTP, Jorge GP, Brocchi M.	Microorganisms	10.3390/microorganisms10101945	2022
Pathogenicity	Highly Water-Dispersed and Stable Deinoxanthin Nanocapsule for Effective Antioxidant and Anti-Inflammatory Activity.	Yu S, Kim S, Kim J, Kim JW, Kim SY, Yeom B, Kim H, Choi WII, Sung D.	Int J Nanomedicine	10.2147/ijn.s401808	2023
	Radioprotection of deinococcal exopolysaccharide BRD125 by regenerating hematopoietic stem cells.	Park HR, Lee JH, Ji HJ, Lim S, Ahn KB, Seo HS.	Front Oncol	10.3389/fonc.2022.898185	2022
	Coexisting properties of thermostability and ultraviolet radiation resistance in the main S-layer complex of Deinococcus radiodurans.	Farci D, Slavov C, Piano D.	Photochem Photobiol Sci	10.1039/c7pp00240h	2018
	Tersicoccus phoenicis (Actinobacteria), a spacecraft clean room isolate, exhibits dormancy.	Tirumalai M, Ali S, Fox GE, Widger W.	Microbiol Spectr	10.1128/spectrum.01692-25	2025
Pathogenicity	Transgenic soybean expressing Cry1Ab-Vip3A fusion protein confers broad-spectrum resistance to lepidopteran pest.	Pan Z, Zhu Y, Lin C, Tang M, Shen Z, Zheng T.	Plant Cell Rep	10.1007/s00299-025-03463-4	2025
	A novel DNA damage detection method based on a distinct DNA damage response system.	Zhong S, Song S, Wang L, Liu Y, Xu H, Wang L, Lu H, Hua Y.	Microb Biotechnol	10.1111/1751-7915.70008	2024
Metabolism	A Model for Manganese interaction with Deinococcus radiodurans proteome network involved in ROS response and defense.	Peana M, Chasapis CT, Simula G, Medici S, Zoroddu MA.	J Trace Elem Med Biol	10.1016/j.jtemb.2018.02.001	2018
Enzymology	Comparative study on tertiary contacts and folding of RNase P RNAs from a psychrophilic, a mesophilic/radiation-resistant, and a thermophilic bacterium.	Marszalkowski M, Werner A, Feltens R, Helmecke D, Gossringer M, Westhof E, Hartmann RK.	RNA	10.1261/rna.078735.121	2021
	cAMP-independent Crp homolog adds to the multi-layer regulatory network in Porphyromonas gingivalis.	Smiga M, Roszkiewicz E, Slezak P, Tracz M, Olczak T.	Front Cell Infect Microbiol	10.3389/fcimb.2025.1535009	2025
	Acquired Radioresistance Through Adaptive Evolution with Gamma Radiation as Selection Pressure: Increased Expression and Induction of Anti-Stress Genes	Saito T, Terato H.	Int J Mol Sci		2025
	Atypical Bacilliredoxin AbxC Plays a Role in Responding to Oxidative Stress in Radiation-Resistant Bacterium Deinococcus radiodurans.	Jeong S, Jung JH, Kim MK, de Groot A, Blanchard L, Ryu S, Bahn YS, Lim S.	Antioxidants (Basel)	10.3390/antiox10071148	2021
	First Isolation and Characterization of Bacteria from the Core's Cooling Pool of an Operating Nuclear Reactor.	Petit P, Hayoun K, Alpha-Bazin B, Armengaud J, Rivasseau C.	Microorganisms	10.3390/microorganisms11081871	2023
	Effects of Desiccation and Freezing on Microbial Ionizing Radiation Survivability: Considerations for Mars Sample Return.	Horne WH, Volpe RP, Korza G, DePratti S, Conze IH, Shuryak I, Grebenc T, Matrosova VY, Gaidamakova EK, Tkavc R, Sharma A, Gostincar C, Gunde-Cimerman N, Hoffman BM, Setlow P, Daly MJ.	Astrobiology	10.1089/ast.2022.0065	2022
	A Small Epitope Tagging on the C-Terminus of a Target Protein Requires Extra Amino Acids to Enhance the Immune Responses of the Corresponding Antibody.	Lee K, Cho MH, Kim MJ, Bhoo SH.	J Microbiol Biotechnol	10.4014/jmb.2401.01036	2024
Enzymology	Single-Molecule Insights into ATP-Dependent Conformational Dynamics of Nucleoprotein Filaments of Deinococcus radiodurans RecA.	Alekseev A, Cherevatenko G, Serdakov M, Pobegalov G, Yakimov A, Bakhlanova I, Baitin D, Khodorkovskii M.	Int J Mol Sci	10.3390/ijms21197389	2020
Metabolism	Deinococcus radiodurans DR1088 is a novel RecF-interacting protein that stimulates single-stranded DNA annealing.	Cheng K, Xu G, Xu H, Zhao Y, Hua Y.	Mol Microbiol	10.1111/mmi.13828	2017
Genetics	Intracellular Flux Prediction of Recombinant Escherichia coli Producing Gamma-Aminobutyric Acid.	Bae SH, Sim MS, Jeong KJ, He D, Kwon I, Kim TW, Kim HU, Choi JI.	J Microbiol Biotechnol	10.4014/jmb.2312.12022	2024
Metabolism	Reaction Intermediates of Nitric Oxide Synthase from Deinococcus radiodurans as Revealed by Pulse Radiolysis: Evidence for Intramolecular Electron Transfer from Biopterin to Fe^II-O₂ Complex.	Tsutsui Y, Kobayashi K, Takeuchi F, Tsubaki M, Kozawa T.	Biochemistry	10.1021/acs.biochem.7b00887	2018
	Traits of Bathy Phytochromes and Application to Bacterial Optogenetics.	Bohm C, Lehtinen K, Multamaki E, Vanhatalo R, Brander O, Meier SSM, Rumfeldt J, Moglich A, Takala H.	ACS Synth Biol	10.1021/acssynbio.5c00337	2025
	Deinococcus radiodurans Exopolysaccharide Inhibits Staphylococcus aureus Biofilm Formation.	Chen F, Zhang J, Ji HJ, Kim MK, Kim KW, Choi JI, Han SH, Lim S, Seo HS, Ahn KB.	Front Microbiol	10.3389/fmicb.2021.712086	2021
	Crystal structure of a novel prolidase from Deinococcus radiodurans identifies new subfamily of bacterial prolidases.	Are VN, Jamdar SN, Ghosh B, Goyal VD, Kumar A, Neema S, Gadre R, Makde RD.	Proteins	10.1002/prot.25389	2017
	Effects of small heat shock proteins from thermotolerant bacteria on the stress resistance of Escherichia coli to temperature, pH, and hyperosmolarity.	Sato Y, Okano K, Honda K.	Extremophiles	10.1007/s00792-023-01326-y	2024
Metabolism	Functionalized Gold and Silver Bimetallic Nanoparticles Using Deinococcus radiodurans Protein Extract Mediate Degradation of Toxic Dye Malachite Green.	Weng Y, Li J, Ding X, Wang B, Dai S, Zhou Y, Pang R, Zhao Y, Xu H, Tian B, Hua Y.	Int J Nanomedicine	10.2147/ijn.s236683	2020
	Structural and Biochemical Analysis of the Recombination Mediator Protein RecR from Campylobacter jejuni.	Lee SJ, Ahn SY, Oh HB, Kim SY, Song WS, Yoon SI.	Int J Mol Sci	10.3390/ijms241612947	2023
	Application Progress of Deinococcus radiodurans in Biological Treatment of Radioactive Uranium-Containing Wastewater.	Li S, Zhu Q, Luo J, Shu Y, Guo K, Xie J, Xiao F, He S.	Indian J Microbiol	10.1007/s12088-021-00969-9	2021
	A novel ADP-directed chaperone function facilitates the ATP-driven motor activity of SARS-CoV helicase.	Yu J, Im H, Cho H, Jeon Y, Lee JB, Lee G.	Nucleic Acids Res	10.1093/nar/gkaf034	2025
Enzymology	Catalytic triad heterogeneity in S51 peptidase family: Structural basis for functional variability.	Yadav P, Goyal VD, Chandravanshi K, Kumar A, Gokhale SM, Jamdar SN, Makde RD.	Proteins	10.1002/prot.25693	2019
	Extremophilic Solutions: The Role of Deinoxanthin in Counteracting UV-Induced Skin Harm.	Kuzucu M.	Curr Issues Mol Biol	10.3390/cimb45100528	2023
	Peptide Bond Formation between Aminoacyl-Minihelices by a Scaffold Derived from the Peptidyl Transferase Center.	Kawabata M, Kawashima K, Mutsuro-Aoki H, Ando T, Umehara T, Tamura K.	Life (Basel)	10.3390/life12040573	2022
Metabolism	Proteome dynamics during post-desiccation recovery reveal convergence of desiccation and gamma radiation stress response pathways in Deinococcus radiodurans.	Ujaoney AK, Padwal MK, Basu B.	Biochim Biophys Acta Proteins Proteom	10.1016/j.bbapap.2017.06.014	2017
Metabolism	UV-Vis Spectroscopy Reveals a Correlation Between Y263 and BV Protonation States in Bacteriophytochromes.	Rumfeldt JA, Takala H, Liukkonen A, Ihalainen JA.	Photochem Photobiol	10.1111/php.13095	2019
Metabolism	Characterization and role of a 2',3'-cyclic phosphodiesterase from Deinococcus radiodurans.	Han W, Zhou C, Cheng J, Pan M, Hua Y, Zhao Y.	Biotechnol Lett	10.1007/s10529-017-2349-7	2017
	Structures of myxobacterial phytochrome revealed by cryo-EM using the Spotiton technique and with x-ray crystallography	Karki P, Menendez D, Budell W, Dangi S, Hernandez C, Mendez J, Muniyappan S, Basu S, Schwander P, Malla T, Stojkovic E, Schmidt M.	Struct Dyn		2025
	Coordination of the biliverdin D-ring in bacteriophytochromes.	Lenngren N, Edlund P, Takala H, Stucki-Buchli B, Rumfeldt J, Peshev I, Hakkanen H, Westenhoff S, Ihalainen JA.	Phys Chem Chem Phys	10.1039/c8cp01696h	2018
	Pleiotropic roles of late embryogenesis abundant proteins of Deinococcus radiodurans against oxidation and desiccation.	Liu Y, Zhang C, Wang Z, Lin M, Wang J, Wu M.	Comput Struct Biotechnol J	10.1016/j.csbj.2021.05.051	2021
	The peptidoglycan of Borrelia burgdorferi can persist in discrete tissues and cause systemic responses consistent with chronic illness.	McClune ME, Ebohon O, Dressler JM, Davis MM, Tupik JD, Lochhead RB, Booth CJ, Steere AC, Jutras BL.	Sci Transl Med	10.1126/scitranslmed.adr2955	2025
Metabolism	In vitro affinity of Deinococcus radiodurans MutS towards mismatched DNA exceeds that of its orthologues from Escherichia coli and Thermus thermophilus.	Banasik M, Stanislawska-Sachadyn A, Hildebrandt E, Sachadyn P.	J Biotechnol	10.1016/j.jbiotec.2017.05.010	2017
	Structural and Biochemical Characterization of Thioredoxin-2 from Deinococcus radiodurans.	Kim MK, Zhao L, Jeong S, Zhang J, Jung JH, Seo HS, Choi JI, Lim S.	Antioxidants (Basel)	10.3390/antiox10111843	2021
	Hypothesis that ancestral eukaryotes sexually proliferated without kinetochores or mitosis.	Akiyoshi B.	J Cell Sci	10.1242/jcs.263843	2025
	Characterization of ori and parS-like functions in secondary genome replicons in Deinococcus radiodurans.	Maurya GK, Misra HS.	Life Sci Alliance	10.26508/lsa.202000856	2021
	Disentangling Unusual Catalytic Properties and the Role of the [4Fe-4S] Cluster of Three Endonuclease III from the Extremophile D. radiodurans.	Rollo F, Borges PT, Silveira CM, Rosa MTG, Todorovic S, Moe E.	Molecules	10.3390/molecules27134270	2022
Genetics	Molecular insight into the PCNA-binding mode of FBH1.	Liu J, Chaves-Arquero B, Wei P, Tencer AH, Ruiz-Albor A, Zhang G, Blanco FJ, Kutateladze TG.	Structure	10.1016/j.str.2023.03.004	2023
	Engineering bacterial cell morphology for the design of robust cell factories.	Lubbers M, Jaspers N, Claessen D.	Biochem Biophys Rep	10.1016/j.bbrep.2025.102076	2025
	Recombinase-Controlled Multiphase Condensates Accelerate Nucleic Acid Amplification and CRISPR-Based Diagnostics.	Homchan A, Patchsung M, Chantanakool P, Wongsatit T, Onchan W, Muengsaen D, Thaweeskulchai T, Tandean M, Sakpetch T, Suraritdechachai S, Aphicho K, Panchai C, Taiwan S, Horthongkham N, Sudyoadsuk T, Reinhardt A, Uttamapinant C.	J Am Chem Soc	10.1021/jacs.4c11893	2025
	In vitro reconstitution of an efficient nucleotide excision repair system using mesophilic enzymes from Deinococcus radiodurans.	Seck A, De Bonis S, Saint-Pierre C, Gasparutto D, Ravanat JL, Timmins J.	Commun Biol	10.1038/s42003-022-03064-x	2022
	High-altitude balloon platform for studying the biological response of living organisms exposed to near-space environments.	Klomchitcharoen S, Wechakarn P, Tangwattanasirikun T, Smerwong N, Netrapathompornkij P, Chatmeeboon T, Nangsue N, Thitasirivit V, Kaweewongsunthorn K, Piyanopharoj S, Phumiprathet P, Wongsawat Y.	Heliyon	10.1016/j.heliyon.2024.e27406	2024
Metabolism	High-coverage proteomics reveals methionine auxotrophy in Deinococcus radiodurans.	Zhou Y, Shen P, Lan Q, Deng C, Zhang Y, Li Y, Wei W, Wang Y, Su N, He F, Xie Q, Lyu Z, Yang D, Xu P.	Proteomics	10.1002/pmic.201700072	2017
	Synonymous rpsH variants: the common denominator in Escherichia coli adapting to ionizing radiation.	Stemwedel K, Haase N, Christ S, Bogdanova NV, Rudorf S.	NAR Genom Bioinform	10.1093/nargab/lqae110	2024
Metabolism	Extremely high intracellular concentration of glucose-6-phosphate and NAD(H) in Deinococcus radiodurans.	Yamashiro T, Murata K, Kawai S.	Extremophiles	10.1007/s00792-016-0913-z	2017
	Structures and activities of widely conserved small prokaryotic aminopeptidases-P clarify classification of M24B peptidases.	Are VN, Kumar A, Goyal VD, Gotad SS, Ghosh B, Gadre R, Jamdar SN, Makde RD.	Proteins	10.1002/prot.25641	2019
	High Proportions of Radiation-Resistant Strains in Culturable Bacteria from the Taklimakan Desert.	Liu Y, Chen T, Li J, Wu M, Liu G, Zhang W, Zhang B, Zhang S, Zhang G.	Biology (Basel)	10.3390/biology11040501	2022
	Effects of Conserved Wedge Domain Residues on DNA Binding Activity of Deinococcus radiodurans RecG Helicase.	Jeong SW, Kim MK, Zhao L, Yang SK, Jung JH, Lim HM, Lim S.	Front Genet	10.3389/fgene.2021.634615	2021
	Development of bright red-shifted miRFP704nano using structural analysis of miRFPnano proteins.	Oliinyk OS, Pletnev S, Baloban M, Verkhusha VV.	Protein Sci	10.1002/pro.4709	2023
	Evolution and classification of Ser/Thr phosphatase PP2C family in bacteria: Sequence conservation, structures, domain distribution.	Li H, Li R, Yu H, Zhang Y, Feng H.	PLoS One	10.1371/journal.pone.0322880	2025
	Metabolites derived from bacterial isolates of the human skin microbiome inhibit Staphylococcus aureus biofilm formation.	Le VH, King T, Wuerzberger B, Bauer OR, Carver MN, Chan TS, Henson AL, Hubbard GK, Kopadze T, Patterson CF, McGraw SM, O'Hara A, Yarkosky EJ, LaMontagne MG, Hotze EM, Ferreira RBR.	Microbiol Spectr	10.1128/spectrum.01306-25	2025
	The structural effect between the output module and chromophore-binding domain is a two-way street via the hairpin extension.	Kurttila M, Etzl S, Rumfeldt J, Takala H, Galler N, Winkler A, Ihalainen JA.	Photochem Photobiol Sci	10.1007/s43630-022-00265-5	2022
Metabolism	Metabolic engineering of Deinococcus radiodurans for pinene production from glycerol.	Helalat SH, Jers C, Bebahani M, Mohabatkar H, Mijakovic I.	Microb Cell Fact	10.1186/s12934-021-01674-4	2021
	Structural and functional analyses of the echinomycin resistance conferring protein Ecm16 from Streptomyces lasalocidi.	Gade P, Erlandson A, Ullah A, Chen X, Mathews II, Mera PE, Kim CY.	Sci Rep	10.1038/s41598-023-34437-9	2023
	Enhancing adoptive cell therapy: future strategies for immune cell radioprotection in neuro-oncology.	Groth AJ, Khasraw M, Byrne JD, Reitman ZJ.	NPJ Precis Oncol	10.1038/s41698-025-01059-5	2025
	Proximity of Radiation Desiccation Response Motif to the core promoter is essential for basal repression as well as gamma radiation-induced gyrB gene expression in Deinococcus radiodurans.	Anaganti N, Basu B, Mukhopadhyaya R, Apte SK.	Gene	10.1016/j.gene.2017.03.002	2017
Metabolism	[Antioxidant function of the iron binding protein DRA0258 in Deinococcus radiodurans]	Yang S, Liu M, Wang L, Hua Y.	Wei Sheng Wu Xue Bao		2017
	Superflare Ultraviolet Impact on Kepler-96 System: A Glimpse of Habitability When the Ozone Layer First Formed on Earth.	Estrela R, Valio A.	Astrobiology	10.1089/ast.2017.1724	2018
Metabolism	Identification and Functional Analysis of RelA/SpoT Homolog (RSH) Genes in Deinococcus radiodurans.	Wang J, Tian Y, Zhou Z, Zhang L, Zhang W, Lin M, Chen M.	J Microbiol Biotechnol	10.4014/jmb.1601.01017	2016
	Quorum sensing in biofilm-mediated heavy metal resistance and transformation: environmental perspectives and bioremediation.	Mondal S, Melzi A, Zecchin S, Cavalca L.	Front Microbiol	10.3389/fmicb.2025.1607370	2025
	Nonlinear optical properties of photosensory core modules of monomeric and dimeric bacterial phytochromes.	Galiakhmetova D, Koviarov A, Dremin V, Gric T, Stoliarov D, Gorodetsky A, Maimaris M, Shcherbakova DM, Baloban M, Verkhusha VV, Sokolovski SG, Rafailov E.	Protein Sci	10.1002/pro.70118	2025
	Upregulation of Canthaxanthin Biosynthesis by Paracoccus bogoriensis PH1 from Hot-Spring Origin via Sustainable Fermentation Strategy in Laboratory-Scale Bioreactor.	Inyoo A, Pinmanee P, Thongkred P, Wongratpanya K, Kanokrung A, Watanadilok R, Pekkoh J, Pumas C, Sattayawat P, Bovonsombut S, Pathom-Aree W, Nimchua T, Chitov T.	Biology (Basel)	10.3390/biology14101334	2025
	Structural and molecular mechanisms of an Ro60 homolog from a Thermus bacteriophage.	Hu Z, Jin Z, Guo L, Zeng L, Dong X, Jiang L, Dai W, Ma J, Huang Y.	Nucleic Acids Res	10.1093/nar/gkaf470	2025
	Evaluation of methods for the reduction of contaminating host reads when performing shotgun metagenomic sequencing of the milk microbiome.	Yap M, Feehily C, Walsh CJ, Fenelon M, Murphy EF, McAuliffe FM, van Sinderen D, O'Toole PW, O'Sullivan O, Cotter PD.	Sci Rep	10.1038/s41598-020-78773-6	2020
Metabolism	Regulation of transcription initiation by Gfh factors from Deinococcus radiodurans.	Agapov A, Esyunina D, Pupov D, Kulbachinskiy A.	Biochem J	10.1042/bcj20160659	2016
	Targeting Hsp20 Using the Novel Small Non-coding RNA DnrH Regulates Heat Tolerance in Deinococcus radiodurans.	Xue D, Chen Y, Li J, Han J, Liu Y, Jiang S, Zhou Z, Zhang W, Chen M, Lin M, Ongena M, Wang J.	Front Microbiol	10.3389/fmicb.2019.02354	2019
	Gfh factors and NusA cooperate to stimulate transcriptional pausing and termination.	Agapov A, Olina A, Esyunina D, Kulbachinskiy A.	FEBS Lett	10.1002/1873-3468.12609	2017
	Manganese binding to antioxidant peptides involved in extreme radiation resistance in Deinococcus radiodurans.	Peana M, Medici S, Pangburn HA, Lamkin TJ, Ostrowska M, Gumienna-Kontecka E, Zoroddu MA.	J Inorg Biochem	10.1016/j.jinorgbio.2016.08.012	2016
Enzymology	Production, optimization and characterization of esterase isolated from a new endophytic Trichoderma afroharzianum strain AUMC 16,433 and its applications in dye decolorization.	Mahmoud YA, Alamin NS, Mohamed TM, El-Zawawy NA, Salem MM.	Microb Cell Fact	10.1186/s12934-025-02832-8	2025
	Gold Nanoparticles Biosynthesized and Functionalized Using a Hydroxylated Tetraterpenoid Trigger Gene Expression Changes and Apoptosis in Cancer Cells.	Tian B, Li J, Pang R, Dai S, Li T, Weng Y, Jin Y, Hua Y.	ACS Appl Mater Interfaces	10.1021/acsami.8b09206	2018
	A Novel Deinococcus Antioxidant Peptide Mitigates Oxidative Stress in Irradiated CHO-K1 Cells.	Lim S, Song HY, Park HR, Ahn KB.	Microorganisms	10.3390/microorganisms12112161	2024
Pathogenicity	Low concentrations of ethanol during irradiation drastically reduce DNA damage caused by very high doses of ionizing radiation.	Singh H, Apte SK.	J Biosci	10.1007/s12038-018-9739-4	2018
	Oxidative stress-mediated genotoxic effect of zinc oxide nanoparticles on Deinococcus radiodurans.	Singh R, Cheng S, Singh S.	3 Biotech	10.1007/s13205-020-2054-4	2020
	MazEF Toxin-Antitoxin System-Mediated DNA Damage Stress Response in Deinococcus radiodurans.	Dai J, Chen Z, Hou J, Wang Y, Guo M, Cao J, Wang L, Xu H, Tian B, Zhao Y.	Front Genet	10.3389/fgene.2021.632423	2021
	In situ real-time evaluation of radiation-responsive promoters in the extremely radioresistant microbe Deinococcus radiodurans.	Anaganti N, Basu B, Apte SK.	J Biosci	10.1007/s12038-016-9608-y	2016
	Delivery and adjuvant: liposomes for SARS-CoV-2 vaccines.	Negari IP, Khoerunnisa AN, Tarwadi, Sari AN, Chuang TH.	BioTechnologia (Pozn)	10.5114/bta/207680	2025
	Discovery of reversing enzymes for RNA ADP-ribosylation reveals a possible defence module against toxic attack.	Lu Y, Schuller M, Bullen NP, Mikolcevic P, Zonjic I, Raggiaschi R, Mikoc A, Whitney JC, Ahel I.	Nucleic Acids Res	10.1093/nar/gkaf069	2025
Metabolism	[Deinococcus radiodurans RecX and Escherichia coli RecX Proteins Are Able to Replace Each Other in vivo and in vitro].	Bakhlanova IV, Baitin DM.	Genetika	10.1134/s1022795416030030	2016
	SAXS Structural Studies of Dps from Deinococcus radiodurans Highlights the Conformation of the Mobile N-Terminal Extensions.	Santos SP, Cuypers MG, Round A, Finet S, Narayanan T, Mitchell EP, Romao CV.	J Mol Biol	10.1016/j.jmb.2017.01.008	2017
	Salt tolerance conferred by expression of a global regulator IrrE from Deinococcus radiodurans in oilseed rape	Wang J, Guo C, Dai Q, Feng B, Zuo K, Lin M.	Mol Breed	10.1007/s11032-016-0486-7	2016
	Divisome and segrosome components of Deinococcus radiodurans interact through cell division regulatory proteins.	Maurya GK, Modi K, Misra HS.	Microbiology (Reading)	10.1099/mic.0.000330	2016
	Comparison of cysteine content in whole proteomes across the three domains of life.	Castillo-Villanueva A, Reyes-Vivas H, Oria-Hernandez J.	PLoS One	10.1371/journal.pone.0294268	2023
	A Novel Noncoding RNA dsr11 Involved in Heat Stress Tolerance in Deinococcus radiodurans.	Xue D, Chen Y, Li J, Han J, Zhou Z, Zhang W, Chen M, Lin M, Ongena M, Wang J.	Biomolecules	10.3390/biom10010022	2019
Metabolism	Deinococcus radiodurans DR2231 is a two-metal-ion mechanism hydrolase with exclusive activity on dUTP.	Mota CS, Goncalves AM, de Sanctis D.	FEBS J	10.1111/febs.13923	2016
Proteome	Comparative Proteomics Analysis Reveals New Features of the Oxidative Stress Response in the Polyextremophilic Bacterium Deinococcus radiodurans.	Gao L, Zhou Z, Chen X, Zhang W, Lin M, Chen M.	Microorganisms	10.3390/microorganisms8030451	2020
	Hybrid Structure of a Dynamic Single-Chain Carboxylase from Deinococcus radiodurans.	Hagmann A, Hunkeler M, Stuttfeld E, Maier T.	Structure	10.1016/j.str.2016.06.001	2016
	Experimental comparison of X-ray ptychographic and holographic nanotomography of metal-stained neuronal tissue.	Pacureanu A, Thies T, Bosch C, Holler M, Guizar-Sicairos M, Muller E, Reuteler J, Karpov D, Schaefer AT, Cloetens P, Menzel A, Diaz A.	Opt Express	10.1364/oe.563186	2025
	Exposure of Deinococcus radiodurans to both static magnetic fields and gamma radiation: observation of cell recuperation effects.	Righi H, Arruda-Neto JDT, Gomez JGC, da Silva LF, Somessari ESR, Lemos ACC.	J Biol Phys	10.1007/s10867-020-09554-5	2020
	Proteomic Response of Deinococcus radiodurans to Short-Term Real Microgravity during Parabolic Flight Reveals Altered Abundance of Proteins Involved in Stress Response and Cell Envelope Functions.	Moors KA, Ott E, Weckwerth W, Milojevic T.	Life (Basel)	10.3390/life12010023	2021
Metabolism	[Influence of expressing IrrE from Deinococcus radiodurans on osmotic stress tolerance of succinate-producing Escherichia coli].	Zhu X, Wu M, Ma J, Gao Y, Chen M, Jiang M.	Sheng Wu Gong Cheng Xue Bao	10.13345/j.cjb.160114	2016
Transcriptome	Transcriptome and nutritional composition analysis of stacked transgenic maize with insect resistance and herbicide tolerance.	Yu X, Gao H, Wang P.	GM Crops Food	10.1080/21645698.2025.2472451	2025
Enzymology	One-pot, two-step transaminase and transketolase synthesis of l-gluco-heptulose from l-arabinose.	Bawn M, Subrizi F, Lye GJ, Sheppard TD, Hailes HC, Ward JM.	Enzyme Microb Technol	10.1016/j.enzmictec.2018.05.006	2018
Metabolism	Mechanisms of Stress Resistance and Gene Regulation in the Radioresistant Bacterium Deinococcus radiodurans.	Agapov AA, Kulbachinskiy AV.	Biochemistry (Mosc)	10.1134/s0006297915100016	2015
Metabolism	The Metabolic and Physiological Responses to Spaceflight of a Lipopeptide-Producing Bacillus subtilis.	Qin WQ, Liu YF, Liu JF, Zhou L, Yang SZ, Gu JD, Mu BZ.	Microb Biotechnol	10.1111/1751-7915.70111	2025
Metabolism	The Novel ncRNA OsiR Positively Regulates Expression of katE2 and Is Required for Oxidative Stress Tolerance in Deinococcus radiodurans.	Gao L, Chen X, Tian Y, Yan Y, Zhan Y, Zhou Z, Zhang W, Lin M, Chen M.	Int J Mol Sci	10.3390/ijms21093200	2020
	Never Cared for What They Do: High Structural Stability of Guanine-Quadruplexes in the Presence of Strand-Break Damage.	Miclot T, Hognon C, Bignon E, Terenzi A, Grandemange S, Barone G, Monari A.	Molecules	10.3390/molecules27103256	2022
Metabolism	Proteomic insights into the functional basis for the response regulator DrRRA of Deinococcus radiodurans.	Wang L, Hu J, Liu M, Yang S, Zhao Y, Cheng K, Xu G, Li M, Tian B, Hua Y.	Int J Radiat Biol	10.3109/09553002.2016.1150618	2016
	RecA deletion disrupts protein homeostasis, leading to deamidation, oxidation, and impaired glycolysis in Cronobacter sakazakii.	Lu P, Xue J, Ji X.	Appl Environ Microbiol	10.1128/aem.01971-24	2025
	Immuno-affinity purification of 2B8-tagged proteins	Choi H, Kim TL, Cho Mh, Bhoo SH.	Han'guk ?ngyong Saengmy?ng Hwahakhoe chi =.		2017
Metabolism	Putative DNA modification methylase DR_C0020 of Deinococcus radiodurans is an atypical SAM dependent C-5 cytosine DNA methylase.	Patil NA, Basu B, Deobagkar DD, Apte SK, Deobagkar DN.	Biochim Biophys Acta Gen Subj	10.1016/j.bbagen.2016.12.025	2017
Metabolism	PprM is necessary for up-regulation of katE1, encoding the major catalase of Deinococcus radiodurans, under unstressed culture conditions.	Jeong SW, Seo HS, Kim MK, Choi JI, Lim HM, Lim S.	J Microbiol	10.1007/s12275-016-6175-8	2016
	Chromophore-Protein Interplay during the Phytochrome Photocycle Revealed by Step-Scan FTIR Spectroscopy.	Ihalainen JA, Gustavsson E, Schroeder L, Donnini S, Lehtivuori H, Isaksson L, Thoing C, Modi V, Berntsson O, Stucki-Buchli B, Liukkonen A, Hakkanen H, Kalenius E, Westenhoff S, Kottke T.	J Am Chem Soc	10.1021/jacs.8b04659	2018
Genetics	Experimental evolution of extremophile resistance to ionizing radiation.	Bruckbauer ST, Cox MM.	Trends Genet	10.1016/j.tig.2021.04.011	2021
Metabolism	Expression of lycopene biosynthesis genes fused in line with Shine-Dalgarno sequences improves the stress-tolerance of Lactococcus lactis.	Dong X, Wang Y, Yang F, Zhao S, Tian B, Li T.	Biotechnol Lett	10.1007/s10529-016-2220-2	2017
Genetics	Lost and Found: Re-searching and Re-scoring Proteomics Data Aids Genome Annotation and Improves Proteome Coverage.	Willems P, Fijalkowski I, Van Damme P.	mSystems	10.1128/msystems.00833-20	2020
Genetics	Adaptive laboratory evolution of Micrococcus luteus and identification of genes associated with radioresistance through genome-wide association study.	Tang T, Li R, Li H, Feng H.	Sci Rep	10.1038/s41598-025-90434-0	2025
	Multiplexing light-inducible recombinases to control cell fate, Boolean logic, and cell patterning in mammalian cells.	Tous C, Kinstlinger IS, Rice MEL, Deng J, Wong WW.	Sci Adv	10.1126/sciadv.adt1971	2025
	YRNAs: biosynthesis, structure, functions and involvment in cancer development.	Campo A, Aliquo F, Velletri T, Campo S.	Discov Oncol	10.1007/s12672-025-01957-x	2025
Metabolism	Deinococcus Mn²⁺-peptide complex: A novel approach to alphavirus vaccine development.	Gayen M, Gupta P, Morazzani EM, Gaidamakova EK, Knollmann-Ritschel B, Daly MJ, Glass PJ, Maheshwari RK.	Vaccine	10.1016/j.vaccine.2017.05.016	2017
Metabolism	CYP287A1 is a carotenoid 2-beta-hydroxylase required for deinoxanthin biosynthesis in Deinococcus radiodurans R1.	Zhou Z, Zhang W, Su S, Chen M, Lu W, Lin M, Molnar I, Xu Y.	Appl Microbiol Biotechnol	10.1007/s00253-015-6910-9	2015
Enzymology	The members of M20D peptidase subfamily from Burkholderia cepacia, Deinococcus radiodurans and Staphylococcus aureus (HmrA) are carboxydipeptidases, primarily specific for Met-X dipeptides.	Jamdar SN, Are VN, Navamani M, Kumar S, Nagar V, Makde RD.	Arch Biochem Biophys	10.1016/j.abb.2015.10.003	2015
	Degradation Mechanism of Aflatoxin M₁ by Recombinant Catalase from Bacillus pumilusE-1-1-1: Food Applications in Milk and Beer.	Liu X, Zhao F, Wang X, Peng K, Kang C, Sang Y.	Foods	10.3390/foods13060888	2024
Metabolism	The three catalases in Deinococcus radiodurans: Only two show catalase activity.	Jeong SW, Jung JH, Kim MK, Seo HS, Lim HM, Lim S.	Biochem Biophys Res Commun	10.1016/j.bbrc.2015.12.017	2016
	Boosting Biocatalytic Efficiency: Engineering of Chitinase Chit33 with Chitin and Cellulose Binding Domains for Sustainable Chitin Conversion.	Martinez-Ranz M, Kidibule PE, Jimenez-Ortega E, Valcarcel J, Vazquez JA, Sanz-Aparicio J, Fernandez-Lobato M.	J Agric Food Chem	10.1021/acs.jafc.4c10364	2025
Enzymology	Topoisomerase IB of Deinococcus radiodurans resolves guanine quadruplex DNA structures in vitro.	Kota S, Misra HS.	J Biosci	10.1007/s12038-015-9571-z	2015
Genetics	Structural and Functional Characterization of a Unique AP Endonuclease From Deinococcus radiodurans.	He Y, Wang Y, Qin C, Xu Y, Cheng K, Xu H, Tian B, Zhao Y, Wang L, Hua Y.	Front Microbiol	10.3389/fmicb.2020.01178	2020
Metabolism	Serine/threonine protein kinase mediates rifampicin resistance in Brucella melitensis through interacting with ribosomal protein RpsD and affecting antioxidant capacity.	Yuan Y, Ning W, Chen J, Li J, Xue T, An C, Mao L, Zhang G, Zhou S, Ding J, Yang X, Ye J.	mSystems	10.1128/msystems.01109-24	2025
Metabolism	DNA Gyrase of Deinococcus radiodurans is characterized as Type II bacterial topoisomerase and its activity is differentially regulated by PprA in vitro.	Kota S, Rajpurohit YS, Charaka VK, Satoh K, Narumi I, Misra HS.	Extremophiles	10.1007/s00792-016-0814-1	2016
	Biological Mitigation of Antibiotic Resistance Gene Dissemination by Antioxidant-Producing Microorganisms in Activated Sludge Systems.	Ren CY, Wu EL, Hartmann EM, Zhao HP.	Environ Sci Technol	10.1021/acs.est.1c04641	2021
Enzymology	Purification and Characterization of Recombinant Deinococcus radiodurans RNA Polymerase.	Esyunina DM, Kulbachinskiy AV.	Biochemistry (Mosc)	10.1134/s0006297915100077	2015
Metabolism	Autoinducer-2 signaling is involved in regulation of stress-related genes of Deinococcus radiodurans.	Lin L, Li T, Dai S, Yu J, Chen X, Wang L, Wang Y, Hua Y, Tian B.	Arch Microbiol	10.1007/s00203-015-1163-7	2016
	Crude Cell-Free Extract From Deinococcus radiodurans Exhibit Anticancer Activity by Inducing Apoptosis in Triple-Negative Breast Cancer Cells.	Maqbool I, Sudharsan M, Kanimozhi G, Alrashood ST, Khan HA, Prasad NR.	Front Cell Dev Biol	10.3389/fcell.2020.00707	2020
Metabolism	Antioxidant Activities of an Exopolysaccharide (DeinoPol) Produced by the Extreme Radiation-Resistant Bacterium Deinococcus radiodurans.	Lin SM, Baek CY, Jung JH, Kim WS, Song HY, Lee JH, Ji HJ, Zhi Y, Kang BS, Bahn YS, Seo HS, Lim S.	Sci Rep	10.1038/s41598-019-56141-3	2020
Enzymology	S-layer proteins as a source of carotenoids: Isolation of the carotenoid cofactor deinoxanthin from its S-layer protein DR_2577.	Farci D, Esposito F, El Alaoui S, Piano D.	Food Res Int	10.1016/j.foodres.2016.10.003	2017
	TemStaPro: protein thermostability prediction using sequence representations from protein language models.	Pudziuvelyte I, Olechnovic K, Godliauskaite E, Sermokas K, Urbaitis T, Gasiunas G, Kazlauskas D.	Bioinformatics	10.1093/bioinformatics/btae157	2024
	A small RNA regulates pprM, a modulator of pleiotropic proteins promoting DNA repair, in Deinococcus radiodurans under ionizing radiation.	Villa JK, Han R, Tsai CH, Chen A, Sweet P, Franco G, Vaezian R, Tkavc R, Daly MJ, Contreras LM.	Sci Rep	10.1038/s41598-021-91335-8	2021
	Characterisation of sequence-structure-function space in sensor-effector integrators of phytochrome-regulated diguanylate cyclases.	Bohm C, Gourinchas G, Zweytick S, Hujdur E, Reiter M, Trstenjak S, Sensen CW, Winkler A.	Photochem Photobiol Sci	10.1007/s43630-022-00255-7	2022
	The Dps Protein Protects Escherichia coli DNA in the Form of the Trimer.	Kovalenko V, Tereshkina K, Moiseenko A, Ryzhykau YL, Kuklin AI, Tereshkin E, Zaytsev P, Generalova A, Persiyantseva N, Sokolova OS, Krupyanskii Y, Loiko N.	Int J Mol Sci	10.3390/ijms26020619	2025
	Enhancement of bioelectricity generation via heterologous expression of IrrE in Pseudomonas aeruginosa-inoculated MFCs.	Luo J, Wang T, Li X, Yang Y, Zhou M, Li M, Yan Z.	Biosens Bioelectron	10.1016/j.bios.2018.05.052	2018
Metabolism	DqsIR quorum sensing-mediated gene regulation of the extremophilic bacterium Deinococcus radiodurans in response to oxidative stress.	Lin L, Dai S, Tian B, Li T, Yu J, Liu C, Wang L, Xu H, Zhao Y, Hua Y.	Mol Microbiol	10.1111/mmi.13331	2016
Metabolism	Deinococcus radiodurans RecA nucleoprotein filaments characterized at the single-molecule level with optical tweezers.	Pobegalov G, Cherevatenko G, Alekseev A, Sabantsev A, Kovaleva O, Vedyaykin A, Morozova N, Baitin D, Khodorkovskii M.	Biochem Biophys Res Commun	10.1016/j.bbrc.2015.09.042	2015
	Microbiological Decontamination of Water: Improving the Solar Disinfection Technique (SODIS) with the Use of Nontoxic Vital Dye Methylene Blue.	Cardoso-Rurr JS, de Paiva JP, Paulino-Lima IG, de Alencar TAM, Lage CAS, Leitao AC.	Photochem Photobiol	10.1111/php.12999	2019
Metabolism	Surface (S)-layer proteins of Deinococcus radiodurans and their utility as vehicles for surface localization of functional proteins.	Misra CS, Basu B, Apte SK.	Biochim Biophys Acta	10.1016/j.bbamem.2015.09.021	2015
	Influence of water availability and temperature on estimates of microbial extracellular enzyme activity.	Gomez EJ, Delgado JA, Gonzalez JM.	PeerJ	10.7717/peerj.10994	2021
Biotechnology	Discovery and Characterization of Native Deinococcus radiodurans Promoters for Tunable Gene Expression.	Chen A, Sherman MW, Chu C, Gonzalez N, Patel T, Contreras LM.	Appl Environ Microbiol	10.1128/aem.01356-19	2019
	Expression of lycopene biosynthesis genes fused in line with Shine-Dalgarno sequences improves the stress-tolerance of Lactococcus lactis	Dong X, Wang Y, Yang F, Zhao S, Tian B, Li T.	Biotechnol Lett		2017
	Microbial hauberks: composition and function of surface layer proteins in gammaproteobacterial methanotrophs.	Hamilton R, Gebbie W, Bowman C, Mantanona A, Kalyuzhnaya MG.	Appl Environ Microbiol	10.1128/aem.01364-24	2025
Metabolism	Participation of RecJ in the base excision repair pathway of Deinococcus radiodurans.	Cheng K, Xu Y, Chen X, Lu H, He Y, Wang L, Hua Y.	Nucleic Acids Res	10.1093/nar/gkaa714	2020
Genetics	MarkerScan: Separation and assembly of cobionts sequenced alongside target species in biodiversity genomics projects.	Vancaester E, Blaxter ML.	Wellcome Open Res	10.12688/wellcomeopenres.20730.1	2024
Metabolism	The Site-Directed A184S Mutation in the HTH Domain of the Global Regulator IrrE Enhances Deinococcus radiodurans R1 Tolerance to UV Radiation and MMC Shock.	Zhang C, Zhou Z, Zhang W, Chen Z, Song Y, Lu W, Lin M, Chen M.	J Microbiol Biotechnol	10.4014/jmb.1507.07008	2015
Enzymology	drFrnE Represents a Hitherto Unknown Class of Eubacterial Cytoplasmic Disulfide Oxido-Reductases.	Bihani SC, Panicker L, Rajpurohit YS, Misra HS, Kumar V.	Antioxid Redox Signal	10.1089/ars.2016.6960	2018
Metabolism	The interplay between Mn and Fe in Deinococcus radiodurans triggers cellular protection during paraquat-induced oxidative stress.	Santos SP, Yang Y, Rosa MTG, Rodrigues MAA, De La Tour CB, Sommer S, Teixeira M, Carrondo MA, Cloetens P, Abreu IA, Romao CV.	Sci Rep	10.1038/s41598-019-53140-2	2019
Proteome	Proteome Damage Inflicted by Ionizing Radiation: Advancing a Theme in the Research of Miroslav Radman.	Bruckbauer ST, Minkoff BB, Sussman MR, Cox MM.	Cells	10.3390/cells10040954	2021
Metabolism	Structure determination of uracil-DNA N-glycosylase from Deinococcus radiodurans in complex with DNA.	Pedersen HL, Johnson KA, McVey CE, Leiros I, Moe E.	Acta Crystallogr D Biol Crystallogr	10.1107/s1399004715014157	2015
	Self-assembly of Deinococcus radiodurans supports nanocell scenario of life origin.	Bernadotte A, Semenova V, Musial VAM, Kasprzykowska A, Zubarev RA.	Discoveries (Craiova)	10.15190/d.2017.2	2017
	Composition and distribution of bacterial communities and potential radiation-resistant bacteria at different elevations in the eastern Pamirs.	Zhu J, Wang HN, Tang QY, Gu MY, Zhang ZD.	Front Microbiol	10.3389/fmicb.2024.1427806	2024
	Crystal Structure of the Recombination Mediator Protein RecO from Campylobacter jejuni and Its Interaction with DNA and a Zinc Ion.	Lee SJ, Oh HB, Yoon SI.	Int J Mol Sci	10.3390/ijms23179667	2022
Metabolism	[Biosorption of Radionuclide Uranium by Deinococcus radiodurans].	Yang J, Dong FQ, Dai QW, Liu MX, Nie XQ, Zhang D, Ma JL, Zhou X.	Guang Pu Xue Yu Guang Pu Fen Xi		2015
	Biotransformation-coupled mutasynthesis for the generation of novel pristinamycin derivatives by engineering the phenylglycine residue.	Hennrich O, Weinmann L, Kulik A, Harms K, Klahn P, Youn JW, Surup F, Mast Y.	RSC Chem Biol	10.1039/d3cb00143a	2023
Metabolism	Topoisomerase I (TOP1) dynamics: conformational transition from open to closed states.	Takahashi DT, Gadelle D, Agama K, Kiselev E, Zhang H, Yab E, Petrella S, Forterre P, Pommier Y, Mayer C.	Nat Commun	10.1038/s41467-021-27686-7	2022
	Evaluation of ketoclomazone and its analogues as inhibitors of 1-deoxy-d-xylulose 5-phosphate synthases and other thiamine diphosphate (ThDP)-dependent enzymes.	Chan AHY, Ho TCS, Fathoni I, Hamid R, Hirsch AKH, Saliba KJ, Leeper FJ.	RSC Med Chem	10.1039/d4md00083h	2024
Genetics	G-quadruplex forming structural motifs in the genome of Deinococcus radiodurans and their regulatory roles in promoter functions.	Kota S, Dhamodharan V, Pradeepkumar PI, Misra HS.	Appl Microbiol Biotechnol	10.1007/s00253-015-6808-6	2015
	Unraveling the pathway of copper delivery to cytochrome c oxidases in the free-living bacterium Caulobacter vibrioides.	Kasmo H, Abolia Tepusa J, Garcia-Dominguez R, Piette C, Dieu M, Devos D, Matroule JY.	J Biol Chem	10.1016/j.jbc.2025.110786	2025
	Identification of a novel monocyclic carotenoid and prediction of its biosynthetic genes in Algoriphagus sp. oki45.	Takatani N, Maoka T, Sawabe T, Beppu F, Hosokawa M.	Appl Microbiol Biotechnol	10.1007/s00253-023-12995-2	2024
	Systemic metabolic engineering of Enterobacter aerogenes for efficient 2,3-butanediol production.	Lu P, Bai R, Gao T, Chen J, Jiang K, Zhu Y, Lu Y, Zhang S, Xu F, Zhao H.	Appl Microbiol Biotechnol	10.1007/s00253-023-12911-8	2024
	Transcriptional and biochemical analyses of Planomicrobium strain AX6 from Qinghai-Tibetan Plateau, China, reveal hydrogen peroxide scavenging potential.	Bahadur A, Li T, Sajjad W, Nasir F, Zia MA, Wu M, Zhang G, Liu G, Chen T, Zhang W.	BMC Microbiol	10.1186/s12866-022-02677-w	2022
Metabolism	DNA adenine hypomethylation leads to metabolic rewiring in Deinococcus radiodurans.	Shaiwale NS, Basu B, Deobagkar DD, Deobagkar DN, Apte SK.	J Proteomics	10.1016/j.jprot.2015.05.036	2015
Genetics	A more significant role for insertion sequences in large-scale rearrangements in bacterial genomes.	Ngan WY, Parab L, Bertels F, Gallie J.	mBio	10.1128/mbio.03052-24	2025
	Biochemical and Structural Study of RuvC and YqgF from Deinococcus radiodurans.	Sun Y, Yang J, Xu G, Cheng K.	mBio	10.1128/mbio.01834-22	2022
Enzymology	Extracellular peptidases from Deinococcus radiodurans.	Dalmaso GZ, Lage CA, Mazotto AM, Dias EP, Caldas LA, Ferreira D, Vermelho AB.	Extremophiles	10.1007/s00792-015-0773-y	2015
	Sequence, structure, and function of the Dps DNA-binding protein from Deinococcus wulumuqiensis R12.	Chen Y, Yang Z, Zhou X, Jin M, Dai Z, Ming D, Zhang Z, Zhu L, Jiang L.	Microb Cell Fact	10.1186/s12934-022-01857-7	2022
Enzymology	Enhanced DNA binding affinity of RecA protein from Deinococcus radiodurans.	Warfel JD, LiCata VJ.	DNA Repair (Amst)	10.1016/j.dnarep.2015.05.002	2015
Metabolism	Engineered Deinococcus radiodurans R1 with NiCoT genes for bioremoval of trace cobalt from spent decontamination solutions of nuclear power reactors.	Gogada R, Singh SS, Lunavat SK, Pamarthi MM, Rodrigue A, Vadivelu B, Phanithi PB, Gopala V, Apte SK.	Appl Microbiol Biotechnol	10.1007/s00253-015-6761-4	2015
	Discovery of novel drug-like antitubercular hits targeting the MEP pathway enzyme DXPS by strategic application of ligand-based virtual screening.	Zhu D, Johannsen S, Masini T, Simonin C, Haupenthal J, Illarionov B, Andreas A, Awale M, Gierse RM, van der Laan T, van der Vlag R, Nasti R, Poizat M, Buhler E, Reiling N, Muller R, Fischer M, Reymond JL, Hirsch AKH.	Chem Sci	10.1039/d2sc02371g	2022
	Stress induction in the bacteria Shewanella oneidensis and Deinococcus radiodurans in response to below-background ionizing radiation.	Castillo H, Schoderbek D, Dulal S, Escobar G, Wood J, Nelson R, Smith G.	Int J Radiat Biol	10.3109/09553002.2015.1062571	2015
Pathogenicity	Depletion of reduction potential and key energy generation metabolic enzymes underlies tellurite toxicity in Deinococcus radiodurans.	Anaganti N, Basu B, Gupta A, Joseph D, Apte SK.	Proteomics	10.1002/pmic.201400113	2015
	Radiotolerant endophytic bacteria and analysis of the effects of ¹³⁷Cesium on the metabolome of Pantoea sp.	Dos Santos Oliveira JA, Polli AD, Ferreira AP, Lopes NB, Mangolim CA, Vicentini VEP, Polonio JC, Ramos AVG, Baldoqui DC, Pamphile JA, Azevedo JL.	Braz J Microbiol	10.1007/s42770-024-01458-z	2024
	Characterization and Comparative Genomic Analysis of a Deep-Sea Bacillus Phage Reveal a Novel Genus.	Chen Y, Zhang T, Lai Q, Zhang M, Yu M, Zeng R, Jin M.	Viruses	10.3390/v15091919	2023
Genetics	Engineering a New Generation of Gene Editors: Integrating Synthetic Biology and AI Innovations.	Chia BS, Seah YFS, Wang B, Shen K, Srivastava D, Chew WL.	ACS Synth Biol	10.1021/acssynbio.4c00686	2025
Metabolism	Spectroelectrochemical insights into structural and redox properties of immobilized endonuclease III and its catalytically inactive mutant.	Moe E, Rollo F, Silveira CM, Sezer M, Hildebrandt P, Todorovic S.	Spectrochim Acta A Mol Biomol Spectrosc	10.1016/j.saa.2017.06.050	2018
	Structural features and functional implications of proteins enabling the robustness of Deinococcus radiodurans.	Chen Z, Tang Y, Hua Y, Zhao Y.	Comput Struct Biotechnol J	10.1016/j.csbj.2020.09.036	2020
	The abundant and essential HU proteins in Deinococcus deserti and Deinococcus radiodurans are translated from leaderless mRNA.	Bouthier de la Tour C, Blanchard L, Dulermo R, Ludanyi M, Devigne A, Armengaud J, Sommer S, de Groot A.	Microbiology (Reading)	10.1099/mic.0.000186	2015
	The Ribosomal Protein uL22 Modulates the Shape of the Protein Exit Tunnel.	Wekselman I, Zimmerman E, Davidovich C, Belousoff M, Matzov D, Krupkin M, Rozenberg H, Bashan A, Friedlander G, Kjeldgaard J, Ingmer H, Lindahl L, Zengel JM, Yonath A.	Structure	10.1016/j.str.2017.06.004	2017
	Methylation of Ir(iii)-tetrazolato complexes: an effective route to modulate the emission outputs and to switch to antimicrobial properties.	Fiorini V, Zanoni I, Zacchini S, Costa AL, Hochkoeppler A, Zanotti V, Ranieri AM, Massi M, Stefan A, Stagni S.	Dalton Trans	10.1039/c7dt02352a	2017
	F-box DNA Helicase 1 (FBH1) Contributes to the Destabilization of DNA Damage Repair Machinery in Human Cancers.	Watson AJ, Shaffer ML, Bouley RA, Petreaca RC.	Cancers (Basel)	10.3390/cancers15184439	2023
Metabolism	Sec pathway influences the growth of Deinococcus radiodurans.	Wang L, Tan H, Cheng K, Li M, Xu X, Wang J, Hua Y.	Curr Microbiol	10.1007/s00284-014-0767-5	2015
	Improved biosynthesis and characteristics of silver nanoparticles using marine endophytic fungi exposed to hypo-osmotic stress.	Oliveira MAM, Calado ML, Guerreiro SFC, Dias JR, Campos MJ, Murray PG, Novais SC.	Sci Rep	10.1038/s41598-025-98978-x	2025
	Nucleoid organization in the radioresistant bacterium Deinococcus radiodurans.	Passot FM, Nguyen HH, Dard-Dascot C, Thermes C, Servant P, Espeli O, Sommer S.	Mol Microbiol	10.1111/mmi.13064	2015
Genetics	Characterization of the genome editing with miniature DNA nucleases TnpB and IscB in Escherichia coli strains.	Tang H, Gao J, Wang H, Sun M, Zhang S, Song C, Li Q.	Commun Biol	10.1038/s42003-025-07521-1	2025
Pathogenicity	The effect of Mn(II) on the autoinducing growth inhibition factor in Deinococcus radiodurans.	Lee HY, Wong TY, Kuo J, Liu JK.	Prep Biochem Biotechnol	10.1080/10826068.2013.854252	2014
Phylogeny	Active site gate of M32 carboxypeptidases illuminated by crystal structure and molecular dynamics simulations.	Sharma B, Jamdar SN, Ghosh B, Yadav P, Kumar A, Kundu S, Goyal VD, Makde RD.	Biochim Biophys Acta Proteins Proteom	10.1016/j.bbapap.2017.07.023	2017
Metabolism	Comparative analysis of two paradigm bacteriophytochromes reveals opposite functionalities in two-component signaling.	Multamaki E, Nanekar R, Morozov D, Lievonen T, Golonka D, Wahlgren WY, Stucki-Buchli B, Rossi J, Hytonen VP, Westenhoff S, Ihalainen JA, Moglich A, Takala H.	Nat Commun	10.1038/s41467-021-24676-7	2021
Metabolism	Remote Sensing of Potential Biosignatures from Rocky, Liquid, or Icy (Exo)Planetary Surfaces.	Poch O, Frey J, Roditi I, Pommerol A, Jost B, Thomas N.	Astrobiology	10.1089/ast.2016.1523	2017
	Optogenetic activation of intracellular signaling based on light-inducible protein-protein homo-interactions.	Huang P, Zhao Z, Duan L.	Neural Regen Res	10.4103/1673-5374.314293	2022
Enzymology	Unraveling the multifaceted resilience of arsenic resistant bacterium Deinococcus indicus.	Gouveia AG, Salgueiro BA, Ranmar DO, Antunes WDT, Kirchweger P, Golani O, Wolf SG, Elbaum M, Matias PM, Romao CV.	Front Microbiol	10.3389/fmicb.2023.1240798	2023
	Investigation of the global translational response to oxidative stress in the model archaeon Haloferax volcanii reveals untranslated small RNAs with ribosome occupancy.	Dallon E, Moran HM, Chidambaran SR, Kian A, Huang BYH, Fried SD, DiRuggiero J.	mSphere	10.1128/msphere.00343-25	2025
Transcriptome	RNA-Seq-Based Comparative Transcriptome Analysis Highlights New Features of the Heat-Stress Response in the Extremophilic Bacterium Deinococcus radiodurans.	Xue D, Liu W, Chen Y, Liu Y, Han J, Geng X, Li J, Jiang S, Zhou Z, Zhang W, Chen M, Lin M, Ongena M, Wang J.	Int J Mol Sci	10.3390/ijms20225603	2019
	Crystal structure of the RNA 2',3'-cyclic phosphodiesterase from Deinococcus radiodurans.	Han W, Cheng J, Zhou C, Hua Y, Zhao Y.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x17004964	2017
Metabolism	Harnessing a radiation inducible promoter of Deinococcus radiodurans for enhanced precipitation of uranium.	Misra CS, Mukhopadhyaya R, Apte SK.	J Biotechnol	10.1016/j.jbiotec.2014.09.013	2014
Metabolism	Connection between absorption properties and conformational changes in Deinococcus radiodurans phytochrome.	Takala H, Lehtivuori H, Hammaren H, Hytonen VP, Ihalainen JA.	Biochemistry	10.1021/bi501180s	2014
	DdrO is an essential protein that regulates the radiation desiccation response and the apoptotic-like cell death in the radioresistant Deinococcus radiodurans bacterium.	Devigne A, Ithurbide S, Bouthier de la Tour C, Passot F, Mathieu M, Sommer S, Servant P.	Mol Microbiol	10.1111/mmi.12991	2015
Pathogenicity	Global transcriptional analysis of Escherichia coli expressing IrrE, a regulator from Deinococcus radiodurans, in response to NaCl shock.	Zhao P, Zhou Z, Zhang W, Lin M, Chen M, Wei G.	Mol Biosyst	10.1039/c5mb00080g	2015
Genetics	Mitigating age-related somatic mutation burden.	Vijg J, Schumacher B, Abakir A, Antonov M, Bradley C, Cagan A, Church G, Gladyshev VN, Gorbunova V, Maslov AY, Reik W, Sharifi S, Suh Y, Walsh K.	Trends Mol Med	10.1016/j.molmed.2023.04.002	2023
	Sterility testing of germ-free mouse colonies.	Dremova O, Mimmler M, Paeslack N, Khuu MP, Gao Z, Bosmann M, Garo LP, Schon N, Mechler A, Beneich Y, Rebling V, Mann A, Pontarollo G, Kiouptsi K, Reinhardt C.	Front Immunol	10.3389/fimmu.2023.1275109	2023
	Expansion of the MutS gene family in plants.	Sloan DB, Broz AK, Kuster SA, Muthye V, Penafiel-Ayala A, Marron JR, Lavrov DV, Brieba LG.	Plant Cell	10.1093/plcell/koae277	2025
Metabolism	Dps from Deinococcus radiodurans: oligomeric forms of Dps1 with distinct cellular functions and Dps2 involved in metal storage.	Santos SP, Mitchell EP, Franquelim HG, Castanho MA, Abreu IA, Romao CV.	FEBS J	10.1111/febs.13420	2015
Biotechnology	Engineering microorganisms for enhanced tolerance to toxic end-products and intermediates.	Wang X, Wu J, Li X, Hu G, Liu L.	FEMS Microbiol Rev	10.1093/femsre/fuaf053	2025
	Crystal Structure of Escherichia coli Agmatinase: Catalytic Mechanism and Residues Relevant for Substrate Specificity.	Maturana P, Orellana MS, Herrera SM, Martinez I, Figueroa M, Martinez-Oyanedel J, Castro-Fernandez V, Uribe E.	Int J Mol Sci	10.3390/ijms22094769	2021
	DdrC, a unique DNA repair factor from D. radiodurans, senses and stabilizes DNA breaks through a novel lesion-recognition mechanism.	Szabla R, Li M, Warner V, Song Y, Junop M.	Nucleic Acids Res	10.1093/nar/gkae635	2024
	Engineering a high-sugar tolerant strain of Saccharomyces cerevisiae for efficient trehalose production using a cell surface display approach.	Tulsook K, Bussadee P, Arnthong J, Mhuantong W, U-Thai P, Trakarnpaiboon S, Champreda V, Suwannarangsee S.	Bioresour Bioprocess	10.1186/s40643-024-00816-x	2024
Enzymology	Structural and functional characterization of two unusual endonuclease III enzymes from Deinococcus radiodurans.	Sarre A, Okvist M, Klar T, Hall DR, Smalas AO, McSweeney S, Timmins J, Moe E.	J Struct Biol	10.1016/j.jsb.2015.05.009	2015
Metabolism	Hsp20, a small heat shock protein of Deinococcus radiodurans, confers tolerance to hydrogen peroxide in Escherichia coli.	Singh H, Appukuttan D, Lim S.	J Microbiol Biotechnol	10.4014/jmb.1403.03006	2014
Enzymology	A novel bacterial class V dye-decolourizing peroxidase from the extremophile Deinococcus radiodurans: cloning, expression optimization, purification, crystallization, initial characterization and X-ray diffraction analysis.	Frade KST, Fernandes ACP, Silveira CM, Frazao C, Moe E.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x18008488	2018
	Hepatoprotective effect of methanol extract of Agave americana leaves on paracetamol induced hepatotoxicity in Wistar albino rats.	Ayenew KD, Wasihun Y.	BMC Complement Med Ther	10.1186/s12906-023-03931-y	2023
	Mismatch uracil DNA glycosylase (Mug) is maintained in the Corynebacterium pseudotuberculosis genome and exhibits affinity for uracil but not other types of damage.	Resende BC, Cassiano CSS, Rios DL, Ladeira TQ, Azevedo VAC, Santos LLD, Valenzuela-Perez L, Cabrera G, Machado CR, Lopes DO.	Genet Mol Biol	10.1590/1678-4685-gmb-2023-0353	2025
	Cysteine Is the Only Universally Affected and Disfavored Proteomic Amino Acid under Oxidative Conditions in Animals.	Schindeldecker M, Moosmann B.	Antioxidants (Basel)	10.3390/antiox13030267	2024
Metabolism	An Improved Method for Identifying Specific DNA-Protein-Binding Sites In Vitro.	Wang L, Lu H, Wang Y, Yang S, Xu H, Cheng K, Zhao Y, Tian B, Hua Y.	Mol Biotechnol	10.1007/s12033-017-9993-y	2017
	sRNA OsiA Stabilizes Catalase mRNA during Oxidative Stress Response of Deincoccus radiodurans R1.	Chen Y, Xue D, Sun W, Han J, Li J, Gao R, Zhou Z, Zhang W, Chen M, Lin M, Wang J, Zuo K.	Microorganisms	10.3390/microorganisms7100422	2019
	Ribosome-binding and anti-microbial studies of the mycinamicins, 16-membered macrolide antibiotics from Micromonospora griseorubida.	Breiner-Goldstein E, Eyal Z, Matzov D, Halfon Y, Cimicata G, Baum M, Rokney A, Ezernitchi AV, Lowell AN, Schmidt JJ, Rozenberg H, Zimmerman E, Bashan A, Valinsky L, Anzai Y, Sherman DH, Yonath A.	Nucleic Acids Res	10.1093/nar/gkab684	2021
	Iron transport pathways in the human malaria parasite Plasmodium falciparum revealed by RNA-sequencing.	Wunderlich J, Kotov V, Votborg-Novel L, Ntalla C, Geffken M, Peine S, Portugal S, Strauss J.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1480076	2024
	Increasing the robustness of Escherichia coli for aromatic chemicals production through transcription factor engineering.	Zhou XL, Zhang MS, Zheng XR, Zhang ZQ, Liu JZ.	Adv Biotechnol (Singap)	10.1007/s44307-024-00023-x	2024
Metabolism	The effect of gamma-ray irradiation on the Mn(II) speciation in Deinococcus radiodurans and the potential role of Mn(II)-orthophosphates.	Bruch EM, de Groot A, Un S, Tabares LC.	Metallomics	10.1039/c5mt00009b	2015
	In vitro reconstitution of transition metal transporters.	Ongey EL, Banerjee A.	J Biol Chem	10.1016/j.jbc.2024.107589	2024
	PprA, a pleiotropic protein for radioresistance, works through DNA gyrase and shows cellular dynamics during postirradiation recovery in Deinococcus radiodurans.	Kota S, Charaka VK, Misra HS.	J Genet	10.1007/s12041-014-0382-z	2014
Enzymology	A cryptic activity in the Nudix hydrolase superfamily.	Bessman MJ.	Protein Sci	10.1002/pro.3666	2019
Metabolism	Effect of DR1558, a Deinococcus radiodurans response regulator, on the production of GABA in the recombinant Escherichia coli under low pH conditions.	Park SH, Sohn YJ, Park SJ, Choi JI.	Microb Cell Fact	10.1186/s12934-020-01322-3	2020
	Observation of early events in the photoactivation of Myxobacterial phytochrome using time-resolved serial femtosecond crystallography.	Malla TN, Aldama L, Leon V, Feliz D, Hu H, Thomas I, Cellini A, Wahlgren WY, Nimmrich A, Botha S, Sierra R, Hunter MS, Poitevin F, Lisova S, Batyuk A, Gate G, Jernigan R, Kupitz CJ, Maj P, Meszaros P, Kurttila M, Monrroy L, Luo F, Owada S, Kang J, Slavov C, Maj M, Gautier C, Kashipathy M, Tolstikova A, Mariani V, Barty A, Moss F, Schwander P, Liu H, Boutet S, Fromme P, Takala H, Ihalainen JA, Weierstall U, Westenhoff S, Stojkovic EA, Schmidt M.	Commun Chem	10.1038/s42004-025-01578-z	2025
	The key residue for SSB-RecO interaction is dispensable for Deinococcus radiodurans DNA repair in vivo.	Cheng K, Xu X, Zhao Y, Wang L, Xu G, Hua Y.	Acta Biochim Biophys Sin (Shanghai)	10.1093/abbs/gmu013	2014
	Steric Effects Govern the Photoactivation of Phytochromes.	Falklof O, Durbeej B.	Chemphyschem	10.1002/cphc.201501080	2016
	Synergistic Interactions among Vacuum, Solar Heating, and UV Irradiation Enhance the Lethality of Interplanetary Space.	Schuerger AC.	Microorganisms	10.3390/microorganisms12101976	2024
	Secretory expression of amylosucrase in Bacillus licheniformis through twin-arginine translocation pathway.	Wang C, Niu D, Mchunu NP, Zhang M, Singh S, Wang Z.	J Ind Microbiol Biotechnol	10.1093/jimb/kuae004	2024
	Gre-family factors modulate DNA damage sensing by Deinococcus radiodurans RNA polymerase.	Agapov A, Esyunina D, Kulbachinskiy A.	RNA Biol	10.1080/15476286.2019.1656027	2019
	Rapid water flow triggers long-distance positive rheotaxis for thermophilic bacteria.	Uemura NA, Chiba N, Morikawa R, Tamakoshi M, Nakane D.	ISME J	10.1093/ismejo/wraf164	2025
Enzymology	Advantages of Using Extremophilic Bacteria for the Biosynthesis of Metallic Nanoparticles and Its Potential for Rare Earth Element Recovery.	Atalah J, Espina G, Blamey L, Munoz-Ibacache SA, Blamey JM.	Front Microbiol	10.3389/fmicb.2022.855077	2022
	Glycan profiling of the gut microbiota by Glycan-seq.	Oinam L, Minoshima F, Tateno H.	ISME Commun	10.1038/s43705-021-00084-2	2022
	Iodine Biogeochemical Cycle and Microbial Bioremediation of Radioactive Iodine-129.	Lee HH.	J Microbiol Biotechnol	10.4014/jmb.2508.08018	2025
	Impact of the Technical Snow Production Process on Bacterial Community Composition, Antibacterial Resistance Genes, and Antibiotic Input-A Dual Effect of the Inevitable.	Stankiewicz K, Bulanda K, Prajsnar J, Lenart-Boron A.	Int J Mol Sci	10.3390/ijms26062771	2025
	Untangling the Complexity of Two-Component Signal Transduction in Bacteria.	Wadach P, Jakimowicz D, Gongerowska-Jac M.	Microorganisms	10.3390/microorganisms13092013	2025
	Structural and DNA end resection study of the bacterial NurA-HerA complex.	Yang J, Sun Y, Wang Y, Hao W, Cheng K.	BMC Biol	10.1186/s12915-023-01542-0	2023
	Uncovering the Hidden Potential of Phytoene Production by the Fungus Blakeslea trispora.	Mantzouridou FT, Sferopoulou E, Thanou P.	Foods	10.3390/foods13182882	2024
Metabolism	New features of the cell wall of the radio-resistant bacterium Deinococcus radiodurans.	Farci D, Bowler MW, Kirkpatrick J, McSweeney S, Tramontano E, Piano D.	Biochim Biophys Acta	10.1016/j.bbamem.2014.02.014	2014
Enzymology	Deinococcus radiodurans can interfere with quorum sensing by producing an AHL-acylase and an AHL-lactonase.	Koch G, Nadal-Jimenez P, Cool RH, Quax WJ.	FEMS Microbiol Lett	10.1111/1574-6968.12479	2014
	Knockout of pprM Decreases Resistance to Desiccation and Oxidation in Deinococcus radiodurans.	Zeng Y, Ma Y, Xiao F, Wang W, He S.	Indian J Microbiol	10.1007/s12088-017-0653-5	2017
	Structural mechanism of signal transduction in a phytochrome histidine kinase.	Wahlgren WY, Claesson E, Tuure I, Trillo-Muyo S, Bodizs S, Ihalainen JA, Takala H, Westenhoff S.	Nat Commun	10.1038/s41467-022-34893-3	2022
	PacBio sequencing of human fecal samples uncovers the DNA methylation landscape of 22 673 gut phages.	Ding Y, Zhao L, Wang G, Shi Y, Guo G, Liu C, Chen Z, Coker OO, She J, Yu J.	Nucleic Acids Res	10.1093/nar/gkad977	2023
Enzymology	Structural and functional studies of MutS2 from Deinococcus radiodurans.	Zhang H, Xu Q, Lu M, Xu X, Wang Y, Wang L, Zhao Y, Hua Y.	DNA Repair (Amst)	10.1016/j.dnarep.2014.04.012	2014
	Composition and in situ structure of the Methanospirillum hungatei cell envelope and surface layer.	Wang H, Zhang J, Liao S, Henstra AM, Leon D, Erde J, Loo JA, Ogorzalek Loo RR, Zhou ZH, Gunsalus RP.	Sci Adv	10.1126/sciadv.adr8596	2024
Metabolism	A PerR-like protein involved in response to oxidative stress in the extreme bacterium Deinococcus radiodurans.	Liu C, Wang L, Li T, Lin L, Dai S, Tian B, Hua Y.	Biochem Biophys Res Commun	10.1016/j.bbrc.2014.06.015	2014
Enzymology	Thermostable lipases from extremely radioresistant bacterium Deinococcus radiodurans: cloning, expression, and biochemical characterization.	Shao H, Xu L, Yan Y.	J Basic Microbiol	10.1002/jobm.201300434	2014
	N ⁴-Cytosine DNA Methylation Is Involved in the Maintenance of Genomic Stability in Deinococcus radiodurans.	Li S, Cai J, Lu H, Mao S, Dai S, Hu J, Wang L, Hua X, Xu H, Tian B, Zhao Y, Hua Y.	Front Microbiol	10.3389/fmicb.2019.01905	2019
	Biosynthesis of Au, Ag and Au-Ag bimetallic nanoparticles using protein extracts of Deinococcus radiodurans and evaluation of their cytotoxicity.	Li J, Tian B, Li T, Dai S, Weng Y, Lu J, Xu X, Jin Y, Pang R, Hua Y.	Int J Nanomedicine	10.2147/ijn.s149079	2018
	One Advantage of Being Polyploid: Prokaryotes of Various Phylogenetic Groups Can Grow in the Absence of an Environmental Phosphate Source at the Expense of Their High Genome Copy Numbers.	Bruck P, Wasser D, Soppa J.	Microorganisms	10.3390/microorganisms11092267	2023
	Potassium Radioisotope 40 as Component of Mitochondria Physiology: Therapy Proposal for Mitochondrial Disfunction Diseases.	Tomasi M.	Front Public Health	10.3389/fpubh.2020.578392	2020
	Structural Determinants of Improved Fluorescence in a Family of Bacteriophytochrome-Based Infrared Fluorescent Proteins: Insights from Continuum Electrostatic Calculations and Molecular Dynamics Simulations.	Feliks M, Lafaye C, Shu X, Royant A, Field M.	Biochemistry	10.1021/acs.biochem.6b00295	2016
Pathogenicity	Extremely high UV-C radiation resistant microorganisms from desert environments with different manganese concentrations.	Paulino-Lima IG, Fujishima K, Navarrete JU, Galante D, Rodrigues F, Azua-Bustos A, Rothschild LJ.	J Photochem Photobiol B	10.1016/j.jphotobiol.2016.08.017	2016
	Cryo-EM structure of the transposon-associated TnpB enzyme.	Nakagawa R, Hirano H, Omura SN, Nety S, Kannan S, Altae-Tran H, Yao X, Sakaguchi Y, Ohira T, Wu WY, Nakayama H, Shuto Y, Tanaka T, Sano FK, Kusakizako T, Kise Y, Itoh Y, Dohmae N, van der Oost J, Suzuki T, Zhang F, Nureki O.	Nature	10.1038/s41586-023-05933-9	2023
	Silver Nanomaterial-Immobilized Desalination Systems for Efficient Removal of Radioactive Iodine Species in Water.	Shim HE, Yang JE, Jeong SW, Lee CH, Song L, Mushtaq S, Choi DS, Choi YJ, Jeon J.	Nanomaterials (Basel)	10.3390/nano8090660	2018
	An integrated proteo-transcriptomics approach reveals novel drug targets against multidrug resistant Escherichia coli.	Aswal M, Singh N, Singhal N, Kumar M.	Front Microbiol	10.3389/fmicb.2025.1531739	2025
	Potent Inhibition of E. coli DXP Synthase by a gem-Diaryl Bisubstrate Analog.	Coco LB, Toci EM, Chen PY, Drennan CL, Freel Meyers CL.	ACS Infect Dis	10.1021/acsinfecdis.3c00734	2024
	Molecular dynamics and machine learning stratify motion-dependent activity profiles of S-layer destabilizing nanobodies.	Cecil AJ, Sogues A, Gurumurthi M, Lane KS, Remaut H, Pak AJ.	PNAS Nexus	10.1093/pnasnexus/pgae538	2024
	MicroED as a Powerful Tool for Structure Determination of Macrocyclic Drug Compounds Directly from Their Powder Formulations.	Danelius E, Bu G, Wieske LHE, Gonen T.	ACS Chem Biol	10.1021/acschembio.3c00611	2023
Metabolism	FtsZDr, a tubulin homologue in radioresistant bacterium Deinococcus radiodurans is characterized as a GTPase exhibiting polymerization/depolymerization dynamics in vitro and FtsZ ring formation in vivo.	Modi KM, Tewari R, Misra HS.	Int J Biochem Cell Biol	10.1016/j.biocel.2014.01.015	2014
Metabolism	Identification and characterization of the geranylgeranyl diphosphate synthase in Deinococcus radiodurans.	Liu C, Sun Z, Shen S, Lin L, Li T, Tian B, Hua Y.	Lett Appl Microbiol	10.1111/lam.12181	2014
	Structural insights into RNase J that plays an essential role in Mycobacterium tuberculosis RNA metabolism.	Bao L, Hu J, Zhan B, Chi M, Li Z, Wang S, Shan C, Zhao Z, Guo Y, Ding X, Ji C, Tao S, Ni T, Zhang X, Zhao G, Li J.	Nat Commun	10.1038/s41467-023-38045-z	2023
Enzymology	Structural and biochemical evidence supporting poly ADP-ribosylation in the bacterium Deinococcus radiodurans.	Cho CC, Chien CY, Chiu YC, Lin MH, Hsu CH.	Nat Commun	10.1038/s41467-019-09153-6	2019
Biotechnology	Unraveling the Potential of gamma-Aminobutyric Acid: Insights into Its Biosynthesis and Biotechnological Applications.	Zhu L, Wang Z, Gao L, Chen X.	Nutrients	10.3390/nu16162760	2024
Enzymology	Structure of the monofunctional heme catalase DR1998 from Deinococcus radiodurans.	Borges PT, Frazao C, Miranda CS, Carrondo MA, Romao CV.	FEBS J	10.1111/febs.12895	2014
	RNA-seq analysis in simulated microgravity unveils down-regulation of the beta-rhizobial siderophore phymabactin.	Golaz D, Papenfuhs CK, Belles-Sancho P, Eberl L, Egli M, Pessi G.	NPJ Microgravity	10.1038/s41526-024-00391-7	2024
Metabolism	Bioprecipitation of uranium from alkaline waste solutions using recombinant Deinococcus radiodurans.	Kulkarni S, Ballal A, Apte SK.	J Hazard Mater	10.1016/j.jhazmat.2013.09.057	2013
	Small Prokaryotic DNA-Binding Proteins Protect Genome Integrity throughout the Life Cycle.	Molan K, Zgur Bertok D.	Int J Mol Sci	10.3390/ijms23074008	2022
	Small-Molecule Mn Antioxidants in Caenorhabditis elegans and Deinococcus radiodurans Supplant MnSOD Enzymes during Aging and Irradiation.	Gaidamakova EK, Sharma A, Matrosova VY, Grichenko O, Volpe RP, Tkavc R, Conze IH, Klimenkova P, Balygina I, Horne WH, Gostincar C, Chen X, Makarova KS, Shuryak I, Srinivasan C, Jackson-Thompson B, Hoffman BM, Daly MJ.	mBio	10.1128/mbio.03394-21	2022
	The IS200/IS605 Family and "Peel and Paste" Single-strand Transposition Mechanism.	He S, Corneloup A, Guynet C, Lavatine L, Caumont-Sarcos A, Siguier P, Marty B, Dyda F, Chandler M, Ton Hoang B.	Microbiol Spectr	10.1128/microbiolspec.mdna3-0039-2014	2015
Genetics	Salty secrets of Halobacterium salinarum AD88: a new archaeal ecotype isolated from Cuatro Cienegas Basin.	Medina-Chavez NO, Rodriguez-Cruz UE, Souza V, De la Torre-Zavala S, Travisano M.	BMC Genomics	10.1186/s12864-025-11550-9	2025
	Comparative assessment of UV-C radiation and non-thermal plasma for inactivation of foodborne fungal spores suspension in vitro.	Kulisova M, Rabochova M, Lorincik J, Matatkova O, Branyik T, Hrudka J, Scholtz V, Jarosova Kolouchova I.	RSC Adv	10.1039/d4ra01689k	2024
Transcriptome	Transcriptome analysis of salt-stressed Deinococcus radiodurans and characterization of salt-sensitive mutants.	Im S, Joe M, Kim D, Park DH, Lim S.	Res Microbiol	10.1016/j.resmic.2013.07.005	2013
	Enhanced Radiation Resistance of Methanosarcina soligelidi SMA-21, a New Methanogenic Archaeon Isolated from a Siberian Permafrost-Affected Soil in Direct Comparison to Methanosarcina barkeri.	Morozova D, Moeller R, Rettberg P, Wagner D.	Astrobiology	10.1089/ast.2015.1319	2015
	Hypothetical proteins present during recovery phase of radiation resistant bacterium Deinococcus radiodurans are under purifying selection.	Das AD, Misra HS.	J Mol Evol	10.1007/s00239-013-9577-9	2013
	Dry mass photometry of single bacteria using quantitative wavefront microscopy.	Benefice M, Gorlas A, Marthy B, Da Cunha V, Forterre P, Sentenac A, Chaumet PC, Baffou G.	Biophys J	10.1016/j.bpj.2023.06.020	2023
	Effects of Low-Temperature Plasma-Sterilization on Mars Analog Soil Samples Mixed with Deinococcus radiodurans.	Schirmack J, Fiebrandt M, Stapelmann K, Schulze-Makuch D.	Life (Basel)	10.3390/life6020022	2016
	Genetically engineered filamentous phage for bacterial detection using magnetic resonance imaging.	Borg RE, Ozbakir HF, Xu B, Li E, Fang X, Peng H, Chen IA, Mukherjee A.	Sens Diagn	10.1039/d3sd00026e	2023
Enzymology	Validation of a homology model of Mycobacterium tuberculosis DXS: rationalization of observed activities of thiamine derivatives as potent inhibitors of two orthologues of DXS.	Masini T, Lacy B, Monjas L, Hawksley D, de Voogd AR, Illarionov B, Iqbal A, Leeper FJ, Fischer M, Kontoyianni M, Hirsch AK.	Org Biomol Chem	10.1039/c5ob01666e	2015
Metabolism	Characterization of a Deinococcus radiodurans MazF: A UACA-specific RNA endoribonuclease.	Miyamoto T, Ota Y, Yokota A, Suyama T, Tsuneda S, Noda N.	Microbiologyopen	10.1002/mbo3.501	2017
	ParA encoded on chromosome II of Deinococcus radiodurans binds to nucleoid and inhibits cell division in Escherichia coli.	Charaka VK, Mehta KP, Misra HS.	J Biosci	10.1007/s12038-013-9352-5	2013
Enzymology	NMR structure of the N-terminal-most HRDC1 domain of RecQ helicase from Deinococcus radiodurans.	Liu S, Zhang W, Gao Z, Ming Q, Hou H, Lan W, Wu H, Cao C, Dong Y.	FEBS Lett	10.1016/j.febslet.2013.06.048	2013
Metabolism	Structure-function study of deinococcal serine/threonine protein kinase implicates its kinase activity and DNA repair protein phosphorylation roles in radioresistance of Deinococcus radiodurans.	Rajpurohit YS, Misra HS.	Int J Biochem Cell Biol	10.1016/j.biocel.2013.08.011	2013
Genetics	Engineering prokaryotic regulator IrrE to enhance stress tolerance in budding yeast.	Wang L, Wang X, He ZQ, Zhou SJ, Xu L, Tan XY, Xu T, Li BZ, Yuan YJ.	Biotechnol Biofuels	10.1186/s13068-020-01833-6	2020
	hpCasMINI: An engineered hypercompact CRISPR-Cas12f system with boosted gene editing activity.	Ma S, Liao K, Chen K, Cheng T, Yang X, Chen P, Li S, Li M, Zhang X, Zhang Y, Huang T, Wang X, Wang L, Lin Y, Rong Z.	Nat Commun	10.1038/s41467-025-60124-6	2025
Pathogenicity	Development of a novel uric-acid-responsive regulatory system in Escherichia coli.	Liang C, Xiong D, Zhang Y, Mu S, Tang SY.	Appl Microbiol Biotechnol	10.1007/s00253-014-6290-6	2015
Metabolism	ISDra2 transposition in Deinococcus radiodurans is downregulated by TnpB.	Pasternak C, Dulermo R, Ton-Hoang B, Debuchy R, Siguier P, Coste G, Chandler M, Sommer S.	Mol Microbiol	10.1111/mmi.12194	2013
	The Effect of Cysteine on the Removal of Cadmium in Paddy Soil by Combination with Bioremediation and the Response of the Soil Microbial Community.	Sarkodie EK, Li K, Guo Z, Yang J, Deng Y, Shi J, Peng Y, Jiang Y, Jiang H, Liu H, Liang Y, Yin H, Liu X, Jiang L.	Toxics	10.3390/toxics13010022	2024
Metabolism	Fluorescence properties of the chromophore-binding domain of bacteriophytochrome from Deinococcus radiodurans.	Lehtivuori H, Rissanen I, Takala H, Bamford J, Tkachenko NV, Ihalainen JA.	J Phys Chem B	10.1021/jp312061b	2013
	Deficiency of a peroxisomal NADP-isocitrate dehydrogenase leads to dwarf plant and defect seed in upland cotton.	Cao Y, Wang W, Chen J, Zhu S, Zhao T.	Front Plant Sci	10.3389/fpls.2022.1000883	2022
	Assessing the prospect of XAFS experiments of metalloproteins under in vivo conditions at Indus-2 synchrotron facility, India.	Lahiri D, Agrawal R, Chandravanshi K, Rajput P, Agrawal A, Dwivedi A, Makde RD, Jha SN, Garg N.	J Synchrotron Radiat	10.1107/s1600577522011791	2023
	Raman Spectroscopic Techniques for Planetary Exploration: Detecting Microorganisms through Minerals.	Verkaaik MF, Hooijschuur JH, Davies GR, Ariese F.	Astrobiology	10.1089/ast.2015.1329	2015
	Ozone Disinfection for Elimination of Bacteria and Degradation of SARS-CoV2 RNA for Medical Environments.	Westover C, Rahmatulloev S, Danko D, Afshin EE, O'Hara NB, Ounit R, Bezdan D, Mason CE.	Genes (Basel)	10.3390/genes14010085	2022
Metabolism	Prokaryotic homeostasis - a solution to thrive and survive.	Baranska S, Boss L, Gasior F, Glinkowska M, Kedzierska B, Maciag-Dorszynska M, Nowicki D, Potrykus K, Szalewska-Palasz A.	Front Mol Biosci	10.3389/fmolb.2025.1704789	2025
	DetR DB: A Database of Ionizing Radiation Resistance Determinants.	Ryabova A, Kozlova O, Kadirov A, Ananeva A, Gusev O, Shagimardanova E.	Genes (Basel)	10.3390/genes11121477	2020
Metabolism	Molecular insights into replication initiation in a multipartite genome harboring bacterium Deinococcus radiodurans.	Maurya GK, Chaudhary R, Pandey N, Misra HS.	J Biol Chem	10.1016/j.jbc.2021.100451	2021
	Characteristics of a Temperature-Sensitive Mutant Strain of Salmonella Enteritidis and Its Potential as a Live Vaccine Candidate.	Shin H, La TM, Lee HJ, Kim T, Song SU, Park GH, Choi IS, Park SY, Lee JB, Lee SW.	Vet Sci	10.3390/vetsci10050313	2023
	Molecular interplay between ComEC domains allows for selective degradation of the non-translocating strand during natural transformation.	Stedman MJM, Deselaers S, Braus SAG, Wang D, Balaguer MG, Gossert AD, Hospenthal MK.	Nucleic Acids Res	10.1093/nar/gkaf932	2025
	Coexistence of SOS-Dependent and SOS-Independent Regulation of DNA Repair Genes in Radiation-Resistant Deinococcus Bacteria.	Blanchard L, de Groot A.	Cells	10.3390/cells10040924	2021
	In Silico, Molecular Docking and In Vitro Antimicrobial Activity of the Major Rapeseed Seed Storage Proteins.	Rahman M, Browne JJ, Van Crugten J, Hasan MF, Liu L, Barkla BJ.	Front Pharmacol	10.3389/fphar.2020.01340	2020
Metabolism	A further biochemical characterization of DrPLL the thermophilic lactonase from Deinococcus radiodurans.	Mandrich L, Di Gennaro S, Palma A, Manco G.	Protein Pept Lett	10.2174/092986613804096810	2013
	Structural and functional insights into the activation of the dual incision activity of UvrC, a key player in bacterial NER.	Seck A, De Bonis S, Stelter M, Okvist M, Senarisoy M, Hayek MR, Le Roy A, Martin L, Saint-Pierre C, Silveira CM, Gasparutto D, Todorovic S, Ravanat JL, Timmins J.	Nucleic Acids Res	10.1093/nar/gkad108	2023
	Proteomic and Metabolomic Profiling of Deinococcus radiodurans Recovering After Exposure to Simulated Low Earth Orbit Vacuum Conditions.	Ott E, Kawaguchi Y, Ozgen N, Yamagishi A, Rabbow E, Rettberg P, Weckwerth W, Milojevic T.	Front Microbiol	10.3389/fmicb.2019.00909	2019
	Comparative survival analysis of 12 histidine kinase mutants of Deinococcus radiodurans after exposure to DNA-damaging agents.	Im S, Song D, Joe M, Kim D, Park DH, Lim S.	Bioprocess Biosyst Eng	10.1007/s00449-013-0904-8	2013
Biotechnology	Transcriptional response of the xerotolerant Arthrobacter sp. Helios strain to PEG-induced drought stress.	Hernandez-Fernandez G, Galan B, Carmona M, Castro L, Garcia JL.	Front Microbiol	10.3389/fmicb.2022.1009068	2022
Metabolism	Properties of recombinant trehalose synthase from Deinococcus radiodurans expressed in Escherichia coli.	Filipkowski P, Pietrow O, Panek A, Synowiecki J.	Acta Biochim Pol	10.18388/abp.2012_2133	2012
	Analysis of the antimicrobial susceptibility of the ionizing radiation-resistant bacterium Deinococcus radiodurans: implications for bioremediation of radioactive waste	Sghaier H, Bouchami O, Desler C, Lazim H, Saidi M, Rasmussen LJ, Ben Hassen A.	Ann Microbiol	10.1007/s13213-011-0281-y	2012
	High-throughput sequencing reveals the structure and metabolic resilience of desert microbiome confronting climate change.	Mousa WK, Abu-Izneid T, Salah-Tantawy A.	Front Plant Sci	10.3389/fpls.2024.1294173	2024
	A sensitive red/far-red photoswitch for controllable gene therapy in mouse models of metabolic diseases.	Qiao L, Niu L, Wang M, Wang Z, Kong D, Yu G, Ye H.	Nat Commun	10.1038/s41467-024-54781-2	2024
	Structural studies of ribosome from an anaerobic Bacteroidetes human pathogen Porphyromonas gingivalis.	Hiregange DG, Samiya S, Mizgalska D, Ben-Zeev E, Waghalter M, Rivalta A, Rajan KS, Halfon Y, Breiner-Goldstein E, Kaczmarczyk I, Sroka A, Taoka M, Nobe Y, Isobe T, Paukner S, Zimmerman E, Bashan A, Potempa J, Yonath A.	Nucleic Acids Res	10.1093/nar/gkaf458	2025
	Characterization and functional evidence for Orf2 of Streptomyces sp. 139 as a novel dipeptidase E.	Liu Z, Li K, Li J, Zhuang Z, Guo L, Bai L.	Appl Microbiol Biotechnol	10.1007/s00253-024-13161-y	2024
Metabolism	Deinococcus radiodurans YgjD and YeaZ are involved in the repair of DNA cross-links.	Onodera T, Satoh K, Ohta T, Narumi I.	Extremophiles	10.1007/s00792-012-0506-4	2013
	Enhancing the Inhomogeneous Photodynamics of Canonical Bacteriophytochrome.	Rydzewski J, Walczewska-Szewc K, Czach S, Nowak W, Kuczera K.	J Phys Chem B	10.1021/acs.jpcb.2c00131	2022
Phylogeny	Offline Next Generation Metagenomics Sequence Analysis Using MinION Detection Software (MINDS).	Deshpande SV, Reed TM, Sullivan RF, Kerkhof LJ, Beigel KM, Wade MM.	Genes (Basel)	10.3390/genes10080578	2019
Transcriptome	Multi-omics analyses of the mechanism for the formation of soy sauce-like and soybean flavor in Bacillus subtilis BJ3-2.	Wu Y, Tao Y, Jin J, Tong S, Li S, Zhang L.	BMC Microbiol	10.1186/s12866-022-02555-5	2022
	Specificity of the DNA Mismatch Repair System (MMR) and Mutagenesis Bias in Bacteria.	Long H, Miller SF, Williams E, Lynch M.	Mol Biol Evol	10.1093/molbev/msy134	2018
Genetics	Amplicon-Based Microbiome Profiling: From Second- to Third-Generation Sequencing for Higher Taxonomic Resolution.	Notario E, Visci G, Fosso B, Gissi C, Tanaskovic N, Rescigno M, Marzano M, Pesole G.	Genes (Basel)	10.3390/genes14081567	2023
Metabolism	An infrared reporter to detect spatiotemporal dynamics of protein-protein interactions.	Tchekanda E, Sivanesan D, Michnick SW.	Nat Methods	10.1038/nmeth.2934	2014
Metabolism	Roles of DNA repair and membrane integrity in heat resistance of Deinococcus radiodurans.	Bauermeister A, Hahn C, Rettberg P, Reitz G, Moeller R.	Arch Microbiol	10.1007/s00203-012-0834-x	2012
	Combinatorial Approaches for Efficient Design of Photoswitchable Protein-Protein Interactions as In Vivo Actuators.	Zhang X, Pan Y, Kang S, Gu L.	Front Bioeng Biotechnol	10.3389/fbioe.2022.844405	2022
Pathogenicity	The Microbial Anti-Inflammatory Molecule (MAM) is a key protein processed and exported to Faecalibacterium duncaniae envelope.	Vilela Rodrigues T, Marthey S, Auger S, Lima de Jesus L, Henry C, Pechoux C, Arteni A, Martin V, Langella P, de Castro Soares S, Andre G, Azevedo VAC, Chatel JM.	Gut Microbes	10.1080/19490976.2025.2519695	2025
	Spontaneous mutations and mutational responses to penicillin treatment in the bacterial pathogen Streptococcus pneumoniae D39.	Jiang W, Lin T, Pan J, Rivera CE, Tincher C, Wang Y, Zhang Y, Gao X, Wang Y, Tsui HT, Winkler ME, Lynch M, Long H.	Mar Life Sci Technol	10.1007/s42995-024-00220-6	2024
	Comparison of the structure and activity of thioredoxin 2 and thioredoxin 1 from Acinetobacter baumannii.	Chang YJ, Sung JH, Lee CS, Lee JH, Park HH.	IUCrJ	10.1107/s2052252523000404	2023
	The PprA protein is required for accurate cell division of gamma-irradiated Deinococcus radiodurans bacteria.	Devigne A, Mersaoui S, Bouthier-de-la-Tour C, Sommer S, Servant P.	DNA Repair (Amst)	10.1016/j.dnarep.2013.01.004	2013
	Modulation of Structural Heterogeneity Controls Phytochrome Photoswitching.	Gustavsson E, Isaksson L, Persson C, Mayzel M, Brath U, Vrhovac L, Ihalainen JA, Karlsson BG, Orekhov V, Westenhoff S.	Biophys J	10.1016/j.bpj.2019.11.025	2020
Metabolism	Pyrroloquinoline quinone and a quinoprotein kinase support gamma-radiation resistance in Deinococcus radiodurans and regulate gene expression.	Rajpurohit YS, Desai SS, Misra HS.	J Basic Microbiol	10.1002/jobm.201100650	2013
	Structures in multiple conformations reveal distinct transition metal and proton pathways in an Nramp transporter.	Bozzi AT, Zimanyi CM, Nicoludis JM, Lee BK, Zhang CH, Gaudet R.	Elife	10.7554/elife.41124	2019
Pathogenicity	Unraveling the Role of the Zinc-Dependent Metalloproteinase/HTH-Xre Toxin/Antitoxin (TA) System of Brucella abortus in the Oxidative Stress Response: Insights into the Stress Response and Virulence.	Gomez LA, Molina RE, Soto RI, Flores MR, Coloma-Rivero RF, Montero DA, Onate AA.	Toxins (Basel)	10.3390/toxins15090536	2023
	The primary structural photoresponse of phytochrome proteins captured by a femtosecond X-ray laser.	Claesson E, Wahlgren WY, Takala H, Pandey S, Castillon L, Kuznetsova V, Henry L, Panman M, Carrillo M, Kubel J, Nanekar R, Isaksson L, Nimmrich A, Cellini A, Morozov D, Maj M, Kurttila M, Bosman R, Nango E, Tanaka R, Tanaka T, Fangjia L, Iwata S, Owada S, Moffat K, Groenhof G, Stojkovic EA, Ihalainen JA, Schmidt M, Westenhoff S.	Elife	10.7554/elife.53514	2020
Metabolism	Functional comparison of Deinococcus radiodurans Dps proteins suggests distinct in vivo roles.	Reon BJ, Nguyen KH, Bhattacharyya G, Grove A.	Biochem J	10.1042/bj20120902	2012
	Biosynthesis and Characterization of Gold Nanoparticles Produced Using Rhodococcus Actinobacteria at Elevated Chloroauric Acid Concentrations.	Kuyukina MS, Makarova MV, Ivshina IB, Kazymov KP, Osovetsky BM.	Int J Mol Sci	10.3390/ijms232112939	2022
	Fidelity, specialization, and evolution of Paramecium PolX DNA polymerases involved in programmed double-strand break DNA repair.	Nourisson A, Missoury S, Lucas-Staat S, Haouz A, Delarue M.	Nucleic Acids Res	10.1093/nar/gkaf786	2025
Metabolism	Biosynthesis of gold nanoparticles by the extreme bacterium Deinococcus radiodurans and an evaluation of their antibacterial properties.	Li J, Li Q, Ma X, Tian B, Li T, Yu J, Dai S, Weng Y, Hua Y.	Int J Nanomedicine	10.2147/ijn.s119618	2016
	The tellurite resistance gene cluster of pathogenic bacteria and its effect on oxidative stress response.	Vavrova S, Grones J, Soltys K, Celec P, Turna J.	Folia Microbiol (Praha)	10.1007/s12223-024-01133-8	2024
Metabolism	DR1440 is a potential iron efflux protein involved in maintenance of iron homeostasis and resistance of Deinococcus radiodurans to oxidative stress.	Dai S, Jin Y, Li T, Weng Y, Xu X, Zhang G, Li J, Pang R, Tian B, Hua Y.	PLoS One	10.1371/journal.pone.0202287	2018
Metabolism	Three nth homologs are all required for efficient repair of spontaneous DNA damage in Deinococcus radiodurans.	Hua X, Xu X, Li M, Wang C, Tian B, Hua Y.	Extremophiles	10.1007/s00792-012-0447-y	2012
	Carotenoid productivity in human intestinal bacteria Eubacterium limosum and Leuconostoc mesenteroides with functional analysis of their carotenoid biosynthesis genes.	Matsumoto W, Takemura M, Nanaura H, Ami Y, Maoka T, Shindo K, Kurihara S, Misawa N.	Eng Microbiol	10.1016/j.engmic.2024.100147	2024
	Transcriptional repression by a secondary DNA binding surface of DNA topoisomerase I safeguards against hypertranscription.	Lau MS, Hu Z, Zhao X, Tan YS, Liu J, Huang H, Yeo CJ, Leong HF, Grinchuk OV, Chan JK, Yan J, Tee WW.	Nat Commun	10.1038/s41467-023-42078-9	2023
	Metal binding at the Deinococcus radiodurans Dps-1 N-terminal metal site controls dodecameric assembly and DNA binding.	Nguyen KH, Grove A.	Biochemistry	10.1021/bi300703x	2012
	Functions of Bacterial tRNA Modifications: From Ubiquity to Diversity.	de Crecy-Lagard V, Jaroch M.	Trends Microbiol	10.1016/j.tim.2020.06.010	2021
	Food profiling goes green: Sustainable analysis strategies for food authentication.	Creydt M, Fischer M.	Electrophoresis	10.1002/elps.202400098	2025
	Sensitivity of Deinococcus grandis rodZ deletion mutant to calcium ions results in enhanced spheroplast size.	Morita Y, Okumura M, Narumi I, Nishida H.	AIMS Microbiol	10.3934/microbiol.2019.2.176	2019
	Conservation and diversity of radiation and oxidative stress resistance mechanisms in Deinococcus species.	Lim S, Jung JH, Blanchard L, de Groot A.	FEMS Microbiol Rev	10.1093/femsre/fuy037	2019
Genetics	Unraveling radiation resistance strategies in two bacterial strains from the high background radiation area of Chavara-Neendakara: A comprehensive whole genome analysis.	Pal S, Yuvaraj R, Krishnan H, Venkatraman B, Abraham J, Gopinathan A.	PLoS One	10.1371/journal.pone.0304810	2024
Pathogenicity	Contact-free cold atmospheric plasma treatment of Deinococcus radiodurans.	Maisch T, Shimizu T, Mitra A, Heinlin J, Karrer S, Li YF, Morfill G, Zimmermann JL.	J Ind Microbiol Biotechnol	10.1007/s10295-012-1137-6	2012
	Polyploidy in archaea and bacteria: about desiccation resistance, giant cell size, long-term survival, enforcement by a eukaryotic host and additional aspects.	Soppa J.	J Mol Microbiol Biotechnol	10.1159/000368855	2014
	Tiamulin-Resistant Mutants of the Thermophilic Bacterium Thermus thermophilus.	Killeavy EE, Jogl G, Gregory ST.	Antibiotics (Basel)	10.3390/antibiotics9060313	2020
	Complete Genome Sequence of Arthrobacter sp. Strain MN05-02, a UV-Resistant Bacterium from a Manganese Deposit in the Sonoran Desert.	Ii KM, Kono N, Paulino-Lima IG, Tomita M, Rothschild LJ, Arakawa K.	J Genomics	10.7150/jgen.32194	2019
	A Survey of Spontaneous Antibiotic-Resistant Mutants of the Halophilic, Thermophilic Bacterium Rhodothermus marinus.	Silvia S, Donahue SA, Killeavy EE, Jogl G, Gregory ST.	Antibiotics (Basel)	10.3390/antibiotics10111384	2021
Genetics	Adaptation to space conditions of novel bacterial species isolated from the International Space Station revealed by functional gene annotations and comparative genome analysis.	Szydlowski LM, Bulbul AA, Simpson AC, Kaya DE, Singh NK, Sezerman UO, Labaj PP, Kosciolek T, Venkateswaran K.	Microbiome	10.1186/s40168-024-01916-8	2024
Enzymology	Structure-function studies of an unusual 3-methyladenine DNA glycosylase II (AlkA) from Deinococcus radiodurans.	Moe E, Hall DR, Leiros I, Monsen VT, Timmins J, McSweeney S.	Acta Crystallogr D Biol Crystallogr	10.1107/s090744491200947x	2012
	The Dynamic Nature of Genomes across the Tree of Life	Oliverio AM, Katz LA.	Genome biology and evolution.		2014
	Optogenetic-Controlled iPSC-Based Vaccines for Prophylactic and Therapeutic Tumor Suppression in Mice.	Qiao L, Niu L, Wang Z, Dai D, Tang S, Ma X, Deng Z, Yu G, Zhou Y, Yan T, Liu X, Kong D, Hu L, Li X, Zhao J, Cai F, Wang M, Ye H.	Adv Sci (Weinh)	10.1002/advs.202416115	2025
Metabolism	DR2417, a hypothetical protein characterized as a novel beta-CASP family nuclease in radiation resistant bacterium, Deinococcus radiodurans.	Das AD, Misra HS.	Biochim Biophys Acta	10.1016/j.bbagen.2012.03.014	2012
	Combined optical fluorescence microscopy and X-ray tomography reveals substructures in cell nuclei in 3D.	Wittmeier A, Bernhardt M, Robisch AL, Cassini C, Osterhoff M, Salditt T, Koster S.	Biomed Opt Express	10.1364/boe.462493	2022
Genetics	An integrated strain-level analytic pipeline utilizing longitudinal metagenomic data.	Zhou B, Wang C, Putzel G, Hu J, Liu M, Wu F, Chen Y, Pironti A, Li H.	Microbiol Spectr	10.1128/spectrum.01431-24	2024
Enzymology	Purification, crystallization and preliminary crystallographic investigation of FrnE, a disulfide oxidoreductase from Deinococcus radiodurans.	Panicker L, Misra HS, Bihani SC.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x14020330	2014
	Influence of the C-Terminal Tail of RecA Proteins from Alkaline pH-Resistant Bacterium Deinococcus Ficus.	Fan HF, Su S, Kuo YA, Chen CJ.	ACS Omega	10.1021/acsomega.0c02865	2020
	Nucleoid structure and dynamics influence natural chromosomal transformation in Bacillus subtilis: the role of EbfC.	Torres R, Lopez-Sanz M, Ushijima Y, Morikawa K, Alonso JC.	Nucleic Acids Res	10.1093/nar/gkaf1051	2025
Metabolism	Genetic and biochemical characteristics of the histone-like protein DR0199 in Deinococcus radiodurans.	Wang H, Wang F, Hua X, Ma T, Chen J, Xu X, Wang L, Tian B, Hua Y.	Microbiology (Reading)	10.1099/mic.0.053702-0	2012
Genetics	Multi-omics characterization of a lytic phage targeting Listeria monocytogenes.	Cucic S, Putzeys L, Boon M, Lepp D, Lavigne R, Khursigara CM, Anany H.	mSystems	10.1128/msystems.00587-25	2025
	Anti-methicillin-resistant Staphylococcus aureus activity and safety evaluation of 14-O-[(5-ethoxycarbonyl-4,6-dimethylpyrimidine-2-yl) thioacetyl] mutilin (EDT).	Zhou Y, Yi Y, Yang J, Zhang H, Liu Q, Wang S, Pu W, Shang R.	Sci Rep	10.1038/s41598-023-42621-0	2023
Metabolism	On the stoichiometry of Deinococcus radiodurans Dps-1 binding to duplex DNA.	Nguyen KH, Smith LT, Xiao L, Bhattacharyya G, Grove A.	Proteins	10.1002/prot.23228	2012
	Purification, Identification, and Properties of a Novel Carotenoid Produced by Arthrobacter sp. QL17 Isolated from Mount Qomolangma.	Yu X, Jiang K, Zhang W, Dong S, Wu Y, Zhang G, Wu S, Chen T, Liu G.	Antioxidants (Basel)	10.3390/antiox11081493	2022
Pathogenicity	Induction of apoptosis by deinoxanthin in human cancer cells.	Choi YJ, Hur JM, Lim S, Jo M, Kim DH, Choi JI.	Anticancer Res		2014
Metabolism	Function and biochemical characterization of RecJ in Deinococcus radiodurans.	Jiao J, Wang L, Xia W, Li M, Sun H, Xu G, Tian B, Hua Y.	DNA Repair (Amst)	10.1016/j.dnarep.2011.11.008	2012
Metabolism	The structural basis of the response regulator DrRRA from Deinococcus radiodurans.	Liu Y, Gao ZQ, She Z, Qu K, Wang WJ, Shtykova EV, Xu JH, Ji CN, Dong YH.	Biochem Biophys Res Commun	10.1016/j.bbrc.2011.12.110	2012
	Functional assessment of hydrophilic domains of late embryogenesis abundant proteins from distant organisms.	Liu Y, Zhang H, Han J, Jiang S, Geng X, Xue D, Chen Y, Zhang C, Zhou Z, Zhang W, Chen M, Lin M, Wang J.	Microb Biotechnol	10.1111/1751-7915.13416	2019
Metabolism	PhoN-expressing, lyophilized, recombinant Deinococcus radiodurans cells for uranium bioprecipitation.	Appukuttan D, Seetharam C, Padma N, Rao AS, Apte SK.	J Biotechnol	10.1016/j.jbiotec.2011.05.002	2011
	Induction of bacterial expression at the mRNA level by light.	Ranzani AT, Buchholz K, Blackholm M, Kopkin H, Moglich A.	Nucleic Acids Res	10.1093/nar/gkae678	2024
Enzymology	Isolation and Characterization of Thermophilic Bacteria from a Hot Spring in the State of Hidalgo, Mexico, and Geochemical Analysis of the Thermal Water	Ortega-Villar R, Escalante A, Astudillo-Melgar F, Lizarraga-Mendiola L, Vazquez-Rodriguez G, Hidalgo-Lara M, Coronel-Olivares C.	Microorganisms		2024
Metabolism	ATP-dependent fructose uptake system in Deinococcus radiodurans.	Lee HY, Magotra M, Wong TY, Chakraborty C, Liu JK.	Appl Microbiol Biotechnol	10.1007/s00253-011-3514-x	2012
Metabolism	DNA binding is essential for PprI function in response to radiation damage in Deinococcus radiodurans.	Lu H, Chen H, Xu G, Shah AM, Hua Y.	DNA Repair (Amst)	10.1016/j.dnarep.2011.10.013	2012
	The emergence of molecular systems neuroscience.	Shen Y, Luchetti A, Fernandes G, Do Heo W, Silva AJ.	Mol Brain	10.1186/s13041-021-00885-5	2022
Metabolism	The role of Deinococcus radiodurans RecFOR proteins in homologous recombination.	Satoh K, Kikuchi M, Ishaque AM, Ohba H, Yamada M, Tejima K, Onodera T, Narumi I.	DNA Repair (Amst)	10.1016/j.dnarep.2012.01.008	2012
	Global effect of an RNA polymerase beta-subunit mutation on gene expression in the radiation-resistant bacterium Deinococcus radiodurans.	Hua X, Wang H, Wang C, Tian B, Hua Y.	Sci China Life Sci	10.1007/s11427-011-4209-3	2011
Pathogenicity	Use of Cotton Textiles Coated by Ir(III) Tetrazole Complexes within Ceramic Silica Nanophases for Photo-Induced Self-Marker and Antibacterial Application.	Zanoni I, Blosi M, Fiorini V, Crosera M, Ortelli S, Stagni S, Stefan A, Psilodimitrakopoulos S, Stratakis E, Larese Filon F, Costa AL.	Nanomaterials (Basel)	10.3390/nano10061020	2020
	Survival of Deinococcus radiodurans against laboratory-simulated solar wind charged particles.	Paulino-Lima IG, Janot-Pacheco E, Galante D, Cockell C, Olsson-Francis K, Brucato JR, Baratta GA, Strazzulla G, Merrigan T, McCullough R, Mason N, Lage C.	Astrobiology	10.1089/ast.2011.0649	2011
Pathogenicity	Special features of gram-positive bacterial eradication by photosensitizers.	Nitzan Y, Nisnevitch M.	Recent Pat Antiinfect Drug Discov	10.2174/1574891x113089990013	2013
	Modeling of phytochrome absorption spectra.	Falklof O, Durbeej B.	J Comput Chem	10.1002/jcc.23265	2013
Pathogenicity	Determinants of the species selectivity of oxazolidinone antibiotics targeting the large ribosomal subunit.	Saini JS, Homeyer N, Fulle S, Gohlke H.	Biol Chem	10.1515/hsz-2013-0188	2013
	"Pick-up Lines": A Fun Way to Facilitate Learning Microbiological Concepts.	Dela Cruz TE.	J Microbiol Biol Educ	10.1128/jmbe.v15i2.699	2014
Phylogeny	Accurate quantification of bacterial abundance in metagenomic DNAs accounting for variable DNA integrity levels.	Manzari C, Oranger A, Fosso B, Piancone E, Pesole G, D'Erchia AM.	Microb Genom	10.1099/mgen.0.000417	2020
	Comparative survival analysis of Deinococcus radiodurans and the haloarchaea Natrialba magadii and Haloferax volcanii exposed to vacuum ultraviolet irradiation.	Abrevaya XC, Paulino-Lima IG, Galante D, Rodrigues F, Mauas PJ, Corton E, Lage Cde A.	Astrobiology	10.1089/ast.2011.0607	2011
	Structural Studies of Pif1 Helicases from Thermophilic Bacteria.	Rety S, Zhang Y, Fu W, Wang S, Chen WF, Xi XG.	Microorganisms	10.3390/microorganisms11020479	2023
Genetics	Characterization of Tellurite Toxicity to Escherichia coli Under Aerobic and Anaerobic Conditions	Luraschi R, Munoz-Villagran C, Cornejo F, Pugin B, Tobar F, Sandoval J, Rivas-Pardo J, Vera C, Arenas F.	Int J Mol Sci		2025
	Protonation of the Biliverdin IXalpha Chromophore in the Red and Far-Red Photoactive States of a Bacteriophytochrome.	Modi V, Donnini S, Groenhof G, Morozov D.	J Phys Chem B	10.1021/acs.jpcb.9b01117	2019
	Purification, crystallization and preliminary crystallographic analysis of DR0248, an MNT-HEPN fused protein from Deinococcus radiodurans.	Pesce G, Pellegrino S, McSweeney S, Goncalves A, de Sanctis D.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x14025734	2015
Pathogenicity	Pigment-based whole-cell biosensor system for cadmium detection using genetically engineered Deinococcus radiodurans.	Joe MH, Lee KH, Lim SY, Im SH, Song HP, Lee IS, Kim DH.	Bioprocess Biosyst Eng	10.1007/s00449-011-0610-3	2012
	A bacterial expression cloning screen reveals single-stranded DNA-binding proteins as potent desicco-protectants.	Hibshman JD, Clark-Hachtel CM, Bloom KS, Goldstein B.	Cell Rep	10.1016/j.celrep.2024.114956	2024
Genetics	Radiolytic support for oxidative metabolism in an ancient subsurface brine system.	Nisson DM, Kieft TL, Castillo J, Perl SM, Onstott TC.	ISME Commun	10.1093/ismeco/ycae138	2024
Stress	Effect of relative humidity on Deinococcus radiodurans' resistance to prolonged desiccation, heat, ionizing, germicidal, and environmentally relevant UV radiation.	Bauermeister A, Moeller R, Reitz G, Sommer S, Rettberg P.	Microb Ecol	10.1007/s00248-010-9785-4	2011
	Photoreception and signaling in bacterial phytochrome revealed by single-particle cryo-EM.	Malla TN, Hernandez C, Muniyappan S, Menendez D, Bizhga D, Mendez JH, Schwander P, Stojkovic EA, Schmidt M.	Sci Adv	10.1126/sciadv.adq0653	2024
Enzymology	[Substrate specificity of carotenoid 3',4'-desaturase from Deinococcus radiodurans].	Sun Z, Tian B, Shen S, Hu Y.	Sheng Wu Gong Cheng Xue Bao		2010
	Selective 8-oxo-rG stalling occurs in the catalytic core of polynucleotide phosphorylase (PNPase) during degradation.	Miller LG, Kim W, Schowe S, Taylor K, Han R, Jain V, Park R, Sherman M, Fang J, Ramirez H, Ellington A, Tamamis P, Resendiz MJE, Zhang YJ, Contreras L.	Proc Natl Acad Sci U S A	10.1073/pnas.2317865121	2024
Metabolism	Characterization of the role of the RadS/RadR two-component system in the radiation resistance of Deinococcus radiodurans.	Desai SS, Rajpurohit YS, Misra HS, Deobagkar DN.	Microbiology (Reading)	10.1099/mic.0.049361-0	2011
Metabolism	Characterization of the role of DR0171 in transcriptional response to radiation in the extremely radioresistant bacterium Deinococcus radiodurans.	Lu H, Xia W, Chen H, Yin L, Zhao X, Xu G, Hua Y.	Arch Microbiol	10.1007/s00203-011-0712-y	2011
	Aspergillus niger Spores Are Highly Resistant to Space Radiation.	Cortesao M, de Haas A, Unterbusch R, Fujimori A, Schutze T, Meyer V, Moeller R.	Front Microbiol	10.3389/fmicb.2020.00560	2020
Genetics	Genome Analysis of the Enterococcus faecium Entfac.YE Prophage.	Elahi Y, Mazaheri Nezhad Fard R, Seifi A, Mahfouzi S, Saboor Yaraghi AA.	Avicenna J Med Biotechnol	10.18502/ajmb.v14i1.8170	2022
Metabolism	Characterization of DRA0282 from Deinococcus radiodurans for its role in bacterial resistance to DNA damage.	Das AD, Misra HS.	Microbiology (Reading)	10.1099/mic.0.040436-0	2011
	KdpD is a tandem serine histidine kinase that controls K⁺ pump KdpFABC transcriptionally and post-translationally.	Silberberg JM, Ketter S, Bohm PJN, Jordan K, Wittenberg M, Grass J, Hanelt I.	Nat Commun	10.1038/s41467-024-47526-8	2024
	Investigating the biological potential of galactic cosmic ray-induced radiation-driven chemical disequilibrium in the Martian subsurface environment.	Atri D.	Sci Rep	10.1038/s41598-020-68715-7	2020
Enzymology	Fluorescence imaging of microbe-containing particles shot from a two-stage Light-gas gun into an aerogel.	Kawaguchi Y, Sugino T, Tabata M, Okudaira K, Imai E, Yano H, Hasegawa S, Hashimoto H, Yabuta H, Kobayashi K, Kawai H, Mita H, Yokobori S, Yamagishi A.	Orig Life Evol Biosph	10.1007/s11084-014-9361-x	2014
Metabolism	Transmembrane helix 6b links proton and metal release pathways and drives conformational change in an Nramp-family transition metal transporter.	Bozzi AT, McCabe AL, Barnett BC, Gaudet R.	J Biol Chem	10.1074/jbc.ra119.011336	2020
Pathogenicity	Genome-wide response of Deinococcus radiodurans on cadmium toxicity.	Joe MH, Jung SW, Im SH, Lim SY, Song HP, Kwon O, Kim DH.	J Microbiol Biotechnol	10.4014/jmb.1012.12021	2011
	Comprehensive Review on Bimolecular Fluorescence Complementation and Its Application in Deciphering Protein-Protein Interactions in Cell Signaling Pathways.	Ren H, Ou Q, Pu Q, Lou Y, Yang X, Han Y, Liu S.	Biomolecules	10.3390/biom14070859	2024
Enzymology	Design and comparative characterization of RecA variants.	Del Val E, Nasser W, Abaibou H, Reverchon S.	Sci Rep	10.1038/s41598-021-00589-9	2021
	Pigment-protein interactions in phytochromes probed by fluorescence line narrowing spectroscopy.	Nieder JB, Stojkovic EA, Moffat K, Forest KT, Lamparter T, Bittl R, Kennis JT.	J Phys Chem B	10.1021/jp409110q	2013
Metabolism	Improved osmotic tolerance and ethanol production of ethanologenic Escherichia coli by IrrE, a global regulator of radiation-resistance of Deinococcus radiodurans.	Ma R, Zhang Y, Hong H, Lu W, Lin M, Chen M, Zhang W.	Curr Microbiol	10.1007/s00284-010-9759-2	2011
Enzymology	RecA protein assures fidelity of DNA repair and genome stability in Deinococcus radiodurans.	Repar J, Cvjetan S, Slade D, Radman M, Zahradka D, Zahradka K.	DNA Repair (Amst)	10.1016/j.dnarep.2010.08.003	2010
	Mechanistic Studies of 1-Deoxy-D-Xylulose-5-Phosphate Synthase from Deinococcus radiodurans.	Handa S, Dempsey DR, Ramamoorthy D, Cook N, Guida WC, Spradling TJ, White JK, Woodcock HL, Merkler DJ.	Biochem Mol Biol J	10.21767/2471-8084.100051	2018
	The two-component response regulator OrrA confers dehydration tolerance by regulating avaKa expression in the cyanobacterium Anabaena sp. strain PCC 7120.	Kimura S, Sato M, Fan X, Ohmori M, Ehira S.	Environ Microbiol	10.1111/1462-2920.16162	2022
	Plant-Microbe Interactions under the Extreme Habitats and Their Potential Applications.	Tiwari P, Bose SK, Park KI, Dufosse L, Fouillaud M.	Microorganisms	10.3390/microorganisms12030448	2024
	The regulation mechanism of the C-terminus of RecA proteins during DNA strand-exchange process.	Fan HF, Su S.	Biophys J	10.1016/j.bpj.2021.06.004	2021
Enzymology	Deinococcus radiodurans HD-Pnk, a Nucleic Acid End-Healing Enzyme, Abets Resistance to Killing by Ionizing Radiation and Mitomycin C.	Schmier BJ, Shuman S.	J Bacteriol	10.1128/jb.00151-18	2018
Metabolism	LUD, a new protein domain associated with lactate utilization.	Hwang WC, Bakolitsa C, Punta M, Coggill PC, Bateman A, Axelrod HL, Rawlings ND, Sedova M, Peterson SN, Eberhardt RY, Aravind L, Pascual J, Godzik A.	BMC Bioinformatics	10.1186/1471-2105-14-341	2013
	Current overview of the mechanistic pathways and influence of physicochemical parameters on the microbial synthesis and applications of metallic nanoparticles.	Bhatnagar S, Aoyagi H.	Bioprocess Biosyst Eng	10.1007/s00449-025-03190-w	2025
Enzymology	Circular dichroism studies on the Deinococcus radiodurans Nudix hydrolase DR_0079: an atypical thermal melt.	Buchko GW.	Protein Pept Lett	10.2174/092986610791306689	2010
	A Hydrogel Sensing Pathological Urate Concentrations.	Geraths C, Christen EH, Weber W.	Macromol Rapid Commun	10.1002/marc.201200563	2012
	Genome-wide transcriptome and proteome analysis of Escherichia coli expressing IrrE, a global regulator of Deinococcus radiodurans.	Zhou Z, Zhang W, Chen M, Pan J, Lu W, Ping S, Yan Y, Hou X, Yuan M, Zhan Y, Lin M.	Mol Biosyst	10.1039/c0mb00336k	2011
	A microaerobically induced small heat shock protein contributes to Rhizobium leguminosarum/Pisum sativum symbiosis and interacts with a wide range of bacteroid proteins.	Domingo-Serrano L, Sanchis-Lopez C, Alejandre C, Soldek J, Palacios JM, Albareda M.	Appl Environ Microbiol	10.1128/aem.01385-24	2025
	CeO₂ Nanoparticles-Regulated Plasmid Uptake and Bioavailability for Reducing Transformation of Extracellular Antibiotic Resistance Genes.	Xu Y, Du H, Wang C, Yue L, Chen F, Wang Z.	Nanomaterials (Basel)	10.3390/nano13060969	2023
	Long-Distance Protonation-Conformation Coupling in Phytochrome Species.	Sadeghi M, Balke J, Rafaluk-Mohr T, Alexiev U.	Molecules	10.3390/molecules27238395	2022
	Physiology of Highly Radioresistant Escherichia coli After Experimental Evolution for 100 Cycles of Selection.	Bruckbauer ST, Martin J, Minkoff BB, Veling MT, Lancaster I, Liu J, Trimarco JD, Bushnell B, Lipzen A, Wood EA, Sussman MR, Pennacchio C, Cox MM.	Front Microbiol	10.3389/fmicb.2020.582590	2020
	Response of Deinococcus radiodurans to low-pressure low-temperature plasma sterilization processes.	Roth S, Feichtinger J, Hertel C.	J Appl Microbiol	10.1111/j.1365-2672.2010.04771.x	2010
	Exploring Novel Fungal-Bacterial Consortia for Enhanced Petroleum Hydrocarbon Degradation.	Silva Monteiro JP, da Silva AF, Delgado Duarte RT, Jose Giachini A.	Toxics	10.3390/toxics12120913	2024
	Enhancement of Repeat-Mediated Deletion Rearrangement Induced by Particle Irradiation in a RecA-Dependent Manner in Escherichia coli.	Hou Z, Xu Z, Wu M, Ma L, Sui L, Bian P, Wang T.	Biology (Basel)	10.3390/biology12111406	2023
Metabolism	Comparative proteomics reveals key proteins recruited at the nucleoid of Deinococcus after irradiation-induced DNA damage.	de la Tour CB, Passot FM, Toueille M, Mirabella B, Guerin P, Blanchard L, Servant P, de Groot A, Sommer S, Armengaud J.	Proteomics	10.1002/pmic.201300249	2013
Enzymology	Gene cloning and protein expression of gamma-glutamyltranspeptidases from Thermus thermophilus and Deinococcus radiodurans: comparison of molecular and structural properties with mesophilic counterparts.	Castellano I, Di Salle A, Merlino A, Rossi M, La Cara F.	Extremophiles	10.1007/s00792-011-0355-6	2011
	Structural analysis of the housecleaning nucleoside triphosphate pyrophosphohydrolase MazG from Mycobacterium tuberculosis.	Wang S, Gao B, Chen A, Zhang Z, Wang S, Lv L, Zhao G, Li J.	Front Microbiol	10.3389/fmicb.2023.1137279	2023
	Development of a qualitative dose indicator for gamma radiation using lyophilized Deinococcus.	Lim S, Song D, Joe M, Kim D.	J Microbiol Biotechnol	10.4014/jmb.1202.02039	2012
	Genome-wide mapping of N ⁴-methylcytosine at single-base resolution by APOBEC3A-mediated deamination sequencing.	Xiong J, Wang P, Shao WX, Li G, Ding JH, Xie NB, Wang M, Cheng QY, Xie C, Feng YQ, Ci W, Yuan BF.	Chem Sci	10.1039/d2sc02446b	2022
	De novo sequencing of tryptic peptides derived from Deinococcus radiodurans ribosomal proteins using 157 nm photodissociation MALDI TOF/TOF mass spectrometry.	Zhang L, Reilly JP.	J Proteome Res	10.1021/pr901206j	2010
Phylogeny	Excavating the functionally crucial active-site residues of the DXS protein of Bacillus subtilis by exploring its closest homologues.	Runthala A, Sai TH, Kamjula V, Phulara SC, Rajput VS, Sangapillai K.	J Genet Eng Biotechnol	10.1186/s43141-020-00087-x	2020
Metabolism	A Colorimetric Microplate Assay for DNA-Binding Activity of His-Tagged MutS Protein.	Banasik M, Sachadyn P.	Mol Biotechnol	10.1007/s12033-016-9949-7	2016
	Mapping the ultrastructural topology of the corynebacterial cell surface.	Isbilir B, Yeates A, Alva V, Bharat TAM.	PLoS Biol	10.1371/journal.pbio.3003130	2025
Metabolism	ATP-type DNA ligase requires other proteins for its activity in vitro and its operon components for radiation resistance in Deinococcus radiodurans in vivo.	Kota S, Kamble VA, Rajpurohit YS, Misra HS.	Biochem Cell Biol	10.1139/o10-075	2010
	Mechanism of furfural toxicity and metabolic strategies to engineer tolerance in microbial strains.	Jilani SB, Olson DG.	Microb Cell Fact	10.1186/s12934-023-02223-x	2023
	Extremophilic microbial metabolism and radioactive waste disposal.	Butterworth SJ, Barton F, Lloyd JR.	Extremophiles	10.1007/s00792-023-01312-4	2023
Phylogeny	Isolation of Thermovenabulum gondwanense from a French hot spring and emended description of the species.	Pradel N, Bartoli M, Bernadac A, Gimenez G, Ollivier B, Fardeau ML.	Antonie Van Leeuwenhoek	10.1007/s10482-013-9947-8	2013
Metabolism	DRA0336, another OxyR homolog, involved in the antioxidation mechanisms in Deinococcus radiodurans.	Yin L, Wang L, Lu H, Xu G, Chen H, Zhan H, Tian B, Hua Y.	J Microbiol	10.1007/s12275-010-0043-8	2010
Metabolism	DdrB stimulates single-stranded DNA annealing and facilitates RecA-independent DNA repair in Deinococcus radiodurans.	Xu G, Lu H, Wang L, Chen H, Xu Z, Hu Y, Tian B, Hua Y.	DNA Repair (Amst)	10.1016/j.dnarep.2010.04.006	2010
Enzymology	Purification, crystallization and phase determination of the DR1998 haem b catalase from Deinococcus radiodurans.	Borges PT, Miranda CS, Santos SP, Carita JN, Frazao C, Romao CV.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x1400764x	2014
Metabolism	Substrate specificity of bacterial endoribonuclease toxins.	Han Y, Lee EJ.	BMB Rep		2020
Enzymology	Characterization of a DNA damage-inducible membrane protein kinase from Deinococcus radiodurans and its role in bacterial radioresistance and DNA strand break repair.	Rajpurohit YS, Misra HS.	Mol Microbiol	10.1111/j.1365-2958.2010.07301.x	2010
	Light-induced structural changes in a full-length cyanobacterial phytochrome probed by time-resolved X-ray scattering.	Heyes DJ, Hardman SJO, Pedersen MN, Woodhouse J, De La Mora E, Wulff M, Weik M, Cammarata M, Scrutton NS, Schiro G.	Commun Biol	10.1038/s42003-018-0242-0	2019
	Bacterial Phytochrome as a Scaffold for Engineering of Receptor Tyrosine Kinases Controlled with Near-Infrared Light.	Leopold AV, Pletnev S, Verkhusha VV.	J Mol Biol	10.1016/j.jmb.2020.04.005	2020
	Platinum nanoparticles: an exquisite tool to overcome radioresistance.	Li S, Porcel E, Remita H, Marco S, Refregiers M, Dutertre M, Confalonieri F, Lacombe S.	Cancer Nanotechnol	10.1186/s12645-017-0028-y	2017
	Influence of external bacterial structures on the efficiency of photodynamic inactivation by a cationic porphyrin.	Pereira MA, Faustino MA, Tome JP, Neves MG, Tome AC, Cavaleiro JA, Cunha A, Almeida A.	Photochem Photobiol Sci	10.1039/c3pp50408e	2014
Enzymology	Novel 3-O-carbamoyl erythromycin A derivatives (carbamolides) with activity against resistant staphylococcal and streptococcal isolates.	Magee TV, Han S, McCurdy SP, Nguyen TT, Granskog K, Marr ES, Maguire BA, Huband MD, Chen JM, Subashi TA, Shanmugasundaram V.	Bioorg Med Chem Lett	10.1016/j.bmcl.2013.01.067	2013
Metabolism	Characterization of an ATP-regulated DNA-processing enzyme and thermotolerant phosphoesterase in the radioresistant bacterium Deinococcus radiodurans.	Kota S, Kumar CV, Misra HS.	Biochem J	10.1042/bj20100446	2010
Enzymology	Principles of Cold Adaptation of Fish Lactate Dehydrogenases Revealed by Computer Simulations of the Catalytic Reaction.	Koenekoop L, Aqvist J.	Mol Biol Evol	10.1093/molbev/msad099	2023
Metabolism	Effects of radiation quality on interactions between oxidative stress, protein and DNA damage in Deinococcus radiodurans.	Shuryak I, Brenner DJ.	Radiat Environ Biophys	10.1007/s00411-010-0305-1	2010
	Effects of Ionizing Radiation and Long-Term Storage on Hydrated vs. Dried Cell Samples of Extremophilic Microorganisms.	Romano I, Camerlingo C, Vaccari L, Birarda G, Poli A, Fujimori A, Lepore M, Moeller R, Di Donato P.	Microorganisms	10.3390/microorganisms10010190	2022
	Isolation and characterization of a main porin from the outer membrane of Salinibacter ruber.	Farci D, Cocco E, Tanas M, Kirkpatrick J, Maxia A, Tamburini E, Schroder WP, Piano D.	J Bioenerg Biomembr	10.1007/s10863-022-09950-7	2022
Phylogeny	Genomic GC-Content Affects the Accuracy of 16S rRNA Gene Sequencing Based Microbial Profiling due to PCR Bias.	Laursen MF, Dalgaard MD, Bahl MI.	Front Microbiol	10.3389/fmicb.2017.01934	2017
	Involvement of recF in 254 nm ultraviolet radiation resistance in Deinococcus radiodurans and Escherichia coli.	Chang X, Yang L, Zhao Q, Fu W, Chen H, Qiu Z, Chen JA, Hu R, Shu W.	Curr Microbiol	10.1007/s00284-010-9638-x	2010
	Structural and functional characterization of an SMC-like protein RecN: new insights into double-strand break repair.	Pellegrino S, Radzimanowski J, de Sanctis D, Boeri Erba E, McSweeney S, Timmins J.	Structure	10.1016/j.str.2012.09.010	2012
Enzymology	Noncanonical prokaryotic X family DNA polymerases lack polymerase activity and act as exonucleases.	Prostova M, Shilkin E, Kulikova AA, Makarova A, Ryazansky S, Kulbachinskiy A.	Nucleic Acids Res	10.1093/nar/gkac461	2022
	Structural Insights of the DciA Helicase Loader in Its Relationship with DNA.	Cargemel C, Baconnais S, Aumont-Nicaise M, Noiray M, Maurin L, Andreani J, Walbott H, Le Cam E, Ochsenbein F, Marsin S, Quevillon-Cheruel S.	Int J Mol Sci	10.3390/ijms24021427	2023
	Gre Factors Are Required for Biofilm Formation in Salmonella enterica Serovar Typhimurium by Targeting Transcription of the csgD Gene.	Gaviria-Cantin T, Vargas AF, Mouali YE, Jimenez CJ, Cimdins-Ahne A, Madrid C, Romling U, Balsalobre C.	Microorganisms	10.3390/microorganisms10101921	2022
Enzymology	Isolation of Radiation-Resistant Bacteria from Mars Analog Antarctic Dry Valleys by Preselection, and the Correlation between Radiation and Desiccation Resistance.	Musilova M, Wright G, Ward JM, Dartnell LR.	Astrobiology	10.1089/ast.2014.1278	2015
	Chronic low-dose rate irradiation induces transient hormesis effect on cyanobacterium Limnospira indica.	Fahrion J, Gupta S, Mastroleo F, Dussap CG, Leys N.	iScience	10.1016/j.isci.2025.111891	2025
	Structure and nature of manganese(II) imidazole complexes in frozen aqueous solutions.	Un S.	Inorg Chem	10.1021/ic302415s	2013
	The possible interplanetary transfer of microbes: assessing the viability of Deinococcus spp. under the ISS Environmental conditions for performing exposure experiments of microbes in the Tanpopo mission.	Kawaguchi Y, Yang Y, Kawashiri N, Shiraishi K, Takasu M, Narumi I, Satoh K, Hashimoto H, Nakagawa K, Tanigawa Y, Momoki YH, Tanabe M, Sugino T, Takahashi Y, Shimizu Y, Yoshida S, Kobayashi K, Yokobori S, Yamagishi A.	Orig Life Evol Biosph	10.1007/s11084-013-9346-1	2013
Metabolism	Increased synthesis of signaling molecules coincides with reversible inhibition of nucleolytic activity during postirradiation recovery of Deinococcus radiodurans.	Kamble VA, Rajpurohit YS, Srivastava AK, Misra HS.	FEMS Microbiol Lett	10.1111/j.1574-6968.2009.01855.x	2010
	[Expression of gene recA of Deinococcus radiodurans in Escherichia coli cells].	Verbenko VN, Kuznetsova LV, Krup'ian EP, Shalguev VI.	Genetika	10.1134/s1022795409100068	2009
	Low-temperature ionizing radiation resistance of Deinococcus radiodurans and Antarctic Dry Valley bacteria.	Dartnell LR, Hunter SJ, Lovell KV, Coates AJ, Ward JM.	Astrobiology	10.1089/ast.2009.0439	2010
	Comparative Assessment of Docking Programs for Docking and Virtual Screening of Ribosomal Oxazolidinone Antibacterial Agents.	Buckley ME, Ndukwe ARN, Nair PC, Rana S, Fairfull-Smith KE, Gandhi NS.	Antibiotics (Basel)	10.3390/antibiotics12030463	2023
	Structural basis of transcriptional regulation by UrtR in response to uric acid.	Song WS, Ki DU, Cho HY, Kwon OH, Cho H, Yoon SI.	Nucleic Acids Res	10.1093/nar/gkae922	2024
Pathogenicity	Roles of PprA, IrrE, and RecA in the resistance of Deinococcus radiodurans to germicidal and environmentally relevant UV radiation.	Bauermeister A, Bentchikou E, Moeller R, Rettberg P.	Arch Microbiol	10.1007/s00203-009-0522-7	2009
	Multiplicity of Quorum Quenching Enzymes: A Potential Mechanism to Limit Quorum Sensing Bacterial Population.	Koul S, Kalia VC.	Indian J Microbiol	10.1007/s12088-016-0633-1	2017
	Genome Signature Difference between Deinococcus radiodurans and Thermus thermophilus.	Nishida H, Abe R, Nagayama T, Yano K.	Int J Evol Biol	10.1155/2012/205274	2012
Enzymology	Structural-dynamical properties of the Deinococcus radiodurans topoisomerase IB in absence of DNA: correlation with the human enzyme.	Ilda D, Giovanni C, Alessandro D.	J Biomol Struct Dyn	10.1080/07391102.2009.10507318	2009
	Structure-based discovery of first inhibitors targeting the helicase activity of human PIF1.	Wever MJA, Scommegna FR, Egea-Rodriguez S, Dehghani-Tafti S, Brandao-Neto J, Poisson JF, Helfrich I, Antson AA, Rodeschini V, Bax B, Roche D, Sanders CM.	Nucleic Acids Res	10.1093/nar/gkae897	2024
	Deinococcus radiodurans Toxin-Antitoxin MazEF-dr Mediates Cell Death in Response to DNA Damage Stress.	Li T, Weng Y, Ma X, Tian B, Dai S, Jin Y, Liu M, Li J, Yu J, Hua Y.	Front Microbiol	10.3389/fmicb.2017.01427	2017
	Chemical contrast in soft x-ray ptychography.	Beckers M, Senkbeil T, Gorniak T, Reese M, Giewekemeyer K, Gleber SC, Salditt T, Rosenhahn A.	Phys Rev Lett	10.1103/physrevlett.107.208101	2011
	Evolution of termination codons of proteins and the TAG-TGA paradox.	Trexler M, Banyai L, Kerekes K, Patthy L.	Sci Rep	10.1038/s41598-023-41410-z	2023
Metabolism	The DnaE polymerase from Deinococcus radiodurans features RecA-dependent DNA polymerase activity.	Randi L, Perrone A, Maturi M, Dal Piaz F, Camerani M, Hochkoeppler A.	Biosci Rep	10.1042/bsr20160364	2016
	Background Mutational Features of the Radiation-Resistant Bacterium Deinococcus radiodurans.	Long H, Kucukyildirim S, Sung W, Williams E, Lee H, Ackerman M, Doak TG, Tang H, Lynch M.	Mol Biol Evol	10.1093/molbev/msv119	2015
	Structure-based interface engineering methodology in designing a thermostable amylose-forming transglucosylase.	Tian Y, Hou X, Ni D, Xu W, Guang C, Zhang W, Chen Q, Rao Y, Mu W.	J Biol Chem	10.1016/j.jbc.2022.102074	2022
Metabolism	Bioremediation of endocrine disruptor di-n-butyl phthalate ester by Deinococcus radiodurans and Pseudomonas stutzeri.	Liao CS, Chen LC, Chen BS, Lin SH.	Chemosphere	10.1016/j.chemosphere.2009.10.020	2010
	PerR-Regulated Manganese Import Contributes to Oxidative Stress Defense in Streptococcus suis.	Peng W, Peng W, Yang X, Wang N, Gao T, Liu Z, Liu W, Zhou D, Yang K, Guo R, Liang W, Chen H, Tian Y, Yuan F, Bei W.	Appl Environ Microbiol	10.1128/aem.00086-22	2022
	Naturally occurring fluorescence protects the eutardigrade Paramacrobiotus sp. from ultraviolet radiation.	Suma HR, Prakash S, Eswarappa SM.	Biol Lett	10.1098/rsbl.2020.0391	2020
Enzymology	Crystal structure of Deinococcus radiodurans RecQ helicase catalytic core domain: the interdomain flexibility.	Chen SC, Huang CH, Yang CS, Way TD, Chang MC, Chen Y.	Biomed Res Int	10.1155/2014/342725	2014
Enzymology	Expression, purification and crystallization of two endonuclease III enzymes from Deinococcus radiodurans.	Sarre A, Okvist M, Klar T, Moe E, Timmins J.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x14024935	2014
	Functional roles of N-terminal and C-terminal domains in the overall activity of a novel single-stranded DNA binding protein of Deinococcus radiodurans.	Ujaoney AK, Basu B, Muniyappa K, Apte SK.	FEBS Open Bio	10.1016/j.fob.2015.04.009	2015
Metabolism	The SbcCD complex of Deinococcus radiodurans contributes to radioresistance and DNA strand break repair in vivo and exhibits Mre11-Rad50 type activity in vitro.	Kamble VA, Misra HS.	DNA Repair (Amst)	10.1016/j.dnarep.2010.01.012	2010
Metabolism	Involvement of RecG in H2O2-induced damage repair in Deinococcus radiodurans.	Wu Y, Chen W, Zhao Y, Xu H, Hua Y.	Can J Microbiol	10.1139/w09-028	2009
Metabolism	Death by protein damage in irradiated cells.	Daly MJ.	DNA Repair (Amst)	10.1016/j.dnarep.2011.10.024	2012
	Genome-wide identification and evolutionary analysis of the NRAMP gene family in the AC genomes of Brassica species.	Zhao Y, Xie Q, Yang Q, Cui J, Tan W, Zhang D, Xiang J, Deng L, Guo Y, Li M, Liu L, Yan M.	BMC Plant Biol	10.1186/s12870-024-04981-1	2024
Enzymology	Microbial challenge tests on nonradioactive TiO2-based 68Ge/68Ga generator columns.	Petrik M, Schuessele A, Perkhofer S, Lass-Florl C, Becker D, Decristoforo C.	Nucl Med Commun	10.1097/mnm.0b013e3283543323	2012
Enzymology	Expression, purification, crystallization and preliminary X-ray analysis of the RecQ helicase catalytic core from Deinococcus radiodurans.	Chen SC, Huang CH, Yang CS, Chang CH, Kuan SM, Chan NL, Chen Y.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309112037517	2012
Metabolism	Modular Assembly of Ordered Hydrophilic Proteins Improve Salinity Tolerance in Escherichia coli.	Guo L, Zhao M, Tang Y, Han J, Gui Y, Ge J, Jiang S, Dai Q, Zhang W, Lin M, Zhou Z, Wang J.	Int J Mol Sci	10.3390/ijms22094482	2021
	Exploring the Specificity of Rationally Designed Peptides Reconstituted from the Cell-Free Extract of Deinococcus radiodurans toward Mn(II) and Cu(II).	Peana M, Gumienna-Kontecka E, Piras F, Ostrowska M, Piasta K, Krzywoszynska K, Medici S, Zoroddu MA.	Inorg Chem	10.1021/acs.inorgchem.9b03737	2020
	Classical and novel properties of Holliday junction resolvase SynRuvC from Synechocystis sp. PCC6803.	Gu Y, Yang Y, Kou C, Peng Y, Yang W, Zhang J, Jin H, Han X, Wang Y, Shen X.	Front Microbiol	10.3389/fmicb.2024.1362880	2024
Metabolism	Recombinant D. radiodurans cells for bioremediation of heavy metals from acidic/neutral aqueous wastes.	Misra CS, Appukuttan D, Kantamreddi VS, Rao AS, Apte SK.	Bioeng Bugs	10.4161/bbug.3.1.18878	2012
Enzymology	DNA polymerase X from Deinococcus radiodurans implicated in bacterial tolerance to DNA damage is characterized as a short patch base excision repair polymerase.	Khairnar NP, Misra HS.	Microbiology (Reading)	10.1099/mic.0.029223-0	2009
Metabolism	Analysis of the recJ gene and protein from Deinococcus radiodurans.	Cao Z, Mueller CW, Julin DA.	DNA Repair (Amst)	10.1016/j.dnarep.2009.10.009	2010
Metabolism	Deletion of the rnl gene encoding a nick-sealing RNA ligase sensitizes Deinococcus radiodurans to ionizing radiation.	Schmier BJ, Chen X, Wolin S, Shuman S.	Nucleic Acids Res	10.1093/nar/gkx038	2017
Metabolism	irrE, an exogenous gene from Deinococcus radiodurans, improves the growth of and ethanol production by a Zymomonas mobilis strain under ethanol and acid stress.	Zhang Y, Ma R, Zhao Z, Zhou Z, Lu W, Zhang W, Chen M.	J Microbiol Biotechnol	10.4014/jmb.0912.12036	2010
Metabolism	DR2539 is a novel DtxR-like regulator of Mn/Fe ion homeostasis and antioxidant enzyme in Deinococcus radiodurans.	Chen H, Wu R, Xu G, Fang X, Qiu X, Guo H, Tian B, Hua Y.	Biochem Biophys Res Commun	10.1016/j.bbrc.2010.04.106	2010
Metabolism	Functional analysis of gamma-carotene ketolase involved in the carotenoid biosynthesis of Deinococcus radiodurans.	Sun Z, Shen S, Tian B, Wang H, Xu Z, Wang L, Hua Y.	FEMS Microbiol Lett	10.1111/j.1574-6968.2009.01794.x	2009
Enzymology	Expression, purification, crystallization and preliminary X-ray diffraction analysis of acylpeptide hydrolase from Deinococcus radiodurans.	Are VN, Ghosh B, Kumar A, Yadav P, Bhatnagar D, Jamdar SN, Makde RD.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x14017944	2014
Metabolism	Characteristics of nuclease activity of the SbcCD complex from Deinococcus radiodurans.	Hu Y, Tian B, Xu G, Yin L, Hua X, Lin J, Hua Y.	J Biochem	10.1093/jb/mvp180	2010
Metabolism	Legionella pneumophila temporally regulates the activity of ADP/ATP translocases by reversible ADP-ribosylation.	Fu J, Li P, Guan H, Huang D, Song L, Ouyang S, Luo ZQ.	mLife	10.1002/mlf2.12014	2022
Metabolism	Both OB folds of single-stranded DNA-binding protein are essential for its ssDNA binding activity in Deinococcus radiodurans.	Hua X, Wang C, Zhao Y, Wang H, Huang L, Xu G, Li M, Wang Y, Tian B, Hua Y.	Protein Pept Lett	10.2174/092986610792231438	2010
	Biophysical characterization and mutational analysis of the antibiotic resistance protein NimA from Deinococcus radiodurans.	Leiros HK, Brandsdal BO, McSweeney SM.	Biochim Biophys Acta	10.1016/j.bbapap.2010.01.010	2010
	Structural insights into Cdc45 function: was there a nuclease at the heart of the ancestral replisome?	Pellegrini L.	Biophys Chem	10.1016/j.bpc.2016.11.011	2017
	A Robust Metatranscriptomic Technology for Population-Scale Studies of Diet, Gut Microbiome, and Human Health.	Hatch A, Horne J, Toma R, Twibell BL, Somerville KM, Pelle B, Canfield KP, Genkin M, Banavar G, Perlina A, Messier H, Klitgord N, Vuyisich M.	Int J Genomics	10.1155/2019/1718741	2019
	Isolation and cloning of the endoglucanase gene from Bacillus pumilus and its expression in Deinococcus radiodurans.	Telang S, Patel P, Sarangdhar V, Donde S.	3 Biotech	10.1007/s13205-013-0127-3	2014
Metabolism	Ribosomal proteins of Deinococcus radiodurans: their solvent accessibility and reactivity.	Running WE, Reilly JP.	J Proteome Res	10.1021/pr800544y	2009
	Pleiotropic effects of RecQ in Deinococcus radiodurans.	Chen H, Huang L, Hua X, Yin L, Hu Y, Wang C, Chen W, Yu X, Xu Z, Tian B, Hu S, Hua Y.	Genomics	10.1016/j.ygeno.2009.08.001	2009
	Host-bacteriome transplants of the schistosome snail host Biomphalaria glabrata reflect species-specific associations.	Schols R, Vanoverberghe I, Huyse T, Decaestecker E.	FEMS Microbiol Ecol	10.1093/femsec/fiad101	2023
Stress	Dramatic loss of microbial viability in bentonite exposed to heat and gamma radiation: implications for deep geological repository.	Bartak D, Sachlova S, Kaspar V, Riha J, Dobrev D, Vecernik P, Hlavackova V, Matulova M, Cerna K.	World J Microbiol Biotechnol	10.1007/s11274-024-04069-w	2024
Pathogenicity	A Frog Skin-Derived Peptide Targeting SCD1 Exerts Radioprotective Effects Against Skin Injury by Inhibiting STING-Mediated Inflammation.	Geng F, Zhong L, Yang T, Chen J, Yang P, Jiang F, Yan T, Song B, Yu Z, Yu D, Zhang J, Cao J, Zhang S.	Adv Sci (Weinh)	10.1002/advs.202306253	2024
	Identification of NpdA as the protein forming the surface layer in Paracidovorax citrulli and evidence of its occurrence as a surface layer protein in diverse genera of the Betaproteobacteria and Gammaproteobacteria.	Gajbhiye S, Gonzales ED, Toso DB, Kirk NA, Hickey WJ.	Access Microbiol	10.1099/acmi.0.000685.v3	2023
	Bacterial molecular machinery in the Martian cryosphere conditions.	Munoz-Hisado V, Ruiz-Blas F, Sobrado JM, Garcia-Lopez E, Martinez-Alonso E, Alcazar A, Cid C.	Front Microbiol	10.3389/fmicb.2023.1176582	2023
	Assembly-mediated activation of the SIR2-HerA supramolecular complex for anti-phage defense.	Shen Z, Lin Q, Yang XY, Fosuah E, Fu TM.	Mol Cell	10.1016/j.molcel.2023.11.007	2023
	Structural and functional characterization of DdrC, a novel DNA damage-induced nucleoid associated protein involved in DNA compaction.	Banneville AS, Bouthier de la Tour C, De Bonis S, Hognon C, Colletier JP, Teulon JM, Le Roy A, Pellequer JL, Monari A, Dehez F, Confalonieri F, Servant P, Timmins J.	Nucleic Acids Res	10.1093/nar/gkac563	2022
Enzymology	[A new approach for study of structural and functional properties of proteins with unknown functions].	Gorbacheva MA, Iarosh AG, Dorovatovskii PV, Rakitina TV, Boiko KM, Korzhenevskii DA, Lipkin AV, Popov VO, Shumilin IA.	Bioorg Khim	10.1134/s1068162012010098	2012
Metabolism	The Deinococcus radiodurans SMC protein is dispensable for cell viability yet plays a role in DNA folding.	Bouthier de la Tour C, Toueille M, Jolivet E, Nguyen HH, Servant P, Vannier F, Sommer S.	Extremophiles	10.1007/s00792-009-0270-2	2009
	Unlocking the Potential of Nano-Enabled Precision Agriculture for Efficient and Sustainable Farming.	Goyal V, Rani D, Ritika, Mehrotra S, Deng C, Wang Y.	Plants (Basel)	10.3390/plants12213744	2023
	Evidence for a chromosome origin unwinding system broadly conserved in bacteria.	Pelliciari S, Dong MJ, Gao F, Murray H.	Nucleic Acids Res	10.1093/nar/gkab560	2021
Metabolism	Global regulator engineering significantly improved Escherichia coli tolerances toward inhibitors of lignocellulosic hydrolysates.	Wang J, Zhang Y, Chen Y, Lin M, Lin Z.	Biotechnol Bioeng	10.1002/bit.24574	2012
	A tamB homolog is involved in maintenance of cell envelope integrity and stress resistance of Deinococcus radiodurans.	Yu J, Li T, Dai S, Weng Y, Li J, Li Q, Xu H, Hua Y, Tian B.	Sci Rep	10.1038/srep45929	2017
Metabolism	TbsP and TrmB jointly regulate gapII to influence cell development phenotypes in the archaeon Haloferax volcanii.	Hackley RK, Hwang S, Herb JT, Bhanap P, Lam K, Vreugdenhil A, Darnell CL, Pastor MM, Martin JH, Maupin-Furlow JA, Schmid AK.	Mol Microbiol	10.1111/mmi.15225	2024
	Dynamics-driven allosteric stimulation of diguanylate cyclase activity in a red light-regulated phytochrome.	Tran QH, Eder OM, Winkler A.	J Biol Chem	10.1016/j.jbc.2024.107217	2024
	Recombination and replication in DNA repair of heavily irradiated Deinococcus radiodurans.	Slade D, Lindner AB, Paul G, Radman M.	Cell	10.1016/j.cell.2009.01.018	2009
	Insight into the strong antioxidant activity of deinoxanthin, a unique carotenoid in Deinococcus radiodurans.	Ji HF.	Int J Mol Sci	10.3390/ijms11114506	2010
Enzymology	Structural and mutational analyses of Deinococcus radiodurans UvrA2 provide insight into DNA binding and damage recognition by UvrAs.	Timmins J, Gordon E, Caria S, Leonard G, Acajjaoui S, Kuo MS, Monchois V, McSweeney S.	Structure	10.1016/j.str.2009.02.008	2009
	Evolution of pH-sensitive transcription termination in Escherichia coli during adaptation to repeated long-term starvation.	Worthan SB, McCarthy RDP, Delaleau M, Stikeleather R, Bratton BP, Boudvillain M, Behringer MG.	Proc Natl Acad Sci U S A	10.1073/pnas.2405546121	2024
	PprM, a Cold Shock Domain-Containing Protein from Deinococcus radiodurans, Confers Oxidative Stress Tolerance to Escherichia coli.	Park SH, Singh H, Appukuttan D, Jeong S, Choi YJ, Jung JH, Narumi I, Lim S.	Front Microbiol	10.3389/fmicb.2016.02124	2016
Metabolism	Synthesis of nitric oxide by the NOS-like protein from deinococcus radiodurans: a direct role for tetrahydrofolate.	Reece SY, Woodward JJ, Marletta MA.	Biochemistry	10.1021/bi900385g	2009
Enzymology	A novel serralysin metalloprotease from Deinococcus radiodurans.	Basu B, Apte SK.	Biochim Biophys Acta	10.1016/j.bbapap.2008.05.009	2008
Proteome	Ionizing Radiation-induced Proteomic Oxidation in Escherichia coli.	Bruckbauer ST, Minkoff BB, Yu D, Cryns VL, Cox MM, Sussman MR.	Mol Cell Proteomics	10.1074/mcp.ra120.002092	2020
Genetics	Small Open Reading Frame-Encoded Micro-Peptides: An Emerging Protein World.	Dong X, Zhang K, Xun C, Chu T, Liang S, Zeng Y, Liu Z.	Int J Mol Sci	10.3390/ijms241310562	2023
	Recent advances in biological, photocatalytic and adsorption applications of biosynthesized CeO₂ nanoparticles.	Lam TV, Tran GT, Nguyen NTT, Phan NK, Nguyen DTC.	Nanoscale Adv	10.1039/d5na00876j	2025
Enzymology	Characterization in vitro and in vivo of the DNA helicase encoded by Deinococcus radiodurans locus DR1572.	Cao Z, Julin DA.	DNA Repair (Amst)	10.1016/j.dnarep.2008.12.011	2009
	Near-Infrared Optogenetic Module for Conditional Protein Splicing.	Karasev MM, Verkhusha VV, Shcherbakova DM.	J Mol Biol	10.1016/j.jmb.2023.168360	2023
	Identification of PprM: a modulator of the PprI-dependent DNA damage response in Deinococcus radiodurans.	Ohba H, Satoh K, Sghaier H, Yanagisawa T, Narumi I.	Extremophiles	10.1007/s00792-009-0232-8	2009
Metabolism	High cell density production of Deinococcus radiodurans under optimized conditions.	He Y.	J Ind Microbiol Biotechnol	10.1007/s10295-008-0524-5	2009
	Experimental Evolution of Extreme Resistance to Ionizing Radiation in Escherichia coli after 50 Cycles of Selection.	Bruckbauer ST, Trimarco JD, Martin J, Bushnell B, Senn KA, Schackwitz W, Lipzen A, Blow M, Wood EA, Culberson WS, Pennacchio C, Cox MM.	J Bacteriol	10.1128/jb.00784-18	2019
	Further Characterization of the Pseudo-Symmetrical Ribosomal Region.	Rivas M, Fox GE.	Life (Basel)	10.3390/life10090201	2020
Genetics	Microbial Niche Diversification in the Galápagos Archipelago and Its Response to El Niño.	Gifford SM, Zhao L, Stemple B, DeLong K, Medeiros PM, Seim H, Marchetti A.	Front Microbiol	10.3389/fmicb.2020.575194	2020
	Irradiated whole cell Chlamydia vaccine confers significant protection in a murine genital tract challenge model.	Broder KC, Matrosova VY, Tkavc R, Gaidamakova EK, Ho LTVT, Macintyre AN, Soc A, Diallo A, Darnell SC, Bash S, Daly MJ, Jerse AE, Liechti GW.	NPJ Vaccines	10.1038/s41541-024-00968-z	2024
	Differential requirement for RecFOR pathway components in Thermus thermophilus.	Gomez-Campo CL, Abdelmoteleb A, Pulido V, Gost M, Sanchez-Hevia DL, Berenguer J, Mencia M.	Environ Microbiol Rep	10.1111/1758-2229.13269	2024
	Deinococcus radiodurans: what belongs to the survival kit?	Blasius M, Sommer S, Hubscher U.	Crit Rev Biochem Mol Biol	10.1080/10409230802122274	2008
Metabolism	Structure-based and random mutagenesis approaches increase the organophosphate-degrading activity of a phosphotriesterase homologue from Deinococcus radiodurans.	Hawwa R, Larsen SD, Ratia K, Mesecar AD.	J Mol Biol	10.1016/j.jmb.2009.06.083	2009
	Phage tRNAs evade tRNA-targeting host defenses through anticodon loop mutations.	van den Berg DF, van der Steen BA, Costa AR, Brouns SJJ.	Elife	10.7554/elife.85183	2023
Enzymology	Deinococcus radiodurans PriA is a Pseudohelicase.	Lopper ME, Boone J, Morrow C.	PLoS One	10.1371/journal.pone.0133419	2015
	Deinococcus radiodurans pprI expression enhances the radioresistance of eukaryotes.	Wen L, Yue L, Shi Y, Ren L, Chen T, Li N, Zhang S, Yang W, Yang Z.	Oncotarget	10.18632/oncotarget.8137	2016
	Structural Insight into Molecular Inhibitory Mechanism of InsP₆ on African Swine Fever Virus mRNA-Decapping Enzyme g5Rp.	Yang Y, Zhang C, Li X, Li L, Chen Y, Yang X, Zhao Y, Chen C, Wang W, Zhong Z, Yang C, Huang Z, Su D.	J Virol	10.1128/jvi.01905-21	2022
	Metabolic engineering of Thermoanaerobacterium aotearoense strain SCUT27 for biofuels production from sucrose and molasses.	Dai K, Qu C, Feng J, Lan Y, Fu H, Wang J.	Biotechnol Biofuels Bioprod	10.1186/s13068-023-02402-3	2023
Enzymology	Carotenoid 3',4'-desaturase is involved in carotenoid biosynthesis in the radioresistant bacterium Deinococcus radiodurans.	Tian B, Sun Z, Xu Z, Shen S, Wang H, Hua Y.	Microbiology (Reading)	10.1099/mic.0.2008/021071-0	2008
	Molecular dynamics simulations of the chromophore binding site of Deinococcus radiodurans bacteriophytochrome using new force field parameters for the phytochromobilin chromophore.	Kaminski S, Daminelli G, Mroginski MA.	J Phys Chem B	10.1021/jp8047532	2009
	Synthesis and extracellular accumulation of silver nanoparticles by employing radiation-resistant Deinococcus radiodurans, their characterization, and determination of bioactivity.	Kulkarni RR, Shaiwale NS, Deobagkar DN, Deobagkar DD.	Int J Nanomedicine	10.2147/ijn.s72888	2015
Metabolism	A new perspective on radiation resistance based on Deinococcus radiodurans.	Daly MJ.	Nat Rev Microbiol	10.1038/nrmicro2073	2009
Metabolism	Dr-FtsA, an actin homologue in Deinococcus radiodurans differentially affects Dr-FtsZ and Ec-FtsZ functions in vitro.	Modi K, Misra HS.	PLoS One	10.1371/journal.pone.0115918	2014
Metabolism	Structures and coordination chemistry of transporters involved in manganese and iron homeostasis.	Ray S, Gaudet R.	Biochem Soc Trans	10.1042/bst20210699	2023
Metabolism	Carotenoid biosynthesis in extremophilic Deinococcus-Thermus bacteria.	Tian B, Hua Y.	Trends Microbiol	10.1016/j.tim.2010.07.007	2010
	RecN and RecA orchestrate an ordered DNA supercompaction response following ciprofloxacin-induced DNA damage in Escherichia coli.	Vikedal K, Raeder SB, Riisnaes IMM, Bjoras M, Booth JA, Skarstad K, Helgesen E.	Nucleic Acids Res	10.1093/nar/gkaf437	2025
Metabolism	Identification of a DNA processing complex from Deinococcus radiodurans.	Kota S, Misra HS.	Biochem Cell Biol	10.1139/o08-122	2008
	RNA-DNA Differences: Mechanisms, Oxidative Stress, Transcriptional Fidelity, and Health Implications.	Stolc V, Preto O, Karhanek M, Freund F, Griko Y, Loftus DJ, Ohayon MM.	Antioxidants (Basel)	10.3390/antiox14050544	2025
Metabolism	Protein structure, amino acid composition and sequence determine proteome vulnerability to oxidation-induced damage.	Chang RL, Stanley JA, Robinson MC, Sher JW, Li Z, Chan YA, Omdahl AR, Wattiez R, Godzik A, Matallana-Surget S.	EMBO J	10.15252/embj.2020104523	2020
	Ruthenium(II) Polypyridyl Complexes and Metronidazole Derivatives: A Powerful Combination in the Design of Photoresponsive Antibacterial Agents Effective under Hypoxic Conditions.	Giacomazzo GE, Conti L, Fagorzi C, Pagliai M, Andreini C, Guerri A, Perito B, Mengoni A, Valtancoli B, Giorgi C.	Inorg Chem	10.1021/acs.inorgchem.3c00214	2023
	Mapping Protein-Protein Interactions at Birth: Single-Particle Cryo-EM Analysis of a Ribosome-Nascent Globin Complex.	Masse MM, Hutchinson RB, Morgan CE, Allaman HJ, Guan H, Yu EW, Cavagnero S.	ACS Cent Sci	10.1021/acscentsci.3c00777	2024
	A Therapeutic Uricase with Reduced Immunogenicity Risk and Improved Development Properties.	Nyborg AC, Ward C, Zacco A, Chacko B, Grinberg L, Geoghegan JC, Bean R, Wendeler M, Bartnik F, O'Connor E, Gruia F, Iyer V, Feng H, Roy V, Berge M, Miner JN, Wilson DM, Zhou D, Nicholson S, Wilker C, Wu CY, Wilson S, Jermutus L, Wu H, Owen DA, Osbourn J, Coats S, Baca M.	PLoS One	10.1371/journal.pone.0167935	2016
	Theoretical Study at the Molecular Mechanics Level of the Interaction of Tetracycline and Chloramphenicol with the Antibiotic Receptors Present in Enterococcus faecalis (Q839F7) and Streptococcus mutans (Q8DS20).	Figueroa-Banda RA, Figueroa-Castellanos KF, Chavez-Oblitas EA, Guillen-Nunez ME, Ayqui-Cueva F, Del-Carpio-M BA, Bellido-Vallejo KL, Gomez B.	Antibiotics (Basel)	10.3390/antibiotics11111640	2022
	Identification of far-red light acclimation in an endolithic Chroococcidiopsis strain and associated genomic features: Implications for oxygenic photosynthesis on exoplanets.	Billi D, Napoli A, Mosca C, Fagliarone C, de Carolis R, Balbi A, Scanu M, Selinger VM, Antonaru LA, Nurnberg DJ.	Front Microbiol	10.3389/fmicb.2022.933404	2022
Metabolism	Identification of the methyltransferase targeting C2499 in Deinococcus radiodurans 23S ribosomal RNA.	Mundus J, Flyvbjerg KF, Kirpekar F.	Extremophiles	10.1007/s00792-015-0800-z	2016
	Survival of thermophilic and hyperthermophilic microorganisms after exposure to UV-C, ionizing radiation and desiccation.	Beblo K, Douki T, Schmalz G, Rachel R, Wirth R, Huber H, Reitz G, Rettberg P.	Arch Microbiol	10.1007/s00203-011-0718-5	2011
Metabolism	DrwH, a novel WHy domain-containing hydrophobic LEA5C protein from Deinococcus radiodurans, protects enzymatic activity under oxidative stress.	Jiang S, Wang J, Liu X, Liu Y, Guo C, Zhang L, Han J, Wu X, Xue D, Gomaa AE, Feng S, Zhang H, Chen Y, Ping S, Chen M, Zhang W, Li L, Zhou Z, Zuo K, Li X, Yang Y, Lin M.	Sci Rep	10.1038/s41598-017-09541-2	2017
Metabolism	A comparative proteomic approach to better define Deinococcus nucleoid specificities.	Toueille M, Mirabella B, Guerin P, Bouthier de la Tour C, Boisnard S, Nguyen HH, Blanchard L, Servant P, de Groot A, Sommer S, Armengaud J.	J Proteomics	10.1016/j.jprot.2012.03.002	2012
Enzymology	The role of Bacillus anthracis RecD2 helicase in DNA mismatch repair.	Yang H, Yung M, Sikavi C, Miller JH.	DNA Repair (Amst)	10.1016/j.dnarep.2011.08.009	2011
	Creating Polyploid Escherichia Coli and Its Application in Efficient L-Threonine Production.	Wang S, Chen X, Jin X, Gu F, Jiang W, Qi Q, Liang Q.	Adv Sci (Weinh)	10.1002/advs.202302417	2023
	Making heads or tails of the HU proteins in the planctomycete Gemmata obscuriglobus.	Yee B, Sagulenko E, Fuerst JA.	Microbiology (Reading)	10.1099/mic.0.047605-0	2011
	Identification of 5-hydroxycytidine at position 2501 concludes characterization of modified nucleotides in E. coli 23S rRNA.	Havelund JF, Giessing AM, Hansen T, Rasmussen A, Scott LG, Kirpekar F.	J Mol Biol	10.1016/j.jmb.2011.06.036	2011
	Destruction of Raman biosignatures by ionising radiation and the implications for life detection on Mars.	Dartnell LR, Page K, Jorge-Villar SE, Wright G, Munshi T, Scowen IJ, Ward JM, Edwards HG.	Anal Bioanal Chem	10.1007/s00216-012-5829-6	2012
	[Construction of the gene drb0099 deleted mutant and adversity analysis in the extremely radioresistant bacterium Deinococcus radiodurans].	Chang S, Shu H, Lu H, Hua Y, Li Z, Tian S, Wang Y, Chen L, Tan Z, Qin G.	Wei Sheng Wu Xue Bao		2008
	Structure of the stress response protein DR1199 from Deinococcus radiodurans: a member of the DJ-1 superfamily.	Fioravanti E, Dura MA, Lascoux D, Micossi E, Franzetti B, McSweeney S.	Biochemistry	10.1021/bi800882v	2008
Biotechnology	Isolation and Characterization of Cell Envelope Fragments Comprising Archaeal S-Layer Proteins.	Pfeifer K, Ehmoser EK, Rittmann SKR, Schleper C, Pum D, Sleytr UB, Schuster B.	Nanomaterials (Basel)	10.3390/nano12142502	2022
Biotechnology	Xerotolerance: A New Property in Exiguobacterium Genus.	Lopez MC, Galan B, Carmona M, Navarro Llorens JM, Pereto J, Porcar M, Getino L, Olivera ER, Luengo JM, Castro L, Garcia JL.	Microorganisms	10.3390/microorganisms9122455	2021
	Effects of pH and NaCl on hydrolysis and transpeptidation activities of a salt-tolerant gamma-glutamyltranspeptidase from Bacillus amyloliquefaciens S0904.	Cho HB, Ahn JH, Yang HG, Lee J, Park WJ, Kim YW.	Food Sci Biotechnol	10.1007/s10068-021-00928-6	2021
Metabolism	Analysis of RNA cleavage by RNA polymerases from Escherichia coli and Deinococcus radiodurans.	Pupov DV, Barinova NA, Kulbachinskiy AV.	Biochemistry (Mosc)	10.1134/s000629790806014x	2008
Metabolism	The essential histone-like protein HU plays a major role in Deinococcus radiodurans nucleoid compaction.	Nguyen HH, de la Tour CB, Toueille M, Vannier F, Sommer S, Servant P.	Mol Microbiol	10.1111/j.1365-2958.2009.06766.x	2009
	Involvement of recQ in the ultraviolet damage repair pathway in Deinococcus radiodurans.	Hua X, Huang L, Tian B, Hua Y.	Mutat Res	10.1016/j.mrfmmm.2008.02.003	2008
	They all rock: A systematic comparison of conformational movements in LeuT-fold transporters.	Licht JA, Berry SP, Gutierrez MA, Gaudet R.	Structure	10.1016/j.str.2024.06.015	2024
Metabolism	Survival of phosphate-solubilizing bacteria against DNA damaging agents.	Shrivastava M, Rajpurohit YS, Misra HS, D'Souza SF.	Can J Microbiol	10.1139/w10-067	2010
Pathogenicity	Rational prioritization strategy allows the design of macrolide derivatives that overcome antibiotic resistance.	Konig G, Sokkar P, Pryk N, Heinrich S, Moller D, Cimicata G, Matzov D, Dietze P, Thiel W, Bashan A, Bandow JE, Zuegg J, Yonath A, Schulz F, Sanchez-Garcia E.	Proc Natl Acad Sci U S A	10.1073/pnas.2113632118	2021
Metabolism	Biochemical characterization of two DNA ligases from Deinococcus radiodurans.	Le D, Hua X, Huang L, Gao G, Lu H, Xu Z, Tian B, Hua Y.	Protein Pept Lett	10.2174/092986608784967010	2008
Metabolism	Extracellular proteome changes of Deinococcus radiodurans under gamma-irradiation stress conditions.	Ying N, Zheng Z, Xu H, Tian B, Hua Y.	Protein Pept Lett	10.2174/092986608784966985	2008
	Crystal structure of the DNA polymerase III beta subunit (beta-clamp) from the extremophile Deinococcus radiodurans.	Niiranen L, Lian K, Johnson KA, Moe E.	BMC Struct Biol	10.1186/s12900-015-0032-6	2015
	Unusual radioresistance of nitrogen-fixing cultures of Anabaena strains.	Singh H, Fernandes T, Apte SK.	J Biosci	10.1007/s12038-010-0048-9	2010
	Distinct lipid membrane interaction and uptake of differentially charged nanoplastics in bacteria.	Dai S, Ye R, Huang J, Wang B, Xie Z, Ou X, Yu N, Huang C, Hua Y, Zhou R, Tian B.	J Nanobiotechnology	10.1186/s12951-022-01321-z	2022
Metabolism	Mitosis Inhibitors Induce Massive Accumulation of Phytoene in the Microalga Dunaliella salina.	Xu Y, Harvey PJ.	Mar Drugs	10.3390/md19110595	2021
Enzymology	The kinetic mechanism of manganese-containing superoxide dismutase from Deinococcus radiodurans: a specialized enzyme for the elimination of high superoxide concentrations.	Abreu IA, Hearn A, An H, Nick HS, Silverman DN, Cabelli DE.	Biochemistry	10.1021/bi7016206	2008
Metabolism	The PHY domain is required for conformational stability and spectral integrity of the bacteriophytochrome from Deinococcus radiodurans.	Yoon JM, Hahn TR, Cho MH, Jeon JS, Bhoo SH, Kwon YK.	Biochem Biophys Res Commun	10.1016/j.bbrc.2008.03.001	2008
	Back to the roots, desiccation and radiation resistances are ancestral characters in bdelloid rotifers.	Hespeels B, Fontaneto D, Cornet V, Penninckx S, Berthe J, Bruneau L, Larrick JW, Rapport E, Bailly J, Debortoli N, Iakovenko N, Janko K, Heuskin AC, Lucas S, Hallet B, Van Doninck K.	BMC Biol	10.1186/s12915-023-01554-w	2023
Metabolism	Potential of cathodoluminescence microscopy and spectroscopy for the detection of prokaryotic cells on minerals.	Rommevaux-Jestin C, Menez B.	Astrobiology	10.1089/ast.2010.0490	2010
	On the Stability of Deinoxanthin Exposed to Mars Conditions during a Long-Term Space Mission and Implications for Biomarker Detection on Other Planets.	Leuko S, Bohmeier M, Hanke F, Boettger U, Rabbow E, Parpart A, Rettberg P, de Vera JP.	Front Microbiol	10.3389/fmicb.2017.01680	2017
Enzymology	Transposon-associated TnpB is a programmable RNA-guided DNA endonuclease.	Karvelis T, Druteika G, Bigelyte G, Budre K, Zedaveinyte R, Silanskas A, Kazlauskas D, Venclovas C, Siksnys V.	Nature	10.1038/s41586-021-04058-1	2021
	Role of RecA in DNA damage repair in Deinococcus radiodurans.	Schlesinger DJ.	FEMS Microbiol Lett	10.1111/j.1574-6968.2007.00862.x	2007
	Whole-cell vaccine candidates induce a protective response against virulent Acinetobacter baumannii.	Dollery SJ, Zurawski DV, Bushnell RV, Tobin JK, Wiggins TJ, MacLeod DA, Tasker NJPER, Alamneh YA, Abu-Taleb R, Czintos CM, Su W, Escatte MG, Meeks HN, Daly MJ, Tobin GJ.	Front Immunol	10.3389/fimmu.2022.941010	2022
Pathogenicity	Resistance of Deinococcus radiodurans to mutagenesis is facilitated by pentose phosphate pathway in the mutS1 mutant background.	Liu X, Wu J, Zhang W, Ping S, Lu W, Chen M, Lin M.	Curr Microbiol	10.1007/s00284-008-9154-4	2008
Enzymology	Deciphering Evolutionary Trajectories of Lactate Dehydrogenases Provides New Insights into Allostery.	Robin AY, Brochier-Armanet C, Bertrand Q, Barette C, Girard E, Madern D.	Mol Biol Evol	10.1093/molbev/msad223	2023
	Disruption of manganese ions [Mn(II)] transporter genes DR1709 or DR2523 in extremely radio-resistant bacterium Deinococcus radiodurans.	Chang S, Shu H, Li Z, Wang Y, Chen L, Hua Y, Qin G.	Wei Sheng Wu Xue Bao		2009
Genetics	Comparison of the genomes of deinococcal species using oligonucleotide microarrays.	Jung S, Joe M, Im S, Kim D, Lim S.	J Microbiol Biotechnol		2010
Metabolism	Knockout of crtB or crtI gene blocks the carotenoid biosynthetic pathway in Deinococcus radiodurans R1 and influences its resistance to oxidative DNA-damaging agents due to change of free radicals scavenging ability.	Zhang L, Yang Q, Luo X, Fang C, Zhang Q, Tang Y.	Arch Microbiol	10.1007/s00203-007-0262-5	2007
Transcriptome	Rotifers in space: transcriptomic response of the bdelloid rotifer Adineta vaga aboard the International Space Station.	Moris VC, Bruneau L, Berthe J, Coos R, Baselet B, Heuskin AC, Caplin N, Demets R, Krause J, Zuijderduijn L, Tortora A, Herova M, Penninckx S, Parmitano L, Tabury K, Baatout S, Van Doninck K, Hespeels B.	BMC Biol	10.1186/s12915-025-02272-1	2025
	Ring-like nucleoid does not play a key role in radioresistance of Deinococcus radiodurans.	Gao G, Lu H, Yin L, Hua Y.	Sci China C Life Sci	10.1007/s11427-007-0061-x	2007
Metabolism	Crystallization of the DdrB-DNA complex from Deinococcus radiodurans.	Sugiman-Marangos S, Junop M.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309112044041	2012
	Select Whole-Cell Biofilm-Based Immunogens Protect against a Virulent Staphylococcus Isolate in a Stringent Implant Model of Infection.	Dollery SJ, Harro JM, Wiggins TJ, Wille BP, Kim PC, Tobin JK, Bushnell RV, Tasker NJPER, MacLeod DA, Tobin GJ.	Vaccines (Basel)	10.3390/vaccines10060833	2022
Metabolism	Urate is a ligand for the transcriptional regulator PecS.	Perera IC, Grove A.	J Mol Biol	10.1016/j.jmb.2010.07.053	2010
	DrRRA: a novel response regulator essential for the extreme radioresistance of Deinococcus radiodurans.	Wang L, Xu G, Chen H, Zhao Y, Xu N, Tian B, Hua Y.	Mol Microbiol	10.1111/j.1365-2958.2008.06113.x	2008
Genetics	The dynamic nature of genomes across the tree of life.	Oliverio AM, Katz LA.	Genome Biol Evol	10.1093/gbe/evu024	2014
Metabolism	Two distinct pathways of RNA polymerase backtracking determine the requirement for the Trigger Loop during RNA hydrolysis.	Mosaei H, Zenkin N.	Nucleic Acids Res	10.1093/nar/gkab675	2021
Genetics	Environmental distribution and genomic characteristics of Solirubrobacter, with proposal of two novel species.	Jiang ZM, Mou T, Sun Y, Su J, Yu LY, Zhang YQ.	Front Microbiol	10.3389/fmicb.2023.1267771	2023
Metabolism	Biodegradation of di-n-butyl phthalate in a soil microcosm.	Liao CS.	J Environ Sci Health B	10.1080/03601231003799838	2010
Metabolism	Urate-responsive MarR homologs from Burkholderia.	Grove A.	Mol Biosyst	10.1039/c0mb00086h	2010
Pathogenicity	DdrA, DdrD, and PprA: components of UV and mitomycin C resistance in Deinococcus radiodurans R1.	Selvam K, Duncan JR, Tanaka M, Battista JR.	PLoS One	10.1371/journal.pone.0069007	2013
	Evaluation of microbial globin promoters for oxygen-limited processes using Escherichia coli.	Lara AR, Jaen KE, Sigala JC, Regestein L, Buchs J.	J Biol Eng	10.1186/s13036-017-0082-3	2017
	The room temperature crystal structure of a bacterial phytochrome determined by serial femtosecond crystallography.	Edlund P, Takala H, Claesson E, Henry L, Dods R, Lehtivuori H, Panman M, Pande K, White T, Nakane T, Berntsson O, Gustavsson E, Bath P, Modi V, Roy-Chowdhury S, Zook J, Berntsen P, Pandey S, Poudyal I, Tenboer J, Kupitz C, Barty A, Fromme P, Koralek JD, Tanaka T, Spence J, Liang M, Hunter MS, Boutet S, Nango E, Moffat K, Groenhof G, Ihalainen J, Stojkovic EA, Schmidt M, Westenhoff S.	Sci Rep	10.1038/srep35279	2016
Metabolism	RecBC enzyme overproduction affects UV and gamma radiation survival of Deinococcus radiodurans.	Khairnar NP, Kamble VA, Misra HS.	DNA Repair (Amst)	10.1016/j.dnarep.2007.07.007	2008
	Unstructured hydrophilic sequences in prokaryotic proteomes correlate with dehydration tolerance and host association.	Krisko A, Smole Z, Debret G, Nikolic N, Radman M.	J Mol Biol	10.1016/j.jmb.2010.08.012	2010
Genetics	Aging Reversal and Healthy Longevity is in Reach: Dependence on Mitochondrial DNA Heteroplasmy as a Key Molecular Target.	Stefano GB, Kream RM.	Med Sci Monit	10.12659/msm.902515	2017
Metabolism	The ClpPX protease is required for radioresistance and regulates cell division after gamma-irradiation in Deinococcus radiodurans.	Servant P, Jolivet E, Bentchikou E, Mennecier S, Bailone A, Sommer S.	Mol Microbiol	10.1111/j.1365-2958.2007.06003.x	2007
	Targeting Cancer Cell Fate: Apoptosis, Autophagy, and Gold Nanoparticles in Treatment Strategies.	Kouri MA, Tsaroucha A, Axakali TM, Varelas P, Kouloulias V, Platoni K, Efstathopoulos EP.	Curr Issues Mol Biol	10.3390/cimb47060460	2025
Pathogenicity	PprA contributes to Deinococcus radiodurans resistance to nalidixic acid, genome maintenance after DNA damage and interacts with deinococcal topoisomerases.	Kota S, Charaka VK, Ringgaard S, Waldor MK, Misra HS.	PLoS One	10.1371/journal.pone.0085288	2014
Enzymology	Phylogenetic and disruption analyses of aspartate kinase of Deinococcus radiodurans.	Nishida H, Narumi I.	Biosci Biotechnol Biochem	10.1271/bbb.60671	2007
Metabolism	Conservation of the LexA repressor binding site in Deinococcus radiodurans.	Khan F, Singh SP, Mishra BN.	J Integr Bioinform	10.2390/biecoll-jib-2008-86	2008
	Whole cell imprinting in sol-gel thin films for bacterial recognition in liquids: macromolecular fingerprinting.	Cohen T, Starosvetsky J, Cheruti U, Armon R.	Int J Mol Sci	10.3390/ijms11041236	2010
Metabolism	A new subfamily of polyphosphate kinase 2 (class III PPK2) catalyzes both nucleoside monophosphate phosphorylation and nucleoside diphosphate phosphorylation.	Motomura K, Hirota R, Okada M, Ikeda T, Ishida T, Kuroda A.	Appl Environ Microbiol	10.1128/aem.03971-13	2014
Metabolism	Characterization of the Radiation Desiccation Response Regulon of the Radioresistant Bacterium Deinococcus radiodurans by Integrative Genomic Analyses.	Eugenie N, Zivanovic Y, Lelandais G, Coste G, Bouthier de la Tour C, Bentchikou E, Servant P, Confalonieri F	Cells	10.3390/cells10102536	2021
Metabolism	Effects of carotenoids from Deinococcus radiodurans on protein oxidation.	Tian B, Sun Z, Shen S, Wang H, Jiao J, Wang L, Hu Y, Hua Y	Lett Appl Microbiol	10.1111/j.1472-765X.2009.02727.x	2009
Genetics	Mismatch repair ensures fidelity of replication and recombination in the radioresistant organism Deinococcus radiodurans.	Mennecier S, Coste G, Servant P, Bailone A, Sommer S	Mol Genet Genomics	10.1007/s00438-004-1077-6	2004
Metabolism	Protein splicing of the Deinococcus radiodurans strain R1 Snf2 intein.	Southworth MW, Perler FB	J Bacteriol	10.1128/JB.184.22.6387-6388.2002	2002
Metabolism	Firm but slippery attachment of Deinococcus geothermalis.	Kolari M, Schmidt U, Kuismanen E, Salkinoja-Salonen MS	J Bacteriol	10.1128/JB.184.9.2473-2480.2002	2002
Pathogenicity	Culturomics of Bacteria from Radon-Saturated Water of the World's Oldest Radium Mine.	Kapinusova G, Jani K, Smrhova T, Pajer P, Jarosova I, Suman J, Strejcek M, Uhlik O	Microbiol Spectr	10.1128/spectrum.01995-22	2022
	Deinococcus taeanensis sp. nov., a Radiation-Resistant Bacterium Isolated from a Coastal Dune.	Lee JH, Jung JH, Kim MK, Lim S.	Curr Microbiol	10.1007/s00284-022-03044-8	2022
Phylogeny	Pontibacter rufus sp. nov., Pontibacter humidus sp. nov. and Pontibacter coccineus sp. nov. isolated from UV-irradiated soil in Korea.	Park S, Lee HB, Srinivasan S, Kim MK.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006755	2025
Genetics	Genomic Functional Analysis of Novel Radiation-Resistant Species of Knollia sp. nov. S7-12^T from the North Slope of Mount Everest.	Wang X, Liu Y, Chen Z, Wang K, Liu G, Chen T, Zhang B.	Microorganisms	10.3390/microorganisms12091748	2024
	Coccomyxa actinabiotis sp. nov. (Trebouxiophyceae, Chlorophyta), a new green microalga living in the spent fuel cooling pool of a nuclear reactor	Rivasseau C, Farhi E, Compagnon E, de Gouvion Saint Cyr D, van Lis R, Falconet D, Kuntz M, Atteia A, Coute A.	Journal of Phycology.		2016
Phylogeny	Coccomyxa actinabiotis sp. nov. (Trebouxiophyceae, Chlorophyta), a new green microalga living in the spent fuel cooling pool of a nuclear reactor.	Rivasseau C, Farhi E, Compagnon E, de Gouvion Saint Cyr D, van Lis R, Falconet D, Kuntz M, Atteia A, Coute A.	J Phycol	10.1111/jpy.12442	2016
Phylogeny	Deinococcus radioresistens sp. nov., a UV and gamma radiation-resistant bacterium isolated from mountain soil.	Srinivasan S, Lee JJ, Lim SY, Joe MH, Im SH, Kim MK.	Antonie Van Leeuwenhoek	10.1007/s10482-014-0350-x	2015
Phylogeny	Deinococcus antarcticus sp. nov., isolated from soil.	Dong N, Li HR, Yuan M, Zhang XH, Yu Y	Int J Syst Evol Microbiol	10.1099/ijs.0.066324-0	2014
Phylogeny	Deinococcus wulumuqiensis sp. nov., and Deinococcus xibeiensis sp. nov., isolated from radiation-polluted soil.	Wang W, Mao J, Zhang Z, Tang Q, Xie Y, Zhu J, Zhang L, Liu Z, Shi Y, Goodfellow M	Int J Syst Evol Microbiol	10.1099/ijs.0.015917-0	2009

References

#8768	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20539
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#37966	; Curators of the CIP;
#48649	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 27074
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66793	Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#122123	Collection of Institut Pasteur ; Curators of the CIP; CIP 104750
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Deinococcus radiodurans (CCUG 27074, DSM 20539, ATCC 13939)

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