Name: Deinococcus grandis KS 0460
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 3848

Type strain:

Species: Deinococcus grandis

Strain Designation: KS 0460

Culture col. no.: DSM 3964, IAM 13006, JCM 6270, CCM 3998

Strain history: H. Oyaizu KS 0460.

NCBI tax ID(s): 57498 (species)

SI-ID 45156

ATCC 43673, IAM 13006, JCM 6270, DSM 3964, CCM 3998

Other strains from Deinococcus grandis

D. grandis KS 0485, DSM 3963, ATCC 43672, ... (type strain)
D. grandis KS 0488, DSM 3965, IAM 13007, JCM ...
D. grandis KS 0492, DSM 3966, IAM 13008, JCM ...

Section

Deinococcus grandis KS 0460 is a mesophilic bacterium that was isolated from faeces of Elephas maximus.

mesophilic
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Deinococcota*
	Class	*Deinococci*
	Order	*Deinococcales*
	Family	*Deinococcaceae*
	Genus	*Deinococcus*
	Species	**Deinococcus grandis**
	Full Scientific Name (LPSN)	Deinococcus grandis (Oyaizu et al. 1987) Rainey et al. 1997

Synonym

Deinobacter grandis

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1533]

Culture medium

PYEA MEDIUM (DSMZ Medium 364)

[Ref.: #1533]

Culture medium growth

[Ref.: #1533]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1533]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1533]			growth	26 °C
[Ref.: #67770]			growth	30 °C

[Ref.: #1533]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1533]	Murein short key	A21.01
[Ref.: #1533]	Murein types	A3ß L-Orn-Gly₂_-₃

[Ref.: #67770]

Observation

quinones: MK-8

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1533]	Sample type/isolated from	faeces of Elephas maximus
[Ref.: #1533]	Host species	Elephas maximus

[Ref.: #67770]	Sample type/isolated from	Feces of Elephas maximus
[Ref.: #67770]	Host species	Elephas maximus
* marker position based on {}

Isolation sources categories

#Host	#Mammals	-
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1533]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

[Ref.: #1533]

GC-content

69.2 mol%

Availability in culture collections External links

[Ref.: #1533]

Culture collection no.

DSM 3964, IAM 13006, JCM 6270, CCM 3998

[Ref.: #73358]

SI-ID 45156

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	High-quality genome sequence of the radioresistant bacterium Deinococcus ficus KS 0460.	Matrosova VY, Gaidamakova EK, Makarova KS, Grichenko O, Klimenkova P, Volpe RP, Tkavc R, Ertem G, Conze IH, Brambilla E, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy T, Daum C, Shapiro N, Ivanova N, Kyrpides N, Woyke T, Daligault H, Davenport K, Erkkila T, Goodwin LA, Gu W, Munk C, Teshima H, Xu Y, Chain P, Woolbert M, Gunde-Cimerman N, Wolf YI, Grebenc T, Gostincar C, Daly MJ	Stand Genomic Sci	10.1186/s40793-017-0258-y	2017	*

References

#1533

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 3964

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#73358

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID45156.1 )

* These data were automatically processed and therefore are not curated

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