Saccharicrinis fermentans (DSM 9555, ATCC 19072, IAM 14302)

Name: Saccharicrinis fermentans (DSM 9555, ATCC 19072, IAM 14302)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 3773

Type strain

Culture col. no. DSM 9555 ATCC 19072 IAM 14302 NCIMB 2218 NBRC 15936 5 more

NCBI tax ID(s) 982

Special Collections DSMZ JCM CIP

History <- ATCC <- H. Veldkamp IAM 14302 <-- NCIMB 2218 <-- ATCC 19072 <-- H. Veldkamp. CIP <- 2001, IFO <- IAM <- NCIMB <- ATCC <- H. Veldkamp

Links

Saccharicrinis fermentans DSM 9555 is a facultative anaerobe, Gram-negative, rod-shaped bacterium that was isolated from marine mud.

Gram-negative rod-shaped facultative anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 2146

LMG 1338,ATCC 19072,NCMB 2218,CIP 104805,IAM 14302,IFO 15936,NCIMB 2218,DSM 9555,KCTC 2901,NBRC 15936,JCM 21142,CECT 7602

@ref 20215

Last LPSN update 2026-02-09 11:18:34

Domain Bacteria

Phylum Bacteroidota

Class Bacteroidia

Order Bacteroidales

Family Marinilabiliaceae

Genus Saccharicrinis

Species Saccharicrinis fermentans

Full scientific name Saccharicrinis fermentans (Bachmann 1955) Yang et al. 2014

Synonyms (1)

Cytophaga fermentans

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
119310	negative	rod-shaped
125439	negative			99.5

Multimedia

@ref:	66793
multimedia content:	EM_DSM_9555_1.jpg
multimedia.multimedia content:	EM_DSM_9555_1.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
3636	CYTOPHAGA MEDIUM (DSMZ Medium 669)	Medium recipe at MediaDive	Name: CYTOPHAGA MEDIUM (DSMZ Medium 669) Composition: NaCl 20.0 g/l Yeast extract 10.0 g/l Agar 3.0 g/l MgSO4 x 7 H2O 1.0 g/l NH4Cl 1.0 g/l K2HPO4 0.2 g/l FeCl3 0.001 g/l Tap water
35746	MEDIUM 166 - for Cytophaga fermentans		Agar (15.000 g);Yeast extract (1.000 g);Casitone (9.000 g);Syntheticsea solution - M0216 (1000.000 ml)
119310	CIP Medium 166	Medium recipe at CIP
119310	CIP Medium 213	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
3636	positive	growth	30
35746	positive	growth	30
67770	positive	growth	30
119310	positive	growth	25-37
119310	negative	growth	5
119310	negative	growth	15
119310	negative	growth	41
119310	negative	growth	45

Physiology and metabolism

Oxygen tolerance

119310

Oxygen tolerancefacultative anaerobe

Spore formation

@ref	Spore formation	Confidence
125439		92

Halophily

@ref	Salt	Growth	Tested relation	Concentration
119310	NaCl	positive	growth	4 %
119310	NaCl		growth	0 %
119310	NaCl		growth	2 %
119310	NaCl		growth	6 %
119310	NaCl		growth	8 %
119310	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
119310	4853 ChEBI	esculin	-	hydrolysis
119310	606565 ChEBI	hippurate	-	hydrolysis
119310	17632 ChEBI	nitrate	-	builds gas from
119310	17632 ChEBI	nitrate	-	reduction
119310	17632 ChEBI	nitrate	+	respiration
119310	16301 ChEBI	nitrite	-	builds gas from
119310	16301 ChEBI	nitrite	-	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
119310	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
119310	15688 ChEBI	acetoin	-
119310	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
119310	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	+	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
119310	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
119310	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
119310	gamma-glutamyltransferase	-	2.3.2.2
119310	gelatinase	-
68382	leucine arylamidase	-	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
119310	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
119310	ornithine decarboxylase	-	4.1.1.17
119310	oxidase	-
119310	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	-	3.4.21.4	from API zym
119310	tryptophan deaminase	-
119310	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119310	-	+	+	+	-	-	-	-	-	-	+	+	-	+	-	-	-	-	+	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
119310	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Terrestrial	#Mud (Sludge)
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type
3636	marine mud
67770	Marine mud
119310	Environment, Marine mud

Taxonmaps

69479

Global distribution of 16S sequence AB517712 (>99% sequence identity) for Saccharicrinis fermentans subclade from Microbeatlas

Aquatic Samples	1715
Soil Samples	121
Animal Samples	641
Plant Samples	28
Total Samples	2505

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
3636	1	Risk group (German classification) According to TRBA 466
119310	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM51708v1 assembly for Saccharicrinis fermentans DSM 9555 = JCM 21142	scaffold	GCA_000517085	869213.4	2509601038	869213	74.42
67770	ASM58367v1 assembly for Saccharicrinis fermentans DSM 9555 = JCM 21142	contig	GCA_000583675	1236536.3	2576861787	869213	11.35

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Cytophaga fermentans gene for 16S ribosomal RNA, partial sequence, strain: NBRC 15936	AB517712	1448	982
20218	Cytophaga fermentans gene for 16S ribosomal RNA, partial sequence	D12661	1257	869213
3636	Cytophaga fermentans strain ATCC 19072 16S ribosomal RNA gene, partial sequence	M58766	1474	982

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Saccharicrinis fermentans DSM 9555 = JCM 21142
NCBI: GCA_000517085

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	75.90	no
125439	gram_stain	BacteriaNetⓘ	negative	99.50	no
125439	motility	BacteriaNetⓘ	no	51.20	no
125439	spore_formation	BacteriaNetⓘ	no	92.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Cytophaga fermentans DSM 9555
PATRIC: 869213.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	83.98	no
125438	anaerobic	anaerobicⓘ	no	79.47	yes
125438	aerobic	aerobicⓘ	no	70.27	yes
125438	spore-forming	spore-formingⓘ	no	87.15	no
125438	thermophilic	thermophileⓘ	no	90.08	yes
125438	flagellated	motile2+ⓘ	no	82.99	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Biotechnology	Biocatalytic Conversion of Carrageenans for the Production of 3,6-Anhydro-D-galactose.	Fuchs A, Romeis D, Hupfeld E, Sieber V.	J Agric Food Chem	10.1021/acs.jafc.3c08613	2024
	Bioprotective and Functional Activities of Postbiotics From Lactic Acid Bacteria Derived From Artisanal Dairy Products.	Tariq A, Tahran MN, Ozturkoglu-Budak S.	Food Sci Nutr	10.1002/fsn3.70647	2025
	Dissecting the HGT network of carbon metabolic genes in soil-borne microbiota.	Li L, Liu Y, Xiao Q, Xiao Z, Meng D, Yang Z, Deng W, Yin H, Liu Z.	Front Microbiol	10.3389/fmicb.2023.1173748	2023
	A Novel Carrageenan Metabolic Pathway in Flavobacterium algicola.	Jiang C, Zhang T, Li Q, Jiang H, Mao X.	Appl Environ Microbiol	10.1128/aem.01100-22	2022
Enzymology	Characterization of a novel D-sorbitol dehydrogenase from Faunimonas pinastri A52C2.	Yu S, Li Y, Shi G, Xu S, Zhang L, Ding Z.	Appl Microbiol Biotechnol	10.1007/s00253-024-13381-2	2025
Proteome	The use of omics technologies in creating LBP and postbiotics based on the Limosilactobacillus fermentum U-21.	Odorskaya MV, Mavletova DA, Nesterov AA, Tikhonova OV, Soloveva NA, Reznikova DA, Galanova OO, Vatlin AA, Slynko NM, Vasilieva AR, Peltek SE, Danilenko VN.	Front Microbiol	10.3389/fmicb.2024.1416688	2024
Metabolism	Distribution and evolution of nitrogen fixation genes in the phylum Bacteroidetes.	Inoue J, Oshima K, Suda W, Sakamoto M, Iino T, Noda S, Hongoh Y, Hattori M, Ohkuma M.	Microbes Environ	10.1264/jsme2.me14142	2015
Enzymology	Purification and properties of two different dihydroxyacetone reductases in Gluconobacter suboxydans grown on glycerol.	Adachi O, Ano Y, Shinagawa E, Matsushita K.	Biosci Biotechnol Biochem	10.1271/bbb.80199	2008
Enzymology	Purification and properties of membrane-bound D-sorbitol dehydrogenase from Gluconobacter suboxydans IFO 3255.	Sugisawa T, Hoshino T.	Biosci Biotechnol Biochem	10.1271/bbb.66.57	2002
Enzymology	Main polyol dehydrogenase of Gluconobacter suboxydans IFO 3255, membrane-bound D-sorbitol dehydrogenase, that needs product of upstream gene, sldB, for activity.	Shinjoh M, Tomiyama N, Miyazaki T, Hoshino T.	Biosci Biotechnol Biochem	10.1271/bbb.66.2314	2002
Enzymology	Purification and characterization of membrane-bound quinoprotein quinate dehydrogenase.	Adachi O, Yoshihara N, Tanasupawat S, Toyama H, Matsushita K.	Biosci Biotechnol Biochem	10.1271/bbb.67.2115	2003
Metabolism	Molecular cloning and functional expression of D-sorbitol dehydrogenase from Gluconobacter suboxydans IF03255, which requires pyrroloquinoline quinone and hydrophobic protein SldB for activity development in E. coli.	Miyazaki T, Tomiyama N, Shinjoh M, Hoshino T.	Biosci Biotechnol Biochem	10.1271/bbb.66.262	2002
Metabolism	Membrane-bound D-sorbitol dehydrogenase of Gluconobacter suboxydans IFO 3255--enzymatic and genetic characterization.	Hoshino T, Sugisawa T, Shinjoh M, Tomiyama N, Miyazaki T.	Biochim Biophys Acta	10.1016/s1570-9639(03)00071-2	2003
	Production of L-erythrose via L-erythrulose from erythritol using microbial and enzymatic reactions.	Mizanur RM, Takeshita K, Moshino H, Takada G, Izumori K.	J Biosci Bioeng	10.1263/jbb.92.237	2001
Phylogeny	Isolation and characterization of MELt gene from Torulaspora delbrueckii IFO 1255.	Oda Y, Fukunaga M.	Yeast	10.1002/(sici)1097-0061(199912)15:16<1797::aid-yea498>3.0.co;2-g	1999
	Purification and molecular characterization of a quinoprotein alcohol dehydrogenase from Pseudogluconobacter saccharoketogenes IFO 14464.	Shibata T, Ishii Y, Noguchi Y, Yamada H, Saito Y, Yamashita M.	J Biosci Bioeng	10.1263/jbb.92.524	2001
Enzymology	Crystallization and Properties of NADPH-Dependent L-Sorbose Reductase from Gluconobacter melanogenus IFO 3294.	Adachi O, Ano Y, Moonmangmee D, Shinagawa E, Toyama H, Theeragool G, Lotong N, Matsushita K.	Biosci Biotechnol Biochem	10.1271/bbb.63.2137	1999
Enzymology	Purification of a marine bacterial glucose dehydrogenase from Cytophaga marinoflava and its application for measurement of 1,5-anhydro-D-glucitol.	Tsugawa W, Horiuchi S, Tanaka M, Wake H, Sode K.	Appl Biochem Biotechnol	10.1007/bf02786960	1996
Metabolism	Novel family of carbohydrate-binding modules revealed by the genome sequence of Spirochaeta thermophila DSM 6192.	Angelov A, Loderer C, Pompei S, Liebl W.	Appl Environ Microbiol	10.1128/aem.00523-11	2011
	The structure of the O-specific polysaccharide from Thiobacillus ferrooxidans IFO 14262.	Vinogradov EV, Campos-Portuguez S, Yokota A, Mayer H.	Carbohydr Res	10.1016/0008-6215(94)80009-x	1994
	Synthesis and antimicrobial activity of sperabillin derivatives.	Hida T, Tsubotani S, Katayama N, Funabashi Y, Natsugari H, Harada S.	J Antibiot (Tokyo)	10.7164/antibiotics.46.803	1993
Enzymology	Crystal structure of quinone-dependent alcohol dehydrogenase from Pseudogluconobacter saccharoketogenes. A versatile dehydrogenase oxidizing alcohols and carbohydrates.	Rozeboom HJ, Yu S, Mikkelsen R, Nikolaev I, Mulder HJ, Dijkstra BW.	Protein Sci	10.1002/pro.2818	2015
Metabolism	NADPH-dependent L-sorbose reductase is responsible for L-sorbose assimilation in Gluconobacter suboxydans IFO 3291.	Shinjoh M, Tazoe M, Hoshino T.	J Bacteriol	10.1128/jb.184.3.861-863.2002	2002
Metabolism	Biosynthesis of l-Sorbose and l-Psicose Based on C-C Bond Formation Catalyzed by Aldolases in an Engineered Corynebacterium glutamicum Strain.	Yang J, Li J, Men Y, Zhu Y, Zhang Y, Sun Y, Ma Y.	Appl Environ Microbiol	10.1128/aem.00208-15	2015
Metabolism	Characterization of a novel LysM domain from Lactobacillus fermentum bacteriophage endolysin and its use as an anchor to display heterologous proteins on the surfaces of lactic acid bacteria.	Hu S, Kong J, Kong W, Guo T, Ji M.	Appl Environ Microbiol	10.1128/aem.01752-09	2010
Metabolism	L-sorbose reductase and its transcriptional regulator involved in L-sorbose utilization of Gluconobacter frateurii.	Soemphol W, Toyama H, Moonmangmee D, Adachi O, Matsushita K.	J Bacteriol	10.1128/jb.01895-06	2007
	One-Step Microbial Conversion of a Racemic Mixture of Pantoyl Lactone to Optically Active d-(-)-Pantoyl Lactone.	Shimizu S, Hattori S, Hata H, Yamada H.	Appl Environ Microbiol	10.1128/aem.53.3.519-522.1987	1987
Pathogenicity	Screening for microtubule-disrupting antifungal agents by using a mitotic-arrest mutant of Aspergillus nidulans and novel action of phenylalanine derivatives accompanying tubulin loss.	Kiso T, Fujita K, Ping X, Tanaka T, Taniguchi M.	Antimicrob Agents Chemother	10.1128/aac.48.5.1739-1748.2004	2004
Phylogeny	New degenerate Cytophaga-Flexibacter-Bacteroides-specific 16S ribosomal DNA-targeted oligonucleotide probes reveal high bacterial diversity in River Taff epilithon.	O'Sullivan LA, Weightman AJ, Fry JC.	Appl Environ Microbiol	10.1128/aem.68.1.201-210.2002	2002
Genetics	Draft Genome Sequence of Cytophaga fermentans JCM 21142T, a Facultative Anaerobe Isolated from Marine Mud.	Starns D, Oshima K, Suda W, Iino T, Yuki M, Inoue J, Kitamura K, Iida T, Darby A, Hattori M, Ohkuma M	Genome Announc	10.1128/genomeA.00206-14	2014
Enzymology	Glycomyces phytohabitans sp. nov., a novel endophytic actinomycete isolated from the coastal halophyte in Jiangsu, East China.	Xing K, Qin S, Zhang WD, Cao CL, Ruan JS, Huang Y, Jiang JH.	J Antibiot (Tokyo)	10.1038/ja.2014.40	2014
Phylogeny	Endobacter medicaginis gen. nov., sp. nov., isolated from alfalfa nodules in an acidic soil.	Ramirez-Bahena MH, Tejedor C, Martin I, Velazquez E, Peix A.	Int J Syst Evol Microbiol	10.1099/ijs.0.041368-0	2013
Phylogeny	Microbacterium kribbense sp. nov., isolated from soil.	Dastager SG, Lee JC, Ju YJ, Park DJ, Kim CJ.	Int J Syst Evol Microbiol	10.1099/ijs.0.2008/001222-0	2008
Phylogeny	Microbacterium ginsengisoli sp. nov., a beta-glucosidase-producing bacterium isolated from soil of a ginseng field.	Park MJ, Kim MK, Kim HB, Im WT, Yi TH, Kim SY, Soung NK, Yang DC.	Int J Syst Evol Microbiol	10.1099/ijs.0.65226-0	2008
Phylogeny	Saccharicrinis marinus sp. nov., isolated from marine sediment.	Liu QQ, Li J, Xiao D, Lu JX, Chen GJ, Du ZJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.000436	2015
Phylogeny	Saccharicrinis carchari sp. nov., isolated from a shark, and emended descriptions of the genus Saccharicrinis and Saccharicrinis fermentans.	Liu QQ, Wang Y, Li J, Du ZJ, Chen GJ	Int J Syst Evol Microbiol	10.1099/ijs.0.061986-0	2014
Phylogeny	Carboxylicivirga gen. nov. in the family Marinilabiliaceae with two novel species, Carboxylicivirga mesophila sp. nov. and Carboxylicivirga taeanensis sp. nov., and reclassification of Cytophaga fermentans as Saccharicrinis fermentans gen. nov., comb. nov.	Yang SH, Seo HS, Woo JH, Oh HM, Jang H, Lee JH, Kim SJ, Kwon KK	Int J Syst Evol Microbiol	10.1099/ijs.0.053462-0	2014
Phylogeny	Marinifilum fragile gen. nov., sp. nov., isolated from tidal flat sediment.	Na H, Kim S, Moon EY, Chun J	Int J Syst Evol Microbiol	10.1099/ijs.0.009027-0	2009

References

#3636	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 9555
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#35746	; Curators of the CIP;
#66793	Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#119310	Collection of Institut Pasteur ; Curators of the CIP; CIP 104805
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Saccharicrinis fermentans (DSM 9555, ATCC 19072, IAM 14302)

Name and taxonomic classification

Morphology

Cell morphology

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Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Metabolite production

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API biotype100

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Genome sequences

Genome browser: GCA_000517085

16S sequences

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