Name: Anaeromyxobacter dehalogenans 2CP-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 3755

Type strain:

Species: Anaeromyxobacter dehalogenans

Strain Designation: 2CP-1

Culture col. no.: DSM 21875, ATCC BAA-258

Strain history: <- S. H. Thomas, Georgia Institute of Technology, School of Civil and Environmental Engineering, Atlanta <- R. A. Sanford, Department of Civil Environmental Engineering, University of Illinois <- J. R. Cole, Center for Microbial Ecol. , Michigan State Univ., USA

NCBI tax ID(s): 161493 (species)

SI-ID 87742

ATCC BAA-258, DSM 21875

Other strains from Anaeromyxobacter dehalogenans

A. dehalogenans K, DSM 21876
A. dehalogenans 2CP-C, DSM 21877, ATCC BAA-259
A. dehalogenans FRC-W, DSM 21878
A. dehalogenans FRC-R5, DSM 22858
A. dehalogenans R, DSM 22859
A. dehalogenans FRC-D1, DSM 22860
A. dehalogenans FRC-D3, DSM 22861
A. dehalogenans FRC-R8, DSM 22862

Section

Anaeromyxobacter dehalogenans 2CP-1 is an anaerobe, mesophilic bacterium that was isolated from stream sediment near Lansing, Michigan.

anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Myxococcales*
	Family	*Anaeromyxobacteraceae*
	Genus	*Anaeromyxobacter*
	Species	**Anaeromyxobacter dehalogenans**
	Full Scientific Name (LPSN)	Anaeromyxobacter dehalogenans Sanford et al. 2002

Information on morphological and physiological properties Morphology

[Ref.: #16008]

Incubation period

>14 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16008]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #16008]

Culture medium growth

[Ref.: #16008]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16008]

Culture medium composition

expand / minimize

[Ref.: #16008]

Culture medium

ANAEROMYXOBACTER-MEDIUM (DSMZ Medium 1200)

[Ref.: #16008]

Culture medium growth

[Ref.: #16008]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16008]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #16008]			growth	28 °C

[Ref.: #16008]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #16008]	Oxygen tolerance	anaerobe
[Ref.: #16008]	Oxygen tolerance	microaerophile

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16008]	Sample type/isolated from	stream sediment near Lansing, Michigan
[Ref.: #16008]	Geographic location (country and/or sea, region)	Lansing, Michigan
[Ref.: #16008]	Country	USA
[Ref.: #16008]	Country ISO 3 Code	USA
[Ref.: #16008]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF382396 (>99% sequence identity) for Anaeromyxobacter from Microbeatlas

Aquatic Samples	2438
Soil Samples	6429
Animal Samples	420
Plant Samples	937
Total Samples	10224

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16008]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16008]	Anaeromyxobacter dehalogenans strain 2CP-1 16S ribosomal RNA gene, partial sequence	AF382396	1549	ENA	455488 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Anaeromyxobacter dehalogenans 2CP-1 2CP1	GCA_000022145	complete	GenBank	455488 tax ID	*
[Ref.: #66792]	Anaeromyxobacter dehalogenans 2CP-1	455488.5	complete	PATRIC	455488 tax ID	*
[Ref.: #66792]	Anaeromyxobacter dehalogenans 2CP-1	643348507	complete	JGI IMG/M	455488 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Anaeromyxobacter dehalogenans 2CP-1 2CP-1 NCBI: GCA_000022145.1
[Ref.: #69480]	motile	yes	81.192	no
[Ref.: #69480]	flagellated	no	79.294	no
[Ref.: #69480]	gram-positive	no	98.37	no
[Ref.: #69480]	anaerobic	no	72.15	no
[Ref.: #69480]	aerobic	no	83.018	yes
[Ref.: #69480]	halophile	no	92.488	no
[Ref.: #69480]	spore-forming	no	89.384	no
[Ref.: #69480]	glucose-util	yes	51.289	no
[Ref.: #69480]	thermophile	no	87.262	yes
[Ref.: #69480]	glucose-ferment	no	92.444	no

Availability in culture collections External links

[Ref.: #16008]

Culture collection no.

DSM 21875, ATCC BAA-258

[Ref.: #73267]

SI-ID 87742

Literature:

	Title	Authors	Journal	DOI	Year
Phylogeny	Release of arsenic from soil by a novel dissimilatory arsenate-reducing bacterium, Anaeromyxobacter sp. strain PSR-1.	Kudo K, Yamaguchi N, Makino T, Ohtsuka T, Kimura K, Dong DT, Amachi S	Appl Environ Microbiol	10.1128/AEM.00693-13	2013	*
Phylogeny	Characterization and description of Anaeromyxobacter dehalogenans gen. nov., sp. nov., an aryl-halorespiring facultative anaerobic myxobacterium.	Sanford RA, Cole JR, Tiedje JM	Appl Environ Microbiol	10.1128/AEM.68.2.893-900.2002	2002	*
Phylogeny	Anaeromyxobacter oryzae sp. nov., Anaeromyxobacter diazotrophicus sp. nov. and Anaeromyxobacter paludicola sp. nov., isolated from paddy soils.	Itoh H, Xu Z, Mise K, Masuda Y, Ushijima N, Hayakawa C, Shiratori Y, Senoo K	Int J Syst Evol Microbiol	10.1099/ijsem.0.005546	2022	*
	Genomic analyses of bacterial porin-cytochrome gene clusters.	Shi L, Fredrickson JK, Zachara JM	Front Microbiol	10.3389/fmicb.2014.00657	2014	*
	Strain FAc12, a dissimilatory iron-reducing member of the Anaeromyxobacter subgroup of Myxococcales.	Treude N, Rosencrantz D, Liesack W, Schnell S	FEMS Microbiol Ecol	10.1016/S0168-6496(03)00048-5	2003	*

References

#16008

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21875

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#73267

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID87742.1 )

* These data were automatically processed and therefore are not curated

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Anaeromyxobacter dehalogenans 2CP-1 2CP-1

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