Anaeromyxobacter dehalogenans (DSM 21875, ATCC BAA-258, 2CP-1)

Name: Anaeromyxobacter dehalogenans (DSM 21875, ATCC BAA-258, 2CP-1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 3755

Type strain

Strain Designation 2CP-1

Culture col. no. DSM 21875 ATCC BAA-258 2CP-1

NCBI tax ID(s) 455488 161493

Special Collections DSMZ

History DSMZ <- S. H. Thomas, Georgia Institute of Technology, School of Civil and Environmental Engineering, Atlanta <- R. A. Sanford, Department of Civil Environmental Engineering, University of Illinois <- J. R. Cole, Center for Microbial Ecol. , Michigan State Univ., USA

Links

Anaeromyxobacter dehalogenans 2CP-1 is an anaerobe bacterium that was isolated from stream sediment near Lansing, Michigan.

anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 87742

ATCC BAA-258,DSM 21875

@ref 20215

Last LPSN update 2026-05-29 08:25:47

Domain Bacteria

Phylum Pseudomonadota

Class Deltaproteobacteria

Order Myxococcales

Family Anaeromyxobacteraceae

Genus Anaeromyxobacter

Species Anaeromyxobacter dehalogenans

Full scientific name Anaeromyxobacter dehalogenans Sanford et al. 2002

BacDive ID	Other strains from **Anaeromyxobacter dehalogenans** (8)	Type strain
3756	A. dehalogenans K, DSM 21876
3757	A. dehalogenans 2CP-C, DSM 21877, ATCC BAA-259
3758	A. dehalogenans FRC-W, DSM 21878
3759	A. dehalogenans FRC-R5, DSM 22858
3760	A. dehalogenans R, DSM 22859
3761	A. dehalogenans FRC-D1, DSM 22860
3762	A. dehalogenans FRC-D3, DSM 22861
3763	A. dehalogenans FRC-R8, DSM 22862

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	92.494

Colony morphology

16008

Incubation period>14 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
16008	R2A MEDIUM (DSMZ Medium 830)		Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
16008	ANAEROMYXOBACTER-MEDIUM (DSMZ Medium 1200)		Medium recipe at MediaDive	Name: ANAEROMYXOBACTER-MEDIUM (DSMZ Medium 1200) Composition: NaHCO3 4.54545 g/l NaCl 1.00563 g/l MgCl2 x 6 H2O 0.502815 g/l Na-acetate 0.402253 g/l Disodium fumarate 0.363636 g/l NH4Cl 0.301689 g/l KCl 0.301689 g/l KH2PO4 0.201126 g/l DL-Dithiothreitol 0.14 g/l CaCl2 x 2 H2O 0.0150845 g/l Na2S x H2O 0.0145455 g/l L-Cysteine 0.0136364 g/l HCl 0.00193584 g/l FeSO4 x 7 H2O 0.00149648 g/l NaOH 0.00100563 g/l H3BO3 0.000299295 g/l CoCl2 x 6 H2O 0.000189553 g/l Pyridoxine hydrochloride 0.000181818 g/l MnCl2 x 4 H2O 9.97651e-05 g/l Nicotinic acid 9.09091e-05 g/l D-Calcium pantothenate 9.09091e-05 g/l p-Aminobenzoic acid 9.09091e-05 g/l Lipoic acid 9.09091e-05 g/l Thiamine-HCl x 2 H2O 9.09091e-05 g/l Riboflavin 9.09091e-05 g/l ZnCl2 6.98355e-05 g/l Biotin 3.63636e-05 g/l Folic acid 3.63636e-05 g/l Na2MoO4 x 2 H2O 3.59154e-05 g/l NiCl2 x 6 H2O 2.39436e-05 g/l Na2WO4 x 2 H2O 8.04505e-06 g/l Na2SeO3 x 5 H2O 6.03379e-06 g/l CuCl2 x 2 H2O 1.9953e-06 g/l Vitamin B12 1.81818e-06 g/l Resazurin Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
16008	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
16008	anaerobe
16008	microaerophile
125439	obligate aerobe	99.37

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
16008	stream sediment near Lansing, Michigan	Lansing, Michigan	USA	USA	North America

Taxonmaps

69479

Global distribution of 16S sequence AF382396 (>99% sequence identity) for Anaeromyxobacter from Microbeatlas

Aquatic Samples	2438
Soil Samples	6429
Animal Samples	420
Plant Samples	937
Total Samples	10224

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
16008	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2214v1 assembly for Anaeromyxobacter dehalogenans 2CP-1	complete	GCA_000022145	455488.5	643348507	455488	96.71

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
16008	Anaeromyxobacter dehalogenans strain 2CP-1 16S ribosomal RNA gene, partial sequence	AF382396	1549		455488

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM2214v1 assembly for Anaeromyxobacter dehalogenans 2CP-1
BV-BRC: 455488.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.37	no
125439	gram_stain	BacteriaNetⓘ	positive	71.11	no
125439	motility	BacteriaNetⓘ	no	64.37	no
125439	spore_formation	BacteriaNetⓘ	no	82.85	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Anaeromyxobacter dehalogenans 2CP-1 2CP-1
NCBI: GCA_000022145.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	92.49	no
125438	anaerobic	anaerobicⓘ	no	74.30	no
125438	aerobic	aerobicⓘ	no	50.20	yes
125438	spore-forming	spore-formingⓘ	no	76.25	no
125438	thermophilic	thermophileⓘ	no	79.98	yes
125438	flagellated	motile2+ⓘ	yes	62.67	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Development and Validation of Broad-Range Qualitative and Clade-Specific Quantitative Molecular Probes for Assessing Mercury Methylation in the Environment.	Christensen GA, Wymore AM, King AJ, Podar M, Hurt RA, Santillan EU, Soren A, Brandt CC, Brown SD, Palumbo AV, Wall JD, Gilmour CC, Elias DA.	Appl Environ Microbiol	10.1128/aem.01271-16	2016
	Comparing the similarity of different groups of bacteria to the human proteome.	Trost B, Pajon R, Jayaprakash T, Kusalik A.	PLoS One	10.1371/journal.pone.0034007	2012
	Genomic analyses of bacterial porin-cytochrome gene clusters.	Shi L, Fredrickson JK, Zachara JM	Front Microbiol	10.3389/fmicb.2014.00657	2014
Phylogeny	Release of arsenic from soil by a novel dissimilatory arsenate-reducing bacterium, Anaeromyxobacter sp. strain PSR-1.	Kudo K, Yamaguchi N, Makino T, Ohtsuka T, Kimura K, Dong DT, Amachi S	Appl Environ Microbiol	10.1128/AEM.00693-13	2013
	Strain FAc12, a dissimilatory iron-reducing member of the Anaeromyxobacter subgroup of Myxococcales.	Treude N, Rosencrantz D, Liesack W, Schnell S	FEMS Microbiol Ecol	10.1016/S0168-6496(03)00048-5	2003
Phylogeny	Characterization and description of Anaeromyxobacter dehalogenans gen. nov., sp. nov., an aryl-halorespiring facultative anaerobic myxobacterium.	Sanford RA, Cole JR, Tiedje JM	Appl Environ Microbiol	10.1128/AEM.68.2.893-900.2002	2002
Phylogeny	Anaeromyxobacter oryzae sp. nov., Anaeromyxobacter diazotrophicus sp. nov. and Anaeromyxobacter paludicola sp. nov., isolated from paddy soils.	Itoh H, Xu Z, Mise K, Masuda Y, Ushijima N, Hayakawa C, Shiratori Y, Senoo K	Int J Syst Evol Microbiol	10.1099/ijsem.0.005546	2022

References

#16008	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21875
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Anaeromyxobacter dehalogenans (DSM 21875, ATCC BAA-258, 2CP-1)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000022145

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media