Achromobacter spanius (CIP 108199, DSM 23806, CCUG 47062)

Name: Achromobacter spanius (CIP 108199, DSM 23806, CCUG 47062)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 323

Type strain

Culture col. no. CIP 108199 DSM 23806 CCUG 47062 LMG 5911 API 198-2-84

NCBI tax ID(s) 217203

Special Collections DSMZ CCUG CIP Literature strains

History <- CCUG CIP <- 2003, CCUG <- 2002, LMG <- D. Monget, Api, La Balme-les-Grottes, France

Links

Achromobacter spanius CIP 108199 is an aerobe, Gram-negative, coccus-shaped bacterium that was isolated from human blood.

Gram-negative coccus-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 785

LMG 5911,CCUG 47062,CCM 7183,CIP 108199,DSM 23806

@ref 20215

Last LPSN update 2026-02-09 11:17:50

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Alcaligenaceae

Genus Achromobacter

Species Achromobacter spanius

Full scientific name Achromobacter spanius Coenye et al. 2003

BacDive ID	Other strains from **Achromobacter spanius** (9)	Type strain
311	A. spanius DSM 30031, ATCC 337, CCUG 228, NCTC 3233
321	A. spanius B1b, DSM 11386
137206	A. spanius CIP 102201
144353	A. spanius CCUG 24722, LMG 14525
146580	A. spanius CCUG 31491
152566	A. spanius CCUG 47063, LMG 5896
152567	A. spanius CCUG 47064, LMG 5909
153058	A. spanius CCUG 48395
156470	A. spanius CCUG 61956, LMG 26683

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell shape	Confidence
23266	negative	1-2 µm	coccus-shaped
122689	negative		rod-shaped
125439	negative			94.6
125438	negative			96.932

Colony morphology

@ref	Colony color	Medium used	Type of hemolysis
23266	white to light brown	nutrient agar
23266			gamma
122689

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
17376	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
23266	Nutrient agar (NA)
36557	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
122689	CIP Medium 328	Medium recipe at CIP
122689	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
17376	positive	growth	28
23266	positive	growth	28-37
36557	positive	growth	37
57491	positive	growth	30-42
122689	positive	growth	15-37
122689	negative	growth	5
122689	negative	growth	41
122689	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
57491	aerobe
122689	obligate aerobe
125438	aerobe	93.27

Spore formation

@ref	Spore formation	Confidence
125439		95.7
125438		90.889

Halophily

@ref	Salt	Growth	Tested relation	Concentration
122689	NaCl	positive	growth	0-4 %
122689	NaCl		growth	6 %
122689	NaCl		growth	8 %
122689	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
23266	32382 ChEBI	(R)-mandelate	-	growth
23266	32800 ChEBI	(S)-mandelic acid	-	growth
23266	16808 ChEBI	2-dehydro-D-gluconate	-	growth
23266	16808 ChEBI	2-dehydro-D-gluconate	+	growth
23266	87997 ChEBI	3-aminobutyrate	+	growth
23266	16193 ChEBI	3-hydroxybenzoate	-	growth
23266	16193 ChEBI	3-hydroxybenzoate	+	growth
23266	37054 ChEBI	3-hydroxybutyrate	+	growth
23266	17879 ChEBI	4-hydroxybenzoate	-	growth
23266	39150 ChEBI	4-oxopentanoate	-	growth
23266	15887 ChEBI	5-aminovaleric acid	-	growth
23266	17426 ChEBI	5-dehydro-D-gluconate	-	growth
23266	27856 ChEBI	acetamide	-	growth
23266	30089 ChEBI	acetate	+	growth
23266	22210 ChEBI	aconitate	-	growth
23266	17128 ChEBI	adipate	+	growth
23266	27613 ChEBI	amygdalin	-	growth
23266	18305 ChEBI	arbutin	-	growth
23266	78208 ChEBI	azelaate	+	growth
23266	16150 ChEBI	benzoate	-	growth
23266	40538 ChEBI	benzylamine	-	growth
23266	16958 ChEBI	beta-alanine	+	growth
23266	17750 ChEBI	betaine	-	growth
23266	43799 ChEBI	butan-1-amine	-	growth
23266	17968 ChEBI	butyrate	+	growth
23266	17057 ChEBI	cellobiose	-	growth
23266	16947 ChEBI	citrate	+	growth
122689	16947 ChEBI	citrate	-	carbon source
23266	16919 ChEBI	creatine	-	growth
23266	15570 ChEBI	D-alanine	+	growth
23266	17108 ChEBI	D-arabinose	-	growth
23266	18333 ChEBI	D-arabitol	-	growth
23266	15824 ChEBI	D-fructose	-	growth
23266	28847 ChEBI	D-fucose	-	growth
23266	17634 ChEBI	D-glucose	-	growth
23266	62318 ChEBI	D-lyxose	-	growth
23266	16024 ChEBI	D-mannose	-	growth
23266	16443 ChEBI	D-tagatose	-	growth
23266	65327 ChEBI	D-xylose	-	growth
23266	27689 ChEBI	decanoate	-	growth
23266	17113 ChEBI	erythritol	-	growth
23266	4853 ChEBI	esculin	-	growth
23266	4853 ChEBI	esculin	-	hydrolysis
122689	4853 ChEBI	esculin	-	hydrolysis
23266	16000 ChEBI	ethanolamine	-	growth
23266	15862 ChEBI	ethylamine	-	growth
23266	28757 ChEBI	fructose	-	growth
23266	29806 ChEBI	fumarate	+	growth
23266	16813 ChEBI	galactitol	-	growth
23266	28260 ChEBI	galactose	-	growth
23266	16865 ChEBI	gamma-aminobutyric acid	+	growth
23266	28066 ChEBI	gentiobiose	-	growth
23266	24265 ChEBI	gluconate	+	growth
23266	5417 ChEBI	glucosamine	-	growth
23266	17234 ChEBI	glucose	-	growth
23266	17859 ChEBI	glutaric acid	+	growth
23266	33871 ChEBI	glycerate	+	growth
23266	17754 ChEBI	glycerol	-	growth
23266	15428 ChEBI	glycine	-	growth
23266	28087 ChEBI	glycogen	-	growth
23266	29805 ChEBI	glycolate	-	growth
23266	32362 ChEBI	heptanoate	-	growth
122689	606565 ChEBI	hippurate	+	hydrolysis
23266	18295 ChEBI	histamine	-	growth
23266	15443 ChEBI	inulin	-	growth
23266	48944 ChEBI	isobutyrate	+	growth
23266	30803 ChEBI	isophthalate	-	growth
23266	17240 ChEBI	itaconate	+	growth
23266	28683 ChEBI	kynurenine	-	growth
23266	16977 ChEBI	L-alanine	+	growth
23266	30849 ChEBI	L-arabinose	-	growth
23266	18403 ChEBI	L-arabitol	-	growth
23266	16467 ChEBI	L-arginine	-	growth
23266	29991 ChEBI	L-aspartate	+	growth
23266	16349 ChEBI	L-citrulline	-	growth
23266	18287 ChEBI	L-fucose	-	growth
23266	29985 ChEBI	L-glutamate	+	growth
23266	15971 ChEBI	L-histidine	+	growth
23266	17191 ChEBI	L-isoleucine	+	growth
23266	15603 ChEBI	L-leucine	+	growth
23266	18019 ChEBI	L-lysine	-	growth
23266	16643 ChEBI	L-methionine	-	growth
23266	15729 ChEBI	L-ornithine	-	growth
23266	17295 ChEBI	L-phenylalanine	+	growth
23266	17203 ChEBI	L-proline	+	growth
23266	62345 ChEBI	L-rhamnose	-	growth
23266	17115 ChEBI	L-serine	+	growth
23266	17266 ChEBI	L-sorbose	-	growth
23266	16857 ChEBI	L-threonine	+	growth
23266	16828 ChEBI	L-tryptophan	+	growth
23266	17895 ChEBI	L-tyrosine	+	growth
23266	65328 ChEBI	L-xylose	-	growth
23266	24996 ChEBI	lactate	+	growth
23266	17716 ChEBI	lactose	-	growth
23266	25115 ChEBI	malate	+	growth
23266	15792 ChEBI	malonate	-	growth
122689	15792 ChEBI	malonate	-	assimilation
23266	17306 ChEBI	maltose	-	growth
23266	29864 ChEBI	mannitol	-	growth
23266	6731 ChEBI	melezitose	-	growth
23266	28053 ChEBI	melibiose	-	growth
23266	36986 ChEBI	mesaconate	-	growth
23266	30928 ChEBI	meso-tartrate	+	growth
23266	320061 ChEBI	methyl alpha-D-glucopyranoside	-	growth
23266	43943 ChEBI	methyl alpha-D-mannoside	-	growth
23266	74863 ChEBI	methyl beta-D-xylopyranoside	-	growth
23266	30860 ChEBI	methylmalonic acid	+	growth
23266	17268 ChEBI	myo-inositol	-	growth
23266	506227 ChEBI	N-acetylglucosamine	-	growth
23266	17632 ChEBI	nitrate	+	reduction
122689	17632 ChEBI	nitrate	-	builds gas from
122689	17632 ChEBI	nitrate	-	reduction
122689	17632 ChEBI	nitrate	-	respiration
23266	16301 ChEBI	nitrite	-	reduction
122689	16301 ChEBI	nitrite	-	builds gas from
122689	16301 ChEBI	nitrite	-	reduction
23266	32361 ChEBI	nonanoate	-	growth
23266	25646 ChEBI	octanoate	-	growth
23266	30623 ChEBI	oxalate	-	growth
23266	74848 ChEBI	pentan-1-amine	-	growth
23266	18401 ChEBI	phenylacetate	+	growth
23266	17563 ChEBI	phthalate	-	growth
23266	17774 ChEBI	pimelate	+	growth
23266	17272 ChEBI	propionate	+	growth
23266	17148 ChEBI	putrescine	+	growth
23266	15361 ChEBI	pyruvate	+	growth
23266	16634 ChEBI	raffinose	-	growth
23266	15963 ChEBI	ribitol	-	growth
23266	33942 ChEBI	ribose	-	growth
23266	17814 ChEBI	salicin	-	growth
23266	15611 ChEBI	sarcosine	-	growth
23266	41865 ChEBI	sebacic acid	+	growth
23266	30911 ChEBI	sorbitol	-	growth
23266	15746 ChEBI	spermine	-	growth
23266	28017 ChEBI	starch	-	growth
23266	9300 ChEBI	suberic acid	+	growth
23266	30031 ChEBI	succinate	+	growth
23266	17992 ChEBI	sucrose	-	growth
23266	30043 ChEBI	terephthalate	-	growth
23266	27082 ChEBI	trehalose	-	growth
23266	18123 ChEBI	trigonelline	-	growth
23266	16765 ChEBI	tryptamine	+	growth
23266	32528 ChEBI	turanose	-	growth
23266	53426 ChEBI	tween 80	-	growth
23266	16199 ChEBI	urea	-	growth
23266	31011 ChEBI	valerate	+	growth
23266	17151 ChEBI	xylitol	-	growth
23266	18222 ChEBI	xylose	-	growth

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
122689	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite
23266	16136 ChEBI	hydrogen sulfide
23266	35581 ChEBI	indole
122689	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
122689	15688 ChEBI	acetoin	-
122689	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
122689	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
23266	alpha-chymotrypsin	-	3.4.21.1
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
23266	alpha-fucosidase	-	3.2.1.51
68382	alpha-fucosidase	-	3.2.1.51	from API zym
23266	alpha-galactosidase	-	3.2.1.22
68382	alpha-galactosidase	-	3.2.1.22	from API zym
23266	alpha-glucosidase	-	3.2.1.20
68382	alpha-glucosidase	-	3.2.1.20	from API zym
23266	alpha-mannosidase	-	3.2.1.24
68382	alpha-mannosidase	-	3.2.1.24	from API zym
23266	amylase	-
122689	amylase	+
23266	arginine dihydrolase	-	3.5.3.6
23266	beta-galactosidase	-	3.2.1.23
68382	beta-galactosidase	-	3.2.1.23	from API zym
122689	beta-galactosidase	-	3.2.1.23
23266	beta-glucoronidase	-	3.2.1.31
23266	beta-glucosidase	-	3.2.1.21
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
122689	caseinase	-	3.4.21.50
23266	catalase	+	1.11.1.6
122689	catalase	+	1.11.1.6
23266	cystine arylamidase	-	3.4.11.3
68382	cystine arylamidase	-	3.4.11.3	from API zym
23266	cytochrome oxidase	+	1.9.3.1
23266	DNase	-
122689	DNase	-
23266	esterase (C 4)	+
68382	esterase (C 4)	+		from API zym
23266	esterase lipase (C 8)	-
68382	esterase lipase (C 8)	-		from API zym
122689	gamma-glutamyltransferase	+	2.3.2.2
23266	gelatinase	-
122689	gelatinase	+/-
122689	lecithinase	-
23266	leucine arylamidase	+	3.4.11.1
68382	leucine arylamidase	+	3.4.11.1	from API zym
122689	lipase	-
23266	lipase (C 14)	-
68382	lipase (C 14)	-		from API zym
23266	lysine decarboxylase	-	4.1.1.18
122689	lysine decarboxylase	-	4.1.1.18
23266	N-acetyl-beta-glucosaminidase	-	3.2.1.52
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
23266	ornithine decarboxylase	-	4.1.1.17
122689	ornithine decarboxylase	-	4.1.1.17
122689	oxidase	+
122689	phenylalanine ammonia-lyase	-	4.3.1.24
23266	trypsin	-	3.4.21.4
68382	trypsin	-	3.4.21.4	from API zym
122689	tryptophan deaminase	-
122689	tween esterase	-
23266	urease	-	3.5.1.5
122689	urease	-	3.5.1.5
23266	valine arylamidase	-
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
122689	-	-	+	-	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
122689	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	+	-	-	-	-	-	-	-	+	-	-	-	+	+	-	-	-	-	-	-	-	-	+	-	-	-	+	+	-	-	-	-	-	-	-	+	-	+	+	-	-	-	-	+	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Fluids	#Blood

Isolation

@ref	Sample type	Sampling date	Isolation date
17376	human blood
57491	Human blood	1984
122689	Human, Blood		1984

Taxonmaps

69479

Global distribution of 16S sequence JQ746427 (>99% sequence identity) for Achromobacter from Microbeatlas

Aquatic Samples	1212
Soil Samples	1429
Animal Samples	2896
Plant Samples	1751
Total Samples	7288

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
17376	yes, in single cases	1	Risk group (German classification) According to TRBA 466
122689		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM281270v1 assembly for Achromobacter spanius DSM 23806	complete	GCA_002812705	217203.10	2802429335	217203	97.26
66792	LMG 5911 assembly for Achromobacter spanius LMG 5911	contig	GCA_902859605	217203.24	8115110449	217203	66.34

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Achromobacter spanius strain CCUG 47062 16S ribosomal RNA gene, partial sequence	JQ746427	1309	217203
17376	Achromobacter sp. LMG 5911 16S ribosomal RNA gene, partial sequence	AY170848	1446	217203
124043	Achromobacter spanius strain LMG 5911 16S ribosomal RNA gene, partial sequence.	MN526952	485	217203

GC content

@ref	GC-content (mol%)	Method
17376	64.9
23266	64.9	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Achromobacter spanius strain DSM 23806
PATRIC: 217203.10

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	95.70	no
125439	motility	BacteriaNetⓘ	yes	80.90	no
125439	gram_stain	BacteriaNetⓘ	negative	94.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	86.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Achromobacter spanius DSM 23806
NCBI: GCA_002812705.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	96.93	no
125438	anaerobic	anaerobicⓘ	no	98.24	no
125438	aerobic	aerobicⓘ	yes	93.27	yes
125438	spore-forming	spore-formingⓘ	no	90.89	no
125438	thermophilic	thermophileⓘ	no	97.25	no
125438	flagellated	motile2+ⓘ	yes	84.83	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Complete Genome Sequence of Achromobacter spanius UQ283, a Soilborne Isolate Exhibiting Plant Growth-Promoting Properties.	Wass TJ, Syed-Ab-Rahman SF, Carvalhais LC, Ferguson BJ, Schenk PM.	Microbiol Resour Announc	10.1128/mra.00236-19	2019
	Draft Genome Sequence of Achromobacter spanius Strain 6, a Soil Bacterium Isolated from a Hydrocarbon-Degrading Microcosm.	Gunasekera TS, Radwan O, Bowen LL, Brown LM, Ruiz ON.	Microbiol Resour Announc	10.1128/mra.01124-18	2018
	Complete Genome Sequence of the Hydrocarbon-Degrading Strain Achromobacter sp. B7, Isolated during Petroleum Hydrocarbon Bioremediation in the Valparaiso Region, Chile.	Mendez V, Hernandez L, Salva-Serra F, Jaen-Luchoro D, Duran RE, Barra B, Pineiro-Iglesias B, Moore ERB, Seeger M.	Microbiol Resour Announc	10.1128/mra.01326-18	2018
Phylogeny	Multilocus sequence analysis of isolates of Achromobacter from patients with cystic fibrosis reveals infecting species other than Achromobacter xylosoxidans.	Ridderberg W, Wang M, Norskov-Lauritsen N.	J Clin Microbiol	10.1128/jcm.00728-12	2012
	A longitudinal pilot study in pre-menopausal women links cervicovaginal microbiome to CIN3 progression and recovery.	Banila C, Ladoukakis E, Scibior-Bentkowska D, Santiago LR, Reuter C, Kleeman M, Nedjai B.	Commun Biol	10.1038/s42003-025-08328-w	2025
	Identification and characterization of Achromobacter spanius P-9 and elucidation of its deoxynivalenol-degrading potential.	Yao F, Du Y, Tian S, Chang G, Zhang Y, Zhu R, Cai C, Shao S, Zhou T.	Arch Microbiol	10.1007/s00203-024-03864-1	2024
	Isolation and Characterisation of Bacteria From an Extremely High Boron and Salinity-Tolerant Puccinellia distans (Jacq.) Parl. Rhizosphere and Their Potential Impact on the Growth of Bread Wheat (Triticum aestivum L.).	Eken N, Ates O, Cakmakci R, Karaca UC, Gezgin S, Hakki EE.	Environ Microbiol Rep	10.1111/1758-2229.70105	2025
	Biogenic Zinc nanoparticles: green approach to synthesis, characterization, and antimicrobial applications.	Ouf MSM, Duab MEA, Abdel-Meguid DI, El-Sharouny EE, Soliman NA.	Microb Cell Fact	10.1186/s12934-025-02788-9	2025
	Isolation of bacterial strains from compost teas and screening of their PGPR properties on potato plants.	Samet M, Ghazala I, Karray F, Abid C, Chiab N, Nouri-Ellouz O, Sayadi S, Gargouri-Bouzid R.	Environ Sci Pollut Res Int	10.1007/s11356-022-21046-8	2022
	A longitudinal pilot study in pre-menopausal women links cervicovaginal microbiome to CIN3 progression and recovery	Banila C, Ladoukakis E, Scibior-Bentkowska D, Santiago L, Reuter C, Kleeman M, Nedjai B.	Commun Biol		2025
	Assessing hydrolytic enzyme production ability of bacterial strains from bovine manure as potential biowaste conversion candidates.	Aiysha D, Latif Z.	J Basic Microbiol	10.1002/jobm.202100294	2022
	Identification of natural pathogens from wild Drosophila suzukii.	Bing XL, Winkler J, Gerlach J, Loeb G, Buchon N.	Pest Manag Sci	10.1002/ps.6235	2021
	Role of heavy metal tolerant rhizosphere bacteria in the phytoremediation of Cu and Pb using Eichhornia crassipes (Mart.) Solms.	Kabeer R, V P S, C S PK, A P T, V S, E K R, K R B.	Int J Phytoremediation	10.1080/15226514.2021.2007215	2022
	Evaluation of endosulfan degradation capacity by six pure strains isolated from a horticulture soil.	Casanova A, Cabrera S, Diaz-Ruiz G, Hernandez S, Wacher C, Zubillaga M, Ortiz I.	Folia Microbiol (Praha)	10.1007/s12223-021-00899-5	2021
	Complete Biodegradation of Diclofenac by New Bacterial Strains: Postulated Pathways and Degrading Enzymes.	Mohamed MSM, Asair AA, Fetyan NAH, Elnagdy SM.	Microorganisms	10.3390/microorganisms11061445	2023
	Kerosene tolerance in Achromobacter and Pseudomonas species	Stancu MM.	Ann Microbiol		2020
	Analysis of a Novel Bacteriophage vB_AchrS_AchV4 Highlights the Diversity of Achromobacter Viruses.	Kaliniene L, Noreika A, Kaupinis A, Valius M, Jurgelaitis E, Lazutka J, Meskiene R, Meskys R.	Viruses	10.3390/v13030374	2021
	Achromobacter in the Conjunctival Sac Microbiota: Potential Association With Acanthamoeba Keratitis Related to Orthokeratology Lenses.	Shi Q, Wei Z, Pang J, Qudsi AI, Wei M, Zhang Z, Zhang Y, Wang Z, Chen K, Xu X, Lu X, Liang Q.	Invest Ophthalmol Vis Sci	10.1167/iovs.66.9.71	2025
	In Vitro Evaluation of Weizmannia coagulans Strain LMG S-31876 Isolated from Fermented Rice for Potential Probiotic Properties, Safety Assessment and Technological Properties.	Sreenadh M, Kumar KR, Nath S.	Life (Basel)	10.3390/life12091388	2022
	Mjuua agapanthi gen. et sp. nov., a biotrophic mycoparasite of Fusarium spp.	Crous PW, Dijksterhuis J, Figge M, Figge M, Sandoval-Denis M.	Fungal Syst Evol	10.3114/fuse.2024.13.09	2024
Enzymology	Achromobacter buckle infection diagnosed by a 16S rDNA clone library analysis: a case report.	Hotta F, Eguchi H, Naito T, Mitamura Y, Kusujima K, Kuwahara T.	BMC Ophthalmol	10.1186/1471-2415-14-142	2014
Pathogenicity	Host Species Affects Gut Microbial Community and Offspring Developmental Performances in the Pupal Parasitoid Chouioia cunea Yang (Hymenoptera: Eulophidae).	Pan L, Liao J, Hu Y, Ren R, Chen W, Liang Z, Lu F, Sun M, Song Z, Li X, Zhang W, Gao W, Yan C, Li M.	Insects	10.3390/insects15090722	2024
	Tolerance and growth kinetics of bacteria isolated from gold and gemstone mining sites in response to heavy metal concentrations.	Oladipo OG, Ezeokoli OT, Maboeta MS, Bezuidenhout JJ, Tiedt LR, Jordaan A, Bezuidenhout CC.	J Environ Manage	10.1016/j.jenvman.2018.01.038	2018
	Antibacterial Effect of Zinc Oxide-Based Nanomaterials on Environmental Biodeteriogens Affecting Historical Buildings.	Schifano E, Cavallini D, De Bellis G, Bracciale MP, Felici AC, Santarelli ML, Sarto MS, Uccelletti D.	Nanomaterials (Basel)	10.3390/nano10020335	2020
	Cefiderocol susceptibility of Achromobacter spp.: study of an accurately identified collection of 230 strains.	Jean-Pierre V, Sorlin P, Pantel A, Chiron R, Lavigne JP, Jeannot K, Marchandin H, Collaborative study group on antimicrobial resistance of Achromobacter spp..	Ann Clin Microbiol Antimicrob	10.1186/s12941-024-00709-z	2024
	Culturing Ancient Bacteria Carrying Resistance Genes from Permafrost and Comparative Genomics with Modern Isolates.	Afouda P, Dubourg G, Levasseur A, Fournier PE, Delerce J, Mediannikov O, Diene SM, Nahon D, Bourles D, Rolain JM, Raoult D.	Microorganisms	10.3390/microorganisms8101522	2020
	Characterization of the Pathogenic Potential of the Beach Sand Microbiome and Assessment of Quicklime as a Remediation Tool.	Soffritti I, D'Accolti M, Bini F, Mazziga E, Volta A, Bisi M, Rossi S, Viroli F, Balzani M, Petitta M, Mazzacane S, Caselli E.	Microorganisms	10.3390/microorganisms11082031	2023
	Prevalence and variability of siderophore production in the Achromobacter genus.	Sorlin P, Brivet E, Jean-Pierre V, Aujoulat F, Besse A, Dupont C, Chiron R, Jumas-Bilak E, Menetrey Q, Marchandin H.	Microbiol Spectr	10.1128/spectrum.02953-23	2024
	Presence of Broad-Spectrum Beta-Lactamase-Producing Enterobacteriaceae in Zoo Mammals.	De Witte C, Vereecke N, Theuns S, De Ruyck C, Vercammen F, Bouts T, Boyen F, Nauwynck H, Haesebrouck F.	Microorganisms	10.3390/microorganisms9040834	2021
	Combined Use of a Bacterial Consortium and Early-Colonizing Plants as a Treatment for Soil Recovery after Fire: A Model Based on Los Guájares (Granada, Spain) Wildfire.	Niza Costa M, Gil T, Teixeira R, Rodrigues Dos Santos AS, Rebelo Romao I, Sequero Lopez C, Vilchez JI.	Biology (Basel)	10.3390/biology12081093	2023
	In vivo application of potent probiotics for enhancing potato growth and controlling Ralstonia solanacearum and Fusarium oxysporum infections.	Abdel-Moghies AH, El-Sehrawy MH, Zakaria AE, Fahmy SM.	Antonie Van Leeuwenhoek	10.1007/s10482-024-01928-2	2024
Genetics	Comparative genomics of HORMA domain-containing proteins in prokaryotes and eukaryotes.	Almutairi ZM.	Cell Cycle	10.1080/15384101.2018.1553402	2018
	Comparative effects of soy protein concentrate, enzyme-treated soybean meal, and fermented soybean meal replacing animal protein supplements in feeds on growth performance and intestinal health of nursery pigs.	Deng Z, Duarte ME, Kim SY, Hwang Y, Kim SW.	J Anim Sci Biotechnol	10.1186/s40104-023-00888-3	2023
	Phagotrophic protists preserve antibiotic-resistant opportunistic human pathogens in the vegetable phyllosphere.	Lin C, Li LJ, Ren K, Zhou SY, Isabwe A, Yang LY, Neilson R, Yang XR, Cytryn E, Zhu YG.	ISME Commun	10.1038/s43705-023-00302-z	2023
	Evaluating Nitrogen-Containing Biosynthetic Products Produced by Saltwater Culturing of Several California Littoral Zone Gram-Negative Bacteria.	Lorig-Roach N, Still PC, Coppage D, Compton JE, Crews MS, Navarro G, Tenney K, Crews P.	J Nat Prod	10.1021/acs.jnatprod.7b00302	2017
	Adaptive Interactions of Achromobacter spp. with Pseudomonas aeruginosa in Cystic Fibrosis Chronic Lung Co-Infection.	Sandri A, Haagensen JAJ, Veschetti L, Johansen HK, Molin S, Malerba G, Signoretto C, Boaretti M, Lleo MM.	Pathogens	10.3390/pathogens10080978	2021
	Response of peanut (Arachis hypogaea L.) plant to bio-fertilizer and plant residues in sandy soil.	El-Sherbeny TMS, Mousa AM, Zhran MA.	Environ Geochem Health	10.1007/s10653-022-01302-z	2023
Proteome	Metabolic Profiling and Comparative Proteomic Insight in Respect of Amidases during Iprodione Biodegradation.	Donoso-Pinol P, Briceno G, Evaristo JAM, Nogueira FCS, Leiva B, Lamilla C, Schalchli H, Diez MC.	Microorganisms	10.3390/microorganisms11102367	2023
	Bioaugmentation of PAH-Contaminated Soils With Novel Specific Degrader Strains Isolated From a Contaminated Industrial Site. Effect of Hydroxypropyl-beta-Cyclodextrin as PAH Bioavailability Enhancer.	Villaverde J, Laiz L, Lara-Moreno A, Gonzalez-Pimentel JL, Morillo E.	Front Microbiol	10.3389/fmicb.2019.02588	2019
Metabolism	Community-based degradation of 4-chorosalicylate tracked on the single cell level.	Pawelczyk S, Abraham WR, Harms H, Muller S.	J Microbiol Methods	10.1016/j.mimet.2008.05.018	2008
Metabolism	Pesticide-tolerant bacteria isolated from a biopurification system to remove commonly used pesticides to protect water resources.	Briceno G, Lamilla C, Leiva B, Levio M, Donoso-Pinol P, Schalchli H, Gallardo F, Diez MC.	PLoS One	10.1371/journal.pone.0234865	2020
Phylogeny	Genomic characterization of Achromobacter species isolates from chronic and occasional lung infection in cystic fibrosis patients.	Veschetti L, Sandri A, Patuzzo C, Melotti P, Malerba G, Lleo MM.	Microb Genom	10.1099/mgen.0.000606	2021
	Diversity and Biocontrol Potential of Cultivable Endophytic Bacteria Associated with Halophytes from the West Aral Sea Basin.	Gao L, Ma J, Liu Y, Huang Y, Mohamad OAA, Jiang H, Egamberdieva D, Li W, Li L.	Microorganisms	10.3390/microorganisms9071448	2021
	Endocervical and vaginal microbiota in South African adolescents with asymptomatic Chlamydia trachomatis infection.	Balle C, Lennard K, Dabee S, Barnabas SL, Jaumdally SZ, Gasper MA, Maseko V, Mbulawa ZZA, Williamson AL, Bekker LG, Lewis DA, Passmore JS, Jaspan HB.	Sci Rep	10.1038/s41598-018-29320-x	2018
Pathogenicity	Formulation of Biocides Increases Antimicrobial Potency and Mitigates the Enrichment of Nonsusceptible Bacteria in Multispecies Biofilms.	Forbes S, Cowley N, Humphreys G, Mistry H, Amezquita A, McBain AJ.	Appl Environ Microbiol	10.1128/aem.03054-16	2017
	Diversity, distribution, and antagonistic activities of rhizobacteria of Panax notoginseng.	Fan ZY, Miao CP, Qiao XG, Zheng YK, Chen HH, Chen YW, Xu LH, Zhao LX, Guan HL.	J Ginseng Res	10.1016/j.jgr.2015.05.003	2016
Phylogeny	Duplex real-time PCR assay for the simultaneous detection of Achromobacter xylosoxidans and Achromobacter spp.	Price EP, Soler Arango V, Kidd TJ, Fraser TA, Nguyen TK, Bell SC, Sarovich DS.	Microb Genom	10.1099/mgen.0.000406	2020
	Metagenomic Shotgun Sequencing of Endocervical, Vaginal, and Rectal Samples among Fijian Women with and without Chlamydia trachomatis Reveals Disparate Microbial Populations and Function across Anatomic Sites: a Pilot Study.	Bommana S, Richards G, Kama M, Kodimerla R, Jijakli K, Read TD, Dean D.	Microbiol Spectr	10.1128/spectrum.00105-22	2022
	Persistent oseltamivir-resistant pandemic influenza A/H1N1 infection in an adult with cystic fibrosis.	Flight WG, Bright-Thomas R, Mutton K, Webb K, Jones A.	BMJ Case Rep	10.1136/bcr.02.2011.3874	2011
	Characterization of the Achromobacter xylosoxidans Type VI Secretion System and Its Implication in Cystic Fibrosis.	Le Goff M, Vastel M, Lebrun R, Mansuelle P, Diarra A, Grandjean T, Triponney P, Imbert G, Gosset P, Dessein R, Garnier F, Durand E.	Front Cell Infect Microbiol	10.3389/fcimb.2022.859181	2022
	Appraisal of diversity and functional attributes of thermotolerant wheat associated bacteria from the peninsular zone of India.	Verma P, Yadav AN, Khannam KS, Mishra S, Kumar S, Kumar S, Saxena AK, Suman A.	Saudi J Biol Sci	10.1016/j.sjbs.2016.01.042	2019
	Chronic Airway Colonization by Achromobacter xylosoxidans in Cystic Fibrosis Patients Is Not Sustained by Their Domestic Environment.	Dupont C, Jumas-Bilak E, Doisy C, Aujoulat F, Chiron R, Marchandin H.	Appl Environ Microbiol	10.1128/aem.01739-18	2018
Metabolism	Aerobic and oxygen-limited naphthalene-amended enrichments induced the dominance of Pseudomonas spp. from a groundwater bacterial biofilm.	Benedek T, Szentgyorgyi F, Szabo I, Farkas M, Duran R, Kriszt B, Tancsics A.	Appl Microbiol Biotechnol	10.1007/s00253-020-10668-y	2020
Phylogeny	Metagenomic analysis of the complex microbial consortium associated with cultures of the oil-rich alga Botryococcus braunii.	Sambles C, Moore K, Lux TM, Jones K, Littlejohn GR, Gouveia JD, Aves SJ, Studholme DJ, Lee R, Love J.	Microbiologyopen	10.1002/mbo3.482	2017
Phylogeny	A multilocus sequence typing scheme implies population structure and reveals several putative novel Achromobacter species.	Spilker T, Vandamme P, Lipuma JJ.	J Clin Microbiol	10.1128/jcm.00814-12	2012
Enzymology	Prevalence and Outcomes of Achromobacter Species Infections in Adults with Cystic Fibrosis: a North American Cohort Study.	Edwards BD, Greysson-Wong J, Somayaji R, Waddell B, Whelan FJ, Storey DG, Rabin HR, Surette MG, Parkins MD.	J Clin Microbiol	10.1128/jcm.02556-16	2017
	Achromobacter Infections and Treatment Options.	Isler B, Kidd TJ, Stewart AG, Harris P, Paterson DL.	Antimicrob Agents Chemother	10.1128/aac.01025-20	2020
Metabolism	Genome of Ca. Pandoraea novymonadis, an Endosymbiotic Bacterium of the Trypanosomatid Novymonas esmeraldas.	Kostygov AY, Butenko A, Nenarokova A, Tashyreva D, Flegontov P, Lukes J, Yurchenko V.	Front Microbiol	10.3389/fmicb.2017.01940	2017
	A Tn5051-like mer-containing transposon identified in a heavy metal tolerant strain Achromobacter sp. AO22.	Ng SP, Davis B, Palombo EA, Bhave M.	BMC Res Notes	10.1186/1756-0500-2-38	2009
Pathogenicity	Antibiotic-induced change of bacterial communities associated with the copepod Nitocra spinipes.	Edlund A, Ek K, Breitholtz M, Gorokhova E.	PLoS One	10.1371/journal.pone.0033107	2012
Phylogeny	Metaproteogenomic insights beyond bacterial response to naphthalene exposure and bio-stimulation.	Guazzaroni ME, Herbst FA, Lores I, Tamames J, Pelaez AI, Lopez-Cortes N, Alcaide M, Del Pozo MV, Vieites JM, von Bergen M, Gallego JL, Bargiela R, Lopez-Lopez A, Pieper DH, Rossello-Mora R, Sanchez J, Seifert J, Ferrer M.	ISME J	10.1038/ismej.2012.82	2013
Phylogeny	Evaluation of matrix-assisted laser desorption ionization-time-of-flight mass spectrometry in comparison to 16S rRNA gene sequencing for species identification of nonfermenting bacteria.	Mellmann A, Cloud J, Maier T, Keckevoet U, Ramminger I, Iwen P, Dunn J, Hall G, Wilson D, Lasala P, Kostrzewa M, Harmsen D.	J Clin Microbiol	10.1128/jcm.00157-08	2008
Genetics	Complete genome sequence of Achromobacter spanius type strain DSM 23806(T), a pathogen isolated from human blood.	Li G, Yang L, Zhang T, Guo X, Qin J, Cao Y, Yang Q, You S, Yuan G, Wan X, Luo J, Li Z, Gao L, Liu Y, Jiang K, Zheng J	J Glob Antimicrob Resist	10.1016/j.jgar.2018.05.003	2018
Phylogeny	Achromobacter insolitus sp. nov. and Achromobacter spanius sp. nov., from human clinical samples.	Coenye T, Vancanneyt M, Falsen E, Swings J, Vandamme P	Int J Syst Evol Microbiol	10.1099/ijs.0.02698-0	2003

References

#17376	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23806
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#23266	Tom Coenye, Marc Vancanneyt, Enevold Falsen, Jean Swings, Peter Vandamme: Achromobacter insolitus sp. nov. and Achromobacter spanius sp. nov., from human clinical samples. IJSEM 53: 1819 - 1824 2003 ( DOI 10.1099/ijs.0.02698-0 , PubMed 14657110 )
#36557	; Curators of the CIP;
#57491	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 47062
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#122689	Collection of Institut Pasteur ; Curators of the CIP; CIP 108199
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Achromobacter spanius (CIP 108199, DSM 23806, CCUG 47062)

Name and taxonomic classification

Morphology

Cell morphology

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Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

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Halophily

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Metabolite production

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API zym

API biotype100

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Genome browser: GCA_002812705

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