Name: Achromobacter spanius CIP 108199
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 323

Type strain:

Species: Achromobacter spanius

Culture col. no.: CIP 108199, DSM 23806, CCUG 47062, LMG 5911, API 198-2-84

Strain history: CIP <- 2003, CCUG <- 2002, LMG <- D. Monget, Api, La Balme-les-Grottes, France

NCBI tax ID(s): 217203 (species)

SI-ID 785

LMG 5911, CCUG 47062, CCM 7183, CIP 108199, DSM 23806

Special Collections

Other strains from Achromobacter spanius

Section

When using BacDive for research please cite our paper

Achromobacter spanius CIP 108199 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from human blood.

coccus-shaped
Gram-negative
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Alcaligenaceae*
	Genus	*Achromobacter*
	Species	**Achromobacter spanius**
	Full Scientific Name (LPSN)	Achromobacter spanius Coenye et al. 2003

Information on morphological and physiological properties Morphology

[Ref.: #23266]	Gram stain	negative
[Ref.: #122689]	Gram stain	negative
[Ref.: #125439]	Gram stain	negative Confidence in %94.6
[Ref.: #125438]	Gram stain	negative Confidence in %96.932

[Ref.: #23266]	Cell length	1-2 µm

[Ref.: #23266]	Cell shape	coccus-shaped
[Ref.: #122689]	Cell shape	rod-shaped

[Ref.: #122689]	Motility	yes

[Ref.: #23266]	Type of hemolysis	gamma

[Ref.: #23266]	Colony color	white to light brown
[Ref.: #23266]	Cultivation medium used	nutrient agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17376]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #17376]

Culture medium growth

[Ref.: #17376]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17376]

Culture medium composition

expand / minimize

[Ref.: #23266]

Culture medium

Nutrient agar (NA)

[Ref.: #23266]

Culture medium growth

[Ref.: #36557]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #36557]

Culture medium growth

[Ref.: #36557]

Culture medium composition

expand / minimize

[Ref.: #122689]

Culture medium

CIP Medium 328

[Ref.: #122689]

Culture medium growth

[Ref.: #122689]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #122689]

Culture medium

CIP Medium 72

[Ref.: #122689]

Culture medium growth

[Ref.: #122689]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #17376]		growth	28 °C
[Ref.: #23266]		growth	28-37 °C
[Ref.: #36557]		growth	37 °C
[Ref.: #57491]		growth	30-42 °C
[Ref.: #122689]		growth	15-37 °C
[Ref.: #122689]	negative	growth	5 °C
[Ref.: #122689]	negative	growth	41 °C
[Ref.: #122689]	negative	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #57491]	Oxygen tolerance	aerobe
[Ref.: #122689]	Oxygen tolerance	obligate aerobe
[Ref.: #125438]	Oxygen tolerance	aerobe Confidence in %93.27

[Ref.: #125439]	Ability of spore formation	no Confidence in %95.7
[Ref.: #125438]	Ability of spore formation	no Confidence in %90.889

	Salt	Tested relation		Salt conc.
[Ref.: #122689]	NaCl		growth	0-4	%
[Ref.: #122689]	NaCl	no	growth	6	%
[Ref.: #122689]	NaCl	no	growth	8	%
[Ref.: #122689]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23266]	(R)-mandelate ChEBI	-	growth
[Ref.: #23266]	(S)-mandelic acid ChEBI	-	growth
[Ref.: #23266]	2-dehydro-D-gluconate ChEBI	-	growth
[Ref.: #23266]	2-dehydro-D-gluconate ChEBI	+	growth
[Ref.: #23266]	3-aminobutyrate ChEBI	+	growth
[Ref.: #23266]	3-hydroxybenzoate ChEBI	-	growth
[Ref.: #23266]	3-hydroxybenzoate ChEBI	+	growth
[Ref.: #23266]	3-hydroxybutyrate ChEBI	+	growth
[Ref.: #23266]	4-hydroxybenzoate ChEBI	-	growth
[Ref.: #23266]	4-oxopentanoate ChEBI	-	growth
[Ref.: #23266]	5-aminovaleric acid ChEBI	-	growth
[Ref.: #23266]	5-dehydro-D-gluconate ChEBI	-	growth
[Ref.: #23266]	acetamide ChEBI	-	growth
[Ref.: #23266]	acetate ChEBI	+	growth
[Ref.: #23266]	aconitate ChEBI	-	growth
[Ref.: #23266]	adipate ChEBI	+	growth
[Ref.: #23266]	amygdalin ChEBI	-	growth
[Ref.: #23266]	arbutin ChEBI	-	growth
[Ref.: #23266]	azelaate ChEBI	+	growth
[Ref.: #23266]	benzoate ChEBI	-	growth
[Ref.: #23266]	benzylamine ChEBI	-	growth
[Ref.: #23266]	beta-alanine ChEBI	+	growth
[Ref.: #23266]	betaine ChEBI	-	growth
[Ref.: #23266]	butan-1-amine ChEBI	-	growth
[Ref.: #23266]	butyrate ChEBI	+	growth
[Ref.: #23266]	cellobiose ChEBI	-	growth
[Ref.: #23266]	citrate ChEBI	+	growth
[Ref.: #122689]	citrate ChEBI	-	carbon source
[Ref.: #23266]	creatine ChEBI	-	growth
[Ref.: #23266]	D-alanine ChEBI	+	growth
[Ref.: #23266]	D-arabinose ChEBI	-	growth
[Ref.: #23266]	D-arabitol ChEBI	-	growth
[Ref.: #23266]	D-fructose ChEBI	-	growth
[Ref.: #23266]	D-fucose ChEBI	-	growth
[Ref.: #23266]	D-glucose ChEBI	-	growth
[Ref.: #23266]	D-lyxose ChEBI	-	growth
[Ref.: #23266]	D-mannose ChEBI	-	growth
[Ref.: #23266]	D-tagatose ChEBI	-	growth
[Ref.: #23266]	D-xylose ChEBI	-	growth
[Ref.: #23266]	decanoate ChEBI	-	growth
[Ref.: #23266]	erythritol ChEBI	-	growth
[Ref.: #23266]	esculin ChEBI	-	growth
[Ref.: #23266]	esculin ChEBI	-	hydrolysis
[Ref.: #122689]	esculin ChEBI	-	hydrolysis
[Ref.: #23266]	ethanolamine ChEBI	-	growth
[Ref.: #23266]	ethylamine ChEBI	-	growth
[Ref.: #23266]	fructose ChEBI	-	growth
[Ref.: #23266]	fumarate ChEBI	+	growth
[Ref.: #23266]	galactitol ChEBI	-	growth
[Ref.: #23266]	galactose ChEBI	-	growth
[Ref.: #23266]	gamma-aminobutyric acid ChEBI	+	growth
[Ref.: #23266]	gentiobiose ChEBI	-	growth
[Ref.: #23266]	gluconate ChEBI	+	growth
[Ref.: #23266]	glucosamine ChEBI	-	growth
[Ref.: #23266]	glucose ChEBI	-	growth
[Ref.: #23266]	glutaric acid ChEBI	+	growth
[Ref.: #23266]	glycerate ChEBI	+	growth
[Ref.: #23266]	glycerol ChEBI	-	growth
[Ref.: #23266]	glycine ChEBI	-	growth
[Ref.: #23266]	glycogen ChEBI	-	growth
[Ref.: #23266]	glycolate ChEBI	-	growth
[Ref.: #23266]	heptanoate ChEBI	-	growth
[Ref.: #122689]	hippurate ChEBI	+	hydrolysis
[Ref.: #23266]	histamine ChEBI	-	growth
[Ref.: #23266]	inulin ChEBI	-	growth
[Ref.: #23266]	isobutyrate ChEBI	+	growth
[Ref.: #23266]	isophthalate ChEBI	-	growth
[Ref.: #23266]	itaconate ChEBI	+	growth
[Ref.: #23266]	kynurenine ChEBI	-	growth
[Ref.: #23266]	L-alanine ChEBI	+	growth
[Ref.: #23266]	L-arabinose ChEBI	-	growth
[Ref.: #23266]	L-arabitol ChEBI	-	growth
[Ref.: #23266]	L-arginine ChEBI	-	growth
[Ref.: #23266]	L-aspartate ChEBI	+	growth
[Ref.: #23266]	L-citrulline ChEBI	-	growth
[Ref.: #23266]	L-fucose ChEBI	-	growth
[Ref.: #23266]	L-glutamate ChEBI	+	growth
[Ref.: #23266]	L-histidine ChEBI	+	growth
[Ref.: #23266]	L-isoleucine ChEBI	+	growth
[Ref.: #23266]	L-leucine ChEBI	+	growth
[Ref.: #23266]	L-lysine ChEBI	-	growth
[Ref.: #23266]	L-methionine ChEBI	-	growth
[Ref.: #23266]	L-ornithine ChEBI	-	growth
[Ref.: #23266]	L-phenylalanine ChEBI	+	growth
[Ref.: #23266]	L-proline ChEBI	+	growth
[Ref.: #23266]	L-rhamnose ChEBI	-	growth
[Ref.: #23266]	L-serine ChEBI	+	growth
[Ref.: #23266]	L-sorbose ChEBI	-	growth
[Ref.: #23266]	L-threonine ChEBI	+	growth
[Ref.: #23266]	L-tryptophan ChEBI	+	growth
[Ref.: #23266]	L-tyrosine ChEBI	+	growth
[Ref.: #23266]	L-xylose ChEBI	-	growth
[Ref.: #23266]	lactate ChEBI	+	growth
[Ref.: #23266]	lactose ChEBI	-	growth
[Ref.: #23266]	malate ChEBI	+	growth
[Ref.: #23266]	malonate ChEBI	-	growth
[Ref.: #122689]	malonate ChEBI	-	assimilation
[Ref.: #23266]	maltose ChEBI	-	growth
[Ref.: #23266]	mannitol ChEBI	-	growth
[Ref.: #23266]	melezitose ChEBI	-	growth
[Ref.: #23266]	melibiose ChEBI	-	growth
[Ref.: #23266]	mesaconate ChEBI	-	growth
[Ref.: #23266]	meso-tartrate ChEBI	+	growth
[Ref.: #23266]	methyl alpha-D-glucopyranoside ChEBI	-	growth
[Ref.: #23266]	methyl alpha-D-mannoside ChEBI	-	growth
[Ref.: #23266]	methyl beta-D-xylopyranoside ChEBI	-	growth
[Ref.: #23266]	methylmalonic acid ChEBI	+	growth
[Ref.: #23266]	myo-inositol ChEBI	-	growth
[Ref.: #23266]	N-acetylglucosamine ChEBI	-	growth
[Ref.: #23266]	nitrate ChEBI	+	reduction
[Ref.: #122689]	nitrate ChEBI	-	builds gas from
[Ref.: #122689]	nitrate ChEBI	-	reduction
[Ref.: #122689]	nitrate ChEBI	-	respiration
[Ref.: #23266]	nitrite ChEBI	-	reduction
[Ref.: #122689]	nitrite ChEBI	-	builds gas from
[Ref.: #122689]	nitrite ChEBI	-	reduction
[Ref.: #23266]	nonanoate ChEBI	-	growth
[Ref.: #23266]	octanoate ChEBI	-	growth
[Ref.: #23266]	oxalate ChEBI	-	growth
[Ref.: #23266]	pentan-1-amine ChEBI	-	growth
[Ref.: #23266]	phenylacetate ChEBI	+	growth
[Ref.: #23266]	phthalate ChEBI	-	growth
[Ref.: #23266]	pimelate ChEBI	+	growth
[Ref.: #23266]	propionate ChEBI	+	growth
[Ref.: #23266]	putrescine ChEBI	+	growth
[Ref.: #23266]	pyruvate ChEBI	+	growth
[Ref.: #23266]	raffinose ChEBI	-	growth
[Ref.: #23266]	ribitol ChEBI	-	growth
[Ref.: #23266]	ribose ChEBI	-	growth
[Ref.: #23266]	salicin ChEBI	-	growth
[Ref.: #23266]	sarcosine ChEBI	-	growth
[Ref.: #23266]	sebacic acid ChEBI	+	growth
[Ref.: #23266]	sorbitol ChEBI	-	growth
[Ref.: #23266]	spermine ChEBI	-	growth
[Ref.: #23266]	starch ChEBI	-	growth
[Ref.: #23266]	suberic acid ChEBI	+	growth
[Ref.: #23266]	succinate ChEBI	+	growth
[Ref.: #23266]	sucrose ChEBI	-	growth
[Ref.: #23266]	terephthalate ChEBI	-	growth
[Ref.: #23266]	trehalose ChEBI	-	growth
[Ref.: #23266]	trigonelline ChEBI	-	growth
[Ref.: #23266]	tryptamine ChEBI	+	growth
[Ref.: #23266]	turanose ChEBI	-	growth
[Ref.: #23266]	tween 80 ChEBI	-	growth
[Ref.: #23266]	urea ChEBI	-	growth
[Ref.: #23266]	valerate ChEBI	+	growth
[Ref.: #23266]	xylitol ChEBI	-	growth
[Ref.: #23266]	xylose ChEBI	-	growth
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #122689]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite	Production
[Ref.: #23266]	hydrogen sulfide ChEBI	no
[Ref.: #23266]	indole ChEBI	no
[Ref.: #122689]	indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #122689]		acetoin ChEBI	-
[Ref.: #122689]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #122689]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #23266]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #23266]	alpha-fucosidase	-	3.2.1.51
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #23266]	alpha-galactosidase	-	3.2.1.22
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #23266]	alpha-glucosidase	-	3.2.1.20
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #23266]	alpha-mannosidase	-	3.2.1.24
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #23266]	amylase	-
[Ref.: #122689]	amylase	+
[Ref.: #23266]	arginine dihydrolase	-	3.5.3.6
[Ref.: #23266]	beta-galactosidase	-	3.2.1.23
[Ref.: #122689]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #23266]	beta-glucoronidase	-	3.2.1.31
[Ref.: #23266]	beta-glucosidase	-	3.2.1.21
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #122689]	caseinase	-	3.4.21.50
[Ref.: #23266]	catalase	+	1.11.1.6
[Ref.: #122689]	catalase	+	1.11.1.6
[Ref.: #23266]	cystine arylamidase	-	3.4.11.3
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #23266]	cytochrome oxidase	+	1.9.3.1
[Ref.: #23266]	DNase	-
[Ref.: #122689]	DNase	-
[Ref.: #23266]	esterase (C 4)	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #23266]	esterase lipase (C 8)	-
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #122689]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #23266]	gelatinase	-
[Ref.: #122689]	gelatinase	+/-
[Ref.: #122689]	lecithinase	-
[Ref.: #23266]	leucine arylamidase	+	3.4.11.1
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #122689]	lipase	-
[Ref.: #23266]	lipase (C 14)	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #23266]	lysine decarboxylase	-	4.1.1.18
[Ref.: #122689]	lysine decarboxylase	-	4.1.1.18
[Ref.: #23266]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #23266]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #122689]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #122689]	oxidase	+
[Ref.: #122689]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #23266]	trypsin	-	3.4.21.4
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #122689]	tryptophan deaminase	-
[Ref.: #122689]	tween esterase	-
[Ref.: #23266]	urease	-	3.5.1.5
[Ref.: #122689]	urease	-	3.5.1.5
[Ref.: #23266]	valine arylamidase	-
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #122689]	2641	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	+	-	-	-	-	-	-	-	+	-	-	-	+	+	-	-	-	-	-	-	-	-	+	-	-	-	+	+	-	-	-	-	-	-	-	+	-	+	+	-	-	-	-	+	+	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #122689]	10976	-	-	+	-	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17376]	Sample type/isolated from	human blood

[Ref.: #57491]	Sample type/isolated from	Human blood
[Ref.: #57491]	Sampling date	1984

[Ref.: #122689]	Sample type/isolated from	Human, Blood
[Ref.: #122689]	Isolation date	1984
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Host Body Product	#Fluids	#Blood

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JQ746427 (>99% sequence identity) for Achromobacter from Microbeatlas

Aquatic Samples	1212
Soil Samples	1429
Animal Samples	2896
Plant Samples	1751
Total Samples	7288

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17376]	Pathogenicity (human)	yes, in single cases
[Ref.: #17376]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #122689]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17376]	Achromobacter sp. LMG 5911 16S ribosomal RNA gene, partial sequence	AY170848	1446	GenBank ENA	217203 tax ID
[Ref.: #124043]	Achromobacter spanius strain LMG 5911 16S ribosomal RNA gene, partial sequence.	MN526952	485	GenBank ENA	217203 tax ID	*
[Ref.: #20218]	Achromobacter spanius strain CCUG 47062 16S ribosomal RNA gene, partial sequence	JQ746427	1309	GenBank ENA	217203 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Achromobacter spanius DSM 23806	GCA_002812705	complete	GenBank ENA	217203 tax ID	*
[Ref.: #66792]	Achromobacter spanius LMG 5911	GCA_902859605	contig	GenBank ENA	217203 tax ID	*
[Ref.: #66792]	Achromobacter spanius strain DSM 23806	217203.10	complete	PATRIC	217203 tax ID	*
[Ref.: #66792]	Achromobacter spanius strain LMG 5911	217203.24	wgs	PATRIC	217203 tax ID	*
[Ref.: #66792]	Achromobacter spanius DSM 23806	2802429335	complete	JGI IMG/M	217203 tax ID	*

[Ref.: #17376]	GC-content	64.9 mol%
[Ref.: #23266]	GC-content	64.9 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %	In training data
	Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Achromobacter spanius DSM 23806 NCBI: GCA_002812705.1
[Ref.: #125438]	gram-positive	gram-positiveⓘ	no	96.932	no
[Ref.: #125438]	anaerobic	anaerobicⓘ	no	98.236	no
[Ref.: #125438]	aerobic	aerobicⓘ	yes	93.27	yes
[Ref.: #125438]	spore-forming	spore-formingⓘ	no	90.889	no
[Ref.: #125438]	thermophile	thermophilicⓘ	no	97.247	no
[Ref.: #125438]	motile2+	flagellatedⓘ	yes	84.834	no

	Model	Trait	Prediction	Confidence in %
	Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Achromobacter spanius strain DSM 23806 PATRIC: 217203.10
[Ref.: #125439]	BacteriaNet	spore_formationⓘ	no	95.7
[Ref.: #125439]	BacteriaNet	motilityⓘ	yes	80.9
[Ref.: #125439]	BacteriaNet	gram_stainⓘ	negative	94.6
[Ref.: #125439]	BacteriaNet	oxygen_toleranceⓘ	obligate aerobe	86.2

Availability in culture collections External links

[Ref.: #17376]

Culture collection no.

CIP 108199, DSM 23806, CCUG 47062, LMG 5911, API 198-2-84

[Ref.: #70004]

SI-ID 785

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Complete genome sequence of Achromobacter spanius type strain DSM 23806(T), a pathogen isolated from human blood.	Li G, Yang L, Zhang T, Guo X, Qin J, Cao Y, Yang Q, You S, Yuan G, Wan X, Luo J, Li Z, Gao L, Liu Y, Jiang K, Zheng J	J Glob Antimicrob Resist	10.1016/j.jgar.2018.05.003	2018	*
Phylogeny	Achromobacter insolitus sp. nov. and Achromobacter spanius sp. nov., from human clinical samples.	Coenye T, Vancanneyt M, Falsen E, Swings J, Vandamme P	Int J Syst Evol Microbiol	10.1099/ijs.0.02698-0	2003	*

References

#17376

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23806

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#23266

Tom Coenye, Marc Vancanneyt, Enevold Falsen, Jean Swings, Peter Vandamme: Achromobacter insolitus sp. nov. and Achromobacter spanius sp. nov., from human clinical samples. IJSEM 53: 1819 - 1824 2003 ( DOI 10.1099/ijs.0.02698-0 , PubMed 14657110 )

#36557 ; Curators of the CIP;
#57491 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 47062

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#70004

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID785.1 )

#122689 Collection of Institut Pasteur ; Curators of the CIP; CIP 108199

#124043

Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

#125438

Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )

#125439

Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

* These data were automatically processed and therefore are not curated

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Achromobacter spanius DSM 23806

Achromobacter spanius strain DSM 23806

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