Achromobacter piechaudii 366-5 is an obligate aerobe, mesophilic, Gram-negative prokaryote that was isolated from pharyngeal swab.
Gram-negative motile rod-shaped obligate aerobe mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Betaproteobacteria |
| Order Burkholderiales |
| Family Alcaligenaceae |
| Genus Achromobacter |
| Species Achromobacter piechaudii |
| Full scientific name Achromobacter piechaudii (Kiredjian et al. 1986) Yabuuchi et al. 1998 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 3912 | NUTRIENT AGAR (DSMZ Medium 1) | Medium recipe at MediaDive | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water | ||
| 36499 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 121824 | CIP Medium 72 | Medium recipe at CIP | |||
| 121824 | CIP Medium 3 | Medium recipe at CIP |
| 67770 | Observationquinones: Q-8 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 17128 ChEBI | adipate | + | assimilation | from API 20NE |
| 68369 | 29016 ChEBI | arginine | - | hydrolysis | from API 20NE |
| 121824 | 16947 ChEBI | citrate | + | carbon source | |
| 68369 | 17634 ChEBI | D-glucose | - | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | fermentation | from API 20NE |
| 68369 | 16899 ChEBI | D-mannitol | - | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | + | assimilation | from API 20NE |
| 121824 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 68369 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20NE |
| 68369 | 24265 ChEBI | gluconate | + | assimilation | from API 20NE |
| 121824 | 606565 ChEBI | hippurate | - | hydrolysis | |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 68369 | 25115 ChEBI | malate | + | assimilation | from API 20NE |
| 121824 | 15792 ChEBI | malonate | - | assimilation | |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 68369 | 59640 ChEBI | N-acetylglucosamine | - | assimilation | from API 20NE |
| 121824 | 17632 ChEBI | nitrate | - | builds gas from | |
| 121824 | 17632 ChEBI | nitrate | + | reduction | |
| 121824 | 17632 ChEBI | nitrate | - | respiration | |
| 68369 | 17632 ChEBI | nitrate | + | reduction | from API 20NE |
| 121824 | 16301 ChEBI | nitrite | - | builds gas from | |
| 121824 | 16301 ChEBI | nitrite | - | reduction | |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 121824 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 121824 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 121824 | amylase | - | ||
| 68369 | arginine dihydrolase | - | 3.5.3.6 | from API 20NE |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 121824 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68369 | beta-glucosidase | - | 3.2.1.21 | from API 20NE |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 121824 | caseinase | - | 3.4.21.50 | |
| 3912 | catalase | + | 1.11.1.6 | |
| 121824 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68369 | cytochrome oxidase | + | 1.9.3.1 | from API 20NE |
| 3912 | cytochrome-c oxidase | + | 1.9.3.1 | |
| 121824 | DNase | - | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 121824 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 121824 | gelatinase | - | ||
| 68369 | gelatinase | - | from API 20NE | |
| 121824 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 121824 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 121824 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 121824 | ornithine decarboxylase | - | 4.1.1.17 | |
| 121824 | oxidase | + | ||
| 121824 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 121824 | protease | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 121824 | tryptophan deaminase | - | ||
| 121824 | tween esterase | - | ||
| 121824 | urease | - | 3.5.1.5 | |
| 68369 | urease | - | 3.5.1.5 | from API 20NE |
| 68382 | valine arylamidase | - | from API zym |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | LMG 1873 assembly for Achromobacter piechaudii LMG 1873 | contig | 72556 | 74.93 | ||||
| 67770 | ASM157124v1 assembly for Achromobacter piechaudii NBRC 102461 | contig | 1216977 | 70.95 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 3912 | Achromobacter piechaudii gene for 16S rRNA, partial sequence | AB010841 | 1321 | 72556 | ||
| 124043 | Achromobacter piechaudii gene for 16S rRNA, partial sequence, strain: NBRC 102461. | AB681803 | 1456 | 72556 | ||
| 124043 | Achromobacter piechaudii strain CCUG 724 16S ribosomal RNA gene, partial sequence. | JQ746425 | 1309 | 72556 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 65 | high performance liquid chromatography (HPLC) |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 98.10 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 94.30 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 68.70 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 94.70 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 95.43 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 98.46 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 90.66 | no |
| 125438 | aerobic | aerobicⓘ | yes | 92.30 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 98.50 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 79.53 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phenotype | Raman-Deuterium Isotope Probing and Metagenomics Reveal the Drought Tolerance of the Soil Microbiome and Its Promotion of Plant Growth. | No JH, Nishu SD, Hong JK, Lyou ES, Kim MS, Wee GN, Lee TK. | mSystems | 10.1128/msystems.01249-21 | 2022 | |
| Phylogeny | Fluorescence in situ hybridization for rapid identification of Achromobacter xylosoxidans and Alcaligenes faecalis recovered from cystic fibrosis patients. | Wellinghausen N, Wirths B, Poppert S. | J Clin Microbiol | 10.1128/jcm.00508-06 | 2006 | |
| Plant Drought Tolerance Enhancement by Trehalose Production of Desiccation-Tolerant Microorganisms. | Vilchez JI, Garcia-Fontana C, Roman-Naranjo D, Gonzalez-Lopez J, Manzanera M. | Front Microbiol | 10.3389/fmicb.2016.01577 | 2016 | ||
| Phylogeny | Application of SmartGene IDNS software to partial 16S rRNA gene sequences for a diverse group of bacteria in a clinical laboratory. | Simmon KE, Croft AC, Petti CA. | J Clin Microbiol | 10.1128/jcm.01364-06 | 2006 | |
| Complete Biodegradation of Diclofenac by New Bacterial Strains: Postulated Pathways and Degrading Enzymes. | Mohamed MSM, Asair AA, Fetyan NAH, Elnagdy SM. | Microorganisms | 10.3390/microorganisms11061445 | 2023 | ||
| Phylogeny | Multilocus sequence analysis of isolates of Achromobacter from patients with cystic fibrosis reveals infecting species other than Achromobacter xylosoxidans. | Ridderberg W, Wang M, Norskov-Lauritsen N. | J Clin Microbiol | 10.1128/jcm.00728-12 | 2012 | |
| Assessing hydrolytic enzyme production ability of bacterial strains from bovine manure as potential biowaste conversion candidates. | Aiysha D, Latif Z. | J Basic Microbiol | 10.1002/jobm.202100294 | 2022 | ||
| Gut microbiome alterations in colitis rats after moxibustion at bilateral Tianshu acupoints. | Qi Q, Liu YN, Lv SY, Wu HG, Zhang LS, Cao Z, Liu HR, Wang XM, Wu LY. | BMC Gastroenterol | 10.1186/s12876-022-02115-1 | 2022 | ||
| Non-native PGPB Consortium Altered the Rhizobacterial Community and Slightly Stimulated the Growth of Winter Oilseed Rape (Brassica napus L.) Under Field Conditions. | Dobrzynski J, Kulkova I, Jakubowska Z, Wrobel B. | Microb Ecol | 10.1007/s00248-024-02471-3 | 2025 | ||
| Bacterial and fungal endophyte communities in healthy and diseased oilseed rape and their potential for biocontrol of Sclerotinia and Phoma disease. | Schmidt CS, Mrnka L, Lovecka P, Frantik T, Fenclova M, Demnerova K, Vosatka M. | Sci Rep | 10.1038/s41598-021-81937-7 | 2021 | ||
| Antimicrobial Activity of Medicinal Plants Correlates with the Proportion of Antagonistic Endophytes. | Egamberdieva D, Wirth S, Behrendt U, Ahmad P, Berg G. | Front Microbiol | 10.3389/fmicb.2017.00199 | 2017 | ||
| Transcriptomic and physiological analyses of Trichoderma citrinoviride HT-1 assisted phytoremediation of Cd contaminated water by Phragmites australis. | Chen D, Wang Y, Li N, Huang Y, Mao Y, Liu X, Du Y, Sun K. | BMC Microbiol | 10.1186/s12866-024-03252-1 | 2024 | ||
| Microbiota Assessment of Fresh-Cut Apples Packaged in Two Different Films. | Madureira J, Goncalves S, Santos-Buelga C, Margaca FMA, Ferreira ICFR, Barros L, Cabo Verde S. | Microorganisms | 10.3390/microorganisms11051157 | 2023 | ||
| In vitro and in vivo activity of cefiderocol against Achromobacter spp. and Burkholderia cepacia complex, including carbapenem-non-susceptible isolates. | Takemura M, Nakamura R, Ota M, Nakai R, Sahm DF, Hackel MA, Yamano Y. | Antimicrob Agents Chemother | 10.1128/aac.00346-23 | 2023 | ||
| Bioaugmentation with Endophytic Bacterium E6S Homologous to Achromobacter piechaudii Enhances Metal Rhizoaccumulation in Host Sedum plumbizincicola. | Ma Y, Zhang C, Oliveira RS, Freitas H, Luo Y. | Front Plant Sci | 10.3389/fpls.2016.00075 | 2016 | ||
| Achromobacter piechaudii bloodstream infection in an immunocompetent host. | Krause ML, Sohail MR, Patel R, Wittich CM. | Am J Case Rep | 10.12659/ajcr.883527 | 2012 | ||
| Metabolism | Isolation and characterization of alkane degrading bacteria from petroleum reservoir waste water in Iran (Kerman and Tehran provenances). | Hassanshahian M, Ahmadinejad M, Tebyanian H, Kariminik A. | Mar Pollut Bull | 10.1016/j.marpolbul.2013.05.002 | 2013 | |
| Enzymology | Achromobacter sp. FB-14 harboring ACC deaminase activity augmented rice growth by upregulating the expression of stress-responsive CIPK genes under salinity stress. | Shahid M, Shah AA, Basit F, Noman M, Zubair M, Ahmed T, Naqqash T, Manzoor I, Maqsood A. | Braz J Microbiol | 10.1007/s42770-019-00199-8 | 2020 | |
| Enzymology | Biochemical and structural elucidation of the L-carnitine degradation pathway of the human pathogen Acinetobacter baumannii. | Piskol F, Lukat P, Kaufhold L, Heger A, Blankenfeldt W, Jahn D, Moser J. | Front Microbiol | 10.3389/fmicb.2024.1446595 | 2024 | |
| In vitro studies on the pharmacological potential, anti-tumor, antimicrobial, and acetylcholinesterase inhibitory activity of marine-derived Bacillus velezensis AG6 exopolysaccharide. | Alharbi MA, Alrehaili AA, Albureikan MOI, Gharib AF, Daghistani H, Bakhuraysah MM, Aloraini GS, Bazuhair MA, Alhuthali HM, Ghareeb A. | RSC Adv | 10.1039/d3ra04009g | 2023 | ||
| Tapping the biosynthetic potential of marine Bacillus licheniformis LHG166, a prolific sulphated exopolysaccharide producer: structural insights, bio-prospecting its antioxidant, antifungal, antibacterial and anti-biofilm potency as a novel anti-infective lead. | Alharbi NK, Azeez ZF, Alhussain HM, Shahlol AMA, Albureikan MOI, Elsehrawy MG, Aloraini GS, El-Nablaway M, Khatrawi EM, Ghareeb A. | Front Microbiol | 10.3389/fmicb.2024.1385493 | 2024 | ||
| Effect of flagella expression on adhesion of Achromobacter piechaudii to chalk surfaces. | Nejidat A, Saadi I, Ronen Z. | J Appl Microbiol | 10.1111/j.1365-2672.2008.03930.x | 2008 | ||
| Screening and identification of microbial strains that secrete an extracellular C-7 xylosidase of taxanes | Wang XH, Zhang C, Yang LL, Li S, Zhang Y, Gomes-Laranjo J. | World J Microbiol Biotechnol | 10.1007/s11274-010-0499-z | 2011 | ||
| Isolation and characterization of halotolerant plant growth promoting rhizobacteria from mangrove region of Sundarbans, India for enhanced crop productivity. | Pallavi, Mishra RK, Sahu PK, Mishra V, Jamal H, Varma A, Tripathi S. | Front Plant Sci | 10.3389/fpls.2023.1122347 | 2023 | ||
| Insect Gut Bacteria Promoting the Growth of Tomato Plants (Solanum lycopersicum L.). | Krawczyk K, Szabelska-Beresewicz A, Przemieniecki SW, Szymanczyk M, Obrepalska-Steplowska A. | Int J Mol Sci | 10.3390/ijms232113548 | 2022 | ||
| Phylogeny | Diverse plant promoting bacterial species differentially improve tomato plant fitness under water stress. | Zampieri E, Franchi E, Giovannini L, Brescia F, Sillo F, Fusini D, Pietrini I, Centritto M, Balestrini R. | Front Plant Sci | 10.3389/fpls.2023.1297090 | 2023 | |
| Metabolism | The Importance of Glycerophospholipid Production to the Mutualist Symbiosis of Trypanosomatids. | de Azevedo-Martins AC, Ocana K, de Souza W, Vasconcelos ATR, Teixeira MMG, Camargo EP, Alves JMP, Motta MCM. | Pathogens | 10.3390/pathogens11010041 | 2021 | |
| Enzymology | Biochemical Characterization of Halotolerant Bacillus safensis PM22 and Its Potential to Enhance Growth of Maize under Salinity Stress. | Azeem MA, Shah FH, Ullah A, Ali K, Jones DA, Khan MEH, Ashraf A. | Plants (Basel) | 10.3390/plants11131721 | 2022 | |
| Phylogeny | Metagenomic analysis of the complex microbial consortium associated with cultures of the oil-rich alga Botryococcus braunii. | Sambles C, Moore K, Lux TM, Jones K, Littlejohn GR, Gouveia JD, Aves SJ, Studholme DJ, Lee R, Love J. | Microbiologyopen | 10.1002/mbo3.482 | 2017 | |
| Metabolism | Evaluation of pyrrolidonyl arylamidase for the identification of nonfermenting Gram-negative rods. | Bombicino KA, Almuzara MN, Famiglietti AM, Vay C. | Diagn Microbiol Infect Dis | 10.1016/j.diagmicrobio.2006.02.012 | 2007 | |
| Bioinoculant mediated regulation of signalling cascades in various stress responses in plants. | Dasgupta D, Paul A, Acharya K, Minkina T, Mandzhieva S, Gorovtsov AV, Chakraborty N, Keswani C. | Heliyon | 10.1016/j.heliyon.2023.e12953 | 2023 | ||
| Pathogenicity | Plant growth-promoting bacteria confer resistance in tomato plants to salt stress. | Mayak S, Tirosh T, Glick BR. | Plant Physiol Biochem | 10.1016/j.plaphy.2004.05.009 | 2004 | |
| Exploring the potential of halotolerant bacteria from coastal regions to mitigate salinity stress in wheat: physiological, molecular, and biochemical insights. | Aizaz M, Lubna, Ahmad W, Khan I, Asaf S, Bilal S, Jan R, Asif S, Waqas M, Khan AL, Kim KM, Al-Harrasi A. | Front Plant Sci | 10.3389/fpls.2023.1224731 | 2023 | ||
| Metabolism | Degradation of 2,4,6-tribromophenol by bacterial cells attached to chalk collected from a contaminated aquifer. | Nejidat A, Saadi I, Ronen Z. | J Appl Microbiol | 10.1111/j.1365-2672.2004.02222.x | 2004 | |
| Wheat Microbiome: Structure, Dynamics, and Role in Improving Performance Under Stress Environments. | Chen J, Sharifi R, Khan MSS, Islam F, Bhat JA, Kui L, Majeed A. | Front Microbiol | 10.3389/fmicb.2021.821546 | 2021 | ||
| Multi-Trait Wheat Rhizobacteria from Calcareous Soil with Biocontrol Activity Promote Plant Growth and Mitigate Salinity Stress. | Venieraki A, Chorianopoulou SN, Katinakis P, Bouranis DL. | Microorganisms | 10.3390/microorganisms9081588 | 2021 | ||
| Phylogeny | Duplex real-time PCR assay for the simultaneous detection of Achromobacter xylosoxidans and Achromobacter spp. | Price EP, Soler Arango V, Kidd TJ, Fraser TA, Nguyen TK, Bell SC, Sarovich DS. | Microb Genom | 10.1099/mgen.0.000406 | 2020 | |
| Recurrent Achromobacter piechaudii bacteremia in a patient with hematological malignancy. | Kay SE, Clark RA, White KL, Peel MM. | J Clin Microbiol | 10.1128/jcm.39.2.808-810.2001 | 2001 | ||
| Plant Growth-Promoting Rhizobacteria Eliminate the Effect of Drought Stress in Plants: A Review. | Ahmad HM, Fiaz S, Hafeez S, Zahra S, Shah AN, Gul B, Aziz O, Mahmood-Ur-Rahman, Fakhar A, Rafique M, Chen Y, Yang SH, Wang X. | Front Plant Sci | 10.3389/fpls.2022.875774 | 2022 | ||
| Enzymology | Isolation and identification of cellulolytic bacteria involved in the degradation of natural cellulosic fibres. | Lednicka D, Mergaert J, Cnockaert MC, Swings J. | Syst Appl Microbiol | 10.1016/s0723-2020(00)80017-x | 2000 | |
| Enzymology | Metagenomic analysis of bloodstream infections in patients with acute leukemia and therapy-induced neutropenia. | Gyarmati P, Kjellander C, Aust C, Song Y, Ohrmalm L, Giske CG. | Sci Rep | 10.1038/srep23532 | 2016 | |
| The Contrivance of Plant Growth Promoting Microbes to Mitigate Climate Change Impact in Agriculture. | Fiodor A, Singh S, Pranaw K. | Microorganisms | 10.3390/microorganisms9091841 | 2021 | ||
| Genetics | Comparative genomic analysis of Mycobacterium iranicum UM_TJL against representative mycobacterial species suggests its environmental origin. | Tan JL, Ngeow YF, Wee WY, Wong GJ, Ng HF, Choo SW. | Sci Rep | 10.1038/srep07169 | 2014 | |
| Halotolerant biofilm-producing rhizobacteria mitigate seawater-induced salt stress and promote growth of tomato. | Haque MM, Biswas MS, Mosharaf MK, Haque MA, Islam MS, Nahar K, Islam MM, Shozib HB, Islam MM, Ferdous-E-Elahi. | Sci Rep | 10.1038/s41598-022-09519-9 | 2022 | ||
| Characterization of a Sequential UV Photolysis-Biodegradation Process for Treatment of Decabrominated Diphenyl Ethers in Sorbent/Water Systems. | Chang YT, Chao WL, Chen HY, Li H, Boyd SA. | Microorganisms | 10.3390/microorganisms8050633 | 2020 | ||
| Phylogeny | A multilocus sequence typing scheme implies population structure and reveals several putative novel Achromobacter species. | Spilker T, Vandamme P, Lipuma JJ. | J Clin Microbiol | 10.1128/jcm.00814-12 | 2012 | |
| Isolation of Rhizosphere Bacteria That Improve Quality and Water Stress Tolerance in Greenhouse Ornamentals. | Nordstedt NP, Jones ML. | Front Plant Sci | 10.3389/fpls.2020.00826 | 2020 | ||
| Achromobacter Infections and Treatment Options. | Isler B, Kidd TJ, Stewart AG, Harris P, Paterson DL. | Antimicrob Agents Chemother | 10.1128/aac.01025-20 | 2020 | ||
| Phylogeny | Experimental and computational investigation of enzyme functional annotations uncovers misannotation in the EC 1.1.3.15 enzyme class. | Rembeza E, Engqvist MKM. | PLoS Comput Biol | 10.1371/journal.pcbi.1009446 | 2021 | |
| Metabolism | Positive effects of bacterial diversity on ecosystem functioning driven by complementarity effects in a bioremediation context. | Venail PA, Vives MJ. | PLoS One | 10.1371/journal.pone.0072561 | 2013 | |
| Biofertilizers function as key player in sustainable agriculture by improving soil fertility, plant tolerance and crop productivity. | Bhardwaj D, Ansari MW, Sahoo RK, Tuteja N. | Microb Cell Fact | 10.1186/1475-2859-13-66 | 2014 | ||
| Metabolism | Functional and structural properties of a novel cellulosome-like multienzyme complex: efficient glycoside hydrolysis of water-insoluble 7-xylosyl-10-deacetylpaclitaxel. | Dou TY, Luan HW, Ge GB, Dong MM, Zou HF, He YQ, Cui P, Wang JY, Hao DC, Yang SL, Yang L. | Sci Rep | 10.1038/srep13768 | 2015 | |
| Genetics | Whole-genome sequencing and comparative analysis of two plant-associated strains of Rhodopseudomonas palustris (PS3 and YSC3). | Lo KJ, Lin SS, Lu CW, Kuo CH, Liu CT. | Sci Rep | 10.1038/s41598-018-31128-8 | 2018 | |
| Enzymology | Why? - Successful Pseudomonas aeruginosa clones with a focus on clone C. | Lee C, Klockgether J, Fischer S, Trcek J, Tummler B, Romling U. | FEMS Microbiol Rev | 10.1093/femsre/fuaa029 | 2020 | |
| Phenotype | Complete genome sequence of the cystic fibrosis pathogen Achromobacter xylosoxidans NH44784-1996 complies with important pathogenic phenotypes. | Jakobsen TH, Hansen MA, Jensen PO, Hansen L, Riber L, Cockburn A, Kolpen M, Ronne Hansen C, Ridderberg W, Eickhardt S, Hansen M, Kerpedjiev P, Alhede M, Qvortrup K, Burmolle M, Moser C, Kuhl M, Ciofu O, Givskov M, Sorensen SJ, Hoiby N, Bjarnsholt T. | PLoS One | 10.1371/journal.pone.0068484 | 2013 | |
| Enzymology | Molecular evolution of urea amidolyase and urea carboxylase in fungi. | Strope PK, Nickerson KW, Harris SD, Moriyama EN. | BMC Evol Biol | 10.1186/1471-2148-11-80 | 2011 | |
| Metabolism | An Endophytic Bacterial Consortium modulates multiple strategies to improve Arsenic Phytoremediation Efficacy in Solanum nigrum. | Mukherjee G, Saha C, Naskar N, Mukherjee A, Mukherjee A, Lahiri S, Majumder AL, Seal A. | Sci Rep | 10.1038/s41598-018-25306-x | 2018 | |
| Metabolism | Symbiotic lactobacilli stimulate gut epithelial proliferation via Nox-mediated generation of reactive oxygen species. | Jones RM, Luo L, Ardita CS, Richardson AN, Kwon YM, Mercante JW, Alam A, Gates CL, Wu H, Swanson PA, Lambeth JD, Denning PW, Neish AS. | EMBO J | 10.1038/emboj.2013.224 | 2013 | |
| Phylogeny | Ribosomal DNA-directed PCR for identification of Achromobacter (Alcaligenes) xylosoxidans recovered from sputum samples from cystic fibrosis patients. | Liu L, Coenye T, Burns JL, Whitby PW, Stull TL, LiPuma JJ. | J Clin Microbiol | 10.1128/jcm.40.4.1210-1213.2002 | 2002 | |
| Phylogeny | Molecular identification of bacteria by total sequence screening: determining the cause of death in ancient human subjects. | Theves C, Senescau A, Vanin S, Keyser C, Ricaut FX, Alekseev AN, Dabernat H, Ludes B, Fabre R, Crubezy E. | PLoS One | 10.1371/journal.pone.0021733 | 2011 | |
| Ehrlichia chaffeensis tandem repeat proteins and Ank200 are type 1 secretion system substrates related to the repeats-in-toxin exoprotein family. | Wakeel A, den Dulk-Ras A, Hooykaas PJ, McBride JW. | Front Cell Infect Microbiol | 10.3389/fcimb.2011.00022 | 2011 | ||
| Metabolism | Involvement of multiple distinct Bordetella receptor proteins in the utilization of iron liberated from transferrin by host catecholamine stress hormones. | Armstrong SK, Brickman TJ, Suhadolc RJ. | Mol Microbiol | 10.1111/j.1365-2958.2012.08032.x | 2012 | |
| Phylogeny | Effects of plant genotype and growth stage on the betaproteobacterial communities associated with different potato cultivars in two fields. | Inceoglu O, Salles JF, van Overbeek L, van Elsas JD. | Appl Environ Microbiol | 10.1128/aem.00040-10 | 2010 | |
| Enzymology | Microbial diversity in the midguts of field and lab-reared populations of the European corn borer Ostrinia nubilalis. | Belda E, Pedrola L, Pereto J, Martinez-Blanch JF, Montagud A, Navarro E, Urchueguia J, Ramon D, Moya A, Porcar M. | PLoS One | 10.1371/journal.pone.0021751 | 2011 | |
| Enzymology | 16S rRNA gene sequencing versus the API 20 NE system and the VITEK 2 ID-GNB card for identification of nonfermenting Gram-negative bacteria in the clinical laboratory. | Bosshard PP, Zbinden R, Abels S, Boddinghaus B, Altwegg M, Bottger EC. | J Clin Microbiol | 10.1128/jcm.44.4.1359-1366.2006 | 2006 | |
| Phylogeny | Emendation of genus Achromobacter and Achromobacter xylosoxidans (Yabuuchi and Yano) and proposal of Achromobacter ruhlandii (Packer and Vishniac) comb. nov., Achromobacter piechaudii (Kiredjian et al.) comb. nov., and Achromobacter xylosoxidans subsp. denitrificans (Ruger and Tan) comb. nov. | Yabuuchi E, Kawamura Y, Kosako Y, Ezaki T | Microbiol Immunol | 10.1111/j.1348-0421.1998.tb02306.x | 1998 |
| #3912 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10342 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #36499 | ; Curators of the CIP; |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68369 | Automatically annotated from API 20NE . |
| #68382 | Automatically annotated from API zym . |
| #121824 | Collection of Institut Pasteur ; Curators of the CIP; CIP 60.75 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
You found an error in BacDive? Please tell us about it!
Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.
Successfully sent
If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive320.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data