Corynebacterium kroppenstedtii DSM 44385 is a facultative anaerobe, Gram-positive bacterium that was isolated from human sputum of a 82-year-old woman with pulmonary disease.
Gram-positive facultative anaerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Mycobacteriales |
| Family Corynebacteriaceae |
| Genus Corynebacterium |
| Species Corynebacterium kroppenstedtii |
| Full scientific name Corynebacterium kroppenstedtii Collins et al. 1998 |
| Synonyms (2) |
| BacDive ID | Other strains from Corynebacterium kroppenstedtii (8) | Type strain |
|---|---|---|
| 3185 | C. kroppenstedtii VA1719_2000, DSM 44799 | |
| 3186 | C. kroppenstedtii BK5689_2003, DSM 44800 | |
| 151641 | C. kroppenstedtii CCUG 44504 | |
| 153339 | C. kroppenstedtii CCUG 49276 | |
| 154272 | C. kroppenstedtii CCUG 52944 | |
| 156328 | C. kroppenstedtii CCUG 61180 | |
| 156929 | C. kroppenstedtii CCUG 67109 | |
| 159405 | C. kroppenstedtii Df-Isolat-1, ID 18-284, Df-Isolat-1, ID 18-284, ... |
| 23182 | Productionno |
| @ref: | 11506 |
| multimedia content: | DSM_44385.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_44385.jpg |
| caption: | Medium 693 37°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 11506 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 19658 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 19658 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 19658 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 19658 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 19658 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 19658 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 23182 | blood agar | ||||
| 38578 | MEDIUM 6 - Columbia agar with 10 % horse blood | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) | |||
| 120503 | CIP Medium 6 | Medium recipe at CIP | |||
| 120503 | CIP Medium 45 | Medium recipe at CIP |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68381 | 40585 ChEBI | alpha-cyclodextrin | - | builds acid from | from API rID32STR |
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68381 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32STR |
| 23182 | 3515 ChEBI | cefuroxime | - | reduction | |
| 23182 | 3745 ChEBI | clindamycin | - | reduction | |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68379 | 16899 ChEBI | D-mannitol | - | fermentation | from API Coryne |
| 68381 | 16899 ChEBI | D-mannitol | - | builds acid from | from API rID32STR |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68379 | 16988 ChEBI | D-ribose | - | fermentation | from API Coryne |
| 68381 | 16988 ChEBI | D-ribose | - | builds acid from | from API rID32STR |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68381 | 16443 ChEBI | D-tagatose | - | builds acid from | from API rID32STR |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 23182 | 65327 ChEBI | D-xylose | - | builds acid from | |
| 68379 | 65327 ChEBI | D-xylose | - | fermentation | from API Coryne |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 23182 | 48923 ChEBI | erythromycin | - | reduction | |
| 23182 | 4853 ChEBI | esculin | + | hydrolysis | |
| 120503 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 23182 | 5291 ChEBI | gelatin | - | hydrolysis | |
| 68379 | 5291 ChEBI | gelatin | - | hydrolysis | from API Coryne |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 23182 | 17234 ChEBI | glucose | + | builds acid from | |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 23182 | 28087 ChEBI | glycogen | - | builds acid from | |
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 68381 | 28087 ChEBI | glycogen | - | builds acid from | from API rID32STR |
| 68371 | 28087 ChEBI | glycogen | + | builds acid from | from API 50CH acid |
| 68381 | 606565 ChEBI | hippurate | - | hydrolysis | from API rID32STR |
| 120503 | 606565 ChEBI | hippurate | + | hydrolysis | |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68381 | 30849 ChEBI | L-arabinose | - | builds acid from | from API rID32STR |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 23182 | 17716 ChEBI | lactose | - | builds acid from | |
| 68379 | 17716 ChEBI | lactose | - | fermentation | from API Coryne |
| 68381 | 17716 ChEBI | lactose | - | builds acid from | from API rID32STR |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 23182 | 17306 ChEBI | maltose | + | builds acid from | |
| 68381 | 17306 ChEBI | maltose | - | builds acid from | from API rID32STR |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 23182 | 29864 ChEBI | mannitol | - | builds acid from | |
| 68381 | 6731 ChEBI | melezitose | - | builds acid from | from API rID32STR |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68381 | 28053 ChEBI | melibiose | - | builds acid from | from API rID32STR |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68381 | 320055 ChEBI | methyl beta-D-glucopyranoside | - | builds acid from | from API rID32STR |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 23182 | 17632 ChEBI | nitrate | - | reduction | |
| 68379 | 17632 ChEBI | nitrate | - | reduction | from API Coryne |
| 120503 | 17632 ChEBI | nitrate | + | reduction | |
| 120503 | 17632 ChEBI | nitrate | + | respiration | |
| 120503 | 16301 ChEBI | nitrite | - | reduction | |
| 23182 | 18208 ChEBI | penicillin g | - | reduction | |
| 68371 | 0 ChEBI | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 0 ChEBI | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid |
| 68381 | 27941 ChEBI | pullulan | - | builds acid from | from API rID32STR |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68381 | 16634 ChEBI | raffinose | - | builds acid from | from API rID32STR |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 23182 | 33942 ChEBI | ribose | - | builds acid from | |
| 68371 | 17814 ChEBI | salicin | + | builds acid from | from API 50CH acid |
| 68381 | 30911 ChEBI | sorbitol | - | builds acid from | from API rID32STR |
| 68371 | 28017 ChEBI | starch | + | builds acid from | from API 50CH acid |
| 23182 | 17992 ChEBI | sucrose | + | builds acid from | |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68381 | 17992 ChEBI | sucrose | - | builds acid from | from API rID32STR |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68381 | 27082 ChEBI | trehalose | + | builds acid from | from API rID32STR |
| 68371 | 32528 ChEBI | turanose | + | builds acid from | from API 50CH acid |
| 68379 | 16199 ChEBI | urea | - | hydrolysis | from API Coryne |
| 68381 | 16199 ChEBI | urea | - | hydrolysis | from API rID32STR |
| 23182 | 28001 ChEBI | vancomycin | - | reduction | |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 23182 | acid phosphatase | - | 3.1.3.2 | |
| 68381 | Alanyl-Phenylalanyl-Proline arylamidase | - | from API rID32STR | |
| 120503 | alcohol dehydrogenase | + | 1.1.1.1 | |
| 23182 | alkaline phosphatase | - | 3.1.3.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68381 | alkaline phosphatase | - | 3.1.3.1 | from API rID32STR |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 23182 | alpha-fucosidase | - | 3.2.1.51 | |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 23182 | alpha-galactosidase | - | 3.2.1.22 | |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68381 | alpha-galactosidase | - | 3.2.1.22 | from API rID32STR |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68379 | alpha-glucosidase | - | 3.2.1.20 | from API Coryne |
| 23182 | alpha-mannosidase | - | 3.2.1.24 | |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 120503 | amylase | - | ||
| 68381 | arginine dihydrolase | - | 3.5.3.6 | from API rID32STR |
| 23182 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 120503 | beta-galactosidase | - | 3.2.1.23 | |
| 68381 | beta-galactosidase | - | 3.2.1.23 | from API rID32STR |
| 68379 | beta-galactosidase | - | 3.2.1.23 | from API Coryne |
| 23182 | beta-glucosidase | - | 3.2.1.21 | |
| 68381 | beta-glucosidase | - | 3.2.1.21 | from API rID32STR |
| 23182 | beta-glucuronidase | - | 3.2.1.31 | |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68381 | beta-glucuronidase | - | 3.2.1.31 | from API rID32STR |
| 68379 | beta-glucuronidase | - | 3.2.1.31 | from API Coryne |
| 68381 | beta-mannosidase | - | 3.2.1.25 | from API rID32STR |
| 120503 | caseinase | + | 3.4.21.50 | |
| 23182 | catalase | + | 1.11.1.6 | |
| 120503 | catalase | + | 1.11.1.6 | |
| 68379 | catalase | + | 1.11.1.6 | from API Coryne |
| 23182 | chymotrypsin | - | 3.4.4.5 | |
| 23182 | cystine arylamidase | - | 3.4.11.3 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 120503 | DNase | - | ||
| 23182 | esterase (C 4) | + | ||
| 23182 | esterase lipase (C 8) | + | ||
| 120503 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 120503 | gelatinase | +/- | ||
| 68379 | gelatinase | - | from API Coryne | |
| 68381 | glycyl tryptophan arylamidase | - | from API rID32STR | |
| 120503 | lecithinase | - | ||
| 23182 | leucine arylamidase | + | 3.4.11.1 | |
| 120503 | lipase | - | ||
| 23182 | lipase (C 14) | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 120503 | lysine decarboxylase | - | 4.1.1.18 | |
| 23182 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | |
| 68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API Coryne |
| 68381 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32STR |
| 120503 | ornithine decarboxylase | - | 4.1.1.17 | |
| 120503 | oxidase | - | ||
| 120503 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 120503 | protease | - | ||
| 23182 | pyrazinamidase | + | 3.5.1.B15 | |
| 23182 | pyrrolidonyl arylamidase | - | 3.4.19.3 | |
| 68381 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32STR |
| 68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API Coryne |
| 23182 | trypsin | - | 3.4.21.4 | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 120503 | tryptophan deaminase | - | ||
| 120503 | tween esterase | - | ||
| 23182 | urease | - | 3.5.1.5 | |
| 120503 | urease | - | 3.5.1.5 | |
| 68381 | urease | - | 3.5.1.5 | from API rID32STR |
| 68379 | urease | - | 3.5.1.5 | from API Coryne |
| 23182 | valine arylamidase | - | ||
| 68382 | valine arylamidase | - | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | vitamin K metabolism | 100 | 5 of 5 | ||
| 66794 | biotin biosynthesis | 100 | 4 of 4 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | cardiolipin biosynthesis | 100 | 7 of 7 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | ethanol fermentation | 100 | 2 of 2 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | aspartate and asparagine metabolism | 100 | 9 of 9 | ||
| 66794 | acetoin degradation | 100 | 3 of 3 | ||
| 66794 | enterobactin biosynthesis | 100 | 3 of 3 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | aerobactin biosynthesis | 100 | 1 of 1 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | denitrification | 100 | 2 of 2 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | phenylalanine metabolism | 92.31 | 12 of 13 | ||
| 66794 | starch degradation | 90 | 9 of 10 | ||
| 66794 | valine metabolism | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | vitamin B12 metabolism | 88.24 | 30 of 34 | ||
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | ||
| 66794 | peptidoglycan biosynthesis | 86.67 | 13 of 15 | ||
| 66794 | citric acid cycle | 85.71 | 12 of 14 | ||
| 66794 | glutamate and glutamine metabolism | 85.71 | 24 of 28 | ||
| 66794 | heme metabolism | 85.71 | 12 of 14 | ||
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | ||
| 66794 | threonine metabolism | 80 | 8 of 10 | ||
| 66794 | lipoate biosynthesis | 80 | 4 of 5 | ||
| 66794 | methylglyoxal degradation | 80 | 4 of 5 | ||
| 66794 | flavin biosynthesis | 80 | 12 of 15 | ||
| 66794 | propionate fermentation | 80 | 8 of 10 | ||
| 66794 | photosynthesis | 78.57 | 11 of 14 | ||
| 66794 | CO2 fixation in Crenarchaeota | 77.78 | 7 of 9 | ||
| 66794 | serine metabolism | 77.78 | 7 of 9 | ||
| 66794 | leucine metabolism | 76.92 | 10 of 13 | ||
| 66794 | vitamin B1 metabolism | 76.92 | 10 of 13 | ||
| 66794 | lactate fermentation | 75 | 3 of 4 | ||
| 66794 | sulfopterin metabolism | 75 | 3 of 4 | ||
| 66794 | butanoate fermentation | 75 | 3 of 4 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | purine metabolism | 73.4 | 69 of 94 | ||
| 66794 | metabolism of disaccharids | 72.73 | 8 of 11 | ||
| 66794 | alanine metabolism | 72.41 | 21 of 29 | ||
| 66794 | propanol degradation | 71.43 | 5 of 7 | ||
| 66794 | pyrimidine metabolism | 71.11 | 32 of 45 | ||
| 66794 | glycolysis | 70.59 | 12 of 17 | ||
| 66794 | Entner Doudoroff pathway | 70 | 7 of 10 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | formaldehyde oxidation | 66.67 | 2 of 3 | ||
| 66794 | cyanate degradation | 66.67 | 2 of 3 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | glycolate and glyoxylate degradation | 66.67 | 4 of 6 | ||
| 66794 | oxidative phosphorylation | 64.84 | 59 of 91 | ||
| 66794 | tetrahydrofolate metabolism | 64.29 | 9 of 14 | ||
| 66794 | proline metabolism | 63.64 | 7 of 11 | ||
| 66794 | dTDPLrhamnose biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | gluconeogenesis | 62.5 | 5 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 62.5 | 5 of 8 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | ketogluconate metabolism | 62.5 | 5 of 8 | ||
| 66794 | urea cycle | 61.54 | 8 of 13 | ||
| 66794 | methionine metabolism | 61.54 | 16 of 26 | ||
| 66794 | NAD metabolism | 61.11 | 11 of 18 | ||
| 66794 | cysteine metabolism | 61.11 | 11 of 18 | ||
| 66794 | metabolism of amino sugars and derivatives | 60 | 3 of 5 | ||
| 66794 | glycine betaine biosynthesis | 60 | 3 of 5 | ||
| 66794 | lipid metabolism | 58.06 | 18 of 31 | ||
| 66794 | tryptophan metabolism | 57.89 | 22 of 38 | ||
| 66794 | mevalonate metabolism | 57.14 | 4 of 7 | ||
| 66794 | glutathione metabolism | 57.14 | 8 of 14 | ||
| 66794 | d-mannose degradation | 55.56 | 5 of 9 | ||
| 66794 | arginine metabolism | 54.17 | 13 of 24 | ||
| 66794 | histidine metabolism | 51.72 | 15 of 29 | ||
| 66794 | aminopropanol phosphate biosynthesis | 50 | 1 of 2 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | quinate degradation | 50 | 1 of 2 | ||
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | ||
| 66794 | lysine metabolism | 47.62 | 20 of 42 | ||
| 66794 | non-pathway related | 47.37 | 18 of 38 | ||
| 66794 | isoprenoid biosynthesis | 46.15 | 12 of 26 | ||
| 66794 | sulfate reduction | 46.15 | 6 of 13 | ||
| 66794 | molybdenum cofactor biosynthesis | 44.44 | 4 of 9 | ||
| 66794 | tyrosine metabolism | 42.86 | 6 of 14 | ||
| 66794 | reductive acetyl coenzyme A pathway | 42.86 | 3 of 7 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 41.67 | 5 of 12 | ||
| 66794 | cellulose degradation | 40 | 2 of 5 | ||
| 66794 | glycogen metabolism | 40 | 2 of 5 | ||
| 66794 | glycine metabolism | 40 | 4 of 10 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | phenylacetate degradation (aerobic) | 40 | 2 of 5 | ||
| 66794 | d-xylose degradation | 36.36 | 4 of 11 | ||
| 66794 | vitamin B6 metabolism | 36.36 | 4 of 11 | ||
| 66794 | lipid A biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | nitrate assimilation | 33.33 | 3 of 9 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | degradation of hexoses | 33.33 | 6 of 18 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | pantothenate biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | degradation of pentoses | 32.14 | 9 of 28 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 30.77 | 4 of 13 | ||
| 66794 | coenzyme M biosynthesis | 30 | 3 of 10 | ||
| 66794 | ubiquinone biosynthesis | 28.57 | 2 of 7 | ||
| 66794 | benzoyl-CoA degradation | 28.57 | 2 of 7 | ||
| 66794 | arachidonic acid metabolism | 27.78 | 5 of 18 | ||
| 66794 | carotenoid biosynthesis | 27.27 | 6 of 22 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | degradation of sugar alcohols | 25 | 4 of 16 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | phenol degradation | 25 | 5 of 20 | ||
| 66794 | CMP-KDO biosynthesis | 25 | 1 of 4 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | 4-hydroxymandelate degradation | 22.22 | 2 of 9 | ||
| 66794 | chlorophyll metabolism | 22.22 | 4 of 18 |
| @ref | Reduction of nitrateNIT | PYZ | PYRA | PAL | beta GUR | beta GAL | alpha GLU | beta NAG | ESC | URE | GEL | Control fermentationControl | GLU | RIB | XYL | MAN | MAL | LAC | SAC | GLYG | CAT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19658 | - | - | - | - | - | - | - | - | - | - | - | not determinedn.d. | - | - | - | - | - | - | - | - | not determinedn.d. | |
| 52936 | - | + | - | + | - | - | - | - | + | - | - | - | + | - | - | - | + | - | + | - | + | |
| 11506 | - | - | - | + | - | - | - | - | +/- | - | - | - | + | - | - | - | - | - | +/- | - | not determinedn.d. |
| @ref | Control | Alkaline phosphatase | Esterase (C 4) | 2-naphtyl caprylateEsterase Lipase (C 8) | Lipase (C 14) | L-leucyl-2-naphthylamideLeucine arylamidase | L-valyl-2-naphthylamideValine arylamidase | L-cystyl-2-naphthylamideCystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19658 | not determinedn.d. | - | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 52936 | - | - | + | + | - | + | - | - | - | - | - | - | - | - | - | - | + | - | - | - | |
| 11506 | - | - | +/- | +/- | - | +/- | - | - | - | - | +/- | +/- | - | - | - | - | +/- | - | - | - | |
| 120503 | - | - | + | + | - | + | - | - | - | - | + | + | - | - | - | - | + | + | - | - |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120503 | not determinedn.d. | - | - | - | - | +/- | - | - | - | - | +/- | + | + | + | - | - | - | - | - | - | - | - | +/- | - | + | + | + | +/- | + | - | - | + | + | - | - | - | + | + | - | - | + | - | - | - | - | - | - | - | - | - |
| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52936 | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| @ref | Sample type | Host species | Sampling date | Geographic location | Country | Country ISO 3 Code | Continent | Isolation date | |
|---|---|---|---|---|---|---|---|---|---|
| 11506 | human sputum of a 82-year-old woman with pulmonary disease | Homo sapiens | Uddevalla | Sweden | SWE | Europe | |||
| 52936 | Human sputum,82-yr-old woman,pulmonary disease | Homo sapiens | 1996-03-11 | Uddevalla | Sweden | SWE | Europe | ||
| 67770 | Sputum of an 82-year-old female with pulmonary disease | Homo sapiens | |||||||
| 120503 | Human, Sputum | Homo sapiens | Uddevalla | Sweden | SWE | Europe | 1996 |
Global distribution of 16S sequence Y10077 (>99% sequence identity) for Corynebacterium kroppenstedtii subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM2314v1 assembly for Corynebacterium kroppenstedtii DSM 44385 | complete | 645127 | 98.86 | ||||
| 124043 | ASM1688936v1 assembly for Corynebacterium kroppenstedtii FDAARGOS_1192 | complete | 161879 | 98.45 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 92.14 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 95.52 | no |
| 125439 | motility | BacteriaNetⓘ | no | 98.27 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.41 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 89.55 | yes |
| 125438 | anaerobic | anaerobicⓘ | no | 94.34 | yes |
| 125438 | aerobic | aerobicⓘ | no | 50.57 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 83.25 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 92.51 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 91.00 | yes |
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| Clinical review and drug sensitivity test of Corynebacterium kroppenstedtii complex isolates in non-lactating patients with severe mastitis. | Liang Z, Zeng Z, Liao Y, Cao Y, Li D, Deng N, Lei Y, Long X, Shen C, Xu R. | Front Microbiol | 10.3389/fmicb.2024.1501204 | 2024 | ||
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| Characterization and antimicrobial susceptibility of one antibiotic-sensitive and one multidrug-resistant Corynebacterium kroppenstedtii strain isolated from patients with granulomatous mastitis. | Fernandez-Natal I, Rodriguez-Lazaro D, Marrodan-Ciordia T, Saez-Nieto JA, Valdezate S, Rodriguez-Pollan H, Tauch A, Soriano F. | New Microbes New Infect | 10.1016/j.nmni.2016.09.006 | 2016 | ||
| Phylogenomic Reappraisal of Fatty Acid Biosynthesis, Mycolic Acid Biosynthesis and Clinical Relevance Among Members of the Genus Corynebacterium. | Dover LG, Thompson AR, Sutcliffe IC, Sangal V. | Front Microbiol | 10.3389/fmicb.2021.802532 | 2021 | ||
| Transcriptional Regulation of the Creatine Utilization Genes of Corynebacterium glutamicum ATCC 14067 by AmtR, a Central Nitrogen Regulator. | Zhang H, Ouyang Z, Zhao N, Han S, Zheng S. | Front Bioeng Biotechnol | 10.3389/fbioe.2022.816628 | 2022 | ||
| Mycolic Acid Biosynthesis Genes in the Genome Sequence of Corynebacterium atypicum DSM 44849. | Tippelt A, Mollmann S, Albersmeier A, Jaenicke S, Ruckert C, Tauch A. | Genome Announc | 10.1128/genomea.00845-14 | 2014 | ||
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| Complete Genome Sequence of Corynebacterium ureicelerivorans DSM 45051, a Lipophilic and Urea-Splitting Isolate from the Blood Culture of a Septicemia Patient. | Tippelt A, Albersmeier A, Brinkrolf K, Ruckert C, Fernandez-Natal I, Soriano F, Tauch A. | Genome Announc | 10.1128/genomea.01211-14 | 2014 | ||
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| Epidemiology and antimicrobial resistance of pathogens in granulomatous mastitis: A multicenter study in Guangdong, China. | Li H, Lin C, Huang M, Luo Y, Zheng M, Liu T, Li S, Liu X, Wu J, Zhou Z, Ye L, Luo M. | iScience | 10.1016/j.isci.2025.113629 | 2025 | ||
| Phylogeny | Clinical characteristics of patients with granulomatous lobular mastitis associated with Corynebacterium parakroppenstedtii infection and drug sensitivity analysis of the isolated strains. | Zeng Y, Wang M, Gao X, Zhang D, Fu N, Zhao W, Huang Q. | Ann Clin Microbiol Antimicrob | 10.1186/s12941-024-00755-7 | 2024 | |
| Clinical features of cystic neutrophil granulomatous mastitis in 62 cases | Wang M, Zhang D, Fu N, Liu M, Zhang H, Feng S, Zeng Y, Zhao W, Cui J, Mansoor K. | Heliyon | 2025 | |||
| Even a single positive blood culture may matter - A case of prosthetic valve infective endocarditis caused by Corynebacterium kroppenstedtii. | Cewers A, Sunnerhagen T, Gilje P, Wannheden F, Blackberg J, Wierup P, Larsson M, Rasmussen M. | IDCases | 10.1016/j.idcr.2024.e02049 | 2024 | ||
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| Phylogeny | Comparative evaluation of Biofire Joint Infection Panel, Sepsitest 16S/18S rDNA PCR, and culture to identify microorganisms in explanted heart valves. | Berinson B, Tanida K, Wolters M, Olearo F, Sinning C, Christner M, Aepfelbacher M, Rohde H. | Microbiol Spectr | 10.1128/spectrum.01263-25 | 2025 | |
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| Reduced Staphylococcus Abundance Characterizes the Lesional Microbiome of Actinic Keratosis Patients after Field-Directed Therapies. | Kehrmann J, Koch F, Zumdick S, Howner A, Best L, Masshofer L, Scharfenberg S, Zeschnigk M, Becker JC, Schadendorf D, Buer J, Roesch A. | Microbiol Spectr | 10.1128/spectrum.04401-22 | 2023 | ||
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| Genetics | Characterization of Spacesuit Associated Microbial Communities and Their Implications for NASA Missions. | Danko D, Malli Mohan GB, Sierra MA, Rucker M, Singh NK, Regberg AB, Bell MS, O'Hara NB, Ounit R, Mason CE, Venkateswaran K. | Front Microbiol | 10.3389/fmicb.2021.608478 | 2021 | |
| Enzymology | Corynebacterium species isolated from patients with mastitis. | Paviour S, Musaad S, Roberts S, Taylor G, Taylor S, Shore K, Lang S, Holland D. | Clin Infect Dis | 10.1086/344463 | 2002 | |
| Periductal Mastitis: An Inflammatory Disease Related to Bacterial Infection and Consequent Immune Responses? | Liu L, Zhou F, Wang P, Yu L, Ma Z, Li Y, Gao D, Zhang Q, Li L, Yu Z. | Mediators Inflamm | 10.1155/2017/5309081 | 2017 | ||
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| Association of Skin Microbiome with the Onset and Recurrence of Pressure Injury in Bedridden Elderly People. | Okamoto S, Ogai K, Mukai K, Sugama J. | Microorganisms | 10.3390/microorganisms9081603 | 2021 | ||
| Enzymology | A clinicopathological review of 34 cases of inflammatory breast disease showing an association between corynebacteria infection and granulomatous mastitis. | Taylor GB, Paviour SD, Musaad S, Jones WO, Holland DJ. | Pathology | 10.1080/00313020307574 | 2003 | |
| Metabolism | Light-inducible carotenoid production controlled by a MarR-type regulator in Corynebacterium glutamicum. | Sumi S, Suzuki Y, Matsuki T, Yamamoto T, Tsuruta Y, Mise K, Kawamura T, Ito Y, Shimada Y, Watanabe E, Watanabe S, Toriyabe M, Takano Shiratori H, Ueda K, Takano H. | Sci Rep | 10.1038/s41598-019-49384-7 | 2019 | |
| Effect of Sample Collection (Manual Expression vs. Pumping) and Skimming on the Microbial Profile of Human Milk Using Culture Techniques and Metataxonomic Analysis. | Rodriguez-Cruz M, Alba C, Aparicio M, Checa MA, Fernandez L, Rodriguez JM. | Microorganisms | 10.3390/microorganisms8091278 | 2020 | ||
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| First report of granulomatous mastitis associated with Sjögren's syndrome. | Letourneux C, Diemunsch P, Korganow AS, Akladios CY, Bellocq JP, Mathelin C. | World J Surg Oncol | 10.1186/1477-7819-11-268 | 2013 | ||
| Production of tetra-methylpyrazine using engineered Corynebacterium glutamicum. | Eng T, Sasaki Y, Herbert RA, Lau A, Trinh J, Chen Y, Mirsiaghi M, Petzold CJ, Mukhopadhyay A. | Metab Eng Commun | 10.1016/j.mec.2019.e00115 | 2020 | ||
| Identification of Emerging Human Mastitis Pathogens by MALDI-TOF and Assessment of Their Antibiotic Resistance Patterns. | Marin M, Arroyo R, Espinosa-Martos I, Fernandez L, Rodriguez JM. | Front Microbiol | 10.3389/fmicb.2017.01258 | 2017 | ||
| Mobile genetic elements from the maternal microbiome shape infant gut microbial assembly and metabolism. | Vatanen T, Jabbar KS, Ruohtula T, Honkanen J, Avila-Pacheco J, Siljander H, Strazar M, Oikarinen S, Hyoty H, Ilonen J, Mitchell CM, Yassour M, Virtanen SM, Clish CB, Plichta DR, Vlamakis H, Knip M, Xavier RJ. | Cell | 10.1016/j.cell.2022.11.023 | 2022 | ||
| Enzymology | Mammary candidiasis: A medical condition without scientific evidence? | Jimenez E, Arroyo R, Cardenas N, Marin M, Serrano P, Fernandez L, Rodriguez JM. | PLoS One | 10.1371/journal.pone.0181071 | 2017 | |
| Phylogeny | Clinical Significance of Commensal Gram-Positive Rods Routinely Isolated from Patient Samples. | Leal SM, Jones M, Gilligan PH. | J Clin Microbiol | 10.1128/jcm.01393-16 | 2016 | |
| Metabolism | Psoriasis and Gut Microbiome-Current State of Art. | Polak K, Bergler-Czop B, Szczepanek M, Wojciechowska K, Fratczak A, Kiss N. | Int J Mol Sci | 10.3390/ijms22094529 | 2021 | |
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| Cohabitation--relationships of corynebacteria and staphylococci on human skin. | Kwaszewska A, Sobis-Glinkowska M, Szewczyk EM. | Folia Microbiol (Praha) | 10.1007/s12223-014-0326-2 | 2014 | ||
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| Analysis of Corynebacterium diphtheriae macrophage interaction: Dispensability of corynomycolic acids for inhibition of phagolysosome maturation and identification of a new gene involved in synthesis of the corynomycolic acid layer. | Ott L, Hacker E, Kunert T, Karrington I, Etschel P, Lang R, Wiesmann V, Wittenberg T, Singh A, Varela C, Bhatt A, Sangal V, Burkovski A. | PLoS One | 10.1371/journal.pone.0180105 | 2017 | ||
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| The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strains. | Soares SC, Silva A, Trost E, Blom J, Ramos R, Carneiro A, Ali A, Santos AR, Pinto AC, Diniz C, Barbosa EG, Dorella FA, Aburjaile F, Rocha FS, Nascimento KK, Guimaraes LC, Almeida S, Hassan SS, Bakhtiar SM, Pereira UP, Abreu VA, Schneider MP, Miyoshi A, Tauch A, Azevedo V. | PLoS One | 10.1371/journal.pone.0053818 | 2013 | ||
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| Phylogeny | Corynebacterium kroppenstedtii sp. nov., a novel corynebacterium that does not contain mycolic acids. | Collins MD, Falsen E, Akervall E, Sjoden B, Alvarez A | Int J Syst Bacteriol | 10.1099/00207713-48-4-1449 | 1998 |
| #11506 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44385 |
| #19658 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #23182 | M. D. COLLINS, E. FALSEN, EVA AKERVALL, BERIT SJÖDEN, A. ALVAREZ: Note: Corynebacterium kroppenstedtii sp. nov., a novel corynebacterium that does not contain mycolic acids. IJSEM 48: 1449 - 1454 1998 ( DOI 10.1099/00207713-48-4-1449 , PubMed 9828448 ) |
| #38578 | ; Curators of the CIP; |
| #52936 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 35717 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68379 | Automatically annotated from API Coryne . |
| #68381 | Automatically annotated from API rID32STR . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #120503 | Collection of Institut Pasteur ; Curators of the CIP; CIP 105744 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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