Achromobacter denitrificans 12, 55B | Type strain | DSM 30026, ATCC 15173, NCTC 8582

Strain identifier

BacDive ID: 318

Type strain:

Species: Achromobacter denitrificans

Strain Designation: 12, 55B

Culture col. no.: DSM 30026, ATCC 15173, NCTC 8582

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #9090]	Domain	Bacteria
[Ref.: #9090]	Phylum	Proteobacteria
[Ref.: #9090]	Class	Betaproteobacteria
[Ref.: #9090]	Order	Burkholderiales
[Ref.: #9090]	Family	Alcaligenaceae
[Ref.: #9090]	Genus	Achromobacter
[Ref.: #9090]	Species	Achromobacter denitrificans
[Ref.: #9090]	Full Scientific Name	Achromobacter denitrificans (Rüger and Tan 1983) Coenye et al. 2003
[Ref.: #9090]	Strain Designation	12, 55B
[Ref.: #9090]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Proteobacteria
[Ref.: #20215]	Class	Betaproteobacteria		Int. J. Syst. Evol. Microbiol. 56:1
[Ref.: #20215]	Family	Alcaligenaceae
[Ref.: #20215]	Genus	Achromobacter	gen. nov. (VP) nom. rev.	Int. J. Syst. Bacteriol. 31:478*
[Ref.: #20215]	Species	Achromobacter denitrificans	comb. nov. (VP)	Int. J. Syst. Evol. Microbiol. 53:1829*
[Ref.: #20215]	Full Scientific Name	Achromobacter denitrificans (Rüger and Tan 1983) Coenye et al. 2003

[Ref.: #20215]	Synonym	Achromobacter xylosoxidans subsp. denitrificans
[Ref.: #20215]	Synonym	Alcaligenes denitrificans
[Ref.: #20215]	Synonym	Alcaligenes denitrificans subsp. denitrificans
[Ref.: #20215]	Synonym	Alcaligenes xylosoxidans subsp. denitrificans

Information on morphological and physiological propertiesMorphology and physiology

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #9090]	3260	+	+/-	+/-	+/-	+	-	+/-	-	-	+	-	-	-	-	-	-	-	-	-	-	+	+	not determinedn.d.	not determinedn.d.	+	not determinedn.d.	not determinedn.d.

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #9090]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1), 30°C

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Culture medium growth

[Ref.: #9090]

Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9090]			growth	30 ̊C

[Ref.: #9090]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #9090]

Sample type/isolated from

soil

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #9090]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter xylosoxidans subsp. denitrificans strain ATCC 15173 Cpn60 (cpn60) gene, partial cds	AY123655	555	32002	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter denitrificans strain ATCC 15173 ATP synthase F1 beta chain (atpD) gene, partial cds	DQ420071	404	32002	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter denitrificans strain ATCC 15173 rnpB gene, partial sequence	DQ420101	266	32002	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter xylosoxidans strain ATCC 15173 DNA-directed RNA polymerase beta subunit (rpoB) gene, partial cds	DQ420116	554	85698	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter xylosoxidans strain ATCC 15173 DNA-directed RNA polymerase beta subunit (rpoB) gene, partial cds	DQ420117	845	85698	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter xylosoxidans strain ATCC 15173 DNA-directed RNA polymerase beta subunit (rpoB) gene, partial cds	DQ420118	900	85698	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter denitrificans strain ATCC 15173 elongation factor Tu (tuf) gene, partial cds	DQ420145	455	32002	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter denitrificans strain ATCC 15173 elongation factor Tu (tuf) gene, partial cds	DQ420146	472	32002	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter denitrificans strain ATCC 15173 N-acyl-D-amino acid amidohydrolase gene, partial cds	JX993347	1467	32002	*
[Ref.: #20218]	INSDC Sequence	A.xylosoxidans 16S ribosomal RNA, complete cds	M22509	1466	85698	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter denitrificans strain CCUG 407 ATP synthase beta-subunit (atpD) gene, partial cds	JQ746037	396	32002	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter denitrificans strain CCUG 407 isocitrate dehydrogenase (icd) gene, partial cds	JQ746114	336	32002	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter denitrificans strain CCUG 407 recombinase A (recA) gene, partial cds	JQ746191	459	32002	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter denitrificans strain CCUG 407 RNA polymerase beta-subunit (rpoB) gene, partial cds	JQ746268	513	32002	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter denitrificans strain CCUG 407 aromatic-amino-acid transferase (tyrB) gene, partial cds	JQ746345	390	32002	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Achromobacter denitrificans strain CCUG 407 16S ribosomal RNA gene, partial sequence	JQ746422	1309	32002	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Achromobacter denitrificans nirK gene for nitrite reductase, partial cds, clone:S4clone68	AB206976	316	32002	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Achromobacter xylosoxidans ssp. denitrificans (strain DSM 30026 T) 5S ribosomal RNA	AJ131589	115	32002	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Alcaligenes xylosoxidans subsp. denitrificans DSM 30026 nirK gene, partial	AJ224904	425	85698	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Achromobacter xylosoxidans subsp. denitrificans partial 16S rRNA gene, strain DSM 30026 (T)	AJ278451	1523	32002	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Alcaligenes denitrificans 16S rRNA gene	Y14907	1489	32002	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Achromobacter denitrificans adkr gene for acetoacetyl-CoA reductase, complete cds, strain: IFO 15125	AB862305	904	32002	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Achromobacter denitrificans nirK gene for nitrite reductase, strain LMG 1231T	AM230821	448	32002	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Achromobacter denitrificans partial qnorB gene for nitric oxide reductase QnorB	AM284322	608	32002	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Achromobacter denitrificans gene for 16S rRNA, partial sequence, strain: NBRC 15125	AB680772	1456	32002	*
[Ref.: #20218]	INSDC Sequence	Sequence 7 from Patent EP2602320	JC428198	1140	1255278	*

Availability in culture collectionsStrain availability

[Ref.: #9090]

Culture collection no.

DSM 30026, ATCC 15173, NCTC 8582

[Ref.: #9090]

Strain history

<- ATCC <- R. Hugh, 12 <- L.R. Fredrich, 55B (Alcaligenes faecalis subsp. faecalis)

[Ref.: #20218]

Associated Passport(s) in StrainInfo

3321, 3317, 3328

References

#9090

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 30026

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

Search for species Achromobacter denitrificans in external resources:
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