Corynebacterium propinquum (DSM 44286, CCUG 33049, Riegel B 65299)

Name: Corynebacterium propinquum (DSM 44286, CCUG 33049, Riegel B 65299)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 3173

Type strain

Strain Designation Riegel B 65299

Culture col. no. DSM 44286 CCUG 33049 Riegel B 65299

NCBI tax ID(s) 43769

Special Collections DSMZ CCUG

Links

Corynebacterium propinquum Riegel B 65299 is a mesophilic prokaryote that was isolated from human respiratory tract.

mesophilic genome sequence

Name and taxonomic classification

SI-ID 50550

CCUG 33049,DSM 44286

@ref 20215

Last LPSN update 2025-12-16 09:47:29

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Corynebacteriaceae

Genus Corynebacterium

Species Corynebacterium propinquum

Full scientific name Corynebacterium propinquum Riegel et al. 1994

BacDive ID	Other strains from **Corynebacterium propinquum** (7)	Type strain
3172	C. propinquum Riegel B 77159, B 77159, JCM 12106, DSM 44285, ... (type strain)
146812	C. propinquum CCUG 32163
146941	C. propinquum CCUG 32509
147206	C. propinquum CCUG 33050
147207	C. propinquum CCUG 33051
151717	C. propinquum CCUG 44703
156456	C. propinquum CCUG 61888

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	91.3
125439		91.7
125438		94
125438	positive	91.817

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
11533	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)		Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535; with strain-specific modifications) Composition: Defibrinated sheep blood 50.0 g/l Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
11533	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	microaerophile	96.6

Spore formation

@ref	Spore formation	Confidence
125439		98.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host	#Human
#Host Body-Site	#Oral cavity and airways

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
11533	human respiratory tract	Strasbourg	France	FRA	Europe
51350	Human respiratory tract	Strasbourg	France	FRA	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
11533	2	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
124043	ASM1672862v1 assembly for Corynebacterium propinquum FDAARGOS_1113	complete	GCA_016728625	43769.23	43769	99.14

Genome browser: GCA_016728625

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Corynebacterium propinquum strain FDAARGOS_1113
PATRIC: 43769.23

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	98.50	no
125439	motility	BacteriaNetⓘ	no	91.70	no
125439	gram_stain	BacteriaNetⓘ	positive	91.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	96.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Corynebacterium propinquum strain FDAARGOS_1113 strain Not applicable
PATRIC: 43769.23

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	91.82	no
125438	anaerobic	anaerobicⓘ	no	96.45	no
125438	spore-forming	spore-formingⓘ	no	84.88	no
125438	aerobic	aerobicⓘ	yes	69.89	no
125438	thermophilic	thermophileⓘ	no	93.36	yes
125438	flagellated	motile2+ⓘ	no	94.00	no

Literature

References

#11533	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44286
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#51350	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 33049
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us