Corynebacterium coyleae (CCUG 38194, LMG 19044, CIP 104919)

Name: Corynebacterium coyleae (CCUG 38194, LMG 19044, CIP 104919)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 3159

Type strain

Culture col. no. CCUG 38194 LMG 19044 CIP 104919 JCM 10381 DSM 44184 4 more

NCBI tax ID(s) 53374

Special Collections DSMZ CCUG JCM CIP Wink compendium Literature strains

History DSMZ <- G. Funke, DMMZ 214, Universität Zürich (Dep. Med. Microbiology) CIP <- 1996, G. Funke, Inst. Med. Mikrobiol., Zürich, Switzerland: strain DMMZ 214 JCM <-- CCUG 38194 <-- G. Funke DMMZ 214. CIP <- 1996, G. Funke, Inst. Med. Mikrobiol., Zürich, Switzerland: strain DMMZ 214

Links

Corynebacterium coyleae CCUG 38194 is an aerobe, Gram-positive bacterium that was isolated from human blood culture.

Gram-positive aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 12970

LMG 19044,CCUG 38194,DSM 44184,ATCC 700219,CCUG 35014,CIP 104919,CCM 4669,JCM 10381

@ref 20215

Last LPSN update 2026-05-29 08:25:38

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Corynebacteriaceae

Genus Corynebacterium

Species Corynebacterium coyleae

Full scientific name Corynebacterium coyleae Funke et al. 1997

BacDive ID	Other strains from **Corynebacterium coyleae** (16)	Type strain
3160	C. coyleae DSM 44185, CCUG 35015, DMMZ 1075, CIP 104920
135844	C. coyleae 689.80, CIP 101831
137814	C. coyleae 144.84, CIP 100718
139067	C. coyleae CIP 104288
145392	C. coyleae CCUG 28353
150823	C. coyleae CCUG 42472
151498	C. coyleae CCUG 44154
153173	C. coyleae CCUG 48637
153645	C. coyleae CCUG 50475
153680	C. coyleae CCUG 50635
154687	C. coyleae CCUG 54854 B
155383	C. coyleae CCUG 57560
155844	C. coyleae CCUG 59464
155902	C. coyleae CCUG 59613
156609	C. coyleae CCUG 63501
172657	C. coyleae CIMB 05-1979, CRBIP17.55

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
23171	positive
118774	positive	rod-shaped
125438			94.5
125439			94.958

Colony morphology

@ref	Colony size	Colony color	Colony shape	Incubation period	Medium used	Hemolysis ability
20014		Sand yellow (1002)		10-14 days	ISP 2
20014		Sand yellow (1002)		10-14 days	ISP 3
20014		Sand yellow (1002)		10-14 days	ISP 4
20014		Sand yellow (1002)		10-14 days	ISP 5
20014		Sand yellow (1002)		10-14 days	ISP 6
20014		Sand yellow (1002)		10-14 days	ISP 7
23171	1 mm	slightly glistening	circular	1 day	sheep blood agar
118774						1

Multicellular morphology

@ref	Forms multicellular complex	Medium name
20014		ISP 2
20014		ISP 3
20014		ISP 4
20014		ISP 5
20014		ISP 6
20014		ISP 7

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
11582	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
20014	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
20014	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
20014	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
20014	ISP 5		Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
20014	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
20014	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes
23171	sheep blood agar
37558	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
118774	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
11582	positive	growth	37
20014	positive	optimum	37
37558	positive	growth	37
54127	positive	growth	37
67770	positive	growth	37
118774	positive	growth	25-41
118774	negative	growth	10
118774	negative	growth	15
118774	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
54127	aerobe
118774	facultative anaerobe

Spore formation

@ref	Spore formation	Confidence
20014
23171
125439		93.115

Halophily

@ref	Salt	Growth	Tested relation	Concentration
118774	NaCl	positive	growth	0-10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
23171	16808 ChEBI	2-dehydro-D-gluconate	-	builds acid from
23171	17426 ChEBI	5-dehydro-D-gluconate	+	builds acid from
23171	27613 ChEBI	amygdalin	-	builds acid from
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
23171	18305 ChEBI	arbutin	-	builds acid from
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
23171		casein	-	hydrolysis
23171	17057 ChEBI	cellobiose	-	builds acid from
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
118774	16947 ChEBI	citrate	-	carbon source
23171	17108 ChEBI	D-arabinose	-	builds acid from
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
23171	18333 ChEBI	D-arabitol	-	builds acid from
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
23171	15824 ChEBI	D-fructose	+	builds acid from
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
23171	28847 ChEBI	D-fucose	-	builds acid from
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
23171	62318 ChEBI	D-lyxose	-	builds acid from
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
23171	16024 ChEBI	D-mannose	+	builds acid from
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
23171	16443 ChEBI	D-tagatose	-	builds acid from
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
23171	17113 ChEBI	erythritol	-	builds acid from
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
23171	4853 ChEBI	esculin	-	hydrolysis
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
118774	4853 ChEBI	esculin	-	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
23171	16813 ChEBI	galactitol	-	builds acid from
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
23171	28260 ChEBI	galactose	-	builds acid from
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
23171	28066 ChEBI	gentiobiose	-	builds acid from
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
23171	24265 ChEBI	gluconate	-	builds acid from
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
23171	17234 ChEBI	glucose	+	builds acid from
23171	17754 ChEBI	glycerol	-	builds acid from
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
23171	28087 ChEBI	glycogen	-	builds acid from
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
118774	606565 ChEBI	hippurate	+	hydrolysis
23171	15443 ChEBI	inulin	-	builds acid from
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
23171	30849 ChEBI	L-arabinose	-	builds acid from
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
23171	18403 ChEBI	L-arabitol	-	builds acid from
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
23171	18287 ChEBI	L-fucose	-	builds acid from
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
23171	17266 ChEBI	L-sorbose	-	builds acid from
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
23171	17716 ChEBI	lactose	-	builds acid from
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
23171	17306 ChEBI	maltose	-	builds acid from
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
23171	29864 ChEBI	mannitol	-	builds acid from
23171	6731 ChEBI	melezitose	-	builds acid from
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
23171	28053 ChEBI	melibiose	-	builds acid from
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
23171	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
23171	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
23171	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
23171	17268 ChEBI	myo-inositol	-	builds acid from
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
23171	506227 ChEBI	N-acetylglucosamine	-	builds acid from
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
23171	17632 ChEBI	nitrate	-	reduction
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
118774	17632 ChEBI	nitrate	-	reduction
118774	17632 ChEBI	nitrate	+	respiration
118774	16301 ChEBI	nitrite	-	reduction
68371	0 ChEBI	Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	0 ChEBI	Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
23171	16634 ChEBI	raffinose	-	builds acid from
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
23171	26546 ChEBI	rhamnose	-	builds acid from
23171	15963 ChEBI	ribitol	-	builds acid from
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
23171	33942 ChEBI	ribose	+	builds acid from
23171	17814 ChEBI	salicin	-	builds acid from
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
23171	30911 ChEBI	sorbitol	-	builds acid from
23171	28017 ChEBI	starch	-	builds acid from
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
23171	17992 ChEBI	sucrose	-	builds acid from
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
23171	27082 ChEBI	trehalose	-	builds acid from
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
23171	32528 ChEBI	turanose	-	builds acid from
68371	32528 ChEBI	turanose	+	builds acid from	from API 50CH acid
23171	18186 ChEBI	tyrosine	-	hydrolysis
23171	16199 ChEBI	urea	-	hydrolysis
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
23171	15318 ChEBI	xanthine	-	hydrolysis
23171	17151 ChEBI	xylitol	-	builds acid from
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid
23171	18222 ChEBI	xylose	-	builds acid from

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
118774	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
118774	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
118774	15688 ChEBI	acetoin	+
118774	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
23171	acid phosphatase	+	3.1.3.2
68382	acid phosphatase	+	3.1.3.2	from API zym
118774	alcohol dehydrogenase	-	1.1.1.1
23171	alkaline phosphatase	+	3.1.3.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
23171	alpha-fucosidase	-	3.2.1.51
68382	alpha-fucosidase	-	3.2.1.51	from API zym
23171	alpha-galactosidase	-	3.2.1.22
68382	alpha-galactosidase	-	3.2.1.22	from API zym
23171	alpha-glucosidase	-	3.2.1.20
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68379	alpha-glucosidase	-	3.2.1.20	from API Coryne
23171	alpha-mannosidase	-	3.2.1.24
68382	alpha-mannosidase	-	3.2.1.24	from API zym
118774	amylase	-
23171	beta-galactosidase	-	3.2.1.23
68382	beta-galactosidase	-	3.2.1.23	from API zym
118774	beta-galactosidase	-	3.2.1.23
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
23171	beta-glucosidase	-	3.2.1.21
68382	beta-glucosidase	-	3.2.1.21	from API zym
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
23171	beta-glucuronidase	-	3.2.1.31
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
118774	caseinase	-	3.4.21.50
23171	catalase	+	1.11.1.6
118774	catalase	-	1.11.1.6
23171	chymotrypsin	-	3.4.4.5
23171	cystine arylamidase	+	3.4.11.3
68382	cystine arylamidase	-	3.4.11.3	from API zym
118774	DNase	-
23171	esterase (C 4)	+
23171	esterase lipase (C 8)	+
68382	esterase lipase (C 8)	+		from API zym
118774	gamma-glutamyltransferase	-	2.3.2.2
118774	gelatinase	-
68379	gelatinase	-		from API Coryne
118774	lecithinase	-
23171	leucine arylamidase	+	3.4.11.1
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
118774	lysine decarboxylase	-	4.1.1.18
23171	N-acetyl-beta-glucosaminidase	-	3.2.1.52
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
118774	ornithine decarboxylase	-	4.1.1.17
118774	oxidase	-
118774	phenylalanine ammonia-lyase	-	4.3.1.24
23171	phosphoamidase	+	3.9.1.1
23171	pyrazinamidase	+	3.5.1.B15
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
23171	pyrrolidonyl arylamidase	+/-	3.4.19.3
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	-	3.4.21.4	from API zym
118774	tryptophan deaminase	-
118774	tween esterase	-
118774	urease	-	3.5.1.5
68379	urease	-	3.5.1.5	from API Coryne
23171	valine arylamidase	-
68382	valine arylamidase	-		from API zym

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
20014	-	-	-	+	-	-	-	-	-	-	-	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
20014	not determinedn.d.	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-
118774	-	+	-	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
118774	not determinedn.d.	-	-	-	-	+	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	+/-	-	-	+	-	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
118774	not determinedn.d.	+	+	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	+	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	+	+	+	-	-	-	-	-	+	-	-	+	+	+	+	+	+	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Medical environment	#Clinic
#Infection	#Patient	#Specimen
#Host	#Human	-

Isolation

@ref	Sample type	Host species	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
11582	human blood culture	Homo sapiens		Zürich	Switzerland	CHE	Europe
23171	human clinical specimens	Homo sapiens
54127	Human blood,30-yr-old male patient	Homo sapiens	1992	Zürich	Switzerland	CHE	Europe
67770	Blood culture (a 30 year-old man infected with the human immunodeficiency virus)	Homo sapiens		Zurich	Switzerland	CHE	Europe
118774	Human, Blood	Homo sapiens		Zurich	Switzerland	CHE	Europe	1992

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
11582	2	Risk group (German classification) According to TRBA 466
20014	2	German classification According to TRBA 466
118774	2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM1904816v1 assembly for Corynebacterium coyleae FDAARGOS 1425	complete	GCA_019048165	53374.54	8120490734	53374	98.86
124043	ASM3040863v1 assembly for Corynebacterium coyleae DSM 44184	complete	GCA_030408635	53374.74		53374	98.52
67770	IMG-taxon 2634166170 annotated assembly for Corynebacterium coyleae DSM 44184	contig	GCA_900105505	53374.4	2634166170	53374	77.02

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Corynebacterium coyleae 16S ribosomal RNA gene, partial sequence	AY438052	420		53374
23171	Corynebacterium coyleae 16S rRNA gene, type strain DSM 44184T	X96497	1483		53374

GC content

@ref	GC-content (mol%)	Method
23171	62.0
67770	62	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1904816v1 assembly for Corynebacterium coyleae FDAARGOS 1425
NCBI: GCA_019048165

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	64.31	no
125439	gram_stain	BacteriaNetⓘ	positive	74.37	no
125439	motility	BacteriaNetⓘ	no	94.96	no
125439	spore_formation	BacteriaNetⓘ	no	93.12	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Corynebacterium coyleae strain FDAARGOS 1425 strain Not applicable
PATRIC: 53374.54

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	87.60	yes
125438	anaerobic	anaerobicⓘ	no	92.20	no
125438	spore-forming	spore-formingⓘ	no	82.52	yes
125438	aerobic	aerobicⓘ	no	55.03	no
125438	thermophilic	thermophileⓘ	no	93.00	yes
125438	flagellated	motile2+ⓘ	no	94.50	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
	Controlled Substance Liquid Waste Management Systems As Potential Reservoirs for Nosocomial Infection in a Pediatric Hospital.	Morales M, Asaban B, Parsons S, Chicella M.	J Pediatr Pharmacol Ther	10.5863/1551-6776-29.4.399	2024
	Genitourinary microbiomes and prostate cancer: a systematic review and meta-analysis of tumorigeneses and cancer characteristics.	Parizi MK, Matsukawa A, Alimohammadi A, Klemm J, Tsuboi I, Fazekas T, Laukhtina E, Chiujdea S, Karakiewicz PI, Shariat SF.	Cent European J Urol	10.5173/ceju.2024.80	2024
	In-depth Microbiological Characterization of Urine From Subjects With Type 2 Diabetes.	Calvigioni M, Biancalana E, Mazzantini D, Celandroni F, Rossi C, Mengozzi A, Ghelardi E, Solini A.	J Clin Endocrinol Metab	10.1210/clinem/dgae389	2024
	Investigation of Bladder Microbiota in Female Patients with Overactive Bladder Syndrome.	Kaya E, Sahinkanat T, Aral M.	Urol Res Pract	10.5152/tud.2025.24040	2025
	Phenotypic and Genotypic Bacterial Virulence and Resistance Profiles in Hidradenitis Suppurativa.	Cucu CI, Giurcaneanu C, Poenaru E, Popa LG, Popa MI, Chifiriuc MC, Lazar V, Holban AM, Gheorghe-Barbu I, Muntean AA, Caracoti CS, Mihai MM.	Int J Mol Sci	10.3390/ijms26083502	2025
	Clinical Characteristics and Follow-Up of Children with Primary Haematogenous Osteomyelitis and Septic Arthritis: Eight Years of Experience from Hungary	Hajosi-Kalcakosz S, Varga E, Ori D, Raskai C, Zsigmond B, Visy B, Fekete F, Horvath A, Dobay O, Szabo B.	Antibiotics (Basel)		2025
	Perinatal factors influencing the earliest establishment of the infant microbiome.	Linehan K, Healy K, Hurley E, O'Shea CA, Ryan CA, Ross RP, Stanton C, Dempsey EM.	Microbiome Res Rep	10.20517/mrr.2024.92	2025
	Endometrial microbiota profile in in-vitro fertilization (IVF) patients by culturomics-based analysis.	Cariati F, Carotenuto C, Bagnulo F, Pacella D, Marrone V, Paolillo R, Catania MR, Di Girolamo R, Conforti A, Strina I, Alviggi C.	Front Endocrinol (Lausanne)	10.3389/fendo.2023.1204729	2023
Pathogenicity	Novel Techniques to Unravel Causative Bacterial Ecological Shifts in Chronic Urinary Tract Infection.	Chieng CCY, Kong Q, Liou NSY, Neira Rey M, Dalby KL, Jones N, Khasriya R, Horsley H.	Pathogens	10.3390/pathogens14030299	2025
	Corynebacterium coyleae as potential urinary tract pathogen.	Sokol-Leszczynska B, Leszczynski P, Lachowicz D, Rostkowska O, Niemczyk M, Piecha T, van Belkum A, Sawicka-Grzelak A, Mlynarczyk G.	Eur J Clin Microbiol Infect Dis	10.1007/s10096-019-03565-4	2019
	Total nephrectomy following Corynebacterium coyleae urinary tract infection.	Barberis CM, Montalvo E, Imas S, Traglia G, Almuzara MN, Rodriguez CH, Famiglietti A, Mazzocchi O, Vay C.	JMM Case Rep	10.1099/jmmcr.0.005149	2018
	Host-microbe computational proteomic landscape in oral cancer revealed key functional and metabolic pathways between Fusobacterium nucleatum and cancer progression.	Munoz-Grez CP, Vidal MA, Rojas TB, Ferrada LE, Zuniga FA, Vera AA, Sanhueza SA, Quiroga RA, Cabrera CD, Antilef BE, Cartes RA, Acevedo MP, Fraga MA, Alarcon-Zapata PF, Hernandez MA, Salas-Burgos AM, Tapia-Belmonte F, Yanez ML, Riquelme EM, Gonzalez WA, Rivera CA, Onate AA, Lamperti LI, Nova-Lamperti E.	Int J Oral Sci	10.1038/s41368-024-00326-8	2025
	The Urobiomes of Adult Women With Various Lower Urinary Tract Symptoms Status Differ: A Re-Analysis.	Joyce C, Halverson T, Gonzalez C, Brubaker L, Wolfe AJ.	Front Cell Infect Microbiol	10.3389/fcimb.2022.860408	2022
	Corynebacterium phoceense - a rare Corynebacterium species isolated from a urine sample.	Barberis CM, Traglia GM, Almuzara MN, Rocha DJPG, Santos CS, Aguiar ERGR, Pacheco LGC, Vay CA.	Access Microbiol	10.1099/acmi.0.000197	2021
Phylogeny	Association of gestational diabetes mellitus with changes in gut microbiota composition at the species level.	Chen F, Gan Y, Li Y, He W, Wu W, Wang K, Li Q.	BMC Microbiol	10.1186/s12866-021-02207-0	2021
Enzymology	The isolation of Corynebacterium coyleae from clinical samples: clinical and microbiological data.	Fernandez-Natal MI, Saez-Nieto JA, Fernandez-Roblas R, Asencio M, Valdezate S, Lapena S, Rodriguez-Pollan RH, Guerra JM, Blanco J, Cachon F, Soriano F.	Eur J Clin Microbiol Infect Dis	10.1007/s10096-007-0414-1	2008
Pathogenicity	High frequency of macrolide resistance mechanisms in clinical isolates of Corynebacterium species.	Ortiz-Perez A, Martin-de-Hijas NZ, Esteban J, Fernandez-Natal MI, Garcia-Cia JI, Fernandez-Roblas R.	Microb Drug Resist	10.1089/mdr.2010.0032	2010
	Vaginal Microbiome-Based Bacterial Signatures for Predicting the Severity of Cervical Intraepithelial Neoplasia.	Lee YH, Kang GU, Jeon SY, Tagele SB, Pham HQ, Kim MS, Ahmad S, Jung DR, Park YJ, Han HS, Shin JH, Chong GO.	Diagnostics (Basel)	10.3390/diagnostics10121013	2020
Pathogenicity	In vitro activity of tigecycline and 10 other antimicrobials against clinical isolates of the genus Corynebacterium.	Fernandez-Roblas R, Adames H, Martin-de-Hijas NZ, Almeida DG, Gadea I, Esteban J.	Int J Antimicrob Agents	10.1016/j.ijantimicag.2008.11.001	2009
	Pancreatic abscess caused by Corynebacterium coyleae mimicking malignant neoplasm.	Taguchi M, Nishikawa S, Matsuoka H, Narita R, Abe S, Fukuda K, Miyamoto H, Taniguchi H, Otsuki M.	Pancreas	10.1097/01.mpa.0000236730.08747.69	2006
Phylogeny	Role of Williamsia and Segniliparus in human infections with the approach taxonomy, cultivation, and identification methods.	Fatahi-Bafghi M.	Ann Clin Microbiol Antimicrob	10.1186/s12941-021-00416-z	2021
	Bacterial networks in Atlantic salmon with Piscirickettsiosis.	Coca Y, Godoy M, Pontigo JP, Caro D, Maracaja-Coutinho V, Arias-Carrasco R, Rodriguez-Cordova L, de Oca MM, Saez-Navarrete C, Burbulis I.	Sci Rep	10.1038/s41598-023-43345-x	2023
	Genital microbiota of women using a 90 day tenofovir or tenofovir and levonorgestrel intravaginal ring in a placebo controlled randomized safety trial in Kenya.	Dabee S, Mugo N, Mudhune V, McLellan-Lemal E, Peacock S, O'Connor S, Njoroge B, Nyagol B, Thurman AR, Ouma E, Ridzon R, Wiener J, Haugen HS, Gasper M, Feng C, Allen SA, Doncel GF, Jaspan HB, Heffron R, Kisumu Combined Ring Study Team.	Sci Rep	10.1038/s41598-022-13475-9	2022
Enzymology	Species identification of corynebacteria by cellular fatty acid analysis.	Van den Velde S, Lagrou K, Desmet K, Wauters G, Verhaegen J.	Diagn Microbiol Infect Dis	10.1016/j.diagmicrobio.2005.08.019	2006
Enzymology	Urine is not sterile: use of enhanced urine culture techniques to detect resident bacterial flora in the adult female bladder.	Hilt EE, McKinley K, Pearce MM, Rosenfeld AB, Zilliox MJ, Mueller ER, Brubaker L, Gai X, Wolfe AJ, Schreckenberger PC.	J Clin Microbiol	10.1128/jcm.02876-13	2014
	Maturation of the oral microbiota during primary teeth eruption: a longitudinal, preliminary study.	Xu H, Tian B, Shi W, Tian J, Wang W, Qin M.	J Oral Microbiol	10.1080/20002297.2022.2051352	2022
Phylogeny	Identification of pathogens from native urine samples by MALDI-TOF/TOF tandem mass spectrometry.	Oros D, Ceprnja M, Zucko J, Cindric M, Hozic A, Skrlin J, Barisic K, Melvan E, Uroic K, Kos B, Starcevic A.	Clin Proteomics	10.1186/s12014-020-09289-4	2020
	Coryneform bacteria in human semen: inter-assay variability in species composition detection and biofilm production ability.	Turk S, Mazzoli S, Stsepetova J, Kuznetsova J, Mandar R.	Microb Ecol Health Dis	10.3402/mehd.v25.22701	2014
Phylogeny	Identification of rare pathogenic bacteria in a clinical microbiology laboratory: impact of matrix-assisted laser desorption ionization-time of flight mass spectrometry.	Seng P, Abat C, Rolain JM, Colson P, Lagier JC, Gouriet F, Fournier PE, Drancourt M, La Scola B, Raoult D.	J Clin Microbiol	10.1128/jcm.00492-13	2013
Phylogeny	Multicenter evaluation of the updated and extended API (RAPID) Coryne database 2.0.	Funke G, Renaud FN, Freney J, Riegel P.	J Clin Microbiol	10.1128/jcm.35.12.3122-3126.1997	1997
	Targeted next-generation sequencing of the 16S-23S rRNA region for culture-independent bacterial identification - increased discrimination of closely related species.	Sabat AJ, van Zanten E, Akkerboom V, Wisselink G, van Slochteren K, de Boer RF, Hendrix R, Friedrich AW, Rossen JWA, Kooistra-Smid AMDM.	Sci Rep	10.1038/s41598-017-03458-6	2017
	The female urinary microbiome: a comparison of women with and without urgency urinary incontinence.	Pearce MM, Hilt EE, Rosenfeld AB, Zilliox MJ, Thomas-White K, Fok C, Kliethermes S, Schreckenberger PC, Brubaker L, Gai X, Wolfe AJ.	mBio	10.1128/mbio.01283-14	2014
Phylogeny	Prevalence of corynebacterial 16S rRNA sequences in patients with bacterial and "nonbacterial" prostatitis.	Tanner MA, Shoskes D, Shahed A, Pace NR.	J Clin Microbiol	10.1128/jcm.37.6.1863-1870.1999	1999
	Description of the genome sequence of Corynebacterium species (Marseille-Q4381).	Boxberger M, Rivoire S, Le Targa L, Cenizo V, La Scola B.	Microbiol Resour Announc	10.1128/mra.00707-24	2025
Phylogeny	Isolation of Corynebacterium tuscaniae sp. nov. from blood cultures of a patient with endocarditis.	Riegel P, Creti R, Mattei R, Nieri A, von Hunolstein C.	J Clin Microbiol	10.1128/jcm.44.2.307-312.2006	2006
Phylogeny	Identification of Arthrobacter oxydans, Arthrobacter luteolus sp. nov., and Arthrobacter albus sp. nov., isolated from human clinical specimens.	Wauters G, Charlier J, Janssens M, Delmee M.	J Clin Microbiol	10.1128/jcm.38.6.2412-2415.2000	2000
Phylogeny	Corynebacterium zhongnanshanii sp. nov. isolated from trachea of Marmota himalayana, Corynebacterium lujinxingii sp. nov. and Corynebacterium wankanglinii sp. nov. from human faeces.	Zhang G, Yang J, Lai XH, Jin D, Lu S, Ren Z, Qin T, Pu J, Ge Y, Cheng Y, Yang C, Lv X, Jiao Y, Huang Y, Xu J	Int J Syst Evol Microbiol	10.1099/ijsem.0.005069	2021
Phylogeny	Corynebacterium coyleae sp. nov., isolated from human clinical specimens.	Funke G, Ramos CP, Collins MD	Int J Syst Bacteriol	10.1099/00207713-47-1-92	1997

References

#11582	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44184
#20014	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#23171	GUIDO FUNKE, CRISTINA PASCUAL RAMOS, MATTHEW D. COLLINS: Corynebacterium coyleae sp. nov., Isolated from Human Clinical Specimens. IJSEM 47: 92 - 96 1997 ( DOI 10.1099/00207713-47-1-92 , PubMed 8995809 )
#37558	; Curators of the CIP;
#54127	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 38194
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#118774	Collection of Institut Pasteur ; Curators of the CIP; CIP 104919
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Corynebacterium coyleae (CCUG 38194, LMG 19044, CIP 104919)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API coryne

API zym

API 50CHac

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_019048165

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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