Corynebacterium urealyticum Armendariz is a microaerophile, Gram-positive, rod-shaped human pathogen that was isolated from bladder stone.
Gram-positive rod-shaped microaerophile human pathogen genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Mycobacteriales |
| Family Corynebacteriaceae |
| Genus Corynebacterium |
| Species Corynebacterium urealyticum |
| Full scientific name Corynebacterium urealyticum Pitcher et al. 1992 |
| @ref: | 2986 |
| multimedia content: | DSM_7109.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_7109.jpg |
| caption: | Medium 693 37°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 2986 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 2986 | TRYPTICASE SOY BROTH AGAR+BLOOD (DSMZ Medium 535a) | Medium recipe at MediaDive | Name: TRYPTICASE SOY BROTH AGAR+BLOOD (DSMZ Medium 535a) Composition: None 50.0 g/l Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water | ||
| 19724 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 19724 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 19724 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 19724 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 19724 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 38133 | MEDIUM 3 - Columbia agar | Columbia agar (39.000 g);distilled water (1000.000 ml) | |||
| 123741 | CIP Medium 6 | Medium recipe at CIP | |||
| 123741 | CIP Medium 3 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 93.075 |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 19724 | NaCl | positive | maximum | 5 % |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 2986 | A31 | A1gamma m-Dpm-direct |
| 67770 | Observationquinones: MK-9(H2) |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | - | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | - | builds acid from | from API 50CH acid |
| 68379 | 17634 ChEBI | D-glucose | - | fermentation | from API Coryne |
| 68371 | 17634 ChEBI | D-glucose | - | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68379 | 16899 ChEBI | D-mannitol | - | fermentation | from API Coryne |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | - | builds acid from | from API 50CH acid |
| 68379 | 16988 ChEBI | D-ribose | - | fermentation | from API Coryne |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68379 | 65327 ChEBI | D-xylose | - | fermentation | from API Coryne |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68379 | 4853 ChEBI | esculin | - | hydrolysis | from API Coryne |
| 123741 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68379 | 5291 ChEBI | gelatin | - | hydrolysis | from API Coryne |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68379 | 17716 ChEBI | lactose | - | fermentation | from API Coryne |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68379 | 17306 ChEBI | maltose | - | fermentation | from API Coryne |
| 68371 | 17306 ChEBI | maltose | - | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API 50CH acid |
| 68379 | 17632 ChEBI | nitrate | - | reduction | from API Coryne |
| 123741 | 17632 ChEBI | nitrate | - | reduction | |
| 123741 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | 0 ChEBI | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 0 ChEBI | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68379 | 17992 ChEBI | sucrose | - | fermentation | from API Coryne |
| 68371 | 17992 ChEBI | sucrose | - | builds acid from | from API 50CH acid |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68379 | 16199 ChEBI | urea | + | hydrolysis | from API Coryne |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 123741 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68379 | alpha-glucosidase | - | 3.2.1.20 | from API Coryne |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 123741 | amylase | - | ||
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 123741 | beta-galactosidase | - | 3.2.1.23 | |
| 68379 | beta-galactosidase | - | 3.2.1.23 | from API Coryne |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68379 | beta-glucosidase | - | 3.2.1.21 | from API Coryne |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68379 | beta-glucuronidase | - | 3.2.1.31 | from API Coryne |
| 123741 | catalase | + | 1.11.1.6 | |
| 68379 | catalase | + | 1.11.1.6 | from API Coryne |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 123741 | gelatinase | - | ||
| 68379 | gelatinase | - | from API Coryne | |
| 68382 | leucine arylamidase | - | 3.4.11.1 | from API zym |
| 123741 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API Coryne |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 123741 | oxidase | - | ||
| 68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API Coryne |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 123741 | urease | + | 3.5.1.5 | |
| 68379 | urease | + | 3.5.1.5 | from API Coryne |
| 68382 | valine arylamidase | - | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | cyanate degradation | 100 | 3 of 3 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | denitrification | 100 | 2 of 2 | ||
| 66794 | threonine metabolism | 90 | 9 of 10 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | valine metabolism | 88.89 | 8 of 9 | ||
| 66794 | aspartate and asparagine metabolism | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | ||
| 66794 | glycolate and glyoxylate degradation | 83.33 | 5 of 6 | ||
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | ||
| 66794 | methylglyoxal degradation | 80 | 4 of 5 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | photosynthesis | 78.57 | 11 of 14 | ||
| 66794 | citric acid cycle | 78.57 | 11 of 14 | ||
| 66794 | molybdenum cofactor biosynthesis | 77.78 | 7 of 9 | ||
| 66794 | vitamin B1 metabolism | 76.92 | 10 of 13 | ||
| 66794 | sulfopterin metabolism | 75 | 3 of 4 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | toluene degradation | 75 | 3 of 4 | ||
| 66794 | proline metabolism | 72.73 | 8 of 11 | ||
| 66794 | NAD metabolism | 72.22 | 13 of 18 | ||
| 66794 | glutamate and glutamine metabolism | 71.43 | 20 of 28 | ||
| 66794 | heme metabolism | 71.43 | 10 of 14 | ||
| 66794 | propanol degradation | 71.43 | 5 of 7 | ||
| 66794 | purine metabolism | 71.28 | 67 of 94 | ||
| 66794 | glycolysis | 70.59 | 12 of 17 | ||
| 66794 | propionate fermentation | 70 | 7 of 10 | ||
| 66794 | phenylalanine metabolism | 69.23 | 9 of 13 | ||
| 66794 | CO2 fixation in Crenarchaeota | 66.67 | 6 of 9 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | UDP-GlcNAc biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | isoprenoid biosynthesis | 65.38 | 17 of 26 | ||
| 66794 | pyrimidine metabolism | 64.44 | 29 of 45 | ||
| 66794 | metabolism of disaccharids | 63.64 | 7 of 11 | ||
| 66794 | dTDPLrhamnose biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | gluconeogenesis | 62.5 | 5 of 8 | ||
| 66794 | ketogluconate metabolism | 62.5 | 5 of 8 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 62.5 | 5 of 8 | ||
| 66794 | alanine metabolism | 62.07 | 18 of 29 | ||
| 66794 | urea cycle | 61.54 | 8 of 13 | ||
| 66794 | leucine metabolism | 61.54 | 8 of 13 | ||
| 66794 | vitamin K metabolism | 60 | 3 of 5 | ||
| 66794 | flavin biosynthesis | 60 | 9 of 15 | ||
| 66794 | oxidative phosphorylation | 58.24 | 53 of 91 | ||
| 66794 | lipid metabolism | 58.06 | 18 of 31 | ||
| 66794 | non-pathway related | 57.89 | 22 of 38 | ||
| 66794 | ubiquinone biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | tetrahydrofolate metabolism | 57.14 | 8 of 14 | ||
| 66794 | d-mannose degradation | 55.56 | 5 of 9 | ||
| 66794 | tryptophan metabolism | 52.63 | 20 of 38 | ||
| 66794 | histidine metabolism | 51.72 | 15 of 29 | ||
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | ||
| 66794 | glycine metabolism | 50 | 5 of 10 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | arginine metabolism | 50 | 12 of 24 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | cysteine metabolism | 50 | 9 of 18 | ||
| 66794 | butanoate fermentation | 50 | 2 of 4 | ||
| 66794 | glutathione metabolism | 50 | 7 of 14 | ||
| 66794 | CMP-KDO biosynthesis | 50 | 2 of 4 | ||
| 66794 | methionine metabolism | 46.15 | 12 of 26 | ||
| 66794 | vitamin B6 metabolism | 45.45 | 5 of 11 | ||
| 66794 | lysine metabolism | 45.24 | 19 of 42 | ||
| 66794 | cardiolipin biosynthesis | 42.86 | 3 of 7 | ||
| 66794 | reductive acetyl coenzyme A pathway | 42.86 | 3 of 7 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 41.67 | 5 of 12 | ||
| 66794 | metabolism of amino sugars and derivatives | 40 | 2 of 5 | ||
| 66794 | glycine betaine biosynthesis | 40 | 2 of 5 | ||
| 66794 | cellulose degradation | 40 | 2 of 5 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | lipoate biosynthesis | 40 | 2 of 5 | ||
| 66794 | glycogen metabolism | 40 | 2 of 5 | ||
| 66794 | sulfate reduction | 38.46 | 5 of 13 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | nitrate assimilation | 33.33 | 3 of 9 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | lipid A biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | androgen and estrogen metabolism | 31.25 | 5 of 16 | ||
| 66794 | Entner Doudoroff pathway | 30 | 3 of 10 | ||
| 66794 | coenzyme M biosynthesis | 30 | 3 of 10 | ||
| 66794 | benzoyl-CoA degradation | 28.57 | 2 of 7 | ||
| 66794 | tyrosine metabolism | 28.57 | 4 of 14 | ||
| 66794 | degradation of hexoses | 27.78 | 5 of 18 | ||
| 66794 | 3-phenylpropionate degradation | 26.67 | 4 of 15 | ||
| 66794 | biotin biosynthesis | 25 | 1 of 4 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | phenol degradation | 25 | 5 of 20 | ||
| 66794 | degradation of sugar alcohols | 25 | 4 of 16 | ||
| 66794 | degradation of pentoses | 25 | 7 of 28 | ||
| 66794 | carnitine metabolism | 25 | 2 of 8 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 23.53 | 4 of 17 | ||
| 66794 | carotenoid biosynthesis | 22.73 | 5 of 22 | ||
| 66794 | 4-hydroxymandelate degradation | 22.22 | 2 of 9 |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123741 | not determinedn.d. | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Infection | #Patient | - | |
| #Host Body-Site | #Urogenital tract | #Bladder | |
| #Host Body Product | #Urogenital tract | #Bladder stone |
Global distribution of 16S sequence X81913 (>99% sequence identity) for Corynebacterium urealyticum subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | 52184_D01 assembly for Corynebacterium urealyticum NCTC12011 | complete | 43771 | 99.01 | ||||
| 124043 | ASM1612797v1 assembly for Corynebacterium urealyticum FDAARGOS_994 | complete | 43771 | 98.85 | ||||
| 66792 | ASM6994v1 assembly for Corynebacterium urealyticum DSM 7109 | complete | 504474 | 98.21 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 95.92 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 94.88 | no |
| 125439 | motility | BacteriaNetⓘ | no | 97.87 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 93.08 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 91.81 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 93.42 | no |
| 125438 | aerobic | aerobicⓘ | yes | 55.81 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 80.56 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.86 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 92.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Antimicrobial Susceptibility and Characterization of Resistance Mechanisms of Corynebacterium urealyticum Clinical Isolates. | Chapartegui-Gonzalez I, Fernandez-Martinez M, Rodriguez-Fernandez A, Rocha DJP, Aguiar ERGR, Pacheco LGC, Ramos-Vivas J, Calvo J, Martinez-Martinez L, Navas J. | Antibiotics (Basel) | 10.3390/antibiotics9070404 | 2020 | |
| Metabolism | Antimicrobial Efficacy of Un-Ionized Ammonia (NH3) against Salmonella Typhimurium in Buffered Solutions with Variable pH, NH3 Concentrations, and Urease-Producing Bacteria. | Gutierrez A, Havelaar AH, Schneider KR. | Microbiol Spectr | 10.1128/spectrum.01850-21 | 2022 | |
| Genetics | Species- and strain-level diversity of Corynebacteria isolated from human facial skin. | Jensen MG, Svraka L, Baez E, Lund M, Poehlein A, Bruggemann H. | BMC Microbiol | 10.1186/s12866-023-03129-9 | 2023 | |
| Pathogenicity | Novel mutations in the QRDR region gyrA gene in multidrug-resistance Corynebacterium spp. isolates from intravenous sites. | Ramos JN, Valadao TB, Baio PVP, Mattos-Guaraldi AL, Vieira VV. | Antonie Van Leeuwenhoek | 10.1007/s10482-019-01353-w | 2020 | |
| Preliminary in Vitro Studies on Corynebacterium urealyticum Pathogenetic Mechanisms, a Possible Candidate for Chronic Idiopathic Prostatitis? | Nicolosi D, Genovese C, Cutuli MA, D'Angeli F, Pietrangelo L, Davinelli S, Petronio Petronio G, Di Marco R. | Microorganisms | 10.3390/microorganisms8040463 | 2020 | ||
| Complete Genome Sequence of the Type Strain Corynebacterium mustelae DSM 45274, Isolated from Various Tissues of a Male Ferret with Lethal Sepsis. | Ruckert C, Eimer J, Winkler A, Tauch A. | Genome Announc | 10.1128/genomea.01012-15 | 2015 | ||
| Complete Genome Sequence of Corynebacterium urealyticum Strain DSM 7111, Isolated from a 9-Year-Old Patient with Alkaline-Encrusted Cystitis. | Guimaraes LC, Soares SC, Albersmeier A, Blom J, Jaenicke S, Azevedo V, Soriano F, Tauch A, Trost E. | Genome Announc | 10.1128/genomea.00264-13 | 2013 | ||
| Enzymology | AAC(3)-XI, a new aminoglycoside 3-N-acetyltransferase from Corynebacterium striatum. | Galimand M, Fishovitz J, Lambert T, Barbe V, Zajicek J, Mobashery S, Courvalin P. | Antimicrob Agents Chemother | 10.1128/aac.01203-15 | 2015 | |
| Genetics | Characterization of the genome of the polyvalent lytic bacteriophage GTE2, which has potential for biocontrol of Gordonia-, Rhodococcus-, and Nocardia-stabilized foams in activated sludge plants. | Petrovski S, Seviour RJ, Tillett D. | Appl Environ Microbiol | 10.1128/aem.00025-11 | 2011 | |
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| Efficacy of a selective and differential medium for isolating Corynebacterium urealyticum from urine specimens. | Garcia-Bravo M, Aguado JM, Morales JM, Noriega AR. | Clin Microbiol Infect | 10.1111/j.1469-0691.1997.tb00307.x | 1997 | ||
| Phylogeny Trumps Chemotaxonomy: A Case Study Involving Turicella otitidis. | Baek I, Kim M, Lee I, Na SI, Goodfellow M, Chun J. | Front Microbiol | 10.3389/fmicb.2018.00834 | 2018 | ||
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| A necrotic soft-tissue lesion due to Corynebacterium urealyticum in a neutropenic child. | Saavedra J, Rodriguez JN, Fernandez-Jurado A, Vega MD, Pascual L, Prados D. | Clin Infect Dis | 10.1093/clinids/22.5.851 | 1996 | ||
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| Evaluation of an Image Analysis Device (APAS) for Screening Urine Cultures. | Glasson J, Hill R, Summerford M, Giglio S. | J Clin Microbiol | 10.1128/jcm.02365-15 | 2016 | ||
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| Pathogenicity | In-vitro activity of psychiatric drugs against Corynebacterium urealyticum (Corynebacterium group D2). | Munoz-Bellido JL, Munoz-Criado S, Garcia-Rodriguez JA. | J Antimicrob Chemother | 10.1093/jac/37.5.1005 | 1996 | |
| Phylogeny | rRNA gene RFLP as an identification tool for Corynebacterium species. | Bjorkroth J, Korkeala H, Funke G. | Int J Syst Bacteriol | 10.1099/00207713-49-3-983 | 1999 | |
| Encrusted pyelitis of native kidneys. | Hertig A, Duvic C, Chretien Y, Jungers P, Grunfeld JP, Rieu P. | J Am Soc Nephrol | 10.1681/asn.v1161138 | 2000 | ||
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| Incidence and characteristics of urinary tract infections caused by Corynebacterium urealyticum (Corynebacterium group D2). | Nebreda-Mayoral T, Munoz-Bellido JL, Garcia-Rodriguez JA. | Eur J Clin Microbiol Infect Dis | 10.1007/bf01971313 | 1994 | ||
| Enzymology | Corynebacterium urealyticum (CDC Group D2) associated with staghorn calculus: treatment by percutaneous debulking and chemolysis. | Nadler RB, Hoffman TA, McClennan BL, Clayman RV. | J Endourol | 10.1089/end.1996.10.31 | 1996 | |
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| Non-urinary tract infections caused by multiply antibiotic-resistant Corynebacterium urealyticum. | Soriano F, Ponte C, Ruiz P, Zapardiel J. | Clin Infect Dis | 10.1093/clinids/17.5.890 | 1993 | ||
| Adherence of Corynebacterium urealyticum (CDC group D2) and Corynebacterium jeikeium to intravascular and urinary catheters. | Soriano F, Ponte C, Galiano MJ. | Eur J Clin Microbiol Infect Dis | 10.1007/bf01967441 | 1993 | ||
| Numerical analysis of fatty and mycolic acid profiles of Corynebacterium urealyticum and other related corynebacteria. | Herrera-Alcaraz E, Valero-Guillen P, Martin-Luengo F, Canteras-Jordana M. | Microbiologia | 1993 | |||
| Enzymology | Urinary tract infection with Corynebacterium urealyticum in South Africa. | Walkden D, Klugman KP, Vally S, Naidoo P. | Eur J Clin Microbiol Infect Dis | 10.1007/bf01997051 | 1993 | |
| Enzymology | Prospective study of catalase-positive coryneform organisms in clinical specimens: identification, clinical relevance, and antibiotic susceptibility. | Lagrou K, Verhaegen J, Janssens M, Wauters G, Verbist L. | Diagn Microbiol Infect Dis | 10.1016/s0732-8893(97)00193-4 | 1998 | |
| Cultivation | Use of selective media for isolating Corynebacterium urealyticum from urine specimens. | Soriano F, Zapardiel J, Ponte C. | J Clin Microbiol | 10.1128/jcm.32.10.2630-2631.1994 | 1994 | |
| Pathogenicity | In-vitro activity of levofloxacin, ofloxacin and D-ofloxacin against coryneform bacteria and Listeria monocytogenes. | Martinez-Martinez L, Pascual A, Suarez AI, Perea EJ. | J Antimicrob Chemother | 10.1093/jac/43.suppl_3.27 | 1999 | |
| Bacterial contamination of dental unit waterlines. | Szymanska J, Sitkowska J. | Environ Monit Assess | 10.1007/s10661-012-2812-9 | 2013 | ||
| Pathogenicity | Treat Me Well or Will Resist: Uptake of Mobile Genetic Elements Determine the Resistome of Corynebacterium striatum. | Leyton B, Ramos JN, Baio PVP, Veras JFC, Souza C, Burkovski A, Mattos-Guaraldi AL, Vieira VV, Abanto Marin M. | Int J Mol Sci | 10.3390/ijms22147499 | 2021 | |
| Pathogenicity | [Activity of ethambutol, isoniazid and rifampicin on Corynebacterium urealyticum and Corynebacterium jeikeium]. | Benichou P, Boyer G, Jean-Pierre H, Darbas H, Riviere M. | Pathol Biol (Paris) | 1992 | ||
| Enzymology | A case of urinary tract infection caused by Corynebacterium urealyticum and coryneform group F1. | Soriano F, Ponte C. | Eur J Clin Microbiol Infect Dis | 10.1007/bf01961671 | 1992 | |
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| [Bacteriological and clinical aspects of corynebacterium]. | Riegel P. | Ann Biol Clin (Paris) | 1998 | |||
| Encrusted pyelitis and cystitis by Corynebacterium urealyticum (CDC group D2): a new and threatening complication following renal transplant. | Aguado JM, Morales JM, Salto E, Lumbreras C, Lizasoain M, Diaz-Gonzalez R, Martinez MA, Andres A, Praga M, Noriega AR. | Transplantation | 10.1097/00007890-199309000-00023 | 1993 | ||
| Endocervical and vaginal microbiota in South African adolescents with asymptomatic Chlamydia trachomatis infection. | Balle C, Lennard K, Dabee S, Barnabas SL, Jaumdally SZ, Gasper MA, Maseko V, Mbulawa ZZA, Williamson AL, Bekker LG, Lewis DA, Passmore JS, Jaspan HB. | Sci Rep | 10.1038/s41598-018-29320-x | 2018 | ||
| Enzymology | Culture of Urine Specimens by Use of chromID CPS Elite Medium Can Expedite Escherichia coli Identification and Reduce Hands-On Time in the Clinical Laboratory. | Yarbrough ML, Wallace MA, Marshall C, Mathias E, Burnham CA. | J Clin Microbiol | 10.1128/jcm.01376-16 | 2016 | |
| Phylogeny | Corynebacterium group D2 ("Corynebacterium urealyticum") constitutes a new genomic species. | Riegel P, Grimont PA, De Briel D, Ageron E, Jehl F, Pelegrin M, Monteil H, Minck R. | Res Microbiol | 10.1016/0923-2508(92)90022-g | 1992 | |
| High throughput genomic sequencing of bioaerosols in broiler chicken production facilities. | O'Brien KM, Chimenti MS, Farnell M, Tabler T, Bair T, Bray JL, Nonnenmann MW. | Microb Biotechnol | 10.1111/1751-7915.12380 | 2016 | ||
| Modulation of Atlantic salmon (Salmo salar) gut microbiota composition and predicted metabolic capacity by feeding diets with processed black soldier fly (Hermetia illucens) larvae meals and fractions. | Weththasinghe P, Rocha SDC, Oyas O, Lagos L, Hansen JO, Mydland LT, Overland M. | Anim Microbiome | 10.1186/s42523-021-00161-w | 2022 | ||
| Metabolism | Obesity and ethnicity alter gene expression in skin. | Walker JM, Garcet S, Aleman JO, Mason CE, Danko D, Butler D, Zuffa S, Swann JR, Krueger J, Breslow JL, Holt PR. | Sci Rep | 10.1038/s41598-020-70244-2 | 2020 | |
| Pathogenicity | Problems in minimum inhibitory concentration determinations in coryneform organisms. Comparison of an agar dilution and the Etest. | Zapardiel J, Nieto E, Gegundez MI, Gadea I, Soriano F. | Diagn Microbiol Infect Dis | 10.1016/0732-8893(94)90062-0 | 1994 | |
| Enzymology | Prevalence of Corynebacterium urealyticum in urine specimens collected at a university-affiliated medical center. | Ryan M, Murray PR. | J Clin Microbiol | 10.1128/jcm.32.5.1395-1396.1994 | 1994 | |
| Enzymology | Recurrent infection stones with apparently negative cultures. The case for blind antibacterial treatment. | Rose GA, Rosenbaum TP. | Br J Urol | 10.1111/j.1464-410x.1992.tb15519.x | 1992 | |
| Cohabitation--relationships of corynebacteria and staphylococci on human skin. | Kwaszewska A, Sobis-Glinkowska M, Szewczyk EM. | Folia Microbiol (Praha) | 10.1007/s12223-014-0326-2 | 2014 | ||
| Approach to a patient with urosepsis. | Kalra OP, Raizada A. | J Glob Infect Dis | 10.4103/0974-777x.52984 | 2009 | ||
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| Initial presentations and final outcomes of primary pyogenic liver abscess: a cross-sectional study. | Chen CH, Wu SS, Chang HC, Chang YJ. | BMC Gastroenterol | 10.1186/1471-230x-14-133 | 2014 | ||
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| An Update on Novel Taxa and Revised Taxonomic Status of Bacteria Isolated from Domestic Animals Described in 2018 to 2021. | Munson E, Lawhon SD, Burbick CR, Zapp A, Villaflor M, Thelen E. | J Clin Microbiol | 10.1128/jcm.00281-22 | 2023 | ||
| Enzymology | Purification, characterization and amino acid content of cholesterol oxidase produced by Streptomyces aegyptia NEAE 102. | El-Naggar NE, Deraz SF, Soliman HM, El-Deeb NM, El-Shweihy NM. | BMC Microbiol | 10.1186/s12866-017-0988-4 | 2017 | |
| Prospective study of urinary tract infection surveillance after kidney transplantation. | Rivera-Sanchez R, Delgado-Ochoa D, Flores-Paz RR, Garcia-Jimenez EE, Espinosa-Hernandez R, Bazan-Borges AA, Arriaga-Alba M. | BMC Infect Dis | 10.1186/1471-2334-10-245 | 2010 | ||
| Is the sequence-specific binding of aminoacyl-tRNAs by EF-Tu universal among bacteria? | Schrader JM, Uhlenbeck OC. | Nucleic Acids Res | 10.1093/nar/gkr641 | 2011 | ||
| Genetics | Respiratory infection by Corynebacterium striatum: epidemiological and clinical determinants. | Renom F, Gomila M, Garau M, Gallegos MD, Guerrero D, Lalucat J, Soriano JB. | New Microbes New Infect | 10.1002/nmi2.48 | 2014 | |
| Enzymology | Real-time PCR for diagnosing Helicobacter pylori infection in patients with upper gastrointestinal bleeding: comparison with other classical diagnostic methods. | Saez J, Belda S, Santibanez M, Rodriguez JC, Sola-Vera J, Galiana A, Ruiz-Garcia M, Brotons A, Lopez-Girona E, Girona E, Sillero C, Royo G. | J Clin Microbiol | 10.1128/jcm.01205-12 | 2012 | |
| Phylogeny | Evaluation of the Andromas matrix-assisted laser desorption ionization-time of flight mass spectrometry system for identification of aerobically growing Gram-positive bacilli. | Farfour E, Leto J, Barritault M, Barberis C, Meyer J, Dauphin B, Le Guern AS, Lefleche A, Badell E, Guiso N, Leclercq A, Le Monnier A, Lecuit M, Rodriguez-Nava V, Bergeron E, Raymond J, Vimont S, Bille E, Carbonnelle E, Guet-Revillet H, Lecuyer H, Beretti JL, Vay C, Berche P, Ferroni A, Nassif X, Join-Lambert O. | J Clin Microbiol | 10.1128/jcm.00368-12 | 2012 | |
| Genetics | Characterization of Bacterial Community Dynamics of the Human Mouth Throughout Decomposition via Metagenomic, Metatranscriptomic, and Culturing Techniques. | Ashe EC, Comeau AM, Zejdlik K, O'Connell SP. | Front Microbiol | 10.3389/fmicb.2021.689493 | 2021 | |
| Phylogeny | Identification of clinical coryneform bacterial isolates: comparison of biochemical methods and sequence analysis of 16S rRNA and rpoB genes. | Adderson EE, Boudreaux JW, Cummings JR, Pounds S, Wilson DA, Procop GW, Hayden RT. | J Clin Microbiol | 10.1128/jcm.01849-07 | 2008 | |
| Pathogenicity | Drug-gut microbiota interactions: implications for neuropharmacology. | Walsh J, Griffin BT, Clarke G, Hyland NP. | Br J Pharmacol | 10.1111/bph.14366 | 2018 | |
| Pyogenic liver abscess: an audit of 10 years' experience. | Pang TC, Fung T, Samra J, Hugh TJ, Smith RC. | World J Gastroenterol | 10.3748/wjg.v17.i12.1622 | 2011 | ||
| Phylogeny | Evaluation of broiler litter with reference to the microbial composition as assessed by using 16S rRNA and functional gene markers. | Lu J, Sanchez S, Hofacre C, Maurer JJ, Harmon BG, Lee MD. | Appl Environ Microbiol | 10.1128/aem.69.2.901-908.2003 | 2003 | |
| Phylogeny | Culture-independent identification of pathogenic bacteria and polymicrobial infections in the genitourinary tract of renal transplant recipients. | Domann E, Hong G, Imirzalioglu C, Turschner S, Kuhle J, Watzel C, Hain T, Hossain H, Chakraborty T. | J Clin Microbiol | 10.1128/jcm.41.12.5500-5510.2003 | 2003 | |
| Pathogenicity | Antimicrobial susceptibilities of Corynebacterium species and other non-spore-forming gram-positive bacilli to 18 antimicrobial agents. | Soriano F, Zapardiel J, Nieto E. | Antimicrob Agents Chemother | 10.1128/aac.39.1.208 | 1995 | |
| Phylogeny | Culture-dependent and -independent investigations of microbial diversity on urinary catheters. | Xu Y, Moser C, Al-Soud WA, Sorensen S, Hoiby N, Nielsen PH, Thomsen TR. | J Clin Microbiol | 10.1128/jcm.01237-12 | 2012 | |
| Stress | Functional consequences of B-repeat sequence variation in the staphylococcal biofilm protein Aap: deciphering the assembly code. | Shelton CL, Conrady DG, Herr AB. | Biochem J | 10.1042/bcj20160675 | 2017 | |
| Pathogenicity | In vitro susceptibilities of aerobic and facultative non-spore-forming gram-positive bacilli to HMR 3647 (RU 66647) and 14 other antimicrobials. | Soriano F, Fernandez-Roblas R, Calvo R, Garcia-Calvo G. | Antimicrob Agents Chemother | 10.1128/aac.42.5.1028 | 1998 | |
| Enzymology | Genotypic differences between strains of the opportunistic pathogen Corynebacterium bovis isolated from humans, cows, and rodents. | Cheleuitte-Nieves C, Gulvik CA, McQuiston JR, Humrighouse BW, Bell ME, Villarma A, Fischetti VA, Westblade LF, Lipman NS. | PLoS One | 10.1371/journal.pone.0209231 | 2018 | |
| Metabolism | In vitro and in vivo study of stone formation by Corynebacterium group D2 (Corynebacterium urealyticum). | Soriano F, Ponte C, Santamaria M, Castilla C, Fernandez Roblas R. | J Clin Microbiol | 10.1128/jcm.23.4.691-694.1986 | 1986 | |
| Genetics | Whole metagenome profiles of particulates collected from the International Space Station. | Be NA, Avila-Herrera A, Allen JE, Singh N, Checinska Sielaff A, Jaing C, Venkateswaran K. | Microbiome | 10.1186/s40168-017-0292-4 | 2017 | |
| Enzymology | A framework for classification of prokaryotic protein kinases. | Tyagi N, Anamika K, Srinivasan N. | PLoS One | 10.1371/journal.pone.0010608 | 2010 | |
| Pathogenicity | Bacteriology of moderate-to-severe diabetic foot infections and in vitro activity of antimicrobial agents. | Citron DM, Goldstein EJ, Merriam CV, Lipsky BA, Abramson MA. | J Clin Microbiol | 10.1128/jcm.00551-07 | 2007 | |
| Phylogeny | Evaluation of the RapID CB plus system for identification of coryneform bacteria and Listeria spp. | Funke G, Peters K, Aravena-Roman M. | J Clin Microbiol | 10.1128/jcm.36.9.2439-2442.1998 | 1998 | |
| Pathogenicity | Molecular evaluation of antibiotic susceptibility: Tropheryma whipplei paradigm. | Masselot F, Boulos A, Maurin M, Rolain JM, Raoult D. | Antimicrob Agents Chemother | 10.1128/aac.47.5.1658-1664.2003 | 2003 | |
| Enzymology | Computational approach involving use of the internal transcribed spacer 1 region for identification of Mycobacterium species. | Mohamed AM, Kuyper DJ, Iwen PC, Ali HH, Bastola DR, Hinrichs SH. | J Clin Microbiol | 10.1128/jcm.43.8.3811-3817.2005 | 2005 | |
| The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strains. | Soares SC, Silva A, Trost E, Blom J, Ramos R, Carneiro A, Ali A, Santos AR, Pinto AC, Diniz C, Barbosa EG, Dorella FA, Aburjaile F, Rocha FS, Nascimento KK, Guimaraes LC, Almeida S, Hassan SS, Bakhtiar SM, Pereira UP, Abreu VA, Schneider MP, Miyoshi A, Tauch A, Azevedo V. | PLoS One | 10.1371/journal.pone.0053818 | 2013 | ||
| Metabolism | Identification and functional characterization of arylamine N-acetyltransferases in eubacteria: evidence for highly selective acetylation of 5-aminosalicylic acid. | Delomenie C, Fouix S, Longuemaux S, Brahimi N, Bizet C, Picard B, Denamur E, Dupret JM. | J Bacteriol | 10.1128/jb.183.11.3417-3427.2001 | 2001 | |
| Metabolism | Corynebacterium jeikeium jk0268 constitutes for the 40 amino acid long PorACj, which forms a homooligomeric and anion-selective cell wall channel. | Abdali N, Barth E, Norouzy A, Schulz R, Nau WM, Kleinekathofer U, Tauch A, Benz R. | PLoS One | 10.1371/journal.pone.0075651 | 2013 | |
| Metabolism | A Mycobacterium strain with extended capacities for degradation of gasoline hydrocarbons. | Solano-Serena F, Marchal R, Casaregola S, Vasnier C, Lebeault JM, Vandecasteele JP. | Appl Environ Microbiol | 10.1128/aem.66.6.2392-2399.2000 | 2000 | |
| A novel immunity system for bacterial nucleic acid degrading toxins and its recruitment in various eukaryotic and DNA viral systems. | Zhang D, Iyer LM, Aravind L. | Nucleic Acids Res | 10.1093/nar/gkr036 | 2011 | ||
| The IclR-type transcriptional repressor LtbR regulates the expression of leucine and tryptophan biosynthesis genes in the amino acid producer Corynebacterium glutamicum. | Brune I, Jochmann N, Brinkrolf K, Huser AT, Gerstmeir R, Eikmanns BJ, Kalinowski J, Puhler A, Tauch A. | J Bacteriol | 10.1128/jb.01876-06 | 2007 | ||
| Genetics | Genome-Based Taxonomic Classification of the Phylum Actinobacteria. | Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M. | Front Microbiol | 10.3389/fmicb.2018.02007 | 2018 | |
| Metabolism | Identification and characterization of smallest pore-forming protein in the cell wall of pathogenic Corynebacterium urealyticum DSM 7109. | Abdali N, Younas F, Mafakheri S, Pothula KR, Kleinekathofer U, Tauch A, Benz R | BMC Biochem | 10.1186/s12858-018-0093-9 | 2018 | |
| Genetics | Genome informatics and vaccine targets in Corynebacterium urealyticum using two whole genomes, comparative genomics, and reverse vaccinology. | Guimaraes L, Soares S, Trost E, Blom J, Ramos R, Silva A, Barh D, Azevedo V | BMC Genomics | 10.1186/1471-2164-16-S5-S7 | 2015 | |
| Genetics | The lifestyle of Corynebacterium urealyticum derived from its complete genome sequence established by pyrosequencing. | Tauch A, Trost E, Tilker A, Ludewig U, Schneiker S, Goesmann A, Arnold W, Bekel T, Brinkrolf K, Brune I, Gotker S, Kalinowski J, Kamp PB, Lobo FP, Viehoever P, Weisshaar B, Soriano F, Droge M, Puhler A | J Biotechnol | 10.1016/j.jbiotec.2008.02.009 | 2008 | |
| Genetics | Genome sequence and description of Corynebacterium ihumii sp. nov. | Padmanabhan R, Dubourg G, Lagier JC, Couderc C, Michelle C, Raoult D, Fournier PE. | Stand Genomic Sci | 10.4056/sigs.5149006 | 2014 | |
| Phylogeny | Corynebacterium urogenitale sp. nov. isolated from the genital tract of a cow. | Ballas P, Ruckert C, Wagener K, Drillich M, Kampfer P, Busse HJ, Ehling-Schulz M. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004198 | 2020 | |
| Phylogeny | Corynebacterium guaraldiae sp. nov.: a new species of Corynebacterium from human infections. | de Oliveira Sant'Anna L, Dos Santos LS, Araujo MRB, da Rocha DJPG, Ramos JN, Baio PVP, Del Peloso PF, da Costa Ferreira Leite C, Peixoto RS, Almuzara M, Vay C, Barberis C, Sangal V, Burkovski A, Aguiar ERGR, Mattos-Guaraldi AL, Pacheco LGC, Vieira VV. | Braz J Microbiol | 10.1007/s42770-023-00938-y | 2023 | |
| Classification of 27 Corynebacterium kroppenstedtii-Like Isolates Associated with Mastitis in China and Descriptions of C. parakroppenstedtii sp. nov. and C. pseudokroppenstedtii sp. nov. | Luo Q, Chen Q, Feng J, Zhang T, Luo L, Chen C, Liu X, Xu N, Qu P. | Microbiol Spectr | 10.1128/spectrum.01372-21 | 2022 | ||
| Phylogeny | Corynebacterium suicordis sp. nov., from pigs. | Vela AI, Mateos A, Collins MD, Briones V, Hutson RA, Dominguez L, Fernandez-Garayzabal JF. | Int J Syst Evol Microbiol | 10.1099/ijs.0.02645-0 | 2003 | |
| Phylogeny | Corynebacterium mastitidis sp. nov., isolated from milk of sheep with subclinical mastitis. | Fernandez-Garayzabal JF, Collins MD, Hutson RA, Fernandez E, Monasterio R, Marco J, Dominguez L. | Int J Syst Bacteriol | 10.1099/00207713-47-4-1082 | 1997 | |
| Phylogeny | Corynebacterium anserum sp. nov., isolated from the faeces of greater white-fronted geese (Anser albifrons) at Poyang Lake, PR China. | Liu Q, Wu K, Fan G, Bai X, Yang X, Pan Y, Cao L, Song W, Chen S, Xiong Y, Chen H | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004637 | 2021 | |
| Phylogeny | Classification of coryneform bacteria associated with human urinary tract infection (group D2) as Corynebacterium urealyticum sp. nov. | Pitcher D, Soto A, Soriano F, Valero-Guillen P | Int J Syst Bacteriol | 10.1099/00207713-42-1-178 | 1992 |
| #2986 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7109 |
| #19724 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #38133 | ; Curators of the CIP; |
| #46774 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 18158 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68379 | Automatically annotated from API Coryne . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #123741 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103524 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive3148.20260601.11
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data