Corynebacterium vitaeruminis (CCUG 28792, DSM 20294, ATCC 10234)

Name: Corynebacterium vitaeruminis (CCUG 28792, DSM 20294, ATCC 10234)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 3128

Type strain

Culture col. no. CCUG 28792 DSM 20294 ATCC 10234 NCIB 9291 VTT E-97777 16 more

NCBI tax ID(s) 1224164 38305

Special Collections DSMZ CCUG JCM KCTC CIP Wink compendium JMRC

History DSMZ <- H.G. Schlegel <- K. Komagata <- ATCC <- M.A. Rarrell (Flavobacterium vitarum) JCM <-- K. Suzuki CNF 008 <-- AJ 1525 <-- ATCC 10234 <-- M. A. Farrell. CIP <- 1982, ATCC <- M.A. Farrell, Flavobacterium vitarumen

Links

Corynebacterium vitaeruminis CCUG 28792 is a microaerophile bacterium that was isolated from Rumen.

microaerophile genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 14091

LMG 19075,ATCC 10234,CCUG 28792,CECT 537,IAM 12429,IFO 12143,IMET 13372,JCM 1323,NCIB 9291,NCIB 929,NCIMB 9291,KCTC 9648,VKM B-1211,CIP 82.07,IMET 11372,NBRC 12143,NCCB 52028,LMD 52.28,VKM Ac-2189,NCIM 2330,CGMCC 1.1889,VTT E-97777,DSM 20294,CIP 82.7

@ref 20215

Last LPSN update 2026-05-29 08:25:38

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Corynebacteriaceae

Genus Corynebacterium

Species Corynebacterium vitaeruminis

Full scientific name Corynebacterium vitaeruminis corrig. (Bechdel et al. 1928) Lanéelle et al. 1980

Synonyms (4)

Brevibacterium vitaeruminis
Corynebacterium vitarumen
Brevibacterium vitarumen
"Flavobacterium vitarumen"

Morphology

Cell morphology

@ref	Confidence	Gram stain
125439	93.584
125439	96.181	positive
125438	90.012	positive

Colony morphology

@ref	Colony color	Incubation period	Medium used
18636	Ochre yellow (1024)	10-14 days	ISP 2
18636	Ivory (1014)	10-14 days	ISP 3
18636	Colorless	10-14 days	ISP 4
18636	Colorless	10-14 days	ISP 5
18636	Ivory (1014)	10-14 days	ISP 6

Multicellular morphology

@ref	Forms multicellular complex	Medium name
18636		ISP 2
18636		ISP 3
18636		ISP 4
18636		ISP 5
18636		ISP 6

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
18636	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
18636	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
18636	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
18636	ISP 5		Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
18636	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
8697	CORYNEBACTERIUM AGAR (DSMZ Medium 53)	Medium recipe at MediaDive	Name: CORYNEBACTERIUM AGAR (DSMZ Medium 53) Composition: Agar 15.0 g/l Casein peptone 10.0 g/l NaCl 5.0 g/l Glucose 5.0 g/l Yeast extract 5.0 g/l Distilled water
39821	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
123877	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
8697	positive	growth	30
18636	positive	optimum	28
39821	positive	growth	30
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
49382	microaerophile
125439	facultative anaerobe	94.329

Spore formation

@ref	Spore formation	Confidence
125439		93.294

Halophily

@ref	Salt	Growth	Tested relation	Concentration
18636	NaCl	positive	growth	0 %

Murein

@ref	Murein short key	Type
8697	A31	A1gamma m-Dpm-direct

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
18636	22599 ChEBI	arabinose	-
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
18636	62968 ChEBI	cellulose	-
68368	16947 ChEBI	citrate	-	assimilation	from API 20E
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	+	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	+	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
18636	28757 ChEBI	fructose	-
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
18636	17234 ChEBI	glucose	+
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68368	25094 ChEBI	lysine	-	degradation	from API 20E
68379	17306 ChEBI	maltose	+	fermentation	from API Coryne
18636	29864 ChEBI	mannitol	-
18636	17268 ChEBI	myo-inositol	+
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
18636	16634 ChEBI	raffinose	-
18636	26546 ChEBI	rhamnose	+
18636	17992 ChEBI	sucrose	+
68379	17992 ChEBI	sucrose	+	fermentation	from API Coryne
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68379	16199 ChEBI	urea	+	hydrolysis	from API Coryne
68368	16199 ChEBI	urea	+	hydrolysis	from API 20E
18636	18222 ChEBI	xylose	+

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68368	15688 ChEBI	acetoin	+		from API 20E
68368	35581 ChEBI	indole		-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68382	beta-galactosidase	+	3.2.1.23	from API zym
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68368	beta-galactosidase	-	3.2.1.23	from API 20E
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	+	3.2.1.31	from API Coryne
68382	cystine arylamidase	+	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68379	gelatinase	+		from API Coryne
68368	gelatinase	-		from API 20E
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
68379	pyrazinamidase	+	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	+	3.4.19.3	from API Coryne
68382	trypsin	+	3.4.21.4	from API zym
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
68379	urease	+	3.5.1.5	from API Coryne
68368	urease	+	3.5.1.5	from API 20E
68382	valine arylamidase	+		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	biotin biosynthesis	100	4 of 4
66794	ppGpp biosynthesis	100	4 of 4
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	glycolate and glyoxylate degradation	100	6 of 6
66794	denitrification	100	2 of 2
66794	valine metabolism	100	9 of 9
66794	acetoin degradation	100	3 of 3
66794	formaldehyde oxidation	100	3 of 3
66794	cyanate degradation	100	3 of 3
66794	phenylacetate degradation (aerobic)	100	5 of 5
66794	starch degradation	100	10 of 10
66794	hydrogen production	100	5 of 5
66794	coenzyme A metabolism	100	4 of 4
66794	palmitate biosynthesis	100	22 of 22
66794	suberin monomers biosynthesis	100	2 of 2
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	adipate degradation	100	2 of 2
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	acetate fermentation	100	4 of 4
66794	folate polyglutamylation	100	1 of 1
66794	phenylalanine metabolism	92.31	12 of 13
66794	threonine metabolism	90	9 of 10
66794	propionate fermentation	90	9 of 10
66794	aspartate and asparagine metabolism	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	isoleucine metabolism	87.5	7 of 8
66794	citric acid cycle	85.71	12 of 14
66794	photosynthesis	85.71	12 of 14
66794	propanol degradation	85.71	6 of 7
66794	vitamin B1 metabolism	84.62	11 of 13
66794	vitamin B12 metabolism	82.35	28 of 34
66794	pyrimidine metabolism	82.22	37 of 45
66794	glutamate and glutamine metabolism	82.14	23 of 28
66794	pentose phosphate pathway	81.82	9 of 11
66794	vitamin K metabolism	80	4 of 5
66794	flavin biosynthesis	80	12 of 15
66794	methylglyoxal degradation	80	4 of 5
66794	ethylmalonyl-CoA pathway	80	4 of 5
66794	lipoate biosynthesis	80	4 of 5
66794	glycogen metabolism	80	4 of 5
66794	peptidoglycan biosynthesis	80	12 of 15
66794	heme metabolism	78.57	11 of 14
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	leucine metabolism	76.92	10 of 13
66794	glycolysis	76.47	13 of 17
66794	butanoate fermentation	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	C4 and CAM-carbon fixation	75	6 of 8
66794	sulfopterin metabolism	75	3 of 4
66794	gluconeogenesis	75	6 of 8
66794	purine metabolism	74.47	70 of 94
66794	proline metabolism	72.73	8 of 11
66794	metabolism of disaccharids	72.73	8 of 11
66794	NAD metabolism	72.22	13 of 18
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	tetrahydrofolate metabolism	71.43	10 of 14
66794	alanine metabolism	68.97	20 of 29
66794	non-pathway related	68.42	26 of 38
66794	octane oxidation	66.67	2 of 3
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	isoprenoid biosynthesis	65.38	17 of 26
66794	oxidative phosphorylation	64.84	59 of 91
66794	lipid metabolism	64.52	20 of 31
66794	tryptophan metabolism	63.16	24 of 38
66794	ketogluconate metabolism	62.5	5 of 8
66794	degradation of sugar alcohols	62.5	10 of 16
66794	urea cycle	61.54	8 of 13
66794	methionine metabolism	61.54	16 of 26
66794	cellulose degradation	60	3 of 5
66794	gallate degradation	60	3 of 5
66794	ubiquinone biosynthesis	57.14	4 of 7
66794	d-mannose degradation	55.56	5 of 9
66794	cysteine metabolism	55.56	10 of 18
66794	histidine metabolism	55.17	16 of 29
66794	lysine metabolism	54.76	23 of 42
66794	arginine metabolism	54.17	13 of 24
66794	sulfate reduction	53.85	7 of 13
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	pantothenate biosynthesis	50	3 of 6
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	CMP-KDO biosynthesis	50	2 of 4
66794	ethanol fermentation	50	1 of 2
66794	degradation of aromatic, nitrogen containing compounds	50	6 of 12
66794	glycogen biosynthesis	50	2 of 4
66794	glutathione metabolism	50	7 of 14
66794	phenylmercury acetate degradation	50	1 of 2
66794	Entner Doudoroff pathway	50	5 of 10
66794	vitamin B6 metabolism	45.45	5 of 11
66794	phenol degradation	45	9 of 20
66794	nitrate assimilation	44.44	4 of 9
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	arachidonate biosynthesis	40	2 of 5
66794	glycine metabolism	40	4 of 10
66794	3-chlorocatechol degradation	40	2 of 5
66794	O-antigen biosynthesis	40	2 of 5
66794	creatinine degradation	40	2 of 5
66794	glycine betaine biosynthesis	40	2 of 5
66794	phenylpropanoid biosynthesis	38.46	5 of 13
66794	androgen and estrogen metabolism	37.5	6 of 16
66794	carotenoid biosynthesis	36.36	8 of 22
66794	degradation of pentoses	35.71	10 of 28
66794	bile acid biosynthesis, neutral pathway	35.29	6 of 17
66794	enterobactin biosynthesis	33.33	1 of 3
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	lipid A biosynthesis	33.33	3 of 9
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	arachidonic acid metabolism	33.33	6 of 18
66794	degradation of hexoses	33.33	6 of 18
66794	ascorbate metabolism	31.82	7 of 22
66794	coenzyme M biosynthesis	30	3 of 10
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	tyrosine metabolism	28.57	4 of 14
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	d-xylose degradation	27.27	3 of 11
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	allantoin degradation	22.22	2 of 9
66794	4-hydroxymandelate degradation	22.22	2 of 9
66794	polyamine pathway	21.74	5 of 23

Fatty acid profile

Metadata FA analysis

@ref

49382

Fatty acid	Percentage	ECL
C16:0	37.9	16
C16:1 ω7c	25.8	15.819
C18:1 ω9c	22.9	17.769
C18:2 ω6,9c/C18:0 ANTE	4	17.724
C17:1 ω8c	3.8	16.792
C17:0	3.6	17
C18:0	1.9	18

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
18636	-	-	-	-	-	-	+	-	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
18636	-	+	+	-	+	+	+	+	+/-	+	+	not determinedn.d.	-	+	-	+	+	+/-	+	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
18636	not determinedn.d.	+	+	+	-	+	+	+	+	+	+	+	-	+	-	+	+	+	-	-

Isolation, sampling and environmental information

Isolation

67770

Sample typeRumen

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
18636	1	Risk group (German classification) According to TRBA 466
8697	1	Risk group (German classification) According to TRBA 466
123877	2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM55080v1 assembly for Corynebacterium vitaeruminis DSM 20294	complete	GCA_000550805	1224164.3	2558860221	1224164	99.26

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
67770	Corynebacterium vitaeruminis strain LMG 19075 16S ribosomal RNA gene, partial sequence	JX986971	1472	38305
67770	Corynebacterium vitarumen 16S rRNA gene, strain NCTC 20294	X84680	1434	1224164
124043	Corynebacterium vitaeruminis 16S ribosomal RNA gene, partial sequence.	AY438066	418	38305

GC content

@ref	GC-content (mol%)	Method
8697	64.4
67770	64.8	thermal denaturation, midpoint method (Tm)
67770	64.4	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM55080v1 assembly for Corynebacterium vitaeruminis DSM 20294
BV-BRC: 1224164.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	94.33	no
125439	gram_stain	BacteriaNetⓘ	positive	96.18	no
125439	motility	BacteriaNetⓘ	no	93.58	no
125439	spore_formation	BacteriaNetⓘ	no	93.29	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Corynebacterium vitaeruminis DSM 20294 DSM 20294
NCBI: GCA_000550805.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.01	no
125438	anaerobic	anaerobicⓘ	no	91.03	no
125438	aerobic	aerobicⓘ	yes	55.95	yes
125438	spore-forming	spore-formingⓘ	no	77.43	no
125438	thermophilic	thermophileⓘ	no	96.50	yes
125438	flagellated	motile2+ⓘ	no	88.10	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	The phenotype and genotype of fermentative prokaryotes.	Hackmann TJ, Zhang B.	Sci Adv	10.1126/sciadv.adg8687	2023
Biotechnology	An Evaluation of the Antibacterial, Antileishmanial, and Cytotoxic Potential of the Secondary Metabolites of Streptomyces sp. ARH (A3).	de Azevedo VLS, Rosa FC, Dias LRL, Batista LA, Melo MC, Sales LAT, Branco AJM, Araujo TRR, de Miranda RCM, Alianca ASDS.	Microorganisms	10.3390/microorganisms12030476	2024
	Transcriptional Regulation of the Creatine Utilization Genes of Corynebacterium glutamicum ATCC 14067 by AmtR, a Central Nitrogen Regulator.	Zhang H, Ouyang Z, Zhao N, Han S, Zheng S.	Front Bioeng Biotechnol	10.3389/fbioe.2022.816628	2022
	Streamlined identification of strain engineering targets for bioprocess improvement using metabolic pathway enrichment analysis.	Cortada-Garcia J, Daly R, Arnold SA, Burgess K.	Sci Rep	10.1038/s41598-023-39661-x	2023
Enzymology	Heterologous expression of genes for bioconversion of xylose to xylonic acid in Corynebacterium glutamicum and optimization of the bioprocess.	Sundar MSL, Susmitha A, Rajan D, Hannibal S, Sasikumar K, Wendisch VF, Nampoothiri KM.	AMB Express	10.1186/s13568-020-01003-9	2020
	Antimicrobial Potential of Streptomyces ansochromogenes (PB₃) Isolated From a Plant Native to the Amazon Against Pseudomonas aeruginosa.	Amorim EADF, Castro EJM, da Souza SV, Alves MS, Dias LRL, Melo MHF, da Silva IMA, Villis PCM, Bonfim MRQ, Falcai A, Silva MRC, Monteiro-Neto V, Alianca A, da Silva LCN, de Miranda RCM.	Front Microbiol	10.3389/fmicb.2020.574693	2020
Genetics	Tales of diversity: Genomic and morphological characteristics of forty-six Arthrobacter phages.	Klyczek KK, Bonilla JA, Jacobs-Sera D, Adair TL, Afram P, Allen KG, Archambault ML, Aziz RM, Bagnasco FG, Ball SL, Barrett NA, Benjamin RC, Blasi CJ, Borst K, Braun MA, Broomell H, Brown CB, Brynell ZS, Bue AB, Burke SO, Casazza W, Cautela JA, Chen K, Chimalakonda NS, Chudoff D, Connor JA, Cross TS, Curtis KN, Dahlke JA, Deaton BM, Degroote SJ, DeNigris DM, DeRuff KC, Dolan M, Dunbar D, Egan MS, Evans DR, Fahnestock AK, Farooq A, Finn G, Fratus CR, Gaffney BL, Garlena RA, Garrigan KE, Gibbon BC, Goedde MA, Guerrero Bustamante CA, Harrison M, Hartwell MC, Heckman EL, Huang J, Hughes LE, Hyduchak KM, Jacob AE, Kaku M, Karstens AW, Kenna MA, Khetarpal S, King RA, Kobokovich AL, Kolev H, Konde SA, Kriese E, Lamey ME, Lantz CN, Lapin JS, Lawson TO, Lee IY, Lee SM, Lee-Soety JY, Lehmann EM, London SC, Lopez AJ, Lynch KC, Mageeney CM, Martynyuk T, Mathew KJ, Mavrich TN, McDaniel CM, McDonald H, McManus CJ, Medrano JE, Mele FE, Menninger JE, Miller SN, Minick JE, Nabua CT, Napoli CK, Nkangabwa M, Oates EA, Ott CT, Pellerino SK, Pinamont WJ, Pirnie RT, Pizzorno MC, Plautz EJ, Pope WH, Pruett KM, Rickstrew G, Rimple PA, Rinehart CA, Robinson KM, Rose VA, Russell DA, Schick AM, Schlossman J, Schneider VM, Sells CA, Sieker JW, Silva MP, Silvi MM, Simon SE, Staples AK, Steed IL, Stowe EL, Stueven NA, Swartz PT, Sweet EA, Sweetman AT, Tender C, Terry K, Thomas C, Thomas DS, Thompson AR, Vanderveen L, Varma R, Vaught HL, Vo QD, Vonberg ZT, Ware VC, Warrad YM, Wathen KE, Weinstein JL, Wyper JF, Yankauskas JR, Zhang C, Hatfull GF.	PLoS One	10.1371/journal.pone.0180517	2017
	Redirection of carbon flux to lysine in a recombinant of Corynebacterium lactofermentum ATCC 21799 by limited supply of pantothenate.	An GH, Song KB, Sinskey AJ.	J Biosci Bioeng	10.1016/s1389-1723(99)80196-0	1999
	Isolation and characterization of IS31831, a transposable element from Corynebacterium glutamicum.	Vertes AA, Inui M, Kobayashi M, Kurusu Y, Yukawa H.	Mol Microbiol	10.1111/j.1365-2958.1994.tb00351.x	1994
	Presence of mrr- and mcr-like restriction systems in coryneform bacteria.	Vertes AA, Inui M, Kobayashi M, Kurusu Y, Yukawa H.	Res Microbiol	10.1016/0923-2508(93)90043-2	1993
Metabolism	Metabolome analysis-based design and engineering of a metabolic pathway in Corynebacterium glutamicum to match rates of simultaneous utilization of D-glucose and L-arabinose.	Kawaguchi H, Yoshihara K, Hara KY, Hasunuma T, Ogino C, Kondo A, Kondo A.	Microb Cell Fact	10.1186/s12934-018-0927-6	2018
Enzymology	Characterization of a novel beta-L-Arabinofuranosidase in Bifidobacterium longum: functional elucidation of A DUF1680 family member.	Fujita K, Takashi Y, Obuchi E, Kitahara K, Suganuma T.	J Biol Chem	10.1074/jbc.m111.248690	2011
Metabolism	[Nicotinamide-adenine dinucleotide synthesis by microorganisms].	Kutseva LS, Bazdyreva NM, Ivanova LB.	Prikl Biokhim Mikrobiol		1981
Enzymology	Characterization of a novel beta-L-arabinofuranosidase in Bifidobacterium longum: functional elucidation of a DUF1680 protein family member.	Fujita K, Takashi Y, Obuchi E, Kitahara K, Suganuma T.	J Biol Chem	10.1074/jbc.m113.528711	2014
	AraR, an l-Arabinose-Responsive Transcriptional Regulator in Corynebacterium glutamicum ATCC 31831, Exerts Different Degrees of Repression Depending on the Location of Its Binding Sites within the Three Target Promoter Regions.	Kuge T, Teramoto H, Inui M.	J Bacteriol	10.1128/jb.00314-15	2015
Metabolism	The LacI-Type transcriptional regulator AraR acts as an L-arabinose-responsive repressor of L-arabinose utilization genes in Corynebacterium glutamicum ATCC 31831.	Kuge T, Teramoto H, Yukawa H, Inui M.	J Bacteriol	10.1128/jb.01655-14	2014
	Exploring the unique N-glycome of the opportunistic human pathogen Acanthamoeba.	Schiller B, Makrypidi G, Razzazi-Fazeli E, Paschinger K, Walochnik J, Wilson IB.	J Biol Chem	10.1074/jbc.m112.418095	2012
Enzymology	Identification of vacuoles containing extraintestinal differentiated forms of Legionella pneumophila in colonized Caenorhabditis elegans soil nematodes.	Hellinga JR, Garduno RA, Kormish JD, Tanner JR, Khan D, Buchko K, Jimenez C, Pinette MM, Brassinga AK.	Microbiologyopen	10.1002/mbo3.271	2015
Metabolism	Identification and functional analysis of the gene cluster for L-arabinose utilization in Corynebacterium glutamicum.	Kawaguchi H, Sasaki M, Vertes AA, Inui M, Yukawa H.	Appl Environ Microbiol	10.1128/aem.02912-08	2009
	Planktonic replication is essential for biofilm formation by Legionella pneumophila in a complex medium under static and dynamic flow conditions.	Mampel J, Spirig T, Weber SS, Haagensen JA, Molin S, Hilbi H.	Appl Environ Microbiol	10.1128/aem.72.4.2885-2895.2006	2006
	Identification of plasmid partition function in coryneform bacteria.	Kurusu Y, Satoh Y, Inui M, Kohama K, Kobayashi M, Terasawa M, Yukawa H.	Appl Environ Microbiol	10.1128/aem.57.3.759-764.1991	1991
	Optimization of microbial fuel cell process using a novel consortium for aromatic hydrocarbon bioremediation and bioelectricity generation.	Mukherjee A, Zaveri P, Patel R, Shah MT, Munshi NS.	J Environ Manage	10.1016/j.jenvman.2021.113546	2021
Phylogeny	Compositional Data Analysis of 16S rRNA Gene Sequencing Results from Hospital Airborne Microbiome Samples.	Perrone MR, Romano S, De Maria G, Tundo P, Bruno AR, Tagliaferro L, Maffia M, Fragola M.	Int J Environ Res Public Health	10.3390/ijerph191610107	2022
Enzymology	Beneficial and Safety Properties of a Corynebacterium vitaeruminis Strain Isolated from the Cow Rumen.	Colombo M, Castilho NPA, Todorov SD, Nero LA.	Probiotics Antimicrob Proteins	10.1007/s12602-017-9263-0	2017
Genetics	Metagenomic and Culturomics Analysis of Microbial Communities within Surface Sediments and the Prevalence of Antibiotic Resistance Genes in a Pristine River: The Zaqu River in the Lancang River Source Region, China.	Yan Y, Xu J, Huang W, Fan Y, Li Z, Tian M, Ma J, Lu X, Liang J.	Microorganisms	10.3390/microorganisms12050911	2024
	Insights from metagenomics on microbial biosynthesis of vitamins B and K₂ in chicken gut microbiota.	Yu HL, Hou XW, Zhao JX, Liu GH, Meng JX, Wei YJ, Cai Y, Liu J, Shang KM, Ni HB, Liu R, Ma H, Nan FL, Zhang XX, Chen BN, Yang X.	Front Vet Sci	10.3389/fvets.2025.1646825	2025
	Influence of pro- and prebiotics on gastric, duodenal and colonic bioaccessibility of the mycotoxin beauvericin	Mallebrera B, Meca G, Meca G, Manyes L, Manes J, Font de Affolter G.	J Food Compost Anal	10.1016/j.jfca.2013.09.003	2013
	Tumor bacterial markers diagnose the initiation and four stages of colorectal cancer.	Cai P, Xiong J, Sha H, Dai X, Lu J.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1123544	2023
Genetics	Bacterial Diversity and Community Structure of a Municipal Solid Waste Landfill: A Source of Lignocellulolytic Potential.	Chukwuma OB, Rafatullah M, Tajarudin HA, Ismail N.	Life (Basel)	10.3390/life11060493	2021
Phylogeny	Functional gene-guided enrichment plus in situ microsphere cultivation enables isolation of new crucial ureolytic bacteria from the rumen of cattle.	Liu S, Yu Z, Zhong H, Zheng N, Huws S, Wang J, Zhao S.	Microbiome	10.1186/s40168-023-01510-4	2023
Pathogenicity	[Effect of synthetic surfactants on some biological properties of non-pathogenic species of the genus Corynebacterium].	Mykhal's'kyi LO, Furtat IM, Radchenko OS, Stepura LH.	Mikrobiol Z		2006
	Bacterial diversity in aortic aneurysms determined by 16S ribosomal RNA gene analysis.	Marques da Silva R, Caugant DA, Eribe ER, Aas JA, Lingaas PS, Geiran O, Tronstad L, Olsen I.	J Vasc Surg	10.1016/j.jvs.2006.07.021	2006
	Exploration of Nitrate Reductase Metabolic Pathway in Corynebacterium pseudotuberculosis.	Almeida S, Sousa C, Abreu V, Diniz C, Dorneles EM, Lage AP, Barh D, Azevedo V.	Int J Genomics	10.1155/2017/9481756	2017
Genetics	Metagenomics Reveals That Intravenous Injection of Beta-Hydroxybutyric Acid (BHBA) Disturbs the Nasopharynx Microflora and Increases the Risk of Respiratory Diseases.	Qi J, Cai D, Cui Y, Tan T, Zou H, Guo W, Xie Y, Guo H, Chen SY, Ma X, Gou L, Cui H, Geng Y, Zhang M, Ye G, Zhong Z, Ren Z, Hu Y, Wang Y, Deng J, Yu S, Cao S, Wanapat M, Fang J, Wang Z, Zuo Z.	Front Microbiol	10.3389/fmicb.2020.630280	2020
	The Porcine Nasal Microbiota with Particular Attention to Livestock-Associated Methicillin-Resistant Staphylococcus aureus in Germany-A Culturomic Approach.	Schlattmann A, von Lutzau K, Kaspar U, Becker K.	Microorganisms	10.3390/microorganisms8040514	2020
Enzymology	Lactobacillus curvatus UFV-NPAC1 and other lactic acid bacteria isolated from calabresa, a fermented meat product, present high bacteriocinogenic activity against Listeria monocytogenes.	Castilho NPA, Colombo M, Oliveira LL, Todorov SD, Nero LA.	BMC Microbiol	10.1186/s12866-019-1436-4	2019
Metabolism	The Pathway of Sulfide Oxidation to Octasulfur Globules in the Cytoplasm of Aerobic Bacteria.	Wang T, Ran M, Li X, Liu Y, Xin Y, Liu H, Liu H, Xia Y, Xun L	Appl Environ Microbiol	10.1128/AEM.01941-21	2021
Genetics	Complete genome sequence of Corynebacterium vitaeruminis DSM 20294T, isolated from the cow rumen as a vitamin B producer.	Al-Dilaimi A, Albersmeier A, Kalinowski J, Ruckert C	J Biotechnol	10.1016/j.jbiotec.2014.08.036	2014
Phylogeny	Corynebacterium pelargi sp. nov., isolated from the trachea of white stork nestlings.	Kampfer P, Jerzak L, Bochenski M, Kasprzak M, Wilharm G, Golke J, Busse HJ, Glaeser SP.	Int J Syst Evol Microbiol	10.1099/ijs.0.000115	2015

References

#8697	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20294
#18636	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#39821	; Curators of the CIP;
#49382	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 28792
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#123877	Collection of Institut Pasteur ; Curators of the CIP; CIP 82.7
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Corynebacterium vitaeruminis (CCUG 28792, DSM 20294, ATCC 10234)

Name and taxonomic classification

Morphology

Cell morphology

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Multicellular morphology

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Culture medium

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Physiology and metabolism

Oxygen tolerance

Spore formation

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Murein

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

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API 20E

API coryne

API zym

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Isolation

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Genome sequences

Genome browser: GCA_000550805

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