Name: Adlercreutzia caecimuris B7
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 3077

Type strain:

Species: Adlercreutzia caecimuris

Strain Designation: B7

Culture col. no.: DSM 21839, CCUG 56815

Strain history: <- T. Clavel, TU Munich, Freising-Weihenstephan, Germany; B7 <- W. Duck and C. Elson, Univ. Alabama at Birmingham (UAB), USA

NCBI tax ID(s): 671266 (species)

SI-ID 404406

DSM 21839, CCUG 56815

Section

Adlercreutzia caecimuris B7 is an anaerobe, mesophilic, Gram-positive bacterium that was isolated from cecum of mouse model of spontaneous colitis .

Gram-positive
rod-shaped
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Coriobacteriia*
	Order	*Eggerthellales*
	Family	*Eggerthellaceae*
	Genus	*Adlercreutzia*
	Species	**Adlercreutzia caecimuris**
	Full Scientific Name (LPSN)	Adlercreutzia caecimuris (Clavel et al. 2010) Nouioui et al. 2018

Synonym

Enterorhabdus caecimuris

Information on morphological and physiological properties Morphology

[Ref.: #29529]	Gram stain	positive

[Ref.: #29529]	Cell length	2 µm

[Ref.: #29529]	Cell width	0.5 µm

[Ref.: #29529]	Cell shape	rod-shaped

[Ref.: #29529]	Motility	no

[Ref.: #61098]

Incubation period

2-3 days

[Ref.: #29529]

Pigment production

Information on culture and growth conditions Culture and growth conditions

[Ref.: #15982]

Culture medium

WILKINS-CHALGREN ANAEROBE BROTH (DSMZ Medium 339)

[Ref.: #15982]

Culture medium growth

[Ref.: #15982]

Culture medium link

Medium recipe at MediaDive

[Ref.: #15982]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #15982]	growth	37 °C
[Ref.: #29529]	growth	27-40 °C
[Ref.: #29529]	optimum	37 °C
[Ref.: #61098]	growth	37 °C

[Ref.: #15982]	Temperature range	mesophilic
[Ref.: #29529]	Temperature range	mesophilic
[Ref.: #61098]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #29529]			optimum	7.2
[Ref.: #29529]			growth	7.2

Information on physiology and metabolism Physiology and metabolism

[Ref.: #15982]	Oxygen tolerance	anaerobe
[Ref.: #29529]	Oxygen tolerance	anaerobe
[Ref.: #61098]	Oxygen tolerance	anaerobe

[Ref.: #29529]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29529]		NaCl		growth	0-2	%
[Ref.: #29529]		NaCl		optimum	0-2	%

[Ref.: #29529]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68380]	arginine ChEBI	+	hydrolysis	* from API rID32A
[Ref.: #68380]	D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #29529]	galactose ChEBI	+	carbon source
[Ref.: #29529]	glucose ChEBI	+	carbon source
[Ref.: #68380]	L-glutamate ChEBI	+	degradation	* from API rID32A
[Ref.: #68380]	nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #68380]	raffinose ChEBI	-	fermentation	* from API rID32A
[Ref.: #29529]	ribose ChEBI	+	carbon source
[Ref.: #68380]	tryptophan ChEBI	-	energy source	* from API rID32A
[Ref.: #68380]	urea ChEBI	-	hydrolysis	* from API rID32A

	Metabolite production	Metabolite	Production
[Ref.: #68380]		indole ChEBI	no	* from API rID32A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	-	* from API rID32A

	Enzyme	Enzyme activity	EC number
[Ref.: #68380]	alanine arylamidase	-	3.4.11.2	* from API rID32A
[Ref.: #68380]	alkaline phosphatase	-	3.1.3.1	* from API rID32A
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68380]	alpha-fucosidase	-	3.2.1.51	* from API rID32A
[Ref.: #68380]	alpha-galactosidase	-	3.2.1.22	* from API rID32A
[Ref.: #68380]	alpha-glucosidase	-	3.2.1.20	* from API rID32A
[Ref.: #68380]	arginine dihydrolase	+	3.5.3.6	* from API rID32A
[Ref.: #68380]	beta-galactosidase	-	3.2.1.23	* from API rID32A
[Ref.: #68380]	beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #68380]	beta-glucosidase	-	3.2.1.21	* from API rID32A
[Ref.: #68380]	beta-glucuronidase	-	3.2.1.31	* from API rID32A
[Ref.: #68380]	glutamate decarboxylase	+	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]	glycin arylamidase	-		* from API rID32A
[Ref.: #68380]	histidine arylamidase	-		* from API rID32A
[Ref.: #68380]	L-arginine arylamidase	-		* from API rID32A
[Ref.: #68380]	leucine arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	leucyl glycin arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32A
[Ref.: #68380]	phenylalanine arylamidase	-		* from API rID32A
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #68380]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68380]	tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #68380]	tyrosine arylamidase	-		* from API rID32A
[Ref.: #68380]	urease	-	3.5.1.5	* from API rID32A
	Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #15982]	12748	-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #15982]	Sample type/isolated from	cecum of mouse model of spontaneous colitis (C3H/HeJBir mouse)
[Ref.: #15982]	Geographic location (country and/or sea, region)	Birmingham, Alabama
[Ref.: #15982]	Country	USA
[Ref.: #15982]	Country ISO 3 Code	USA
[Ref.: #15982]	Continent	North America

[Ref.: #61098]	Sample type/isolated from	Mouse intestine
[Ref.: #61098]	Geographic location (country and/or sea, region)	Alabama,Birmingham
[Ref.: #61098]	Country	USA
[Ref.: #61098]	Country ISO 3 Code	USA
[Ref.: #61098]	Continent	North America
* marker position based on {}

Isolation sources categories

#Infection	#Inflammation	-
#Host	#Mammals	#Muridae (Mouse/Rat)
#Host Body-Site	#Gastrointestinal tract	#Large intestine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence DQ789120 (>99% sequence identity) for Adlercreutzia caecimuris subclade from Microbeatlas

Aquatic Samples	380
Soil Samples	213
Animal Samples	34868
Plant Samples	129
Total Samples	35590

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #15982]	Enterorhabdus caecimuris strain B7 16S ribosomal RNA gene, partial sequence	DQ789120	1474	ENA	1235794 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Adlercreutzia caecimuris B7	GCA_000403355	contig	GenBank	1235794 tax ID	*
[Ref.: #66792]	Adlercreutzia caecimuris DSM 21839	GCA_024623275	contig	GenBank	671266 tax ID	*

[Ref.: #15982]	GC-content	64.5 mol%	high performance liquid chromatography (HPLC)
[Ref.: #29529]	GC-content	64.5 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Adlercreutzia caecimuris B7 B7 NCBI: GCA_000403355.2
[Ref.: #69480]	motile	no	93.228	no
[Ref.: #69480]	flagellated	no	98.622	no
[Ref.: #69480]	gram-positive	yes	90.12	yes
[Ref.: #69480]	anaerobic	yes	98.889	no
[Ref.: #69480]	aerobic	no	95.998	yes
[Ref.: #69480]	halophile	no	88.409	no
[Ref.: #69480]	spore-forming	no	92.557	yes
[Ref.: #69480]	thermophile	no	99.029	yes
[Ref.: #69480]	glucose-util	yes	60.261	no
[Ref.: #69480]	glucose-ferment	no	51.933	no

Availability in culture collections External links

[Ref.: #15982]

Culture collection no.

DSM 21839, CCUG 56815

[Ref.: #72596]

SI-ID 404406

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Ellagibacter isourolithinifaciens gen. nov., sp. nov., a new member of the family Eggerthellaceae, isolated from human gut.	Beltran D, Romo-Vaquero M, Espin JC, Tomas-Barberan FA, Selma MV	Int J Syst Evol Microbiol	10.1099/ijsem.0.002735	2018	*
Phylogeny	Enterorhabdus caecimuris sp. nov., a member of the family Coriobacteriaceae isolated from a mouse model of spontaneous colitis, and emended description of the genus Enterorhabdus Clavel et al. 2009.	Clavel T, Duck W, Charrier C, Wenning M, Elson C, Haller D	Int J Syst Evol Microbiol	10.1099/ijs.0.015016-0	2009	*

References

#15982

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21839

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29529

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25926 (see below)

#61098 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56815

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68380

Automatically annotated from API rID32A .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#72596

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404406.1 )

#25926

IJSEM 1527 2010 ( DOI 10.1099/ijs.0.015016-0 , PubMed 19684311 )

* These data were automatically processed and therefore are not curated

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Adlercreutzia caecimuris B7 B7

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