Adlercreutzia mucosicola Mt1B8 | Type strain | DSM 19490, CCUG 54980 | BacDiveID:3076

Strain identifier

BacDive ID: 3076

Type strain:

Species: Adlercreutzia mucosicola

Strain Designation: Mt1B8

Culture col. no.: DSM 19490, CCUG 54980

Strain history: <- T. Clavel, Research Center for Nutrition and Food Sci. (ZIEL), TU Munich, GERMANY; Mt1B8

NCBI tax ID(s): 1121866 (strain), 580026 (species)

SI-ID 405049

DSM 19490, CCUG 54980

Section

Adlercreutzia mucosicola Mt1B8 is an anaerobe, mesophilic, Gram-positive animal pathogen that was isolated from ileal mucosa of a 12-week-old female TNF^deltaARE mouse.

Gram-positive
rod-shaped
anaerobe
animal pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Coriobacteriia*
	Order	*Eggerthellales*
	Family	*Eggerthellaceae*
	Genus	*Adlercreutzia*
	Species	**Adlercreutzia mucosicola**
	Full Scientific Name (LPSN)	Adlercreutzia mucosicola (Clavel et al. 2009) Nouioui et al. 2018

Synonym

Enterorhabdus mucosicola

Information on morphological and physiological properties Morphology

[Ref.: #28980]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #28980]	Cell length	2 µm

[Ref.: #28980]	Cell width	0.5 µm

[Ref.: #28980]	Cell shape	rod-shaped

Incubation period

2-3 days

Multimedia content

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Information on culture and growth conditions Culture and growth conditions

Culture medium

WILKINS-CHALGREN ANAEROBE BROTH (DSMZ Medium 339)

Culture medium growth

Culture medium link

Medium recipe at MediaDive

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #8116]			growth	37 °C
[Ref.: #28980]			growth	30-40 °C
[Ref.: #28980]			optimum	35 °C
[Ref.: #60418]			growth	37 °C

[Ref.: #8116]	Temperature range	mesophilic
[Ref.: #28980]	Temperature range	mesophilic
[Ref.: #60418]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #28980]			optimum	7.5
[Ref.: #28980]			growth	5.5-9.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8116]	Oxygen tolerance	anaerobe
[Ref.: #60418]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %99.744

[Ref.: #28980]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %96
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.983

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #28980]		alanine ChEBI	+	carbon source
[Ref.: #68380]		arginine ChEBI	+	hydrolysis	* from API rID32A
[Ref.: #68380]		D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #28980]		glycine ChEBI	+	carbon source
[Ref.: #28980]		histidine ChEBI	+	carbon source
[Ref.: #68380]		L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #28980]		leucine ChEBI	+	carbon source
[Ref.: #68380]		nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #28980]		phenylalanine ChEBI	+	carbon source
[Ref.: #28980]		proline ChEBI	+	carbon source
[Ref.: #68380]		raffinose ChEBI	-	fermentation	* from API rID32A
[Ref.: #28980]		serine ChEBI	+	carbon source
[Ref.: #68380]		tryptophan ChEBI	-	energy source	* from API rID32A
[Ref.: #68380]		urea ChEBI	-	hydrolysis	* from API rID32A
		Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68380]		indole ChEBI	no	* from API rID32A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	-	* from API rID32A

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #68380]		alanine arylamidase	+	3.4.11.2	* from API rID32A
[Ref.: #68380]		alkaline phosphatase	-	3.1.3.1	* from API rID32A
[Ref.: #68380]		alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68380]		alpha-fucosidase	-	3.2.1.51	* from API rID32A
[Ref.: #68380]		alpha-galactosidase	-	3.2.1.22	* from API rID32A
[Ref.: #68380]		alpha-glucosidase	-	3.2.1.20	* from API rID32A
[Ref.: #68380]		arginine dihydrolase	+	3.5.3.6	* from API rID32A
[Ref.: #68380]		beta-galactosidase	-	3.2.1.23	* from API rID32A
[Ref.: #68380]		beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #68380]		beta-glucosidase	-	3.2.1.21	* from API rID32A
[Ref.: #68380]		beta-glucuronidase	-	3.2.1.31	* from API rID32A
[Ref.: #68380]		glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]		glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]		glycin arylamidase	+		* from API rID32A
[Ref.: #68380]		histidine arylamidase	+		* from API rID32A
[Ref.: #68380]		L-arginine arylamidase	-		* from API rID32A
[Ref.: #68380]		leucine arylamidase	+	3.4.11.1	* from API rID32A
[Ref.: #68380]		leucyl glycin arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]		N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32A
[Ref.: #68380]		phenylalanine arylamidase	+		* from API rID32A
[Ref.: #68380]		proline-arylamidase	+	3.4.11.5	* from API rID32A
[Ref.: #68380]		pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32A
[Ref.: #68380]		serine arylamidase	+		* from API rID32A
[Ref.: #68380]		tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #68380]		tyrosine arylamidase	+		* from API rID32A
[Ref.: #68380]		urease	-	3.5.1.5	* from API rID32A
		Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #8116]	13239	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	+	-	+	+	+	+	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8116]	Sample type/isolated from	ileal mucosa of a 12-week-old female TNF^deltaARE mouse
[Ref.: #8116]	Geographic location (country and/or sea, region)	Munich
[Ref.: #8116]	Country	Germany
[Ref.: #8116]	Country ISO 3 Code	DEU
[Ref.: #8116]	Continent	Europe

[Ref.: #60418]	Sample type/isolated from	Mouse ileal tissue (TNFdeltaARE mouse)
[Ref.: #60418]	Sampling date	2007-04-26
[Ref.: #60418]	Geographic location (country and/or sea, region)	Freising-Weihenstephan
[Ref.: #60418]	Country	Germany
[Ref.: #60418]	Country ISO 3 Code	DEU
[Ref.: #60418]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Muridae (Mouse/Rat)
#Host Body-Site	#Gastrointestinal tract	#Small intestine

What are isolation sources categories?

Global distribution of 16S sequence AM747811 (>99% sequence identity) for Adlercreutzia mucosicola subclade from Microbeatlas

Aquatic Samples	119
Soil Samples	89
Animal Samples	17235
Plant Samples	116
Total Samples	17559

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8116]	Pathogenicity (animal)	yes
[Ref.: #8116]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8116]	Enterorhabdus mucosicola partial 16S rRNA gene, type strain Mt1B8T	AM747811	1450	ENA	580026 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Adlercreutzia mucosicola DSM 19490	GCA_000422625	scaffold	GenBank	1121866 tax ID	*
[Ref.: #66792]	Enterorhabdus mucosicola DSM 19490	1121866.8	wgs	PATRIC	1121866 tax ID	*
[Ref.: #66792]	Enterorhabdus mucosicola DSM 19490	2524023091	draft	JGI IMG/M	1121866 tax ID	*
[Ref.: #66792]	Adlercreutzia mucosicola DSM 19490	GCA_024623255	contig	GenBank	580026 tax ID	*

[Ref.: #8116]	GC-content	64.2 mol%	high performance liquid chromatography (HPLC)
[Ref.: #28980]	GC-content	64.2 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Adlercreutzia mucosicola DSM 19490 DSM 19490 NCBI: GCA_000422625.1
[Ref.: #69481]	spore-forming	no	96	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Adlercreutzia mucosicola DSM 19490 DSM 19490 NCBI: GCA_000422625.1
[Ref.: #69480]	motile	no	92.343	no
[Ref.: #69480]	flagellated	no	98.389	no
[Ref.: #69480]	gram-positive	yes	88.469	no
[Ref.: #69480]	anaerobic	yes	98.697	yes
[Ref.: #69480]	aerobic	no	96.184	yes
[Ref.: #69480]	halophile	no	89.03	no
[Ref.: #69480]	spore-forming	no	92.698	yes
[Ref.: #69480]	thermophile	no	99.428	no
[Ref.: #69480]	glucose-util	yes	63.879	no
[Ref.: #69480]	glucose-ferment	no	58.304	no

Availability in culture collections External links

Culture collection no.

DSM 19490, CCUG 54980

SI-ID 405049

*

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Adlercreutzia hattorii sp. nov., an equol non-producing bacterium isolated from human faeces.	Sakamoto M, Ikeyama N, Yuki M, Murakami T, Mori H, Iino T, Ohkuma M	Int J Syst Evol Microbiol	10.1099/ijsem.0.005121	2021	*
Phylogeny	Enterorhabdus caecimuris sp. nov., a member of the family Coriobacteriaceae isolated from a mouse model of spontaneous colitis, and emended description of the genus Enterorhabdus Clavel et al. 2009.	Clavel T, Duck W, Charrier C, Wenning M, Elson C, Haller D	Int J Syst Evol Microbiol	10.1099/ijs.0.015016-0	2009	*
Phylogeny	Isolation of bacteria from the ileal mucosa of TNFdeltaARE mice and description of Enterorhabdus mucosicola gen. nov., sp. nov.	Clavel T, Charrier C, Braune A, Wenning M, Blaut M, Haller D	Int J Syst Evol Microbiol	10.1099/ijs.0.003087-0	2009	*

References

#8116

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19490

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#28980

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25414 (see below)

#60418 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 54980

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66793

Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )

#68380

Automatically annotated from API rID32A .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#72595

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405049.1 )

#25414

IJSEM 1805 2009 ( DOI 10.1099/ijs.0.003087-0 , PubMed 19542111 )

* These data were automatically processed and therefore are not curated

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