Hylemonella gracilis (DSM 9158, ATCC 19624, CCUG 56031)

Name: Hylemonella gracilis (DSM 9158, ATCC 19624, CCUG 56031)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2973

Type strain

Strain Designation D4

Culture col. no. DSM 9158 ATCC 19624 CCUG 56031 LMG 8201 NBRC 14920 3 more

NCBI tax ID(s) 887062 80880

Special Collections DSMZ CCUG CIP

Links

Hylemonella gracilis D4 is a mesophilic, Gram-negative, motile prokaryote that was isolated from pondwater.

Gram-negative motile rod-shaped mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 92577

LMG 4333,ATCC 19624,LMG 8201,DSM 9158,LMG 11198,IFO 14920,VKM B-1405,NBRC 14920,CIP 107756,CCUG 56031

@ref 20215

Last LPSN update 2025-12-16 09:47:26

Domain Pseudomonadati

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Comamonadaceae

Genus Hylemonella

Species Hylemonella gracilis

Full scientific name Hylemonella gracilis (Canale-Parola et al. 1966) Spring et al. 2004

Synonyms (2)

Aquaspirillum gracile
"Spirillum gracile"

BacDive ID	Other strains from **Hylemonella gracilis** (11)	Type strain
155084	H. gracilis CCUG 56419
161904	H. gracilis JCM 17030
161905	H. gracilis JCM 17031
161906	H. gracilis JCM 17032
161907	H. gracilis JCM 17036
161948	H. gracilis JCM 17153
161949	H. gracilis JCM 17154
161950	H. gracilis JCM 17155
161951	H. gracilis JCM 17156
161952	H. gracilis JCM 17157
161962	H. gracilis JCM 17192

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
119719	negative	rod-shaped
125439	negative		99.5
125438	negative		98

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
3494	SPIRILLUM GRACILE MEDIUM (DSMZ Medium 654)	Medium recipe at MediaDive	Name: SPIRILLUM GRACILE MEDIUM (DSMZ Medium 654) Composition: Agar 15.0 g/l Peptone 5.0 g/l Yeast extract 0.5 g/l K2HPO4 0.1 g/l Tween 80 0.02 g/l Tap water
36635	MEDIUM 14 - Williams and Rittenberg medium for Aquaspirillum genus		Distilled water make up to (1000.000 ml);Agar (13.000 g);Yeast extract (3.000 g);Peptone (5.000 g);Beef extract (3.000 g)
119719	CIP Medium 14	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
3494	positive	growth	30	mesophilic
36635	positive	growth	30	mesophilic
119719	positive	growth	22-37
119719	negative	growth	5
119719	negative	growth	15
119719	negative	growth	41

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		99.4
125438		92.351

Halophily

@ref	Salt	Growth	Tested relation	Concentration
119719	NaCl	positive	growth	0 %
119719	NaCl		growth	2 %
119719	NaCl		growth	4 %
119719	NaCl		growth	6 %
119719	NaCl		growth	8 %
119719	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
119719	16947 ChEBI	citrate	-	carbon source
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	-	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
119719	4853 ChEBI	esculin	-	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
119719	17234 ChEBI	glucose	-	fermentation
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
119719	17716 ChEBI	lactose	-	fermentation
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
119719	17632 ChEBI	nitrate	-	reduction
119719	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
119719	132112 ChEBI	sodium thiosulfate	-	builds gas from
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is antibiotic	Is sensitive	Is resistant
119719	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
119719	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
119719	15688 ChEBI	acetoin	-
119719	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
119719	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
119719	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
119719	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
119719	gamma-glutamyltransferase	-	2.3.2.2
119719	gelatinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
119719	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
119719	ornithine decarboxylase	-	4.1.1.17
119719	oxidase	+
119719	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	-	3.4.21.4	from API zym
119719	tryptophan deaminase	-
119719	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	valine metabolism	100	9 of 9
66794	cyanate degradation	100	3 of 3
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	denitrification	100	2 of 2
66794	coenzyme A metabolism	100	4 of 4
66794	formaldehyde oxidation	100	3 of 3
66794	molybdenum cofactor biosynthesis	100	9 of 9
66794	gallate degradation	100	5 of 5
66794	adipate degradation	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	taurine degradation	100	1 of 1
66794	ethanol fermentation	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	palmitate biosynthesis	100	22 of 22
66794	phenylalanine metabolism	92.31	12 of 13
66794	Entner Doudoroff pathway	90	9 of 10
66794	threonine metabolism	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	reductive acetyl coenzyme A pathway	85.71	6 of 7
66794	photosynthesis	85.71	12 of 14
66794	heme metabolism	85.71	12 of 14
66794	vitamin B12 metabolism	85.29	29 of 34
66794	leucine metabolism	84.62	11 of 13
66794	vitamin B1 metabolism	84.62	11 of 13
66794	glycolate and glyoxylate degradation	83.33	5 of 6
66794	proline metabolism	81.82	9 of 11
66794	purine metabolism	80.85	76 of 94
66794	3-chlorocatechol degradation	80	4 of 5
66794	methylglyoxal degradation	80	4 of 5
66794	peptidoglycan biosynthesis	80	12 of 15
66794	phenylacetate degradation (aerobic)	80	4 of 5
66794	glutamate and glutamine metabolism	78.57	22 of 28
66794	tetrahydrofolate metabolism	78.57	11 of 14
66794	d-mannose degradation	77.78	7 of 9
66794	lipid A biosynthesis	77.78	7 of 9
66794	serine metabolism	77.78	7 of 9
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	methionine metabolism	76.92	20 of 26
66794	histidine metabolism	75.86	22 of 29
66794	acetate fermentation	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	C4 and CAM-carbon fixation	75	6 of 8
66794	CMP-KDO biosynthesis	75	3 of 4
66794	ketogluconate metabolism	75	6 of 8
66794	gluconeogenesis	75	6 of 8
66794	isoleucine metabolism	75	6 of 8
66794	sulfopterin metabolism	75	3 of 4
66794	pyrimidine metabolism	73.33	33 of 45
66794	flavin biosynthesis	73.33	11 of 15
66794	vitamin B6 metabolism	72.73	8 of 11
66794	pentose phosphate pathway	72.73	8 of 11
66794	alanine metabolism	72.41	21 of 29
66794	NAD metabolism	72.22	13 of 18
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	tyrosine metabolism	71.43	10 of 14
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	citric acid cycle	71.43	10 of 14
66794	tryptophan metabolism	71.05	27 of 38
66794	propionate fermentation	70	7 of 10
66794	urea cycle	69.23	9 of 13
66794	IAA biosynthesis	66.67	2 of 3
66794	4-hydroxymandelate degradation	66.67	6 of 9
66794	nitrate assimilation	66.67	6 of 9
66794	arginine metabolism	66.67	16 of 24
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	allantoin degradation	66.67	6 of 9
66794	3-phenylpropionate degradation	66.67	10 of 15
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	degradation of aromatic, nitrogen containing compounds	66.67	8 of 12
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	methane metabolism	66.67	2 of 3
66794	glycolysis	64.71	11 of 17
66794	lipid metabolism	64.52	20 of 31
66794	glutathione metabolism	64.29	9 of 14
66794	degradation of sugar acids	64	16 of 25
66794	oxidative phosphorylation	63.74	58 of 91
66794	non-pathway related	63.16	24 of 38
66794	dTDPLrhamnose biosynthesis	62.5	5 of 8
66794	isoprenoid biosynthesis	61.54	16 of 26
66794	cysteine metabolism	61.11	11 of 18
66794	vitamin K metabolism	60	3 of 5
66794	creatinine degradation	60	3 of 5
66794	4-hydroxyphenylacetate degradation	60	6 of 10
66794	cellulose degradation	60	3 of 5
66794	glycine betaine biosynthesis	60	3 of 5
66794	lipoate biosynthesis	60	3 of 5
66794	propanol degradation	57.14	4 of 7
66794	lysine metabolism	54.76	23 of 42
66794	degradation of pentoses	53.57	15 of 28
66794	biotin biosynthesis	50	2 of 4
66794	pantothenate biosynthesis	50	3 of 6
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	ribulose monophosphate pathway	50	1 of 2
66794	glycine metabolism	50	5 of 10
66794	cyclohexanol degradation	50	2 of 4
66794	butanoate fermentation	50	2 of 4
66794	kanosamine biosynthesis II	50	1 of 2
66794	quinate degradation	50	1 of 2
66794	phenol degradation	50	10 of 20
66794	resorcinol degradation	50	1 of 2
66794	polyamine pathway	47.83	11 of 23
66794	androgen and estrogen metabolism	43.75	7 of 16
66794	benzoyl-CoA degradation	42.86	3 of 7
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	coenzyme M biosynthesis	40	4 of 10
66794	glycogen metabolism	40	2 of 5
66794	hydrogen production	40	2 of 5
66794	sulfate reduction	38.46	5 of 13
66794	carnitine metabolism	37.5	3 of 8
66794	d-xylose degradation	36.36	4 of 11
66794	ascorbate metabolism	36.36	8 of 22
66794	cholesterol biosynthesis	36.36	4 of 11
66794	degradation of hexoses	33.33	6 of 18
66794	sphingosine metabolism	33.33	2 of 6
66794	enterobactin biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	sulfoquinovose degradation	33.33	1 of 3
66794	starch degradation	30	3 of 10
66794	chlorophyll metabolism	27.78	5 of 18
66794	arachidonic acid metabolism	27.78	5 of 18
66794	carotenoid biosynthesis	27.27	6 of 22
66794	metabolism of disaccharids	27.27	3 of 11
66794	degradation of sugar alcohols	25	4 of 16
66794	toluene degradation	25	1 of 4
66794	lactate fermentation	25	1 of 4
66794	glycogen biosynthesis	25	1 of 4
66794	bile acid biosynthesis, neutral pathway	23.53	4 of 17
66794	phosphatidylethanolamine bioynthesis	23.08	3 of 13

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119719	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
119719	not determinedn.d.	-	-	-	+/-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+/-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Pond (small)

Isolation

@ref	Sample type
3494	pondwater
60833	Pondwater
119719	Environment, Pondwater

Taxonmaps

69479

Global distribution of 16S sequence AF078753 (>99% sequence identity) for Hylemonella gracilis subclade from Microbeatlas

Aquatic Samples	4404
Soil Samples	1556
Animal Samples	993
Plant Samples	608
Total Samples	7561

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
3494	1	Risk group (German classification) According to TRBA 466
119719	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM21183v1 assembly for Hylemonella gracilis ATCC 19624	contig	GCA_000211835	887062.3	651324043	887062	56.23

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Aquaspirillum gracile 16S ribosomal RNA gene, partial sequence	AF078753	1487		887062
20218	Hylemonella gracilis gene for 16S rRNA, partial sequence, strain: NBRC 14920	AB680706	1449		80880

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Hylemonella gracilis ATCC 19624
NCBI: GCA_000211835

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.40	no
125439	motility	BacteriaNetⓘ	yes	83.00	no
125439	gram_stain	BacteriaNetⓘ	negative	99.50	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	84.70	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Hylemonella gracilis ATCC 19624
PATRIC: 887062.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.00	no
125438	anaerobic	anaerobicⓘ	no	93.93	no
125438	aerobic	aerobicⓘ	yes	85.68	no
125438	spore-forming	spore-formingⓘ	no	92.35	no
125438	thermophilic	thermophileⓘ	no	93.66	no
125438	flagellated	motile2+ⓘ	yes	78.98	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Identification and characterization of the proteolytic flagellin from the common freshwater bacterium Hylemonella gracilis.	Eckhard U, Blochl C, Jenkins BGL, Mansfield MJ, Huber CG, Doxey AC, Brandstetter H.	Sci Rep	10.1038/s41598-020-76010-8	2020
	Cellulose-mediated floc formation by the activated sludge bacterium Shinella zoogloeoides ATCC 19623.	Gao N, Dai J, Liu Y, Li S, Wang J, Lu W, Qiu D.	BMC Microbiol	10.1186/s12866-022-02516-y	2022
	Structure of the O-polysaccharides of the lipopolysaccharides of Mesorhizobium loti HAMBI 1148 and Mesorhizobium amorphae ATCC 19655 containing two O-methylated monosaccharides.	Zdorovenko EL, Valueva OA, Kachala VV, Shashkov AS, Kocharova NA, Knirel YA, Kutkowska J, Turska-Szewczuk A, Urbanik-Sypniewska T, Choma A, Russa R.	Carbohydr Res	10.1016/j.carres.2009.08.040	2009
	In situ imaging of bacterial outer membrane projections and associated protein complexes using electron cryo-tomography.	Kaplan M, Chreifi G, Metskas LA, Liedtke J, Wood CR, Oikonomou CM, Nicolas WJ, Subramanian P, Zacharoff LA, Wang Y, Chang YW, Beeby M, Dobro MJ, Zhu Y, McBride MJ, Briegel A, Shaffer CL, Jensen GJ.	Elife	10.7554/elife.73099	2021
	De Novo Structural Pattern Mining in Cellular Electron Cryotomograms.	Xu M, Singla J, Tocheva EI, Chang YW, Stevens RC, Jensen GJ, Alber F.	Structure	10.1016/j.str.2019.01.005	2019
Genetics	Comparative genomics of Campylobacter concisus: Analysis of clinical strains reveals genome diversity and pathogenic potential.	Gemmell MR, Berry S, Mukhopadhya I, Hansen R, Nielsen HL, Bajaj-Elliott M, Nielsen H, Hold GL.	Emerg Microbes Infect	10.1038/s41426-018-0118-x	2018
	High correlation between genotypes and phenotypes of environmental bacteria Comamonas testosteroni strains.	Liu L, Zhu W, Cao Z, Xu B, Wang G, Luo M.	BMC Genomics	10.1186/s12864-015-1314-x	2015
Enzymology	Biodiversity and phylogenetic analysis of culturable bacteria indigenous to Khewra salt mine of pakistan and their industrial importance.	Akhtar N, Ghauri MA, Iqbal A, Anwar MA, Akhtar K.	Braz J Microbiol	10.1590/s1517-838220080001000029	2008
Metabolism	Structural diversity of bacterial flagellar motors.	Chen S, Beeby M, Murphy GE, Leadbetter JR, Hendrixson DR, Briegel A, Li Z, Shi J, Tocheva EI, Muller A, Dobro MJ, Jensen GJ.	EMBO J	10.1038/emboj.2011.186	2011
Metabolism	Microbiological oxidation of antimony(III) with oxygen or nitrate by bacteria isolated from contaminated mine sediments.	Terry LR, Kulp TR, Wiatrowski H, Miller LG, Oremland RS.	Appl Environ Microbiol	10.1128/aem.01970-15	2015
Metabolism	Sugar catabolism in Aquaspirillum gracile.	Laughon BE, Krieg NR	J Bacteriol	10.1128/jb.119.3.691-697.1974	1974
Phylogeny	Ottowia thiooxydans gen. nov., sp. nov., a novel facultatively anaerobic, N2O-producing bacterium isolated from activated sludge, and transfer of Aquaspirillum gracile to Hylemonella gracilis gen. nov., comb. nov.	Spring S, Jackel U, Wagner M, Kampfer P	Int J Syst Evol Microbiol	10.1099/ijs.0.02727-0	2004

References

#3494	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 9158
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#36635	; Curators of the CIP;
#60833	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56031
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#119719	Collection of Institut Pasteur ; Curators of the CIP; CIP 107756
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Hylemonella gracilis (DSM 9158, ATCC 19624, CCUG 56031)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

API zym

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000211835

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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