Name: Giesbergeria sinuosa DSM 11556
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2959

Type strain:

Species: Giesbergeria sinuosa

Culture col. no.: DSM 11556, ATCC 9786, NCIB 9010, NRRL B-2065, CCUG 49452, IAM 14978, LMG 4393, JCM 21449, CIP 63.18, IFO 14925, NBRC 14925, NCIMB 9010, NCMB 59, CCUG 13728, NRRL: B-2065

Strain history: CIP <- 1963, NCIB <- M.A. Williams, Spirillum sinuosum

NCBI tax ID(s): 80883 (species)

SI-ID 909

LMG 4393, ATCC 9786, CCUG 13728, LMG 4347, NCIB 9010, NCMB 59, DSM 11556, NCIMB 9010, IFO 14925, NBRC 14925, CCUG 49452, IAM 14978, JCM 21449, NRRL B-2065, CIP 63.18

Section

Giesbergeria sinuosa DSM 11556 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from Environment, Fresh water.

Gram-negative
motile
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Comamonadaceae*
	Genus	*Giesbergeria*
	Species	**Giesbergeria sinuosa**
	Full Scientific Name (LPSN)	Giesbergeria sinuosa (Williams and Rittenberg 1957) Grabovich et al. 2006

	Synonym	Aquaspirillum sinuosum
	Synonym	"Spirillum* sinuosum"*

Information on morphological and physiological properties Morphology

[Ref.: #122635]	Gram stain	negative

[Ref.: #122635]	Cell shape	rod-shaped

[Ref.: #122635]	Motility	yes

[Ref.: #58563]

Incubation period

3 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4418]

Culture medium

ANCYLOBACTER - SPIROSOMA MEDIUM (DSMZ Medium 7)

[Ref.: #4418]

Culture medium growth

[Ref.: #4418]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4418]

Culture medium composition

expand / minimize

[Ref.: #4418]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #4418]

Culture medium growth

[Ref.: #4418]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4418]

Culture medium composition

expand / minimize

[Ref.: #37609]

Culture medium

MEDIUM 14 - Williams and Rittenberg medium for Aquaspirillum genus

[Ref.: #37609]

Culture medium growth

[Ref.: #37609]

Culture medium composition

expand / minimize

[Ref.: #122635]

Culture medium

CIP Medium 14

[Ref.: #122635]

Culture medium growth

[Ref.: #122635]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #4418]		growth	30 °C
[Ref.: #37609]		growth	25 °C
[Ref.: #58563]		growth	30 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #122635]		growth	15-30 °C
[Ref.: #122635]	no	growth	5 °C
[Ref.: #122635]	no	growth	37 °C
[Ref.: #122635]	no	growth	41 °C

[Ref.: #4418]	Temperature range	mesophilic
[Ref.: #37609]	Temperature range	mesophilic
[Ref.: #58563]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #122635]	Temperature range	psychrophilic
[Ref.: #122635]	Temperature range	mesophilic
[Ref.: #122635]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #58563]

Oxygen tolerance

aerobe

	Salt	Tested relation		Salt conc.
[Ref.: #122635]	NaCl		growth	0	%
[Ref.: #122635]	NaCl	no	growth	2	%
[Ref.: #122635]	NaCl	no	growth	4	%
[Ref.: #122635]	NaCl	no	growth	6	%
[Ref.: #122635]	NaCl	no	growth	8	%
[Ref.: #122635]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #122635]	citrate ChEBI	-	carbon source
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-glucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #122635]	esculin ChEBI	-	hydrolysis
[Ref.: #68371]	esculin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #122635]	glucose ChEBI	-	fermentation
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #122635]	lactose ChEBI	-	fermentation
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	maltose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #122635]	nitrate ChEBI	-	reduction
[Ref.: #122635]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #122635]	sodium thiosulfate ChEBI	-	builds gas from
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #122635]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #122635]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #122635]		acetoin ChEBI	-
[Ref.: #122635]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #122635]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #122635]	amylase	-
[Ref.: #122635]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #122635]	caseinase	-	3.4.21.50
[Ref.: #122635]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #122635]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #122635]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #122635]	gelatinase	-
[Ref.: #122635]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #122635]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #122635]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #122635]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #122635]	oxidase	+
[Ref.: #122635]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #122635]	protease	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #122635]	tryptophan deaminase	-
[Ref.: #122635]	tween esterase	-
[Ref.: #122635]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #122635]	12018	not determinedn.d.	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+/-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #122635]	13032	-	+	+	-	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #122635]	Sample type/isolated from	Environment, Fresh water
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AF078754 (>99% sequence identity) for Giesbergeria from Microbeatlas

Aquatic Samples	272
Soil Samples	10
Animal Samples	29
Plant Samples	7
Total Samples	318

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4418]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #122635]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Aquaspirillum sinuosum 16S ribosomal RNA gene, partial sequence	AF078754	1491	ENA	80883 tax ID	*
[Ref.: #20218]	Giesbergeria sinuosa gene for 16S rRNA, partial sequence, strain: NBRC 14925	AB680711	1458	ENA	80883 tax ID	*

Availability in culture collections External links

[Ref.: #4418]

Culture collection no.

DSM 11556, ATCC 9786, NCIB 9010, NRRL B-2065, CCUG 49452, IAM 14978, LMG 4393, JCM 21449, CIP 63.18, IFO 14925, NBRC 14925, NCIMB 9010, NCMB 59, CCUG 13728, NRRL: B-2065

[Ref.: #72481]

SI-ID 909

References

#4418

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11556

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#37609 ; Curators of the CIP;
#58563 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 49452
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#72481

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID909.1 )

#122635 Collection of Institut Pasteur ; Curators of the CIP; CIP 63.18
* These data were automatically processed and therefore are not curated

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