Name: Curvibacter delicatus 146
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 2939

Type strain:

Species: Curvibacter delicatus

Strain Designation: 146

Culture col. no.: DSM 11558, ATCC 14667, CCUG 15846, LMG 4328, LMG 4327, IAM 14955, NBRC 14919, JCM 15147, BCRC 80545, IFO 14919, JCM 21432, CIP 107314, NCIMB 9419

Strain history: CIP <- 2001, NCIMB <- ATCC <- E. Leifson, Spirillum delicatum: strain 146

NCBI tax ID(s): 1349763 (strain), 80879 (species)

SI-ID 10236

LMG 4328, ATCC 14667, CCUG 15846, LMG 4327, NCIB 9419, NCIMB 9419, DSM 11558, IFO 14919, IAM 14955, CIP 107314, NBRC 14919, JCM 21432, JCM 15147

Special Collections

Section

Curvibacter delicatus 146 is an aerobe, mesophilic, Gram-positive bacterium that was isolated from distilled water.

Gram-positive
motile
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Comamonadaceae*
	Genus	*Curvibacter*
	Species	**Curvibacter delicatus**
	Full Scientific Name (LPSN)	Curvibacter delicatus (Leifson 1962) Ding and Yokota 2004

	Synonym	Aquaspirillum delicatum
	Synonym	"Spirillum* delicatum"*

Information on morphological and physiological properties Morphology

[Ref.: #118886]	Gram stain	positive
[Ref.: #69480]	Gram stain	negative Confidence in %97.5

[Ref.: #118886]	Motility	yes

[Ref.: #46362]

Incubation period

3 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4420]

Culture medium

HETEROTROPHIC MEDIUM H3P (DSMZ Medium 428)

[Ref.: #4420]

Culture medium growth

[Ref.: #4420]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4420]

Culture medium composition

expand / minimize

[Ref.: #4420]

Culture medium

SPIRILLUM MEDIUM (DSMZ Medium 37)

[Ref.: #4420]

Culture medium growth

[Ref.: #4420]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4420]

Culture medium composition

expand / minimize

[Ref.: #33763]

Culture medium

MEDIUM 14 - Williams and Rittenberg medium for Aquaspirillum genus

[Ref.: #33763]

Culture medium growth

[Ref.: #33763]

Culture medium composition

expand / minimize

[Ref.: #118886]

Culture medium

CIP Medium 14

[Ref.: #118886]

Culture medium growth

[Ref.: #118886]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #118886]

Culture medium

CIP Medium 72

[Ref.: #118886]

Culture medium growth

[Ref.: #118886]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #4420]		growth	30 °C
[Ref.: #33763]		growth	25 °C
[Ref.: #46362]		growth	30 °C
[Ref.: #67770]		growth	25 °C
[Ref.: #118886]		growth	22-37 °C
[Ref.: #118886]	no	growth	5 °C
[Ref.: #118886]	no	growth	15 °C
[Ref.: #118886]	no	growth	41 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #46362]

Oxygen tolerance

aerobe

[Ref.: #69481]

Ability of spore formation

no Confidence in %100

	Salt	Tested relation		Salt conc.
[Ref.: #118886]	NaCl		growth	0	%
[Ref.: #118886]	NaCl	no	growth	2	%
[Ref.: #118886]	NaCl	no	growth	4	%
[Ref.: #118886]	NaCl	no	growth	6	%
[Ref.: #118886]	NaCl	no	growth	8	%
[Ref.: #118886]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #118886]	citrate ChEBI	-	carbon source
[Ref.: #118886]	esculin ChEBI	-	hydrolysis
[Ref.: #118886]	glucose ChEBI	-	fermentation
[Ref.: #118886]	glucose ChEBI	-	degradation
[Ref.: #118886]	lactose ChEBI	-	fermentation
[Ref.: #118886]	nitrate ChEBI	+	reduction
[Ref.: #118886]	nitrite ChEBI	-	reduction
[Ref.: #118886]	sodium thiosulfate ChEBI	-	builds gas from

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #118886]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite production	Metabolite	Production
[Ref.: #118886]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #118886]		acetoin ChEBI	-
[Ref.: #118886]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #118886]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #118886]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #118886]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #118886]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #118886]	gelatinase	-
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #118886]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #118886]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #118886]	oxidase	-
[Ref.: #118886]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #118886]	tryptophan deaminase	-
[Ref.: #118886]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #118886]	10253	-	+	+	+	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4420]	Sample type/isolated from	distilled water
[Ref.: #4420]	Geographic location (country and/or sea, region)	California
[Ref.: #4420]	Country	USA
[Ref.: #4420]	Country ISO 3 Code	USA
[Ref.: #4420]	Continent	North America

[Ref.: #46362]	Sample type/isolated from	Water,distilled
[Ref.: #46362]	Geographic location (country and/or sea, region)	California,Davis
[Ref.: #46362]	Country	USA
[Ref.: #46362]	Country ISO 3 Code	USA
[Ref.: #46362]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Distilled water
[Ref.: #67770]	Geographic location (country and/or sea, region)	CA
[Ref.: #67770]	Country	USA
[Ref.: #67770]	Country ISO 3 Code	USA
[Ref.: #67770]	Continent	North America

[Ref.: #118886]	Sample type/isolated from	Environment, Distilled water sample
[Ref.: #118886]	Geographic location (country and/or sea, region)	California
[Ref.: #118886]	Country	United States of America
[Ref.: #118886]	Country ISO 3 Code	USA
[Ref.: #118886]	Continent	North America
[Ref.: #118886]	Isolation date	1959
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	-
#Engineered	#Industrial	#Engineered product
#Engineered	#Treatment	#Sterilized (Desinfected)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF078756 (>99% sequence identity) for Rhodoferax from Microbeatlas

Aquatic Samples	471
Soil Samples	84
Animal Samples	107
Plant Samples	31
Total Samples	693

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4420]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #118886]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Aquaspirillum delicatum 16S ribosomal RNA gene, partial sequence	AF078756	1495	GenBank ENA	80879 tax ID	*
[Ref.: #20218]	Curvibacter delicatus gene for 16S rRNA, partial sequence, strain: NBRC 14919	AB680705	1460	GenBank ENA	80879 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Curvibacter delicatus NBRC 14919	GCA_001592265	contig	GenBank ENA	1349763 tax ID
[Ref.: #66792]	Curvibacter delicatus NBRC 14919	1349763.3	wgs	PATRIC	1349763 tax ID	*
[Ref.: #66792]	Curvibacter delicatus NBRC 14919	2731957686	draft	JGI IMG/M	1349763 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Curvibacter delicatus NBRC 14919 PATRIC: 1349763.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Curvibacter delicatus NBRC 14919 PATRIC: 1349763.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	97.5	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	89.215	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	87.825	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	74.803	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	95.274	no
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	79.336	no

Availability in culture collections External links

[Ref.: #4420]

Culture collection no.

DSM 11558, ATCC 14667, CCUG 15846, LMG 4328, LMG 4327, IAM 14955, NBRC 14919, JCM 15147, BCRC 80545, IFO 14919, JCM 21432, CIP 107314, NCIMB 9419

[Ref.: #72461]

SI-ID 10236

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Caenimonas terrae sp. nov., isolated from a soil sample in Korea, and emended description of the genus Caenimonas Ryu et al. 2008.	Kim SJ, Weon HY, Kim YS, Moon JY, Seok SJ, Hong SB, Kwon SW	J Microbiol	10.1007/s12275-012-1587-6	2012	*
Phylogeny	Limnohabitans curvus gen. nov., sp. nov., a planktonic bacterium isolated from a freshwater lake.	Hahn MW, Kasalicky V, Jezbera J, Brandt U, Jezberova J, Simek K	Int J Syst Evol Microbiol	10.1099/ijs.0.013292-0	2009	*

References

#4420

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11558

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#33763 ; Curators of the CIP;
#46362 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 15846

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#72461

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID10236.1 )

#118886 Collection of Institut Pasteur ; Curators of the CIP; CIP 107314
* These data were automatically processed and therefore are not curated

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Curvibacter delicatus NBRC 14919

Curvibacter delicatus NBRC 14919

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