Comamonas testosteroni (DSM 50244, ATCC 11996, ICPB 2741-78)

Name: Comamonas testosteroni (DSM 50244, ATCC 11996, ICPB 2741-78)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2923

Type strain

Culture col. no. DSM 50244 ATCC 11996 ICPB 2741-78 NCIB 8955 CCUG 1426 23 more

NCBI tax ID(s) 1009852 285

Special Collections DSMZ CCUG JCM KCTC CIP

History DSMZ <- ICPB <- P. Talalay JCM <-- Y. Kosako 85013 <-- Nissui Pharm. Co., Ltd. <-- ATCC 11996 <-- P. Talalay. CIP <- 1959, NCIB <- 1958, ATCC <- P. Talalay, Pseudomonas testosteroni

Links

Comamonas testosteroni DSM 50244 is a bacterium that was isolated from soil, enrichment with testosterone.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 2054

LMG 1800,ATCC 11996,CCM 1931,CCUG 1426,CCUG 1827,CCUG 1841,CCUG 2026,CECT 326,JCM 5832,LMG 1786,NCIB 8955,NCPPB 1969,NCTC 10698,NRRL B-2611,CCRC 14822,IAM 12419,IFO 14951,NCIMB 8955,JCM 6221,VTT E-86249,CIP 59.24,LMD 86.53,KCTC 1772,KCTC 2990,NBRC 14951,NCCB 86053,CFBP 2436,HAMBI 403,NCAIM B.01655,BCRC 11023,CCRC 11023,BCRC 14822,CCT 2555,KCTC 12347,NCAIM B.01926,CDBB 102,VKM B-1241,DSM 50244

@ref 20215

Last LPSN update 2026-05-29 08:25:35

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Comamonadaceae

Genus Comamonas

Species Comamonas testosteroni

Full scientific name Comamonas testosteroni (Marcus and Talalay 1956) Tamaoka et al. 1987

Synonyms (1)

Pseudomonas testosteroni

BacDive ID	Other strains from **Comamonas testosteroni** (37)	Type strain
2910	C. testosteroni R-10-Z, DSM 1455, IAM 1152, JCM 20077, ATCC ...
2911	C. testosteroni 11, DSM 1622
2912	C. testosteroni DSM 38, ATCC 17454, NCIB 8893, JCM 6223, ...
2913	C. testosteroni T-2, DSM 6577
2914	C. testosteroni 31A, DSM 6781
2915	C. testosteroni RW31, DSM 7300
2916	C. testosteroni PSB-4, DSM 11414
2917	C. testosteroni wtT-2, DSM 12678
2918	C. testosteroni KF1, DSM 14576
2919	C. testosteroni SPB-2, DSM 14802
2920	C. testosteroni N, DSM 30032, ATCC 25094
2921	C. testosteroni 31, DSM 50241, ATCC 15666, ICPB 2738-16, ...
2922	C. testosteroni DSM 50242, ATCC 17407, ICPB 2739-25
23869	C. testosteroni DSM 50429, ATCC 14836, ICPB 2882, NRRL B-963
137962	C. testosteroni 292-86, CIP 102318
138173	C. testosteroni FD-30, CIP 105116, CCUG 14480, ATCC 17510, ...
141203	C. testosteroni CCUG 178 A
141361	C. testosteroni CCUG 1188
142853	C. testosteroni CCUG 15339, ATCC 17409, LMG 1788, JCM 6222, ...
152763	C. testosteroni CCUG 47564
155708	C. testosteroni CCUG 59100
160885	C. testosteroni JCM 10170
161299	C. testosteroni JCM 13048, ATCC 15667, CCUG 14479, IAM 12408, ...
162570	C. testosteroni JCM 19603, NBRC 109938
162958	C. testosteroni JCM 20558, ATCC 15667, CCUG 14479, IAM 12408, ...
165359	C. testosteroni JCM 6204, BCRC 10956, IAM 1048, IFO 12047, ...
165360	C. testosteroni JCM 6205, IAM 1123
165361	C. testosteroni JCM 6206, IAM 1176, IAM 14425
165363	C. testosteroni JCM 6209, IAM 14424
165364	C. testosteroni JCM 6210
165372	C. testosteroni JCM 6225, IAM 14427
165373	C. testosteroni JCM 6226, IAM 14428
165374	C. testosteroni JCM 6227, IAM 14429
165375	C. testosteroni JCM 6228, IAM 14430
165376	C. testosteroni JCM 6229, IAM 14431
165377	C. testosteroni JCM 6231
165379	C. testosteroni JCM 6233

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	98.5
125439	negative	99.418

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
12682	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
37573	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
123485	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
12682	positive	growth	30
37573	positive	growth	30
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	92.636

Spore formation

@ref	Spore formation	Confidence
125438		90.298
125439		99.713

Compound production

@ref	Compound
12682	ß lactamase
12682	9-alpha hydroxysteroid dehydrogenase
12682	ß hydroxysteroid dehydrogenase

Observation

67770

Observationquinones: Q-8

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	+	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
12682	+	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	+	+	-	+
12682	+	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	+	+	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
12682	soil, enrichment with testosterone	Berkeley	USA	USA	North America
44373	Soil,enrichment with testosterone
67770	Soil
123485	Environment, Soil	Berkeley, California	United States of America	USA	North America

Taxonmaps

69479

Global distribution of 16S sequence EU024141 (>99% sequence identity) for Comamonas from Microbeatlas

Aquatic Samples	17183
Soil Samples	5571
Animal Samples	18603
Plant Samples	3851
Total Samples	45208

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
12682	yes, in single cases	1	Risk group (German classification) According to TRBA 466
123485		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	51108_F01 assembly for Comamonas testosteroni NCTC10698	contig	GCA_900461225	285.64	8115175385	285	77.05
67770	ASM24152v2 assembly for Comamonas testosteroni ATCC 11996	contig	GCA_000241525	1009852.3	2529292992	1009852	66.59
67770	ASM74003v1 assembly for Comamonas testosteroni NBRC 14951	contig	GCA_000740035	285.47	2617271275	285	66.13
66792	B337 assembly for Comamonas testosteroni ATCC 11996	scaffold	GCA_903797675	1009852.10	8119139274	1009852	62.64

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Pseudomonas testosteroni 16S rRNA gene	M11224	1536	285
20218	Comamonas testosteroni strain BCRC 14822 16S-23S ribosomal RNA intergenic spacer, complete sequence	EU014531	759	285
20218	Comamonas testosteroni strain LMG 1800 16S ribosomal RNA gene, partial sequence	EU024141	1317	1009852
20218	Comamonas testosteroni gene for 16S rRNA, partial sequence, strain: NBRC 14951	AB680720	1458	285
124043	Comamonas testosteroni partial 16S rRNA gene, strain HAMBI 403	LT899938	1502	285
124043	Comamonas testosteroni strain ATCC 11996 16S ribosomal RNA gene, partial sequence.	OR660671	1475	285

GC content

@ref	GC-content (mol%)	Method
12682	62.5
67770	61.5	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: 51108_F01 assembly for Comamonas testosteroni NCTC10698
BV-BRC: 285.64

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	92.64	no
125439	gram_stain	BacteriaNetⓘ	negative	99.42	no
125439	motility	BacteriaNetⓘ	yes	87.69	no
125439	spore_formation	BacteriaNetⓘ	no	99.71	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Comamonas testosteroni ATCC 11996 4
NCBI: GCA_903797675.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.50	no
125438	anaerobic	anaerobicⓘ	no	96.65	no
125438	aerobic	aerobicⓘ	yes	84.03	no
125438	spore-forming	spore-formingⓘ	no	90.30	no
125438	thermophilic	thermophileⓘ	no	99.47	yes
125438	flagellated	motile2+ⓘ	yes	84.24	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Microbial degradation of steroid sex hormones: implications for environmental and ecological studies.	Chiang YR, Wei ST, Wang PH, Wu PH, Yu CP.	Microb Biotechnol	10.1111/1751-7915.13504	2020
Enzymology	Design and evaluation of 16S rRNA sequence based oligonucleotide probes for the detection and quantification of Comamonas testosteroni in mixed microbial communities.	Bathe S, Hausner M.	BMC Microbiol	10.1186/1471-2180-6-54	2006
Enzymology	Comprehensive Laboratory Evaluation of a Specific Lateral Flow Assay for the Presumptive Identification of Francisella tularensis in Suspicious White Powders and Aerosol Samples.	Pillai SP, DePalma L, Prentice KW, Ramage JG, Chapman C, Sarwar J, Parameswaran N, Petersen J, Yockey B, Young J, Singh A, Pillai CA, Manickam G, Thirunavkkarasu N, Avila JR, Sharma S, Morse SA, Venkateswaran K, Anderson K, Hodge DR.	Health Secur	10.1089/hs.2019.0151	2020
Pathogenicity	Wohlfahrtiimonas chitiniclastica: current insights into an emerging human pathogen.	Schrottner P, Rudolph WW, Damme U, Lotz C, Jacobs E, Gunzer F.	Epidemiol Infect	10.1017/s0950268816003411	2017
Metabolism	A novel outer-membrane anion channel (porin) as part of a putatively two-component transport system for 4-toluenesulphonate in Comamonas testosteroni T-2.	Mampel J, Maier E, Tralau T, Ruff J, Benz R, Cook AM.	Biochem J	10.1042/bj20040652	2004
Enzymology	Comprehensive Laboratory Evaluation of a Highly Specific Lateral Flow Assay for the Presumptive Identification of Bacillus anthracis Spores in Suspicious White Powders and Environmental Samples.	Ramage JG, Prentice KW, DePalma L, Venkateswaran KS, Chivukula S, Chapman C, Bell M, Datta S, Singh A, Hoffmaster A, Sarwar J, Parameswaran N, Joshi M, Thirunavkkarasu N, Krishnan V, Morse S, Avila JR, Sharma S, Estacio PL, Stanker L, Hodge DR, Pillai SP.	Health Secur	10.1089/hs.2016.0041	2016
Metabolism	Conjugative plasmids and the degradation of arylsulfonates in Comamonas testosteroni.	Junker F, Cook AM.	Appl Environ Microbiol	10.1128/aem.63.6.2403-2410.1997	1997
Metabolism	Enumeration and detection of anaerobic ferrous iron-oxidizing, nitrate-reducing bacteria from diverse European sediments.	Straub KL, Buchholz-Cleven BE.	Appl Environ Microbiol	10.1128/aem.64.12.4846-4856.1998	1998
	PCR primers to amplify 16S rRNA genes from cyanobacteria.	Nubel U, Garcia-Pichel F, Muyzer G.	Appl Environ Microbiol	10.1128/aem.63.8.3327-3332.1997	1997
	Application of antisera raised against sulfate-reducing bacteria for indirect immunofluorescent detection of immunoreactive bacteria in sediment from the German Baltic Sea.	Lillebaek R.	Appl Environ Microbiol	10.1128/aem.61.9.3436-3442.1995	1995
Metabolism	Degradative capacities and 16S rRNA-targeted whole-cell hybridization of sulfate-reducing bacteria in an anaerobic enrichment culture utilizing alkylbenzenes from crude oil.	Rabus R, Fukui M, Wilkes H, Widdle F.	Appl Environ Microbiol	10.1128/aem.62.10.3605-3613.1996	1996
	Direct Production of Bio-Recalcitrant Carboxyl-Rich Alicyclic Molecules Evidenced in a Bacterium-Induced Steroid Degradation Experiment.	Liu Z, Cai R, Chen YL, Zhuo X, He C, Zheng Q, He D, Shi Q, Jiao N.	Microbiol Spectr	10.1128/spectrum.04693-22	2023
	Metabolic engineering of Corynebacterium glutamicum for the production of pyrone and pyridine dicarboxylic acids.	Cho JS, Luo ZW, Moon CW, Prabowo CPS, Lee SY.	Proc Natl Acad Sci U S A	10.1073/pnas.2415213121	2024
	Interspecific competition prevents the proliferation of social cheaters in an unstructured environment.	Lin H, Wang D, Wang Q, Mao J, Bai Y, Qu J.	ISME J	10.1093/ismejo/wrad038	2024
Metabolism	Steroid Degradation in Comamonas testosteroni TA441: Identification of the Entire beta-Oxidation Cycle of the Cleaved B Ring.	Horinouchi M, Koshino H, Malon M, Hirota H, Hayashi T.	Appl Environ Microbiol	10.1128/aem.01204-19	2019
	Identification and genome analysis of Comamonas testosteroni strain JLU460ET, a novel steroid-degrading bacterium.	Liu N, Shi YE, Li J, Zhu M, Zhang T.	3 Biotech	10.1007/s13205-021-02949-8	2021
	Towards high-accuracy bacterial taxonomy identification using phenotypic single-cell Raman spectroscopy data.	Li G, Wang Z, Wu C, Wang D, Han I, Lee J, Kaeli DR, Dy JG, Weinberger KQ, Gu AZ.	ISME Commun	10.1093/ismeco/ycaf015	2025
	Chemotaxis Towards Aromatic Compounds: Insights from Comamonas testosteroni.	Wang YH, Huang Z, Liu SJ.	Int J Mol Sci	10.3390/ijms20112701	2019
	Permanent draft genome sequence of Comamonas testosteroni KF-1.	Weiss M, Kesberg AI, Labutti KM, Pitluck S, Bruce D, Hauser L, Copeland A, Woyke T, Lowry S, Lucas S, Land M, Goodwin L, Kjelleberg S, Cook AM, Buhmann M, Thomas T, Schleheck D.	Stand Genomic Sci	10.4056/sigs.3847890	2013
	High correlation between genotypes and phenotypes of environmental bacteria Comamonas testosteroni strains.	Liu L, Zhu W, Cao Z, Xu B, Wang G, Luo M.	BMC Genomics	10.1186/s12864-015-1314-x	2015
Metabolism	Engineering Mycobacterium smegmatis for testosterone production.	Fernandez-Cabezon L, Galan B, Garcia JL.	Microb Biotechnol	10.1111/1751-7915.12433	2017
	Pseudomonads Rule Degradation of Polyaromatic Hydrocarbons in Aerated Sediment.	Wald J, Hroudova M, Jansa J, Vrchotova B, Macek T, Uhlik O.	Front Microbiol	10.3389/fmicb.2015.01268	2015
Metabolism	Identification of 9alpha-hydroxy-17-oxo-1,2,3,4,10,19-hexanorandrostan-5-oic acid in steroid degradation by Comamonas testosteroni TA441 and its conversion to the corresponding 6-en-5-oyl coenzyme A (CoA) involving open reading frame 28 (ORF28)- and ORF30-encoded acyl-CoA dehydrogenases.	Horinouchi M, Hayashi T, Koshino H, Malon M, Hirota H, Kudo T.	J Bacteriol	10.1128/jb.01878-14	2014
Metabolism	Estrogen Degraders and Estrogen Degradation Pathway Identified in an Activated Sludge.	Chen YL, Fu HY, Lee TH, Shih CJ, Huang L, Wang YS, Ismail W, Chiang YR.	Appl Environ Microbiol	10.1128/aem.00001-18	2018
Metabolism	Identification of Comamonas testosteroni as an androgen degrader in sewage.	Chen YL, Wang CH, Yang FC, Ismail W, Wang PH, Shih CJ, Wu YC, Chiang YR.	Sci Rep	10.1038/srep35386	2016
Metabolism	OrtSuite: from genomes to prediction of microbial interactions within targeted ecosystem processes.	Saraiva JP, Bartholomaus A, Kallies R, Gomes M, Bicalho M, Coelho Kasmanas J, Vogt C, Chatzinotas A, Stadler P, Dias O, Nunes da Rocha U.	Life Sci Alliance	10.26508/lsa.202101167	2021
Metabolism	Novel tripartite aromatic acid transporter essential for terephthalate uptake in Comamonas sp. strain E6.	Hosaka M, Kamimura N, Toribami S, Mori K, Kasai D, Fukuda M, Masai E.	Appl Environ Microbiol	10.1128/aem.01600-13	2013
Metabolism	Role of IncP-1beta plasmids pWDL7::rfp and pNB8c in chloroaniline catabolism as determined by genomic and functional analyses.	Krol JE, Penrod JT, McCaslin H, Rogers LM, Yano H, Stancik AD, Dejonghe W, Brown CJ, Parales RE, Wuertz S, Top EM.	Appl Environ Microbiol	10.1128/aem.07480-11	2012
Metabolism	TeiR, a LuxR-type transcription factor required for testosterone degradation in Comamonas testosteroni.	Pruneda-Paz JL, Linares M, Cabrera JE, Genti-Raimondi S.	J Bacteriol	10.1128/jb.186.5.1430-1437.2004	2004
Metabolism	D-lysine production from L-lysine by successive chemical racemization and microbial asymmetric degradation.	Takahashi E, Furui M, Seko H, Shibatani T.	Appl Microbiol Biotechnol	10.1007/s002530050938	1997
Metabolism	Steroids as Environmental Compounds Recalcitrant to Degradation: Genetic Mechanisms of Bacterial Biodegradation Pathways.	Olivera ER, Luengo JM.	Genes (Basel)	10.3390/genes10070512	2019
	Escherichia coli O-Antigen Gene Clusters of Serogroups O62, O68, O131, O140, O142, and O163: DNA Sequences and Similarity between O62 and O68, and PCR-Based Serogrouping.	Liu Y, Yan X, DebRoy C, Fratamico PM, Needleman DS, Li RW, Wang W, Losada L, Brinkac L, Radune D, Toro M, Hegde N, Meng J.	Biosensors (Basel)	10.3390/bios5010051	2015
Enzymology	A new bacterial steroid degradation gene cluster in Comamonas testosteroni TA441 which consists of aromatic-compound degradation genes for seco-steroids and 3-ketosteroid dehydrogenase genes.	Horinouchi M, Hayashi T, Yamamoto T, Kudo T.	Appl Environ Microbiol	10.1128/aem.69.8.4421-4430.2003	2003
Enzymology	Characterization of the terephthalate degradation genes of Comamonas sp. strain E6.	Sasoh M, Masai E, Ishibashi S, Hara H, Kamimura N, Miyauchi K, Fukuda M.	Appl Environ Microbiol	10.1128/aem.72.3.1825-1832.2006	2006
Metabolism	Anoxic androgen degradation by the denitrifying bacterium Sterolibacterium denitrificans via the 2,3-seco pathway.	Wang PH, Yu CP, Lee TH, Lin CW, Ismail W, Wey SP, Kuo AT, Chiang YR.	Appl Environ Microbiol	10.1128/aem.03880-13	2014
	Testosterone-regulated expression of enzymes involved in steroid and aromatic hydrocarbon catabolism in Comamonas testosteroni.	Mobus E, Jahn M, Schmid R, Jahn D, Maser E.	J Bacteriol	10.1128/jb.179.18.5951-5955.1997	1997
Phylogeny	Recognition of individual genes in diverse microorganisms by cycling primed in situ amplification.	Kenzaka T, Tamaki S, Yamaguchi N, Tani K, Nasu M.	Appl Environ Microbiol	10.1128/aem.71.11.7236-7244.2005	2005
	The extent of functional redundancy changes as species' roles shift in different environments.	Fetzer I, Johst K, Schawe R, Banitz T, Harms H, Chatzinotas A.	Proc Natl Acad Sci U S A	10.1073/pnas.1505587112	2015
Enzymology	Gene encoding the hydrolase for the product of the meta-cleavage reaction in testosterone degradation by Comamonas testosteroni.	Horinouchi M, Hayashi T, Koshino H, Yamamoto T, Kudo T.	Appl Environ Microbiol	10.1128/aem.69.4.2139-2152.2003	2003
Metabolism	Mineralization of individual congeners of linear alkylbenzenesulfonate by defined pairs of heterotrophic bacteria.	Schleheck D, Knepper TP, Fischer K, Cook AM.	Appl Environ Microbiol	10.1128/aem.70.7.4053-4063.2004	2004
	Inducing mineral precipitation in groundwater by addition of phosphate.	Wright KE, Hartmann T, Fujita Y.	Geochem Trans	10.1186/1467-4866-12-8	2011
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Enzymology	Use of a simplified cell blot technique and 16S rRNA-directed probes for identification of common environmental isolates.	Braun-Howland EB, Vescio PA, Nierzwicki-Bauer SA.	Appl Environ Microbiol	10.1128/aem.59.10.3219-3224.1993	1993
Enzymology	Identification of clinical isolates of gram-negative nonfermentative bacteria by an automated cellular fatty acid identification system.	Osterhout GJ, Shull VH, Dick JD.	J Clin Microbiol	10.1128/jcm.29.9.1822-1830.1991	1991
	Psychrotolerant bacteria isolated from arctic soil that degrade polychlorinated biphenyls at low temperatures	Master ER, Mohn WW.	Appl Environ Microbiol	10.1128/aem.64.12.4823-4829.1998	1998
Enzymology	Cloning, sequencing, and expression in Escherichia coli of the D-hydantoinase gene from Pseudomonas putida and distribution of homologous genes in other microorganisms.	LaPointe G, Viau S, LeBlanc D, Robert N, Morin A.	Appl Environ Microbiol	10.1128/aem.60.3.888-895.1994	1994
Metabolism	Development and application of 16S rRNA-targeted probes for detection of iron- and manganese-oxidizing sheathed bacteria in environmental samples.	Siering PL, Ghiorse WC.	Appl Environ Microbiol	10.1128/aem.63.2.644-651.1997	1997
Enzymology	Characterization and regulation of the NADP-linked 7 alpha-hydroxysteroid dehydrogenase gene from Clostridium sordellii.	Coleman JP, Hudson LL, Adams MJ.	J Bacteriol	10.1128/jb.176.16.4865-4874.1994	1994
	Evolution in interacting species alters predator life-history traits, behaviour and morphology in experimental microbial communities.	Cairns J, Moerman F, Fronhofer EA, Altermatt F, Hiltunen T.	Proc Biol Sci	10.1098/rspb.2020.0652	2020
	Enrichment and characterization of steroid-degrading microbes for targeted removal of steroid hormone micropollutants in small-scale wastewater treatment solutions.	Kujala K, Nubel LL, Philipp B, Holert J.	Microbiol Spectr	10.1128/spectrum.00649-25	2025
	Enhanced biodegradation of high-density polyethylene microplastics: Study of bacterial efficiency and process parameters.	Newrick BA, Valdes D, Laca A, Laca A, Diaz M.	J Hazard Mater	10.1016/j.jhazmat.2024.136822	2025
Phylogeny	Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments.	Kowalchuk GA, Stephen JR, De Boer W, Prosser JI, Embley TM, Woldendorp JW.	Appl Environ Microbiol	10.1128/aem.63.4.1489-1497.1997	1997
	Comamonas testosteroni in perforated appendicitis: a rare cause of intra-abdominal infection.	Alkhalifah RH, Almarzooq MA, Alnajjar JS, Aljubran HJ.	J Surg Case Rep	10.1093/jscr/rjaf746	2025
	Towards polyethylene terephthalate valorisation into PHB using an engineered Comamonas testosteroni strain.	Molpeceres-Garcia FJ, Sanz-Mata D, Garcia-Miro A, Prieto A, Barriuso J.	N Biotechnol	10.1016/j.nbt.2024.12.005	2025
	Comamonas resistens Co-Producing GES-5 and OXA-17 in Urban Wastewater as a Potential Novel Disseminator of Clinically Relevant beta-Lactamases.	Furlan JPR, Bueno GC, Sousa-Carmo RR, Silva RLO, Barbosa MRF, Sato MIZ, Lincopan N, Schenkman S.	Curr Microbiol	10.1007/s00284-025-04394-9	2025
	Sensitive and Broadly Compatible Transcription Factor-Based Biosensor for Monitoring c-di-GMP Dynamics in Biofilms.	Hu Y, Liu J, Teng A, Zhang Y, Yang L, Cao B.	ACS Synth Biol	10.1021/acssynbio.5c00193	2025
	Poly(3-Hydroxybutyrate-Co-3-Hydroxyhexanoate): Real-Time Monitoring of Microbial Degradation via Quartz Crystal Microbalance and Electrochemical Measurement.	Asakura N, Otsuki T, Kitamura M, Hiraishi T, Abe H.	Biopolymers	10.1002/bip.70044	2025
	A new understanding of the regulatory mechanism by which Fe/Mn nanoparticles boost Bisphenol A removal using Comamonas testosteroni.	Xue C, Cai X, Wu R, Owens G, Chen Z.	J Hazard Mater	10.1016/j.jhazmat.2024.135503	2024
	Microbial diversity and enzymatic potential for plastic degradation in contaminated dumpsites in Mazamitla, Jalisco.	Sinisterra-Sierra MC, Campos-Valdez A, Pereira-Santana A, Zamora-Briseno JA, Ramirez-Perez SL, Gonzalez-Escobar JL, Kirchmayr MR, Barrera-Martinez I, Robles-Machuca M, Casas-Godoy L.	Environ Res	10.1016/j.envres.2025.122170	2025
	The hibernation promoting factor of Betaproteobacteria Comamonas testosteroni cannot induce 100S ribosome formation but stabilizes 70S ribosomal particles.	Ueta M, Wada A, Wada C.	Genes Cells	10.1111/gtc.13137	2024
Enzymology	Identification of dehydrogenase, hydratase, and aldolase responsible for the propionyl residue removal in degradation of cholic acid C-17 side chain in Comamonas testosteroni TA441.	Horinouchi M.	Microbiol Spectr	10.1128/spectrum.00308-25	2025
	Biodegradation of phthalic acid and terephthalic acid by Comamonas testosteroni strains.	Vural C, Ettadili H.	Folia Microbiol (Praha)	10.1007/s12223-024-01176-x	2024
	Enhancing the specific activity of 3alpha-hydroxysteroid dehydrogenase through cross-regional combinatorial mutagenesis.	Ma S, Li M, Yan S, Wang Y, Wang B, Luo W.	Int J Biol Macromol	10.1016/j.ijbiomac.2024.137014	2024
	Molecular Identification of Spironucleus vortens From the Digestive Tract of Discus (Symphysodon discus Heckel, 1840) and Its Association With Mixed Bacterial Coinfection.	Pastuszka A, Puk K, Guz L.	J Fish Dis	10.1111/jfd.14070	2025
	Erratum for Wilkes et al., "Analogous Metabolic Decoupling in Pseudomonas putida and Comamonas testosteroni Implies Energetic Bypass to Facilitate Gluconeogenic Growth".	Wilkes RA, Waldbauer J, Aristilde L.	mBio	10.1128/mbio.03352-23	2024
	Structure-guided engineering of an aromatic ring-hydroxylating dioxygenase for broad-spectrum phthalate degradation.	Mahto JK, Mishra I, Jangid K, Kumar P.	J Bacteriol	10.1128/jb.00221-25	2025
	Comamonas testosteroni as the cause of mortality in embryonated chicken eggs of breeding broiler hens in Costa Rica.	Chaves-Hernandez AJ, Barquero-Calvo E, Quesada-Vasquez D, Chacon-Diaz C.	Avian Pathol	10.1080/03079457.2023.2289587	2024
Transcriptome	The mechanism of anthracene degradation by tryptophan -2,3-dioxygenase (T23D) in Comamonas testosteroni.	Xu M, Yang X, Zhang J, Liu D, Zhang C, Wu M, Musazade E, Maser E, Xiong G, Guo L.	Chem Biol Interact	10.1016/j.cbi.2024.110950	2024
	A novel antimony metallochaperone AntC in Comamonas testosteroni JL40 and its application in antimony immobilization.	An L, Xu M, Hong M, Zhao L, Wei A, Luo X, Shi K, Zheng S, Li M.	Sci Total Environ	10.1016/j.scitotenv.2023.168815	2024
	Biochemical production of bio-based terephthalic acid from lignocellulosic biomass for CO2 emission reduction.	Nakagame S, Kawao T, Narita D, Yamamura A, Noda T.	J Ind Microbiol Biotechnol	10.1093/jimb/kuaf030	2024
	Repurposing the Sb(III)-specific efflux and sequestration system (ant operon) to mitigate antimonite cross-talk in ArsR-based bacterial arsenite sensors.	Ling J, Guo Y, Liu M, Yun J, Li B, Yang X, Wu X, Hui CY.	Microb Cell Fact	10.1186/s12934-025-02865-z	2025
	Exploration of potential driving mechanisms of Comamonas testosteroni in polycyclic aromatic hydrocarbons degradation and remodelled bacterial community during co-composting.	Jiang F, Jiang Z, Huang J, Tang P, Cui J, Feng W, Yu C, Fu C, Lu Q.	J Hazard Mater	10.1016/j.jhazmat.2023.132032	2023
	Toxic response of antimony in the Comamonas testosteroni and its application in soil antimony bioremediation.	Luo X, Guo J, Lan Y, An L, Zhang X, Shi K, Zheng S, Li M.	Environ Int	10.1016/j.envint.2023.108040	2023
	Environmental Impact of Xenobiotic Aromatic Compounds and Their Biodegradation Potential in Comamonas testosteroni.	Li Y, Fan H, Li B, Liu X.	Int J Mol Sci	10.3390/ijms252413317	2024
Enzymology	The Mechanism of Aniline Blue Degradation by Short-Chain Dehydrogenase (SDRz) in Comamonas testosteroni.	Zhang C, Huang Y, He J, He L, Zhang J, Yu L, Musazade E, Maser E, Xiong G, Xu M, Guo L.	Molecules	10.3390/molecules29225405	2024
	Epigenetic modifications and metabolic gene mutations drive resistance evolution in response to stimulatory antibiotics.	Lin H, Wang D, Wang Q, Mao J, Yang L, Bai Y, Qu J.	Mol Syst Biol	10.1038/s44320-025-00087-4	2025
	Isolation and Identification of Phenol-Degrading Bacteria from Iranian Soil and Leaf Samples.	Mortazavi A, Hassanshahian M, Ali E, Fenjan MN, Alawadi A, Alsalamy A.	Front Biosci (Elite Ed)	10.31083/j.fbe1504029	2023
	How Comamonas testosteroni and Rhodococcus ruber enhance nitrification in the presence of quinoline.	Zhu G, Zhang H, Yuan R, Huang M, Liu F, Li M, Zhang Y, Rittmann BE.	Water Res	10.1016/j.watres.2022.119455	2023
	Nondestructive and three-dimensional visualization by identifying elements using synchrotron radiation microscale X-ray CT reveals microbial and cavity distributions in anaerobic granular sludge.	Urasaki K, Morono Y, Uramoto G-I, Uesugi K, Yasutake M, Akishiba M, Guo G, Li Y-Y, Kubota K.	Appl Environ Microbiol	10.1128/aem.00563-24	2024
	An investigation of clinical characteristics and antimicrobial agent susceptibility patterns in clinical Comamonas testosteroni isolates: An increasingly prevalent nosocomial pathogen.	Ozbay BO, Aypak A, Bastug A, Aydos O, Mumcuoglu I, Buyukberber SG, Karcioglu AM, Bodur H.	Infect Dis Now	10.1016/j.idnow.2022.09.017	2023
	Sal is a proteobacterial bile acid aldolase that repurposes key thiolase catalytic residues for retroaldol cleavage of C₅ steroid side chains.	Rolfe N, Schroeter KL, Forrester TJ, Kimber MS, Seah SY.	J Biol Chem	10.1016/j.jbc.2025.110439	2025
	Effects of Comamonas testosteroni on dissipation of polycyclic aromatic hydrocarbons and the response of endogenous bacteria for soil bioremediation.	Lu Q, Sun X, Jiang Z, Cui Y, Li X, Cui J.	Environ Sci Pollut Res Int	10.1007/s11356-022-21497-z	2022
	Chemoreceptors from the commensal gut Roseburia rectibacter bind to mucin and trigger chemotaxis.	Chen HH, Wang YX, Li DF, Liu C, Bi SY, Jiang CY, Liu SJ.	Environ Microbiol	10.1111/1462-2920.16365	2023
	A rare case of peritoneal dialysis-associated peritonitis caused by Comamonas testosteroni.	Kuzniewicz R, Snit M, Szczyra D.	Semin Dial	10.1111/sdi.13126	2022
	Artificial intelligence modeling and molecular docking to analyze the laccase delignification process of rice straw by Comamonas testosteroni FJ17.	Wang L, Xue C, Owens G, Chen Z.	Bioresour Technol	10.1016/j.biortech.2021.126565	2022
	Radiotolerance of N-cycle bacteria and their transcriptomic response to low-dose space-analogue ionizing irradiation.	Verbeelen T, Fernandez CA, Nguyen TH, Gupta S, Leroy B, Wattiez R, Vlaeminck SE, Leys N, Ganigue R, Mastroleo F.	iScience	10.1016/j.isci.2024.109596	2024
	Aerobic polychlorinated biphenyl-degrading bacteria isolated from the Tohoku region of Japan are not regionally endemic.	Hara T, Takatsuka Y.	Can J Microbiol	10.1139/cjm-2021-0056	2022
	Environment-Organism Feedbacks Drive Changes in Ecological Interactions.	Meacock OJ, Mitri S.	Ecol Lett	10.1111/ele.70027	2025
	Engineering Comamonas testosteroni for the production of 2-pyrone-4,6-dicarboxylic acid as a promising building block.	Delmulle T, Bovijn S, Deketelaere S, Castelein M, Erauw T, D'hooghe M, Soetaert WK.	Microb Cell Fact	10.1186/s12934-023-02202-2	2023
	Networking and co-occurrence of virulent and multidrug resistant environmental bacteria in different aquatic systems: A gap in MDR-virulence transfer?	Saravanakumar C, Neethu CS, Purvaja R, Sunantha G, Robin RS, Ramesh R.	Sci Total Environ	10.1016/j.scitotenv.2022.159221	2023
	Isolation of Pb(II)-reducing bacteria and demonstration of biological Pb(II) reduction to metallic Pb.	Amer A, Kim Y.	J Hazard Mater	10.1016/j.jhazmat.2021.126975	2022
	Low-Level Cefepime Exposure Induces High-Level Resistance in Environmental Bacteria: Molecular Mechanism and Evolutionary Dynamics.	Wang H, Feng Y, Lu H.	Environ Sci Technol	10.1021/acs.est.2c00793	2022
	Molecular Research of Lipid Peroxidation and Antioxidant Enzyme Activity of Comamonas testosteroni Bacterial Cells under the Hexachlorobenzene Impact.	Dimova M, Tugai A, Tugai T, Iutynska G, Dordevic D, Kushkevych I.	Int J Mol Sci	10.3390/ijms231911415	2022
	Comparison of the efficacy of carbapenems and cephalosporins for postoperative treatment of perforated appendicitis in children.	Hang T, Chen QL, Li YH, Wang SW, Jiang XH, Zhu WC.	World J Gastrointest Surg	10.4240/wjgs.v17.i4.104712	2025
Transcriptome	Vogesella urethralis-induced aspiration pneumonia and bacteremia in an elderly man: a first case report and literature review.	Matsuda H, Katayama I, Watanabe T, Komatsu A, Iwakami N, Goto Y, Suzuki M, Iwakami SI, Takahashi K.	BMC Infect Dis	10.1186/s12879-023-08269-x	2023
	[Effects of Comamonas testosteroni on PAHs degradation and bacterial community structure in Leymus chinensis rhizosphere soil].	Wang Q, Zheng R, Sun X, Jiang Z, Yang F, Lu Q, Cui J.	Sheng Wu Gong Cheng Xue Bao	10.13345/j.cjb.200381	2020
	How bioaugmentation with Comamonas testosteroni accelerates pyridine mono-oxygenation and mineralization.	Zhu G, Zhang Y, Chen S, Wang L, Zhang Z, Rittmann BE.	Environ Res	10.1016/j.envres.2020.110553	2021
	Whole transcriptome analysis highlights nutrient limitation of nitrogen cycle bacteria in simulated microgravity.	Verbeelen T, Fernandez CA, Nguyen TH, Gupta S, Aarts R, Tabury K, Leroy B, Wattiez R, Vlaeminck SE, Leys N, Ganigue R, Mastroleo F.	NPJ Microgravity	10.1038/s41526-024-00345-z	2024
Enzymology	Characterization of lignin-degrading enzyme PmdC, which catalyzes a key step in the synthesis of polymer precursor 2-pyrone-4,6-dicarboxylic acid.	Rodrigues AV, Moriarty NW, Kakumanu R, DeGiovanni A, Pereira JH, Gin JW, Chen Y, Baidoo EEK, Petzold CJ, Adams PD.	J Biol Chem	10.1016/j.jbc.2024.107736	2024
	Comprehensive summary of steroid metabolism in Comamonas testosteroni TA441: entire degradation process of basic four rings and removal of C12 hydroxyl group.	Horinouchi M, Hayashi T.	Appl Environ Microbiol	10.1128/aem.00143-23	2023
Genetics	Biodegradation of sodium selenite by a highly tolerant strain Rhodococcus qingshengii PM1: Biochemical characterization and comparative genome analysis.	Wang Z, Hou X, Guo Z, Lei X, Peng M.	Curr Res Microb Sci	10.1016/j.crmicr.2025.100426	2025
Transcriptome	Common and unique testosterone and 17 beta-estradiol degradation mechanisms in Comamonas testosteroni JLU460ET by transcriptome analysis.	Wang Z, Chen M, Liu N, Zhao Y, Ru J, Qin C, Zhang T.	Front Microbiol	10.3389/fmicb.2023.1238855	2023
	Quantitative analysis of the surficial and adhesion properties of the Gram-negative bacterial species Comamonas testosteroni modulated by c-di-GMP.	Yang S, Wu Y, Qu C, Fein JB, He Y, Huang Q, Cai P.	Colloids Surf B Biointerfaces	10.1016/j.colsurfb.2020.111497	2021
	The evolution of reduced facilitation in a four-species bacterial community.	Piccardi P, Ulrich E, Garcia-Garcera M, Martino RD, Testa SEA, Mitri S.	Evol Lett	10.1093/evlett/qrae036	2024
Enzymology	Construction of an Efficient Nicotinate Dehydrogenase Expression System in Comamonas testosteroni CNB-2 with Multi-level N-Terminal Engineering.	Lu ZH, Yang LR, Wu JP.	Appl Biochem Biotechnol	10.1007/s12010-020-03354-2	2020
	Identification of "missing links" in C- and D-ring cleavage of steroids by Comamonas testosteroni TA441.	Horinouchi M, Hayashi T.	Appl Environ Microbiol	10.1128/aem.01050-23	2023
	Comamonas testosteroni bacteremia: A rare unusual pathogen detected in a burned patient: Case report and literature review.	Sammoni A, Abdalah A, Al-Aissami M.	Ann Med Surg (Lond)	10.1016/j.amsu.2022.103371	2022
	Evolutionary Relationships Between Dysregulated Genes in Oral Squamous Cell Carcinoma and Oral Microbiota.	Fang Y, Yang Y, Liu C.	Front Cell Infect Microbiol	10.3389/fcimb.2022.931011	2022
	Two new selenite reducing bacterial isolates from paddy soil and the potential Se biofortification of paddy rice.	Huang C, Wang H, Shi X, Wang Y, Li P, Yin H, Shao Y.	Ecotoxicology	10.1007/s10646-020-02273-6	2021
	Quorum-sensing gene regulates hormetic effects induced by sulfonamides in Comamonadaceae.	Lin H, Ning X, Wang D, Wang Q, Bai Y, Qu J.	Appl Environ Microbiol	10.1128/aem.01662-23	2023
	Bacteria of Zoonotic Interest Identified on Edible Freshwater Fish Imported to Australia.	Williams M, Shamsi S, Williams T, Hernandez-Jover M.	Foods	10.3390/foods12061288	2023
	Structural Insights into Dihydroxylation of Terephthalate, a Product of Polyethylene Terephthalate Degradation.	Mahto JK, Neetu N, Sharma M, Dubey M, Vellanki BP, Kumar P.	J Bacteriol	10.1128/jb.00543-21	2022
	Attractant and repellent induce opposing changes in the four-helix bundle ligand-binding domain of a bacterial chemoreceptor.	Guo L, Wang YH, Cui R, Huang Z, Hong Y, Qian JW, Ni B, Xu AM, Jiang CY, Zhulin IB, Liu SJ, Li DF.	PLoS Biol	10.1371/journal.pbio.3002429	2023
	Wohlfahrtiimonas chitiniclastica: A rare infection reported in an adult with liver cirrhosis.	Kozyk M, Strubchevska K, Fisher J.	Clin Case Rep	10.1002/ccr3.6972	2023
	[Comamonas kerstersii bacteremia in a young man with acute appendicitis].	Palacio R, Cabezas L, Cornejo C, Seija V.	Rev Chilena Infectol	10.4067/s0716-10182020000200182	2020
	Continuity of carbapenem resistance determinants in carioca river and Rodrigo de Freitas Lagoon, Rio de Janeiro, Brazil, after decade.	Martins LB, Carneiro MT, Chagas TPG, Zahner V.	Sci Rep	10.1038/s41598-025-21876-9	2025
	In-planta production of the biodegradable polyester precursor 2-pyrone-4,6-dicarboxylic acid (PDC): Stacking reduced biomass recalcitrance with value-added co-product.	Lin CY, Vuu KM, Amer B, Shih PM, Baidoo EEK, Scheller HV, Eudes A.	Metab Eng	10.1016/j.ymben.2021.04.011	2021
	The zebrafish model requires a standardized synthetic microbial community analogous to the oligo-mouse-microbiota (OMM12).	Garibay-Valdez E, Martinez-Porchas M, Vargas-Albores F, Medina-Felix D, Martinez-Cordova LR.	Front Microbiol	10.3389/fmicb.2024.1407092	2024
Genetics	Recent advances in genome annotation and synthetic biology for the development of microbial chassis.	Hamese S, Mugwanda K, Takundwa M, Prinsloo E, Thimiri Govinda Raj DB.	J Genet Eng Biotechnol	10.1186/s43141-023-00598-3	2023
	Mapping human pathogens in wastewater using a metatranscriptomic approach.	Carneiro J, Pascoal F, Semedo M, Pratas D, Tomasino MP, Rego A, Carvalho MF, Mucha AP, Magalhaes C.	Environ Res	10.1016/j.envres.2023.116040	2023
	The Response Regulator FlmD Regulates Biofilm Formation in Comamonas testosteroni through the Transcriptional Activator SoxR.	Wang Y, Huang Z, Zhou N, Liu C, Jiang C, Li D, Liu S.	Microorganisms	10.3390/microorganisms10020356	2022
Enzymology	Molecular insights into substrate recognition and catalysis by phthalate dioxygenase from Comamonas testosteroni.	Mahto JK, Neetu N, Waghmode B, Kuatsjah E, Sharma M, Sircar D, Sharma AK, Tomar S, Eltis LD, Kumar P.	J Biol Chem	10.1016/j.jbc.2021.101416	2021
	Developing a Synthetic Biology Toolkit for Comamonas testosteroni, an Emerging Cellular Chassis for Bioremediation.	Tang Q, Lu T, Liu SJ.	ACS Synth Biol	10.1021/acssynbio.7b00430	2018
Metabolism	PapA, a peptidoglycan-associated protein, interacts with OmpC and maintains cell envelope integrity.	Wang YH, Chen HH, Huang Z, Li XJ, Zhou N, Liu C, Jiang CY, Li DF, Liu SJ.	Environ Microbiol	10.1111/1462-2920.15038	2021
Metabolism	The catabolism of lignin-derived p-methoxylated aromatic compounds by Rhodococcus jostii RHA1.	Wolf ME, Lalande AT, Newman BL, Bleem AC, Palumbo CT, Beckham GT, Eltis LD.	Appl Environ Microbiol	10.1128/aem.02155-23	2024
	Responses of Exogenous Bacteria to Soluble Extracellular Polymeric Substances in Wastewater: A Mechanistic Study and Implications on Bioaugmentation.	Wu Y, Zaiden N, Liu X, Mukherjee M, Cao B.	Environ Sci Technol	10.1021/acs.est.0c00015	2020
Biotechnology	Fermentative hydrogen production and bioelectricity generation from food based industrial waste: An integrative approach.	Ramu SM, Thulasinathan B, Gujuluva Hari D, Bora A, Jayabalan T, Mohammed SN, Doble M, Arivalagan P, Alagarsamy A.	Bioresour Technol	10.1016/j.biortech.2020.123447	2020
	Successful Treatment of an AML Patient Infected with Hypervirulent ST463 Pseudomonas Aeruginosa Harboring Rare Carbapenem-Resistant Genes blaAFM-1 and blaKPC-2 Following Allogeneic Hematopoietic Stem Cell Transplantation.	Shen Y, Cao J, Hu T, Yang X, Zhao Y, Shen Y, Ye B, Yu Y, Wu D.	Infect Drug Resist	10.2147/idr.s455746	2024
	Analyzing the Interaction between Tetrahymena pyriformis and Bacteria under Different Physicochemical Conditions When Infecting Guppy Using the eDNA Method.	Wang J, Wang X, Liu L, Wang X, Wang J, Zheng Y, Wang L, Pan X.	Animals (Basel)	10.3390/ani14152194	2024
Pathogenicity	A microfluidic gradient mixer-flow chamber as a new tool to study biofilm development under defined solute gradients.	Zhang Y, Li C, Wu Y, Zhang Y, Zhou Z, Cao B.	Biotechnol Bioeng	10.1002/bit.26852	2019
	Application of Rhodococcus jostii RHA1 glycolate oxidase as an efficient accessory enzyme for lignin conversion by bacterial Dyp peroxidase enzymes.	Alruwaili A, Rashid GMM, Bugg TDH.	Green Chem	10.1039/d3gc00475a	2023
	Antinematode Activity of Abomasum Bacterial Culture Filtrates against Haemonchus contortus in Small Ruminants.	Nazish A, Fozia, Khattak B, Ali Khan T, Ahmad I, Ullah R, Bari A, Asmari MM, Mahmood HM, Sohaib M, El Askary A, El-Kott AF, Abdel-Daim MM.	Animals (Basel)	10.3390/ani11061843	2021
	Dirammox-dominated microbial community for biological nitrogen removal from wastewater.	Hu Y, Wang Y, Wang R, Wang X, Liu SJ.	Appl Microbiol Biotechnol	10.1007/s00253-024-13214-2	2024
	Media Optimization, Strain Compatibility, and Low-Shear Modeled Microgravity Exposure of Synthetic Microbial Communities for Urine Nitrification in Regenerative Life-Support Systems.	Ilgrande C, Defoirdt T, Vlaeminck SE, Boon N, Clauwaert P.	Astrobiology	10.1089/ast.2018.1981	2019
	A young child with acute perforated appendicitis due to Comamonas kerstersii: a rare case report.	Bennani H, El Ouarradi A, Hanchi AL, Soraa N.	Pan Afr Med J	10.11604/pamj.2022.41.186.29615	2022
	The influence of benzene on the composition, diversity and performance of the anodic bacterial community in glucose-fed microbial fuel cells.	Tyszkiewicz N, Truu J, Mlynarz P, Pasternak G.	Front Microbiol	10.3389/fmicb.2024.1384463	2024
Metabolism	Polyhydroxybutyrate (PHB) biodegradation using bacterial strains with demonstrated and predicted PHB depolymerase activity.	Martinez-Tobon DI, Gul M, Elias AL, Sauvageau D.	Appl Microbiol Biotechnol	10.1007/s00253-018-9153-8	2018
	The Effect of Lactiplantibacillus plantarum and Lacticaseiba-cillus Rhamnosus Strains on the Reduction of Hexachlorobenzene Residues in Fermented Goat Milk During Refrigerated Storage.	Witczak A, Dmytrow I, Mituniewicz-Malek A.	Molecules	10.3390/molecules29235686	2024
Enzymology	Unlocking Testosterone Production by Biotransformation: Engineering a Fungal Model of Aspergillus nidulans Strain Deficient in Steroid 11alpha-Hydroxylase Activity and Expressing 17beta-Hydroxysteroid Dehydrogenase Enzyme as Proof of Concept.	Ortega-de Los Rios L, Getino L, Galan B, Garcia JL, Luengo JM, Chamizo-Ampudia A, Fernandez-Canon JM.	Biomolecules	10.3390/biom14121502	2024
	Comamonas kerstersii Bacteremia of Unknown Origin.	Rong K, Delport J, AlMutawa F.	Case Rep Infect Dis	10.1155/2022/1129832	2022
Phylogeny	Bacteremia caused by Comamonas kerstersii in a patient with acute perforated appendicitis and localized peritonitis: case report and literature review.	Zhang Y, Li K, Zhan Y, Shi L, Zeng Y, Wang H, Lu Z.	Front Med (Lausanne)	10.3389/fmed.2023.1283769	2023
	Bacteremia caused by Comamonas testosteroni an unusual pathogen.	Tiwari S, Nanda M.	J Lab Physicians	10.4103/jlp.jlp_116_18	2019
	Oxidative stress changes interactions between 2 bacterial species from competitive to facilitative.	Di Martino R, Picot A, Mitri S.	PLoS Biol	10.1371/journal.pbio.3002482	2024
	The role of cyclic di-GMP in biomaterial-associated infections caused by commensal Escherichia coli.	Li S, Bi C, Xiang B, Wang Z, Yang H, Fu C, Chen L, Chen Y.	PLoS One	10.1371/journal.pone.0330229	2025
Metabolism	Carbon catabolite repression and cell dispersal affect degradation of the xenobiotic compound 3,4-dichloroaniline in Comamonas testosteroni WDL7 biofilms.	Horemans B, Breugelmans P, Hofkens J, Springael D.	FEMS Microbiol Ecol	10.1093/femsec/fix004	2017
	Characterization of a rapid 17beta-estradiol-degrading strain, Microbacterium proteolyticum ZJSU01.	Chen Y, Chen T, Xu W, Yu X, Tang X, Wang Y, Yin J.	Appl Microbiol Biotechnol	10.1007/s00253-025-13480-8	2025
	The Relationship between Microbial Communities in Coffee Fermentation and Aroma with Metabolite Attributes of Finished Products.	Todhanakasem T, Van Tai N, Pornpukdeewattana S, Charoenrat T, Young BM, Wattanachaisaereekul S.	Foods	10.3390/foods13152332	2024
Genetics	XenoBug: machine learning-based tool to predict pollutant-degrading enzymes from environmental metagenomes.	Malwe AS, Longwani U, Sharma VK.	NAR Genom Bioinform	10.1093/nargab/lqaf037	2025
	Veillonella dispar and V. atypica increased the growth of Listeria monocytogenes in liquid culture and biofilm conditions.	Shedleur-Bourguignon F, Theriault WP, Berthiaume F, Doghri I, Longpre J, Thibodeau A, Fravalo P.	PLoS One	10.1371/journal.pone.0332852	2025
Metabolism	Identification of the Coenzyme A (CoA) Ester Intermediates and Genes Involved in the Cleavage and Degradation of the Steroidal C-Ring by Comamonas testosteroni TA441.	Horinouchi M, Hayashi T.	Appl Environ Microbiol	10.1128/aem.01102-21	2021
	Succession of the multi-site microbiome along pancreatic ductal adenocarcinoma tumorigenesis.	Zhu Y, Liang X, Zhi M, Li L, Zhang G, Chen C, Wang L, Wang P, Zhong N, Feng Q, Li Z.	Front Immunol	10.3389/fimmu.2024.1487242	2024
	[Study on drug sensitivity against Comamonas testosteroni by Kirby-Bauer disk diffusion method].	Kong C, Chen J, Zou X, Zhang Y, Zhu L.	Zhong Nan Da Xue Xue Bao Yi Xue Ban	10.11817/j.issn.1672-7347.2016.08.014	2016
	Emerging crops and plant growth-promoting bacteria (PGPB): a synergistic approach to climate-resilient agriculture.	Perez-Montano F, Aparicio N, Arenas F, Arjona JM, Camacho M, Fernandez-Garcia N, Garcia-Fraile P, Goicoechea N, Macias-Naranjo S, Matias J, Montero-Calasanz MDC, Morte A, Olmos E, Pueyo JJ, Quinones MA, Rey L, Reguera M.	Microbiome	10.1186/s40168-025-02225-4	2025
Genetics	Emergence of IMP-8-Producing Comamonas thiooxydans Causing Urinary Tract Infection in China.	Guo X, Wang Q, Xu H, He X, Guo L, Liu S, Wen P, Gou J.	Front Microbiol	10.3389/fmicb.2021.585716	2021
Genetics	Metagenomic analysis reveals the abundance changes of bacterial communities and antibiotic resistance genes in the influent and effluent of hospital wastewater.	Jia X, Peng J, Lv J, Li Y, Luo Z, Xiang J, Hou Y, Zheng Q, Han B.	PLoS One	10.1371/journal.pone.0335723	2025
Enzymology	The NADH recycling enzymes TsaC and TsaD regenerate reducing equivalents for Rieske oxygenase chemistry.	Tian J, Boggs DG, Donnan PH, Barroso GT, Garcia AA, Dowling DP, Buss JA, Bridwell-Rabb J.	J Biol Chem	10.1016/j.jbc.2023.105222	2023
	Isolation of Bacteria with Potential Plant-Promoting Traits and Optimization of Their Growth Conditions.	Yaghoubi Khanghahi M, Strafella S, Allegretta I, Crecchio C.	Curr Microbiol	10.1007/s00284-020-02303-w	2021
Metabolism	Direct sensing and signal transduction during bacterial chemotaxis toward aromatic compounds in Comamonas testosteroni.	Huang Z, Ni B, Jiang CY, Wu YF, He YZ, Parales RE, Liu SJ.	Mol Microbiol	10.1111/mmi.13385	2016
Enzymology	Homologous relationship between FabG involved in fatty acid biosynthesis and SDR on chromosome II in the multi-chromosome pathogen Vibrio anguillarum.	Kim DG, Park SY, Rafiquzzaman SM, Lee JM.	Sci Rep	10.1038/s41598-025-92645-x	2025
	Metagenomics Reveal Microbial Effects of Lotus Root-Fish Co-Culture on Nitrogen Cycling in Aquaculture Pond Sediments.	Yang Z, Yao Y, Sun M, Li G, Zhu J.	Microorganisms	10.3390/microorganisms10091740	2022
Metabolism	Oxygen and diverse nutrients influence the water kefir fermentation process.	Laureys D, Aerts M, Vandamme P, De Vuyst L.	Food Microbiol	10.1016/j.fm.2018.02.007	2018
Genetics	Plastic degradation by enzymes from uncultured deep sea microorganisms.	Acosta DJ, Barth DR, Bondy J, Appler KE, De Anda V, Ngo PHT, Alper HS, Baker BJ, Marcotte EM, Ellington AD.	ISME J	10.1093/ismejo/wraf068	2025
	Newly isolated halotolerant Gordonia terrae S-LD serves as a microbial cell factory for the bioconversion of used soybean oil into polyhydroxybutyrate.	Xu S, Han R, Tao L, Zhang Z, Gao J, Wang X, Zhao W, Zhang X, Huang Z.	Biotechnol Biofuels Bioprod	10.1186/s13068-025-02613-w	2025
	Multidrug-Resistant Bacteria in Hospital Wastewater of the Korle Bu Teaching Hospital in Accra, Ghana.	Addae-Nuku DS, Kotey FC, Dayie NT, Osei MM, Tette EM, Debrah P, Donkor ES.	Environ Health Insights	10.1177/11786302221130613	2022
Phylogeny	Secondary metabolites extracted from marine sponge associated Comamonas testosteroni and Citrobacter freundii as potential antimicrobials against MDR pathogens and hypothetical leads for VP40 matrix protein of Ebola virus: an in vitro and in silico investigation.	Skariyachan S, Acharya AB, Subramaniyan S, Babu S, Kulkarni S, Narayanappa R.	J Biomol Struct Dyn	10.1080/07391102.2015.1094412	2016
	Comamonas testosteroni: Is It Still a Rare Human Pathogen?	Farooq S, Farooq R, Nahvi N.	Case Rep Gastroenterol	10.1159/000452197	2017
	The Brief Case: The Fly Who Cried Wohlf.	Ahmad Y, Gaston DC, Gray J, Zhong D, Gudenkauf B, Bourdas D, Ray SC, Simner PJ.	J Clin Microbiol	10.1128/jcm.01073-21	2022
Metabolism	Quantitative decoding of coupled carbon and energy metabolism in Pseudomonas putida for lignin carbon utilization.	Zhou N, Wilkes RA, Chen X, Teitel KP, Belgrave JA, Beckham GT, Werner AZ, Yu Y, Aristilde L.	Commun Biol	10.1038/s42003-025-08723-3	2025
	A native bacterial consortium degrades estriol in domestic sewage and activated sludge via the 4,5-seco pathway and requires estriol to retain its biodegradation phenotype.	Hashem JS, Ismail W, Chiang Y-R, Sangal V, Hentati D, Abotalib N, Bekhit AA.	Microbiol Spectr	10.1128/spectrum.00741-25	2025
	Involvement in Denitrification is Beneficial to the Biofilm Lifestyle of Comamonas testosteroni: A Mechanistic Study and Its Environmental Implications.	Wu Y, Shukal S, Mukherjee M, Cao B.	Environ Sci Technol	10.1021/acs.est.5b03381	2015
	Isolation, screening, and characterization of heavy metal-resistant bacteria from solid waste dumping sites in Central Gondar, Northwest, Ethiopia.	Dinku A, Jiru TM.	Sci Prog	10.1177/00368504251315807	2025
Enzymology	Structure, kinetics, and mechanism of Pseudomonas putida sulfoquinovose dehydrogenase, the first enzyme in the sulfoglycolytic Entner-Doudoroff pathway.	Burchill L, Sharma M, Soler NM, Goddard-Borger ED, Davies GJ, Williams SJ.	Biochem J	10.1042/bcj20240605	2025
Genetics	The arsenic bioremediation using genetically engineered microbial strains on aquatic environments: An updated overview.	Naiel MAE, Taher ES, Rashed F, Ghazanfar S, Shehata AM, Mohammed NA, Pascalau R, Smuleac L, Ibrahim AM, Abdeen A, Shukry M.	Heliyon	10.1016/j.heliyon.2024.e36314	2024
	Evaluation of the Catalytic Contribution from a Positioned General Base in Ketosteroid Isomerase.	Lamba V, Yabukarski F, Pinney M, Herschlag D.	J Am Chem Soc	10.1021/jacs.6b04796	2016
	Delignification and enhanced gas release from soil containing lignocellulose by treatment with bacterial lignin degraders.	Rashid GMM, Duran-Pena MJ, Rahmanpour R, Sapsford D, Bugg TDH.	J Appl Microbiol	10.1111/jam.13470	2017
	Microbial invasion of a toxic medium is facilitated by a resident community but inhibited as the community co-evolves.	Piccardi P, Alberti G, Alexander JM, Mitri S.	ISME J	10.1038/s41396-022-01314-8	2022
Metabolism	Augmentation of an Engineered Bacterial Strain Potentially Improves the Cleanup of PCB Water Pollution.	Hara T, Takatsuka Y, Nakata E, Morii T.	Microbiol Spectr	10.1128/spectrum.01926-21	2021
	Does microbial resistance profile change in community-based intra-abdominal infections? Evaluation of the culture results of patients with appendicitis.	Tartar T, Sagmak-Tartar A, Sarac M, Bakal U, Akbulut A, Kazez A.	Turk J Pediatr	10.24953/turkjped.2018.05.008	2018
Enzymology	Phytostimulatory Influence of Comamonas testosteroni and Silver Nanoparticles on Linum usitatissimum L. under Salinity Stress.	Khalofah A, Kilany M, Migdadi H.	Plants (Basel)	10.3390/plants10040790	2021
Metabolism	Analyzing the catalytic role of active site residues in the Fe-type nitrile hydratase from Comamonas testosteroni Ni1.	Martinez S, Wu R, Krzywda K, Opalka V, Chan H, Liu D, Holz RC.	J Biol Inorg Chem	10.1007/s00775-015-1273-3	2015
Metabolism	Catabolic task division between two near-isogenic subpopulations co-existing in a herbicide-degrading bacterial consortium: consequences for the interspecies consortium metabolic model.	Albers P, Lood C, Ozturk B, Horemans B, Lavigne R, van Noort V, De Mot R, Marchal K, Sanchez-Rodriguez A, Springael D.	Environ Microbiol	10.1111/1462-2920.13994	2018
Metabolism	Isolation and characterization of a cold-resistant PCB209-degrading bacterial strain from river sediment and its application in bioremediation of contaminated soil.	Qiu L, Wang H, Wang X.	J Environ Sci Health A Tox Hazard Subst Environ Eng	10.1080/10934529.2015.1094324	2016
Metabolism	A novel chemoreceptor MCP2983 from Comamonas testosteroni specifically binds to cis-aconitate and triggers chemotaxis towards diverse organic compounds.	Ni B, Huang Z, Wu YF, Fan Z, Jiang CY, Liu SJ.	Appl Microbiol Biotechnol	10.1007/s00253-014-6216-3	2015
	Fecal and oral microbiome analysis of snakes from China reveals a novel natural emerging disease reservoir.	Hu X, Yang L, Zhang Y, Yang M, Li J, Fan Y, Guo P, Tian Z.	Front Microbiol	10.3389/fmicb.2023.1339188	2023
	Bioaugmentation of a sequencing batch biofilm reactor with Comamonas testosteroni and Bacillus cereus and their impact on reactor bacterial communities	Cheng Z, Chen M, Xie L, Peng L, Yang M, Li M.	Biotechnol Lett		2015
	Enhance antibiotic resistance and human health risks in aerosols during the COVID-19 pandemic.	Wang Q, Liu C, Sun S, Yang G, Luo J, Wang N, Chen B, Wang L.	Sci Total Environ	10.1016/j.scitotenv.2023.162035	2023
Metabolism	Construction of a biosensor mutant of Comamonas testosteroni for testosterone determination by cloning the EGFP gene downstream to the regulatory region of the 3,17beta-HSD gene.	Xiong G, Maser E.	Chem Biol Interact	10.1016/j.cbi.2014.11.014	2015
	MALDI-TOF Mass Spectrometry Characterization of Culturable Microbiota Associated with the Skin of Amphibians from the Southern Andes Mountains of Ecuador.	Salazar J, Gonzalez J, Riofrio R, Siavichay F, Carrera M, Mogrovejo A, Barrera-Galicia G, Valdez-Tenezaca A.	Microb Ecol	10.1007/s00248-025-02555-8	2025
	High-fertility sows reshape gut microbiota: the rise of serotonin-related bacteria and its impact on sustaining reproductive performance.	Chen Y, Wang Y, Shaoyong W, He Y, Liu Y, Wei S, Gan Y, Sun L, Wang Y, Zong X, Xiang Y, Wang Y, Jin M.	J Anim Sci Biotechnol	10.1186/s40104-025-01191-z	2025
	Bioaugmentation of a sequencing batch biofilm reactor with Comamonas testosteroni and Bacillus cereus and their impact on reactor bacterial communities.	Cheng Z, Chen M, Xie L, Peng L, Yang M, Li M.	Biotechnol Lett	10.1007/s10529-014-1684-1	2015
Enzymology	Biodegradation of propyzamide by Comamonas testosteroni W1 and cloning of the propyzamide hydrolase gene camH.	Zhao B, Hua X, Wang F, Dong W, Li Z, Yang Y, Cui Z, Wang M.	Bioresour Technol	10.1016/j.biortech.2014.12.009	2015
Genetics	Comparative genome analysis reveals genetic adaptation to versatile environmental conditions and importance of biofilm lifestyle in Comamonas testosteroni.	Wu Y, Arumugam K, Tay MQ, Seshan H, Mohanty A, Cao B.	Appl Microbiol Biotechnol	10.1007/s00253-015-6519-z	2015
Biotechnology	Metabolomic profiling and 16 S rRNA metabarcoding of endophytes of two Aloe species revealed diverse metabolites.	Marokane-Radebe C, Raimi A, Amoo S, Adeleke R.	AMB Express	10.1186/s13568-024-01784-3	2024
Metabolism	The ligand-binding domain of a chemoreceptor from Comamonas testosteroni has a previously unknown homotrimeric structure.	Hong Y, Huang Z, Guo L, Ni B, Jiang CY, Li XJ, Hou YJ, Yang WS, Wang DC, Zhulin IB, Liu SJ, Li DF.	Mol Microbiol	10.1111/mmi.14326	2019
	Biogenic metallic nanoparticles as enzyme mimicking agents.	Ngcongco K, Krishna SBN, Pillay K.	Front Chem	10.3389/fchem.2023.1107619	2023
Metabolism	Elevated level of the second messenger c-di-GMP in Comamonas testosteroni enhances biofilm formation and biofilm-based biodegradation of 3-chloroaniline.	Wu Y, Ding Y, Cohen Y, Cao B.	Appl Microbiol Biotechnol	10.1007/s00253-014-6107-7	2015
	Comamonas testosteroni antA encodes an antimonite-translocating P-type ATPase.	An L, Luo X, Wu M, Feng L, Shi K, Wang G, Rosen BP, Li M.	Sci Total Environ	10.1016/j.scitotenv.2020.142393	2021
Metabolism	Steroid Degradation in Comamonas testosteroni TA441: Identification of Metabolites and the Genes Involved in the Reactions Necessary before D-Ring Cleavage.	Horinouchi M, Koshino H, Malon M, Hirota H, Hayashi T.	Appl Environ Microbiol	10.1128/aem.01324-18	2018
	Candidiasis and Other Bacterial Infections among Patients Diagnosed with Burning Mouth Syndrome.	Jankovskis V, Selga G.	Medicina (Kaunas)	10.3390/medicina58081029	2022
	Periplasmic binding proteins Bug69 and Bug27 from Bordetella pertussis are in vitro high-affinity quinolinate binders with a potential role in NAD biosynthesis.	Sorci L, Minazzato G, Amici A, Mazzola F, Raffaelli N.	FEBS Open Bio	10.1002/2211-5463.13876	2024
Metabolism	Analogous Metabolic Decoupling in Pseudomonas putida and Comamonas testosteroni Implies Energetic Bypass to Facilitate Gluconeogenic Growth.	Wilkes RA, Waldbauer J, Aristilde L.	mBio	10.1128/mbio.03259-21	2021
	Evaluating the Potential of Microdroplet Flow in Two-Phase Biocatalysis: A Systematic Study.	Xiang L, Solarczek J, Krajka V, Liu H, Ahlborn L, Schallmey A, Constantinou I.	ACS Appl Mater Interfaces	10.1021/acsami.4c15647	2025
	Highlight on Engineering Mycobacterium smegmatis for testosterone production.	Sood U, Singh Y, Shakarad M, Lal R.	Microb Biotechnol	10.1111/1751-7915.12466	2017
Metabolism	Identification of 9alpha-hydroxy-17-oxo-1,2,3,4,10,19-hexanorandrost-6-en-5-oic acid and beta-oxidation products of the C-17 side chain in cholic acid degradation by Comamonas testosteroni TA441.	Horinouchi M, Hayashi T, Koshino H, Malon M, Hirota H, Kudo T.	J Steroid Biochem Mol Biol	10.1016/j.jsbmb.2014.04.014	2014
	A Genetically Encoded Biosensor for the Detection of Levulinic Acid.	Kim TH, Woo SG, Kim SK, Yoo BH, Shin J, Rha E, Kim SJ, Kwon KK, Lee H, Kim H, Kim HT, Sung BH, Lee SG, Lee DH.	J Microbiol Biotechnol	10.4014/jmb.2301.01021	2023
	Broad diversity of bacteria degrading 17ß-estradiol-3-sulfate isolated from river sediment and biofilm at a wastewater treatment plant discharge.	Mainetti T, Palmisano M, Rezzonico F, Stres B, Kern S, Smits THM.	Arch Microbiol	10.1007/s00203-021-02409-0	2021
	Polymicrobial Bacteremia Involving Comamonas testosteroni.	Orsini J, Tam E, Hauser N, Rajayer S.	Case Rep Med	10.1155/2014/578127	2014
Metabolism	Removal of methyl acrylate by ceramic-packed biotrickling filter and their response to bacterial community.	Wu H, Yin Z, Quan Y, Fang Y, Yin C.	Bioresour Technol	10.1016/j.biortech.2016.03.009	2016
	7beta-Hydroxysteroid dehydratase Hsh3 eliminates the 7-hydroxy group of the bile salt ursodeoxycholate during degradation by Sphingobium sp. strain Chol11 and other Sphingomonadaceae.	Richtsmeier P, Nedielkov R, Haring M, Yucel O, Elsner L, Lulf RH, Wohlbrand L, Rabus R, Moeller H, Philipp B, Mueller FM.	Appl Environ Microbiol	10.1128/aem.00185-25	2025
	Structure and diversity of native bacterial communities in soils contaminated with polychlorinated biphenyls.	Zenteno-Rojas A, Martinez-Romero E, Castaneda-Valbuena D, Rincon-Molina CI, Ruiz-Valdiviezo VM, Meza-Gordillo R, Villalobos-Maldonado JJ, Vences-Guzman MA, Rincon-Rosales R.	AMB Express	10.1186/s13568-020-01058-8	2020
Phylogeny	Comamonas kerstersii bacteremia in a patient with acute perforated appendicitis: A rare case report.	Zhou YH, Ma HX, Dong ZY, Shen MH.	Medicine (Baltimore)	10.1097/md.0000000000009296	2018
Metabolism	Comamonas testosteroni uses a chemoreceptor for tricarboxylic acid cycle intermediates to trigger chemotactic responses towards aromatic compounds.	Ni B, Huang Z, Fan Z, Jiang CY, Liu SJ.	Mol Microbiol	10.1111/mmi.12400	2013
	Comamonas testosteroni-associated peritonitis in a pediatric peritoneal dialysis patient.	Parolin M, Baraldi M, Valentini E, Murer L, Vidal E.	World J Nephrol	10.5527/wjn.v5.i2.220	2016
	Use of Subtherapeutic Tylvalosin Against Mycoplasma hyopneumoniae: Implications For Respiratory Microbiome Dysbiosis and Swine Lung Health.	Toledo LT, Polveiro RC, Diamantino CA, Simao GMR, Pereira CER, Costa EF, Moreira MAS, Marks FS.	Transbound Emerg Dis	10.1155/tbed/8903237	2025
Phylogeny	Distinct Changes Occur in the Human Breast Milk Microbiome Between Early and Established Lactation in Breastfeeding Guatemalan Mothers.	Gonzalez E, Brereton NJB, Li C, Lopez Leyva L, Solomons NW, Agellon LB, Scott ME, Koski KG.	Front Microbiol	10.3389/fmicb.2021.557180	2021
Metabolism	Purification, structural elucidation and bioactivity of tryptophan containing diketopiperazines, from Comamonas testosteroni associated with a rhabditid entomopathogenic nematode against major human-pathogenic bacteria.	Kumar SN, Mohandas C, Nambisan B.	Peptides	10.1016/j.peptides.2013.09.019	2014
	De Novo Iron Oxide Hydroxide, Ferrihydrite Produced by Comamonas testosteroni Exhibiting Intrinsic Peroxidase-Like Activity and Their Analytical Applications.	Ahmed A, Abagana A, Cui D, Zhao M.	Biomed Res Int	10.1155/2019/7127869	2019
	The chemical logic of enzymatic lignin degradation.	Bugg TDH.	Chem Commun (Camb)	10.1039/d3cc05298b	2024
	Unraveling the key drivers of bacterial progesterone degradation.	Hernandez-Fernandez G, Ibero J, Garcia JL, Galan B.	mBio	10.1128/mbio.01077-25	2025
Enzymology	Two cases of bacteremia due to an unusual pathogen, Comamonas testosteroni in Iran and a review literature.	Farshad S, Norouzi F, Aminshahidi M, Heidari B, Alborzi A.	J Infect Dev Ctries	10.3855/jidc.2215	2012
Metabolism	Assimilation of aromatic compounds by Comamonas testosteroni: characterization and spreadability of protocatechuate 4,5-cleavage pathway in bacteria.	Ni B, Zhang Y, Chen DW, Wang BJ, Liu SJ.	Appl Microbiol Biotechnol	10.1007/s00253-012-4402-8	2013
	Influence of Diclofenac on Activated Sludge Bacterial Communities in Fed-Batch Reactors.	Kraigher B, Mandic-Mulec I.	Food Technol Biotechnol	10.17113/ftb.58.04.20.6424	2020
Genetics	First microbiota assessments of children's paddling pool waters evaluated using 16S rRNA gene-based metagenome analysis.	Sawabe T, Suda W, Ohshima K, Hattori M, Sawabe T.	J Infect Public Health	10.1016/j.jiph.2015.11.008	2016
Enzymology	A novel TctA citrate transporter from an activated sludge metagenome: structural and mechanistic predictions for the TTT family.	Batista-Garcia RA, Sanchez-Reyes A, Millan-Pacheco C, Gonzalez-Zuniga VM, Juarez S, Folch-Mallol JL, Pastor N.	Proteins	10.1002/prot.24529	2014
Metabolism	Degradation of norgestrel by bacteria from activated sludge: comparison to progesterone.	Liu S, Ying GG, Liu YS, Peng FQ, He LY.	Environ Sci Technol	10.1021/es304688g	2013
	Review and future outlook for the removal of microplastics by physical, biological and chemical methods in water bodies and wastewaters.	Amparan MAA, Palacios A, Flores GM, Olivera PMC.	Environ Monit Assess	10.1007/s10661-025-13883-0	2025
Enzymology	Construction and application of an expression vector from the new plasmid pLAtc1 of Acidithiobacillus caldus.	Zhang MJ, Jiang CY, You XY, Liu SJ.	Appl Microbiol Biotechnol	10.1007/s00253-014-5507-z	2014
	Nosocomial Infections with IMP-19-Producing Pseudomonas aeruginosa Linked to Contaminated Sinks, France.	Amoureux L, Riedweg K, Chapuis A, Bador J, Siebor E, Pechinot A, Chretien ML, de Curraize C, Neuwirth C.	Emerg Infect Dis	10.3201/eid2302.160649	2017
Enzymology	Comamonas testosteroni peritonitis secondary to dislocated intrauterine device and laparoscopic intervention in a continuous ambulatory peritoneal dialysis patient.	Altun E, Kaya B, Taktakoglu O, Karaer R, Paydas S, Balal M, Seyrek N.	Perit Dial Int	10.3747/pdi.2013.00007	2013
	Dissemination and persistence of antimicrobial resistance (AMR) along the wastewater-river continuum.	Read DS, Gweon HS, Bowes MJ, Anjum MF, Crook DW, Chau KK, Shaw LP, Hubbard A, AbuOun M, Tipper HJ, Hoosdally SJ, Bailey MJ, Walker AS, Stoesser N, REHAB consortium.	Water Res	10.1016/j.watres.2024.122204	2024
	Improving the production of 22-hydroxy-23,24-bisnorchol-4-ene-3-one in Mycolicibacterium smegmatis.	Hernandez-Fernandez G, Acedos MG, de la Torre I, Ibero J, Garcia JL, Galan B.	Microb Biotechnol	10.1111/1751-7915.14551	2024
	Optimization of RNA extraction for bacterial whole transcriptome studies of low-biomass samples.	Verbeelen T, Van Houdt R, Leys N, Ganigue R, Mastroleo F.	iScience	10.1016/j.isci.2022.105311	2022
	Clinical characteristics and antimicrobial therapy of healthcare-associated carbapenem-non-susceptible gram-negative bacterial meningitis: a 16-year retrospective cohort study.	Xu J, Du X, Li D, Li P, Guo Q, Xu X, Hu F, Wang M.	BMC Infect Dis	10.1186/s12879-024-09237-9	2024
Metabolism	Oligomerization and negative autoregulation of the LysR-type transcriptional regulator HsdR from Comamonas testosteroni.	Gong W, Xiong G, Maser E.	J Steroid Biochem Mol Biol	10.1016/j.jsbmb.2012.05.012	2012
Enzymology	Isolation and Characterization of Highly Active Uricase from Alcaligenes spp. Strain UR1.	Alshareef A, El-Readi MZ, Neyaz LA, Abulreesh HH, Alsaigh AA, Khalel AF, Alshehri WA, Elbanna K.	Pol J Microbiol	10.33073/pjm-2025-009	2025
Metabolism	MhpA Is a Hydroxylase Catalyzing the Initial Reaction of 3-(3-Hydroxyphenyl)Propionate Catabolism in Escherichia coli K-12.	Xu Y, Zhou NY.	Appl Environ Microbiol	10.1128/aem.02385-19	2020
	Chemotactic Interactions of Scenedesmus sp. and Azospirillum brasilense Investigated by Microfluidic Methods.	Greipel E, Nagy K, Csakvari E, Der L, Galajda P, Kutasi J.	Microb Ecol	10.1007/s00248-024-02366-3	2024
Metabolism	Effective Remediation Strategy for Xenobiotic Zoxamide by Pure Bacterial Strains, Escherichia coli, Streptococcus pyogenes, and Streptococcus pneumoniae.	Ahmad KS, Sajid A, Gul MM, Ali D.	Biomed Res Int	10.1155/2020/5352427	2020
	Enzymatic post-consumer poly(ethylene terephthalate) (PET) depolymerization using commercial enzymes.	Brackmann R, de Oliveira Veloso C, de Castro AM, Langone MAP.	3 Biotech	10.1007/s13205-023-03555-6	2023
	Rapid detection of a novel B1-beta-lactamase gene, blaAFM-1 using a loop-mediated isothermal amplification (LAMP) assay.	Qin Y, Duan X, Peng Y, Rui Y.	Ann Clin Microbiol Antimicrob	10.1186/s12941-021-00486-z	2021
Enzymology	Catheter-related bacteremia caused by Comamonas testosteroni in a hemodialysis patient.	Nseir W, Khateeb J, Awawdeh M, Ghali M.	Hemodial Int	10.1111/j.1542-4758.2010.00524.x	2011
	Chemosensory systems interact to shape relevant traits for bacterial plant pathogenesis.	Munar-Palmer M, Santamaria-Hernando S, Liedtke J, Ortega DR, Lopez-Torrejon G, Rodriguez-Herva JJ, Briegel A, Lopez-Solanilla E.	mBio	10.1128/mbio.00871-24	2024
Metabolism	Disproportionate Carbon Dioxide Efflux in Bacterial Metabolic Pathways for Different Organic Substrates Leads to Variable Contribution to Carbon-Use Efficiency.	Mendonca CM, Zhang L, Waldbauer JR, Aristilde L.	Environ Sci Technol	10.1021/acs.est.4c01328	2024
Genetics	Targeted genome mining with GATOR-GC maps the evolutionary landscape of biosynthetic diversity.	Cediel-Becerra JDD, Cumsille A, Guerra S, Ding Y, de Crecy-Lagard V, Chevrette MG.	Nucleic Acids Res	10.1093/nar/gkaf606	2025
	Microbiome of the freshwater sponge Ephydatia muelleri shares compositional and functional similarities with those of marine sponges.	Sugden S, Holert J, Cardenas E, Mohn WW, Stein LY.	ISME J	10.1038/s41396-022-01296-7	2022
	Regulation of Class A beta-Lactamase CzoA by CzoR and IscR in Comamonas testosteroni S44.	Zhuang W, Liu H, Li J, Chen L, Wang G.	Front Microbiol	10.3389/fmicb.2017.02573	2017
	Ancient dental calculus reveals oral microbiome shifts associated with lifestyle and disease in Great Britain.	Gancz AS, Farrer AG, Nixon MP, Wright S, Arriola L, Adler C, Davenport ER, Gully N, Cooper A, Britton K, Dobney K, Silverman JD, Weyrich LS.	Nat Microbiol	10.1038/s41564-023-01527-3	2023
Biotechnology	Bacterial Species in Engineered Living Materials: Strategies and Future Directions.	Wang H, Li C, Wang Y, Zhang H.	Microb Biotechnol	10.1111/1751-7915.70164	2025
Proteome	Characterization of the pH-dependent protein stability of 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase by differential scanning fluorimetry.	Chou YH, Hsieh CL, Chen YL, Wang TP, Wu WJ, Hwang CC.	Protein Sci	10.1002/pro.4710	2023
	A complete nicotinate degradation pathway in the microbial eukaryote Aspergillus nidulans.	Bokor E, Amon J, Varga M, Szekeres A, Hegedus Z, Jakusch T, Szakonyi Z, Flipphi M, Vagvolgyi C, Gacser A, Scazzocchio C, Hamari Z.	Commun Biol	10.1038/s42003-022-03684-3	2022
	Conversion of fat-containing waste from the margarine manufacturing process into bacterial polyhydroxyalkanoates.	Morais C, Freitas F, Cruz MV, Paiva A, Dionisio M, Reis MA.	Int J Biol Macromol	10.1016/j.ijbiomac.2014.04.044	2014
Metabolism	Evidence for cooperative mineralization of diuron by Arthrobacter sp. BS2 and Achromobacter sp. SP1 isolated from a mixed culture enriched from diuron exposed environments.	Devers-Lamrani M, Pesce S, Rouard N, Martin-Laurent F.	Chemosphere	10.1016/j.chemosphere.2014.06.080	2014
Metabolism	Microbial metabolism and community structure in response to bioelectrochemically enhanced remediation of petroleum hydrocarbon-contaminated soil.	Lu L, Huggins T, Jin S, Zuo Y, Ren ZJ.	Environ Sci Technol	10.1021/es4057906	2014
Phylogeny	Collinsella aerofaciens as a predictive marker of response to probiotic treatment in non-constipated irritable bowel syndrome.	Gargari G, Mantegazza G, Cremon C, Taverniti V, Valenza A, Barbaro MR, Marasco G, Duncan R, Fiore W, Ferrari R, De Vitis V, Barbara G, Guglielmetti S.	Gut Microbes	10.1080/19490976.2023.2298246	2024
Enzymology	Comamonas testosteroni infection in Taiwan: Reported two cases and literature review.	Tsui TL, Tsao SM, Liu KS, Chen TY, Wang YL, Teng YH, Lee YT.	J Microbiol Immunol Infect	10.1016/j.jmii.2011.01.013	2011
	Comamonas testosteroni: An Unusual Bacteria Associated with Acute Appendicitis.	Bayhan GI, Tanir G, Karaman I, Ozkan S.	Balkan Med J	10.5152/balkanmedj.2013.9135	2013
	Modeling bacterial interactions uncovers the importance of outliers in the coastal lignin-degrading consortium.	Peng Q, Zhao C, Wang X, Cheng K, Wang C, Xu X, Lin L.	Nat Commun	10.1038/s41467-025-56012-8	2025
Metabolism	Steroid degradation in Comamonas testosteroni.	Horinouchi M, Hayashi T, Kudo T.	J Steroid Biochem Mol Biol	10.1016/j.jsbmb.2010.10.008	2012
Metabolism	Functional Expression and Characterization of a Panel of Cobalt and Iron-Dependent Nitrile Hydratases.	Grill B, Glanzer M, Schwab H, Steiner K, Pienaar D, Brady D, Donsbach K, Winkler M.	Molecules	10.3390/molecules25112521	2020
	LD-transpeptidation is crucial for fitness and polar growth in Agrobacterium tumefaciens.	Aliashkevich A, Guest T, Alvarez L, Gilmore MC, Rea D, Amstutz J, Mateus A, Schiffthaler B, Ruiz I, Typas A, Savitski MM, Brown PJB, Cava F.	PLoS Genet	10.1371/journal.pgen.1011449	2024
	Toward Biorecycling: Isolation of a Soil Bacterium That Grows on a Polyurethane Oligomer and Monomer.	Espinosa MJC, Blanco AC, Schmidgall T, Atanasoff-Kardjalieff AK, Kappelmeyer U, Tischler D, Pieper DH, Heipieper HJ, Eberlein C.	Front Microbiol	10.3389/fmicb.2020.00404	2020
	Plasmid-Borne AFM Alleles in Pseudomonas aeruginosa Clinical Isolates from China.	Chen M, Cai H, Li Y, Wang N, Zhang P, Hua X, Yu Y, Sun R.	Microbiol Spectr	10.1128/spectrum.02035-22	2022
Metabolism	Isolation and partial characterization of extracellular NADPH-dependent phenol hydroxylase oxidizing phenol to catechol in Comamonas testosteroni.	Turek M, Vilimkova L, Kremlackova V, Paca J, Halecky M, Paca J, Stiborova M.	Neuro Endocrinol Lett		2011
	Utilization of orange peel waste for sustainable amino acid production by Corynebacterium glutamicum.	Junker N, Sariyar Akbulut B, Wendisch VF.	Front Bioeng Biotechnol	10.3389/fbioe.2024.1419444	2024
	Crystal structure of the polyketide cyclase from Mycobacterium tuberculosis.	Zhuang J, Fan S, Guo C, Feng L, Wang H, Lin D, Liao X.	Acta Biochim Biophys Sin (Shanghai)	10.3724/abbs.2022033	2022
	Culture-based study on the development of antibiotic resistance in a biological wastewater system treating stepwise increasing doses of streptomycin.	Selvaraj GK, Tian Z, Zhang H, Jayaraman M, Yang M, Zhang Y.	AMB Express	10.1186/s13568-018-0539-x	2018
	A program to improve the quality of dental unit water in a medical center.	Chang SP, Jiang HL, Wang YC, Chao HC, Lee JJ, Chung HC, Wang LS, Ding DC, Ding DC.	Medicine (Baltimore)	10.1097/md.0000000000028019	2021
	The role of mobile genetic elements in organic micropollutant degradation during biological wastewater treatment.	Rios Miguel AB, Jetten MSM, Welte CU.	Water Res X	10.1016/j.wroa.2020.100065	2020
	Single Molecule Real-Time Sequencing and Traditional Cultivation Techniques Reveal Complex Community Structures and Regional Variations of Psychrotrophic Bacteria in Raw Milk.	Du B, Meng L, Liu H, Zheng N, Zhang Y, Zhao S, Wang J.	Front Microbiol	10.3389/fmicb.2022.853263	2022
Metabolism	Delineation of Steroid-Degrading Microorganisms through Comparative Genomic Analysis.	Bergstrand LH, Cardenas E, Holert J, Van Hamme JD, Mohn WW.	mBio	10.1128/mbio.00166-16	2016
	Competition and cooperation: The plasticity of bacterial interactions across environments.	Solowiej-Wedderburn J, Pentz JT, Lizana L, Schroeder BO, Lind PA, Libby E.	PLoS Comput Biol	10.1371/journal.pcbi.1013213	2025
	Bioanodes/biocathodes formed at optimal potentials enhance subsequent pentachlorophenol degradation and power generation from microbial fuel cells.	Huang L, Wang Q, Quan X, Liu Y, Chen G.	Bioelectrochemistry	10.1016/j.bioelechem.2013.05.001	2013
	Synthetic-biology approach for plant lignocellulose engineering.	Yoshida K, Sakamoto S, Mitsuda N.	Plant Biotechnol (Tokyo)	10.5511/plantbiotechnology.24.0630a	2024
Metabolism	The Comamonas testosteroni steroid biosensor system (COSS)--reflection on other methods.	Maser E, Xiong G.	J Steroid Biochem Mol Biol	10.1016/j.jsbmb.2010.06.005	2010
Pathogenicity	Influence of 3-Chloroaniline on the Biofilm Lifestyle of Comamonas testosteroni and Its Implications on Bioaugmentation.	Wu Y, Mohanty A, Chia WS, Cao B.	Appl Environ Microbiol	10.1128/aem.00874-16	2016
	Evaluation of Vitek®2 performance for colistin susceptibility testing for Gram-negative isolates.	Khurana S, Malhotra R, Mathur P.	JAC Antimicrob Resist	10.1093/jacamr/dlaa101	2020
Metabolism	Testosterone Degradative Pathway of Novosphingobium tardaugens.	Ibero J, Galan B, Diaz E, Garcia JL.	Genes (Basel)	10.3390/genes10110871	2019
Metabolism	Homology modeling and docking studies of Comamonas testosteroni B-356 biphenyl-2,3-dioxygenase involved in degradation of polychlorinated biphenyls.	Baig MS, Manickam N.	Int J Biol Macromol	10.1016/j.ijbiomac.2009.10.014	2010
Enzymology	Post-operative endophthalmitis due to an unusual pathogen, Comamonas testosteroni.	Reddy AK, Murthy SI, Jalali S, Gopinathan U.	J Med Microbiol	10.1099/jmm.0.006072-0	2009
	Counterclockwise rotation of the flagellum promotes biofilm initiation in Helicobacter pylori.	Liu X, Lertsethtakarn P, Mariscal VT, Yildiz F, Ottemann KM.	mBio	10.1128/mbio.00440-24	2024
	Factors affecting performance and functional stratification of membrane-aerated biofilms with a counter-diffusion configuration.	Li T, Liu J.	RSC Adv	10.1039/c9ra03128f	2019
Metabolism	Multi-enzymatic one-pot reduction of dehydrocholic acid to 12-keto-ursodeoxycholic acid with whole-cell biocatalysts.	Sun B, Kantzow C, Bresch S, Castiglione K, Weuster-Botz D.	Biotechnol Bioeng	10.1002/bit.24606	2013
	Analysis of the bacterial diversity existing on animal hide and wool: development of a preliminary PCR-restriction fragment length polymorphism fingerprint database for identifying isolates.	Chen Y, Gao H, Zhang Y, Deng M, Wu Z, Zhu L, Duan Q, Xu B, Liang C, Yue Z, Xiao X.	J AOAC Int	10.5740/jaoacint.11-482	2012
Enzymology	Functional analysis, diversity, and distribution of the ean cluster responsible for 17beta-estradiol degradation in sphingomonads.	Zhang M, Gao S, Pan K, Liu H, Li Q, Bai X, Zhu Q, Chen Z, Yan X, Hong Q.	Appl Environ Microbiol	10.1128/aem.01974-23	2024
	A case of Wohlfahrtiimonas chitiniclastica bacteremia in continental United States.	Chavez JA, Alexander AJ, Balada-Llasat JM, Pancholi P.	JMM Case Rep	10.1099/jmmcr.0.005134	2017
Enzymology	Comamonas testosteroni meningitis in a homeless man.	Jin L, Perper JA, Cina SJ.	J Forensic Sci	10.1111/j.1556-4029.2008.00810.x	2008
	Effects of microbial species, organic loading and substrate degradation rate on the power generation capability of microbial fuel cells	Juang DF, Yang PC, Chou HY, Chiu LJ.	Biotechnol Lett		2011
Metabolism	Novel whole-cell biocatalysts with recombinant hydroxysteroid dehydrogenases for the asymmetric reduction of dehydrocholic acid.	Braun M, Sun B, Anselment B, Weuster-Botz D.	Appl Microbiol Biotechnol	10.1007/s00253-012-4072-6	2012
	Degradation of 2,4,6-Trinitrotoluene (TNT): Involvement of Protocatechuate 3,4-Dioxygenase (P34O) in Buttiauxella sp. S19-1.	Xu M, Liu D, Sun P, Li Y, Wu M, Liu W, Maser E, Xiong G, Guo L.	Toxics	10.3390/toxics9100231	2021
Metabolism	Regulation of testosterone degradation in Comamonas testosteroni.	Linares M, Pruneda-Paz JL, Reyna L, Genti-Raimondi S.	J Steroid Biochem Mol Biol	10.1016/j.jsbmb.2008.09.011	2008
Pathogenicity	Supercarriers of antibiotic resistome in a world's large river.	Wang J, Pan R, Dong P, Liu S, Chen Q, Borthwick AGL, Sun L, Xu N, Ni J.	Microbiome	10.1186/s40168-022-01294-z	2022
Enzymology	Role of S114 in the NADH-induced conformational change and catalysis of 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni.	Chang YH, Huang TJ, Chuang LY, Hwang CC.	Biochim Biophys Acta	10.1016/j.bbapap.2009.06.006	2009
	Classifying Interactions in a Synthetic Bacterial Community Is Hindered by Inhibitory Growth Medium.	Dos Santos AR, Di Martino R, Testa SEA, Mitri S.	mSystems	10.1128/msystems.00239-22	2022
Enzymology	Analyzing the catalytic mechanism of the Fe-type nitrile hydratase from Comamonas testosteroni Ni1.	Rao S, Holz RC.	Biochemistry	10.1021/bi801623t	2008
	Human Infections by Wohlfahrtiimonas chitiniclastica: A Mini-Review and the First Report of a Burn Wound Infection after Accidental Myiasis in Central Europe.	Hladik M, Lipovy B, Kaloudova Y, Hanslianova M, Vitkova I, Deissova T, Kempny T, Svoboda M, Kala Z, Brychta P, Borilova Linhartova P.	Microorganisms	10.3390/microorganisms9091934	2021
Enzymology	Dynamic changes in bacterial communities in the recirculating nutrient solution of cucumber plug seedlings cultivated in an ebb-and-flow subirrigation system.	Dong CJ, Li Q, Wang LL, Shang QM.	PLoS One	10.1371/journal.pone.0232446	2020
	Optimization and Impurity Control Strategy for Lithocholic Acid Production Using Commercially Plant-Sourced Bisnoralcohol.	Zeng C, Xu S, Yin Z, Cui Y, Xu X, Li N.	ACS Omega	10.1021/acsomega.3c02548	2023
Pathogenicity	Adalimumab Therapy Restores the Gut Microbiota in Patients With Ankylosing Spondylitis.	Chen Z, Zheng X, Wu X, Wu J, Li X, Wei Q, Zhang X, Fang L, Jin O, Gu J.	Front Immunol	10.3389/fimmu.2021.700570	2021
Metabolism	Genome-Wide Transcriptome Profiling Provides Insight on Cholesterol and Lithocholate Degradation Mechanisms in Nocardioides simplex VKM Ac-2033D.	Shtratnikova VY, Schelkunov MI, Fokina VV, Bragin EY, Lobastova TG, Shutov AA, Kazantsev AV, Donova MV.	Genes (Basel)	10.3390/genes11101229	2020
Metabolism	A Preorganized Electric Field Leads to Minimal Geometrical Reorientation in the Catalytic Reaction of Ketosteroid Isomerase.	Wu Y, Fried SD, Boxer SG.	J Am Chem Soc	10.1021/jacs.0c00383	2020
Pathogenicity	Potential of Escherichia coli O157:H7 to persist and form viable but non-culturable cells on a food-contact surface subjected to cycles of soiling and chemical treatment.	Marouani-Gadri N, Firmesse O, Chassaing D, Sandris-Nielsen D, Arneborg N, Carpentier B.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2010.09.002	2010
Metabolism	Effects of microbial species, organic loading and substrate degradation rate on the power generation capability of microbial fuel cells.	Juang DF, Yang PC, Chou HY, Chiu LJ.	Biotechnol Lett	10.1007/s10529-011-0690-9	2011
Metabolism	Effects of entrapment on nucleic acid content, cell morphology, cell surface property, and stress of pure cultures commonly found in biological wastewater treatment.	Pramanik S, Khanna R, Katti K, McEvoy J, Khan E.	Appl Microbiol Biotechnol	10.1007/s00253-011-3393-1	2011
	Cross Talk between Chemosensory Pathways That Modulate Chemotaxis and Biofilm Formation.	Huang Z, Wang YH, Zhu HZ, Andrianova EP, Jiang CY, Li D, Ma L, Feng J, Liu ZP, Xiang H, Zhulin IB, Liu SJ.	mBio	10.1128/mbio.02876-18	2019
Metabolism	Bioaugmentation of activated sludge towards 3-chloroaniline removal with a mixed bacterial population carrying a degradative plasmid.	Bathe S, Schwarzenbeck N, Hausner M.	Bioresour Technol	10.1016/j.biortech.2009.01.060	2009
Enzymology	Comamonas testosteroni bacteremia in a patient with perforated acute appendicitis. Short communication.	Gul M, Ciragil P, Bulbuloglu E, Aral M, Alkis S, Ezberci F.	Acta Microbiol Immunol Hung	10.1556/amicr.54.2007.3.6	2007
Metabolism	Testosterone-inducible regulator is a kinase that drives steroid sensing and metabolism in Comamonas testosteroni.	Gohler A, Xiong G, Paulsen S, Trentmann G, Maser E.	J Biol Chem	10.1074/jbc.m710166200	2008
	Correlation Between Gut Microbiota and Testosterone in Male Patients With Type 2 Diabetes Mellitus.	Liu S, Cao R, Liu L, Lv Y, Qi X, Yuan Z, Fan X, Yu C, Guan Q.	Front Endocrinol (Lausanne)	10.3389/fendo.2022.836485	2022
	Genome Sequence Analysis of Two Pseudomonas putida Strains to Identify a 17-Hydroxylase Putatively Involved in Sparteine Degradation.	Detheridge AP, Griffith GW, Hopper DJ.	Curr Microbiol	10.1007/s00284-018-1573-2	2018
Genetics	Genome-wide identification of resistance genes and response mechanism analysis of key gene knockout strain to catechol in Saccharomyces cerevisiae	Liao H, Li Q, Chen Y, Tang J, Mou B, Lu F, Feng P, Li W, Li J, Fu C, Long W, Xiao X, Han X, Xin W, Yang F, Ma M, Liu B, Yang Y, Wang H.	Front Microbiol		2024
	Global Regulator IscR Positively Contributes to Antimonite Resistance and Oxidation in Comamonas testosteroni S44.	Liu H, Zhuang W, Zhang S, Rensing C, Huang J, Li J, Wang G.	Front Mol Biosci	10.3389/fmolb.2015.00070	2015
Enzymology	Identification of a thiolase gene essential for beta-oxidation of the acyl side chain of the steroid compound cholate in Pseudomonas sp. strain Chol1.	Birkenmaier A, Moller HM, Philipp B.	FEMS Microbiol Lett	10.1111/j.1574-6968.2011.02250.x	2011
	Strong correlation of total phenotypic resistance of samples from household environments and the prevalence of class 1 integrons suggests for the use of the relative prevalence of intI1 as a screening tool for multi-resistance.	Lucassen R, Rehberg L, Heyden M, Bockmuhl D.	PLoS One	10.1371/journal.pone.0218277	2019
	Microbial community succession and volatile compounds changes during spontaneous fermentation of Cabernet Sauvignon (Vitis vinifera L.) under rain-shelter cultivation.	Huang R, Jiang J, Su Y, Yu H, Shen L, Liu Y, Qin Y, Song Y.	Food Chem X	10.1016/j.fochx.2023.100618	2023
Metabolism	3alpha-Hydroxysteroid dehydrogenase/carbonyl reductase as a tool for isolation and characterization of a new marine steroid degrading bacterial strain.	Xiong G, Draus E, Luo Y, Maser E.	Chem Biol Interact	10.1016/j.cbi.2008.10.033	2009
Enzymology	Mechanism of proton transfer in the 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni.	Chang YH, Chuang LY, Hwang CC.	J Biol Chem	10.1074/jbc.m706336200	2007
Metabolism	Initial steps in anoxic testosterone degradation by Steroidobacter denitrificans.	Chiang YR, Fang JY, Ismail W, Wang PH.	Microbiology (Reading)	10.1099/mic.0.037788-0	2010
Metabolism	Membrane topology of aspartate:alanine antiporter AspT from Comamonas testosteroni.	Fujiki T, Nanatani K, Nishitani K, Yagi K, Ohnishi F, Yoneyama H, Uchida T, Nakajima T, Abea K.	J Biochem	10.1093/jb/mvm010	2007
Metabolism	Cis- and trans-regulatory elements of 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase as biosensor system for steroid determination in the environment.	Xiong G, Luo Y, Jin S, Maser E.	Chem Biol Interact	10.1016/j.cbi.2008.10.012	2009
	Screening of Endophytic Bacteria of Leucojum aestivum 'Gravety Giant' as a Potential Source of Alkaloids and as Antagonist to Some Plant Fungal Pathogens.	Munakata Y, Spina R, Slezack-Deschaumes S, Genestier J, Hehn A, Laurain-Mattar D.	Microorganisms	10.3390/microorganisms10102089	2022
	Monoassociation with bacterial isolates reveals the role of colonization, community complexity and abundance on locomotor behavior in larval zebrafish.	Weitekamp CA, Kvasnicka A, Keely SP, Brinkman NE, Howey XM, Gaballah S, Phelps D, Catron T, Zurlinden T, Wheaton E, Tal T.	Anim Microbiome	10.1186/s42523-020-00069-x	2021
Metabolism	Identification of a new steroid degrading bacterial strain H5 from the Baltic Sea and isolation of two estradiol inducible genes.	Sang Y, Xiong G, Maser E.	J Steroid Biochem Mol Biol	10.1016/j.jsbmb.2011.01.018	2012
Enzymology	Steroid degradation and two steroid-inducible enzymes in the marine bacterium H5.	Sang Y, Xiong G, Maser E.	Chem Biol Interact	10.1016/j.cbi.2011.01.027	2011
	Defining Two Chemosensory Arrays in Shewanella oneidensis.	Fortier EM, Bouillet S, Infossi P, Ali Chaouche A, Espinosa L, Giudici-Orticoni MT, Mauriello EMF, Iobbi-Nivol C.	Biomolecules	10.3390/biom13010021	2022
	15N NMR relaxation studies of Y14F mutant of ketosteroid isomerase: the influence of mutation on backbone mobility.	Lee HJ, Yoon YJ, Jang DS, Kim C, Cha HJ, Hong BH, Choi KY, Lee HC.	J Biochem	10.1093/jb/mvn053	2008
Enzymology	Intra-abdominal infections due to Comamonas kerstersii.	Almuzara MN, Cittadini R, Vera Ocampo C, Bakai R, Traglia G, Ramirez MS, del Castillo M, Vay CA.	J Clin Microbiol	10.1128/jcm.00659-13	2013
Metabolism	Molecular processes underlying synergistic linuron mineralization in a triple-species bacterial consortium biofilm revealed by differential transcriptomics.	Albers P, Weytjens B, De Mot R, Marchal K, Springael D.	Microbiologyopen	10.1002/mbo3.559	2018
	Potential routes of plastics biotransformation involving novel plastizymes revealed by global multi-omic analysis of plastic associated microbes.	Ridley RS, Conrad RE, Lindner BG, Woo S, Konstantinidis KT.	Sci Rep	10.1038/s41598-024-59279-x	2024
	Molecular diversity of katG genes in the soil bacteria Comamonas.	Godocikova J, Zamocky M, Buckova M, Obinger C, Polek B.	Arch Microbiol	10.1007/s00203-009-0541-4	2010
	A peek into mass mortality caused by antimicrobial resistant Edwardsiella tarda in goldfish, Carassius auratus in Kerala.	Preena PG, Dharmaratnam A, Swaminathan TR.	Biologia (Bratisl)	10.1007/s11756-022-01007-9	2022
Enzymology	Understanding oligomerization in 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni: an in silico approach and evidence for an active protein.	Hoffmann F, Sotriffer C, Evers A, Xiong G, Maser E.	J Biotechnol	10.1016/j.jbiotec.2006.11.024	2007
	A new class of protein sensor links spirochete pleomorphism, persistence, and chemotaxis.	Muok AR, Kurniyati K, Cassidy CK, Olsthoorn FA, Ortega DR, Mabrouk AS, Li C, Briegel A.	mBio	10.1128/mbio.01598-23	2023
Pathogenicity	Antibiotic susceptibility profiles of uncommon bacterial species causing severe infections in Italy.	Nicolosi D, Nicolosi VM, Cappellani A, Nicoletti G, Blandino G.	J Chemother	10.1179/joc.2009.21.3.253	2009
Metabolism	Crystal structure of 3-hydroxybenzoate hydroxylase from Comamonas testosteroni has a large tunnel for substrate and oxygen access to the active site.	Hiromoto T, Fujiwara S, Hosokawa K, Yamaguchi H.	J Mol Biol	10.1016/j.jmb.2006.09.031	2006
	Estrone degrading enzymes of Spirulina CPCC-695 and synthesis of bioplastic precursor as a by-product.	Sami N, Ansari S, Yasin D, Fatma T.	Biotechnol Rep (Amst)	10.1016/j.btre.2020.e00464	2020
Metabolism	Thiosulfate oxidation by Comamonas sp. S23 isolated from a sulfur spring.	Pandey SK, Narayan KD, Bandyopadhyay S, Nayak KC, Das SK.	Curr Microbiol	10.1007/s00284-009-9357-3	2009
	Isolation of Microbulbifer sp. SOL66 with High Polyhydroxyalkanoate-Degrading Activity from the Marine Environment.	Park SL, Cho JY, Kim SH, Bhatia SK, Gurav R, Park SH, Park K, Yang YH.	Polymers (Basel)	10.3390/polym13234257	2021
Enzymology	[Isolation and identification of Comamonas testosteroni: cloning and overexpression of 3alpha-hydroxysteroid dehydrogenase in E.coli].	Zhang GH, Cong AR, Xu GB, Sun LY, Yan Y, Xia TA.	Beijing Da Xue Xue Bao Yi Xue Ban		2005
Metabolism	Influence of cobalt substitution on the activity of iron-type nitrile hydratase: are cobalt type nitrile hydratases regulated by carbon monoxide?	Sari MA, Jaouen M, Saroja NR, Artaud I.	J Inorg Biochem	10.1016/j.jinorgbio.2006.12.005	2007
Enzymology	Coexistence of free-living amoebae and bacteria in selected South African hospital water distribution systems.	Muchesa P, Leifels M, Jurzik L, Hoorzook KB, Barnard TG, Bartie C.	Parasitol Res	10.1007/s00436-016-5271-3	2017
	Characterization and Process Optimization for Enhanced Production of Polyhydroxybutyrate (PHB)-Based Biodegradable Polymer from Bacillus flexus Isolated from Municipal Solid Waste Landfill Site.	Adnan M, Siddiqui AJ, Ashraf SA, Snoussi M, Badraoui R, Ibrahim AMM, Alreshidi M, Sachidanandan M, Patel M.	Polymers (Basel)	10.3390/polym15061407	2023
Metabolism	Benzoate metabolism intermediate benzoyl coenzyme A affects gentisate pathway regulation in Comamonas testosteroni.	Chen DW, Zhang Y, Jiang CY, Liu SJ.	Appl Environ Microbiol	10.1128/aem.01146-14	2014
Metabolism	Two enzymes of a complete degradation pathway for linear alkylbenzenesulfonate (LAS) surfactants: 4-sulfoacetophenone Baeyer-Villiger monooxygenase and 4-sulfophenylacetate esterase in Comamonas testosteroni KF-1.	Weiss M, Denger K, Huhn T, Schleheck D.	Appl Environ Microbiol	10.1128/aem.02412-12	2012
Metabolism	A Novel Steroid-Coenzyme A Ligase from Novosphingobium sp. Strain Chol11 Is Essential for an Alternative Degradation Pathway for Bile Salts.	Yucel O, Holert J, Ludwig KC, Thierbach S, Philipp B.	Appl Environ Microbiol	10.1128/aem.01492-17	2018
Metabolism	Treatment of naphthalene-2-sulfonic acid from tannery wastewater by a granular activated carbon fixed bed inoculated with bacterial isolates Arthrobacter globiformis and Comamonas testosteroni.	Song Z, Edwards SR, Burns RG.	Water Res	10.1016/j.watres.2005.11.035	2006
Phylogeny	Impact of membrane fatty acid composition on the uncoupling sensitivity of the energy conservation of Comamonas testosteroni ATCC 17454.	Loffhagen N, Hartig C, Harms H.	Appl Microbiol Biotechnol	10.1007/s00253-005-0104-9	2006
	Kemp Eliminases of the AlleyCat Family Possess High Substrate Promiscuity.	Caselle EA, Yoon JH, Bhattacharya S, Rempillo JJL, Lengyel Z, D'Souza A, Moroz YS, Tolbert PL, Volkov AN, Forconi M, Castaneda CA, Makhlynets OV, Korendovych IV.	ChemCatChem	10.1002/cctc.201801994	2019
Metabolism	Biosynthesis of medium chain length poly(3-hydroxyalkanoates) (mcl-PHAs) by Comamonas testosteroni during cultivation on vegetable oils.	Thakor N, Trivedi U, Patel KC.	Bioresour Technol	10.1016/j.biortech.2005.01.030	2005
Metabolism	Metabolism of dibenzofuran and dibenzo-p-dioxin by the biphenyl dioxygenase of Burkholderia xenovorans LB400 and Comamonas testosteroni B-356.	L'Abbee JB, Barriault D, Sylvestre M.	Appl Microbiol Biotechnol	10.1007/s00253-004-1791-3	2005
Enzymology	Over-expression in Escherichia coli of a thermally stable and regio-selective nitrile hydratase from Comamonas testosteroni 5-MGAM-4D.	Petrillo KL, Wu S, Hann EC, Cooling FB, Ben-Bassat A, Gavagan JE, DiCosimo R, Payne MS.	Appl Microbiol Biotechnol	10.1007/s00253-004-1842-9	2005
Genetics	Genomic and resistome analysis of Alcaligenes faecalis strain PGB1 by Nanopore MinION and Illumina Technologies.	Lang J, Li Y, Yang W, Dong R, Liang Y, Liu J, Chen L, Wang W, Ji B, Tian G, Che N, Meng B.	BMC Genomics	10.1186/s12864-022-08507-7	2022
Enzymology	[Microbial community structure of beer wastewater treatment plants analyzed by PCR-DGGE technique].	Zhao JH, He SY, Li JX, Liu YD, Lou Y.	Huan Jing Ke Xue		2008
	Recent Records on Bacterial Opportunistic Infections via the Dietary Route.	Rossi F, Santonicola S, Amadoro C, Marino L, Colavita G.	Microorganisms	10.3390/microorganisms12010069	2023
Metabolism	Cloning the bacterial bphC gene into Nicotiana tabacum to improve the efficiency of PCB phytoremediation.	Novakova M, Mackova M, Chrastilova Z, Viktorova J, Szekeres M, Demnerova K, Macek T.	Biotechnol Bioeng	10.1002/bit.22038	2009
Metabolism	Removal of nitriles from synthetic wastewater by acrylonitrile utilizing bacteria.	Wang CC, Lee CM, Chen LJ.	J Environ Sci Health A Tox Hazard Subst Environ Eng	10.1081/ese-120037876	2004
	Microbial Journey: Mount Everest to Mars.	Sood U, Dhingra GG, Anand S, Hira P, Kumar R, Kaur J, Verma M, Singhvi N, Lal S, Rawat CD, Singh VK, Kaur J, Verma H, Tripathi C, Singh P, Dua A, Saxena A, Phartyal R, Jayaraj P, Makhija S, Gupta R, Sahni S, Nayyar N, Abraham JS, Somasundaram S, Lata P, Solanki R, Mahato NK, Prakash O, Bala K, Kumari R, Toteja R, Kalia VC, Lal R.	Indian J Microbiol	10.1007/s12088-022-01029-6	2022
	Bacterial pathogens in pediatric appendicitis: a comprehensive retrospective study.	Felber J, Gross B, Rahrisch A, Waltersbacher E, Trips E, Schrottner P, Fitze G, Schultz J.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1027769	2023
Pathogenicity	Switching Lifestyles Is an in vivo Adaptive Strategy of Bacterial Pathogens.	Desai SK, Kenney LJ.	Front Cell Infect Microbiol	10.3389/fcimb.2019.00421	2019
Metabolism	Antagonistic control of a dual-input mammalian gene switch by food additives.	Xie M, Ye H, Hamri GC, Fussenegger M.	Nucleic Acids Res	10.1093/nar/gku545	2014
Genetics	Genomic Analysis of Carbapenem-Resistant Comamonas in Water Matrices: Implications for Public Health and Wastewater Treatments.	Hem S, Wyrsch ER, Drigo B, Baker DJ, Charles IG, Donner E, Jarocki VM, Djordjevic SP.	Appl Environ Microbiol	10.1128/aem.00646-22	2022
Enzymology	Comamonas (Pseudomonas) testosteroni endocarditis.	Cooper GR, Staples ED, Iczkowski KA, Clancy CJ.	Cardiovasc Pathol	10.1016/j.carpath.2005.01.008	2005
Phylogeny	Identification of Comamonas species using 16S rRNA gene sequence.	Yadav V, Prakash S, Srivastava S, Verma PC, Gupta V, Basu V, Rawat AK.	Bioinformation	10.6026/97320630003381	2009
Metabolism	Mechanistic roles of Ser-114, Tyr-155, and Lys-159 in 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni.	Hwang CC, Chang YH, Hsu CN, Hsu HH, Li CW, Pon HI.	J Biol Chem	10.1074/jbc.m411751200	2005
	Application of Nanopore Sequencing (MinION) for the Analysis of Bacteriome and Resistome of Bean Sprouts.	Solcova M, Demnerova K, Purkrtova S.	Microorganisms	10.3390/microorganisms9050937	2021
Metabolism	Depolymerisation and biodegradation of a synthetic tanning agent by activated sludges, the bacteria Arthrobacter globiformis and Comamonas testosteroni, and the fungus Cunninghamella polymorpha.	Song Z, Burns RG.	Biodegradation	10.1007/s10532-004-1723-z	2005
	Life History Recorded in the Vagino-cervical Microbiome Along with Multi-omes.	Jie Z, Chen C, Hao L, Li F, Song L, Zhang X, Zhu J, Tian L, Tong X, Cai K, Zhang Z, Ju Y, Yu X, Li Y, Zhou H, Lu H, Qiu X, Li Q, Liao Y, Zhou D, Lian H, Zuo Y, Chen X, Rao W, Ren Y, Wang Y, Zi J, Wang R, Liu N, Wu J, Zhang W, Liu X, Zong Y, Liu W, Xiao L, Hou Y, Xu X, Yang H, Wang J, Kristiansen K, Jia H.	Genomics Proteomics Bioinformatics	10.1016/j.gpb.2021.01.005	2022
Metabolism	Ability of bacterial biphenyl dioxygenases from Burkholderia sp. LB400 and Comamonas testosteroni B-356 to catalyse oxygenation of ortho-hydroxychlorobiphenyls formed from PCBs by plants.	Francova K, Mackova M, Macek T, Sylvestre M.	Environ Pollut	10.1016/s0269-7491(03)00257-4	2004
Metabolism	Novel genomic island modifies DNA with 7-deazaguanine derivatives.	Thiaville JJ, Kellner SM, Yuan Y, Hutinet G, Thiaville PC, Jumpathong W, Mohapatra S, Brochier-Armanet C, Letarov AV, Hillebrand R, Malik CK, Rizzo CJ, Dedon PC, de Crecy-Lagard V.	Proc Natl Acad Sci U S A	10.1073/pnas.1518570113	2016
	A comparative pilot study on Gram-negative bacteria contaminating the hands of children living in urban and rural areas of Indonesia versus Germany - A suitable monitoring strategy for diarrhea risk assessment?	Simanjuntak DF, Kusumawati RL, Bader O, Luder CGK, Zimmermann O, Gross U.	Front Microbiol	10.3389/fmicb.2023.1152411	2023
	Comamonas testosteroni meningitis in a patient with recurrent cholesteatoma.	Arda B, Aydemir S, Yamazhan T, Hassan A, Tunger A, Serter D.	APMIS	10.1034/j.1600-0463.2003.1110404.x	2003
Metabolism	Energization of Comamonas testosteroni ATCC 17454 for indicating toxic effects of chlorophenoxy herbicides.	Loffhagen N, Hartig C, Babel W.	Arch Environ Contam Toxicol	10.1007/s00244-003-2142-6	2003
Metabolism	Loss of Function in Zeaxanthin Epoxidase of Dunaliella tertiolecta Caused by a Single Amino Acid Mutation within the Substrate-Binding Site.	Kim M, Kang J, Kang Y, Kang BS, Jin E.	Mar Drugs	10.3390/md16110418	2018
Metabolism	Architecture and spatial organization in a triple-species bacterial biofilm synergistically degrading the phenylurea herbicide linuron.	Breugelmans P, Barken KB, Tolker-Nielsen T, Hofkens J, Dejonghe W, Springael D.	FEMS Microbiol Ecol	10.1111/j.1574-6941.2008.00470.x	2008
Metabolism	Plasmid-mediated bioaugmentation of activated sludge bacteria in a sequencing batch moving bed reactor using pNB2.	Bathe S, Schwarzenbeck N, Hausner M.	Lett Appl Microbiol	10.1111/j.1472-765x.2005.01754.x	2005
	SeptiFast versus blood culture in clinical routine - A report on 3 years experience.	Korber F, Zeller I, Grunstaudl M, Willinger B, Apfalter P, Hirschl AM, Makristathis A.	Wien Klin Wochenschr	10.1007/s00508-017-1181-3	2017
Phylogeny	Identification of a novel steroid inducible gene associated with the beta hsd locus of Comamonas testosteroni.	Pruneda-Paz JL, Linares M, Cabrera JE, Genti-Raimondi S.	J Steroid Biochem Mol Biol	10.1016/j.jsbmb.2003.10.010	2004
Metabolism	Characterization of phenol biodegradation by Comamonas testosteroni ZD4-1 and Pseudomonas aeruginosa ZD4-3.	Chen YX, Liu H, Chen HL.	Biomed Environ Sci		2003
Metabolism	Optimizing the Management of Cadmium Bioremediation Capacity of Metal-Resistant Pseudomonas sp. Strain Al-Dhabi-126 Isolated from the Industrial City of Saudi Arabian Environment.	Al-Dhabi NA, Esmail GA, Mohammed Ghilan AK, Valan Arasu M.	Int J Environ Res Public Health	10.3390/ijerph16234788	2019
Enzymology	Presumed pseudobacteremia outbreak resulting from contamination of proportional disinfectant dispenser.	Siebor E, Llanes C, Lafon I, Ogier-Desserrey A, Duez JM, Pechinot A, Caillot D, Grandjean M, Sixt N, Neuwirth C.	Eur J Clin Microbiol Infect Dis	10.1007/s10096-007-0260-1	2007
Enzymology	Chaperone-assisted expression, purification, and characterization of recombinant nitrile hydratase NI1 from Comamonas testosteroni.	Stevens JM, Rao Saroja N, Jaouen M, Belghazi M, Schmitter JM, Mansuy D, Artaud I, Sari MA.	Protein Expr Purif	10.1016/s1046-5928(03)00008-1	2003
Metabolism	Regulation of 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase in Comamonas testosteroni: function and relationship of two operators.	Xiong G, Markowetz S, Maser E.	Chem Biol Interact	10.1016/s0009-2797(02)00251-x	2003
	The zoonotic pathogen Wohlfahrtiimonas chitiniclastica - current findings from a clinical and genomic perspective.	Kopf A, Bunk B, Riedel T, Schrottner P.	BMC Microbiol	10.1186/s12866-023-03139-7	2024
Metabolism	The activity of the C4-dicarboxylic acid chemoreceptor of Pseudomonas aeruginosa is controlled by chemoattractants and antagonists.	Martin-Mora D, Ortega A, Perez-Maldonado FJ, Krell T, Matilla MA.	Sci Rep	10.1038/s41598-018-20283-7	2018
Metabolism	[Study on the structure and function of a stable methane-oxidizing mixed microbial consortium].	Luo MF, Wu H, Wang L, Xing XH.	Wei Sheng Wu Xue Bao		2007
Enzymology	Use of chlorate as a selective inhibitor to distinguish membrane-bound nitrate reductase (Nar) and periplasmic nitrate reductase (Nap) of dissimilative nitrate reducing bacteria in sediment.	Rusmana I, Nedwell DB.	FEMS Microbiol Ecol	10.1016/j.femsec.2004.02.010	2004
Metabolism	Characterization and recombinant expression of the translational repressor RepB of 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase in Comamonas testosteroni.	Xiong G, Martin HJ, Maser E.	Chem Biol Interact	10.1016/s0009-2797(02)00252-1	2003
Metabolism	Deuterium isotope effect on enantioselectivity in the Comamonas testosteroni quinohemoprotein alcohol dehydrogenase-catalyzed kinetic resolution of rac-2,2-dimethyl-4-hydroxymethyl-1,3-dioxolane, solketal.	Jongejan A, Jongejan JA, Hagen WR.	Biochim Biophys Acta	10.1016/s1570-9639(03)00073-6	2003
	PQQ glucose dehydrogenase with novel electron transfer ability.	Okuda J, Sode K.	Biochem Biophys Res Commun	10.1016/j.bbrc.2003.12.167	2004
Metabolism	Influence of peanut oil on microbial degradation of polycyclic aromatic hydrocarbons.	Pannu JK, Singh A, Ward OP.	Can J Microbiol	10.1139/w03-068	2003
Metabolism	Medium composition affects the degree and pattern of cadmium inhibition of naphthalene biodegradation.	Hoffman DR, Okon JL, Sandrin TR.	Chemosphere	10.1016/j.chemosphere.2004.11.057	2005
Metabolism	Identification and characterization of a novel translational repressor of the steroid-inducible 3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase gene in Comamonas testosteroni.	Xiong G, Martin HJ, Maser E.	J Biol Chem	10.1074/jbc.m309210200	2003
Metabolism	Characterization of protocatechuate 4,5-dioxygenase induced from p-hydroxybenzoate-cultured Pseudomonas sp. K82.	Yun SH, Yun CY, Kim SI.	J Microbiol		2004
Metabolism	Meta-cleavage enzyme gene tesB is necessary for testosterone degradation in Comamonas testosteroni TA441.	Horinouchi M, Yamamoto T, Taguchi K, Arai H, Kudo T.	Microbiology (Reading)	10.1099/00221287-147-12-3367	2001
Metabolism	Conjugal transfer of plasmid pNB2 to activated sludge bacteria leads to 3-chloroaniline degradation in enrichment cultures.	Bathe S.	Lett Appl Microbiol	10.1111/j.1472-765x.2004.01532.x	2004
	Mechanisms of microbial resistance against cadmium - a review.	Sharma M, Sharma S, Paavan, Gupta M, Goyal S, Talukder D, Akhtar MS, Kumar R, Umar A, Alkhanjaf AAM, Baskoutas S.	J Environ Health Sci Eng	10.1007/s40201-023-00887-6	2024
Genetics	Transcriptome-Guided Insights Into Plastic Degradation by the Marine Bacterium.	Kumari A, Bano N, Bag SK, Chaudhary DR, Jha B.	Front Microbiol	10.3389/fmicb.2021.751571	2021
	Comparative Metagenomics Reveals Microbial Communities and Their Associated Functions in Two Types of Fuzhuan Brick Tea.	Wang X, Du G, Chen H, Zeng X, Liu B, Guo C, Sheng Q, Yuan Y, Yue T.	Front Microbiol	10.3389/fmicb.2021.705681	2021
	Regulation of the physiology and virulence of Ralstonia solanacearum by the second messenger 2',3'-cyclic guanosine monophosphate.	Li X, Yin W, Lin JD, Zhang Y, Guo Q, Wang G, Chen X, Cui B, Wang M, Chen M, Li P, He YW, Qian W, Luo H, Zhang LH, Liu XW, Song S, Deng Y.	Nat Commun	10.1038/s41467-023-43461-2	2023
	Lung Ultrasound in the Evaluation of Lung Disease Severity in Children with Clinically Stable Cystic Fibrosis: A Prospective Cross-Sectional Study.	Jaworska J, Buda N, Kwasniewicz P, Komorowska-Piotrowska A, Sands D.	J Clin Med	10.3390/jcm12093086	2023
	Molecular detection and diversity of medium-chain-length polyhydroxyalkanoates-producing bacteria enriched from activated sludge.	Ciesielski S, Cydzik-Kwiatkowska A, Pokoj T, Klimiuk E.	J Appl Microbiol	10.1111/j.1365-2672.2006.02973.x	2006
Metabolism	Identification of genes and pathways related to phenol degradation in metagenomic libraries from petroleum refinery wastewater.	Silva CC, Hayden H, Sawbridge T, Mele P, De Paula SO, Silva LC, Vidigal PM, Vicentini R, Sousa MP, Torres AP, Santiago VM, Oliveira VM.	PLoS One	10.1371/journal.pone.0061811	2013
Metabolism	Evaluation of effective diffusion coefficient and intrinsic kinetic parameters on azo dye biodegradation using PVA-immobilized cell beads.	Chen KC, Wu JY, Yang WB, Hwang SC.	Biotechnol Bioeng	10.1002/bit.10730	2003
	Multiple detection of both attractants and repellents by the dCache-chemoreceptor SO_1056 of Shewanella oneidensis.	Boyeldieu A, Poli JP, Ali Chaouche A, Fierobe HP, Giudici-Orticoni MT, Mejean V, Jourlin-Castelli C.	FEBS J	10.1111/febs.16548	2022
Enzymology	Crystallization of quinohaemoprotein alcohol dehydrogenase from Comamonas testosteroni: crystals with unique optical properties.	Oubrie A, Huizinga EG, Rozeboom HJ, Kalk KH, de Jong GA, Duine JA, Dijkstra BW.	Acta Crystallogr D Biol Crystallogr	10.1107/s0907444901013002	2001
Metabolism	Identification of the EdcR Estrogen-Dependent Repressor in Caenibius tardaugens NBRC 16725: Construction of a Cellular Estradiol Biosensor.	Ibero J, Galan B, Garcia JL.	Genes (Basel)	10.3390/genes12121846	2021
	Identification of a novel Comamonas testosteroni gene encoding a steroid-inducible extradiol dioxygenase.	Skowasch D, Mobus E, Maser E.	Biochem Biophys Res Commun	10.1016/s0006-291x(02)00516-8	2002
	Dynamical origins of heat capacity changes in enzyme-catalysed reactions.	van der Kamp MW, Prentice EJ, Kraakman KL, Connolly M, Mulholland AJ, Arcus VL.	Nat Commun	10.1038/s41467-018-03597-y	2018
Metabolism	Characterization of hybrid biphenyl dioxygenases obtained by recombining Burkholderia sp. strain LB400 bphA with the homologous gene of Comamonas testosteroni B-356.	Barriault D, Simard C, Chatel H, Sylvestre M.	Can J Microbiol	10.1139/cjm-47-11-1025	2001
	A Soil Inoculant Inhibits Armillaria mellea In Vitro and Improves Productivity of Grapevines with Root Disease.	Baumgartner K, Warnock AE.	Plant Dis	10.1094/pd-90-0439	2006
	Central venous catheter-related infection due to Comamonas testosteroni in a woman with breast cancer.	Le Moal G, Paccalin M, Breux JP, Roblot F, Roblot P, Becq-Giraudon B.	Scand J Infect Dis	10.1080/00365540110026827	2001
Enzymology	Five clinical cases of Necropsobacter rosorum bacteremia.	Tan TY, Ng LS, Eng LC.	J Clin Microbiol	10.1128/jcm.03116-12	2013
	Draft genome of five Cupriavidus plantarum strains: agave, maize and sorghum plant-associated bacteria with resistance to metals.	Arroyo-Herrera I, Rojas-Rojas FU, Lozano-Cervantes KD, Larios-Serrato V, Vasquez-Murrieta MS, Whtiman WB, Ibarra JA, Estrada-de Los Santos P.	3 Biotech	10.1007/s13205-020-02210-8	2020
	Isolation, Identification, and Antimicrobial Susceptibility of Bacteria Associated with Waterpipe Contaminants in Selected Area of Saudi Arabia.	Alaidarous M, Alanazi M, Abdel-Hadi A.	Biomed Res Int	10.1155/2017/8042603	2017
Enzymology	Comamonas testosteroni BR6020 possesses a single genetic locus for extradiol cleavage of protocatechuate.	Providenti MA, Mampel J, MacSween S, Cook AM, Wyndham RC.	Microbiology (Reading)	10.1099/00221287-147-8-2157	2001
Enzymology	Cloning and expression of the gene for periplasmic poly(vinyl alcohol) dehydrogenase from Sphingomonas sp. strain 113P3, a novel-type quinohaemoprotein alcohol dehydrogenase.	Hirota-Mamoto R, Nagai R, Tachibana S, Yasuda M, Tani A, Kimbara K, Kawai F.	Microbiology (Reading)	10.1099/mic.0.28848-0	2006
Enzymology	Folding mechanism of ketosteroid isomerase from Comamonas testosteroni.	Kim DH, Jang DS, Nam GH, Choi KY.	Biochemistry	10.1021/bi0019139	2001
	Endotoxic properties of lipid A from Comamonas testosteroni.	Tanamoto KI, Iida T, Haishima Y, Azumi S.	Microbiology (Reading)	10.1099/00221287-147-5-1087	2001
Enzymology	Regulation of the steroid-inducible 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase gene in Comamonas testosteroni.	Xiong G, Maser E.	J Biol Chem	10.1074/jbc.m010962200	2001
Phylogeny	Dynamics of bacterial and archaeal communities during horse bedding and green waste composting.	Grenier V, Gonzalez E, Brereton NJ, Pitre FE.	PeerJ	10.7717/peerj.15239	2023
Enzymology	The atomic resolution structure of methanol dehydrogenase from Methylobacterium extorquens.	Williams PA, Coates L, Mohammed F, Gill R, Erskine PT, Coker A, Wood SP, Anthony C, Cooper JB.	Acta Crystallogr D Biol Crystallogr	10.1107/s0907444904026964	2005
	The crystal structure of 3alpha -hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni shows a novel oligomerization pattern within the short chain dehydrogenase/reductase family.	Grimm C, Maser E, Mobus E, Klebe G, Reuter K, Ficner R.	J Biol Chem	10.1074/jbc.m007559200	2000
Enzymology	Structure of bacterial 3beta/17beta-hydroxysteroid dehydrogenase at 1.2 A resolution: a model for multiple steroid recognition.	Benach J, Filling C, Oppermann UC, Roversi P, Bricogne G, Berndt KD, Jornvall H, Ladenstein R.	Biochemistry	10.1021/bi0203684	2002
Enzymology	Crystal structure of quinohemoprotein alcohol dehydrogenase from Comamonas testosteroni: structural basis for substrate oxidation and electron transfer.	Oubrie A, Rozeboom HJ, Kalk KH, Huizinga EG, Dijkstra BW.	J Biol Chem	10.1074/jbc.m109403200	2002
Pathogenicity	Steroid-inducible transcription of the 3beta/17beta-hydroxysteroid dehydrogenase gene (3beta/17beta-hsd) in Comamonas testosteroni.	Cabrera JE, Pruneda Paz JL, Genti-Raimondi S.	J Steroid Biochem Mol Biol	10.1016/s0960-0760(00)00066-2	2000
Enzymology	A model on the regulation of 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase expression in Comamonas testosteroni.	Xiong G, Martin H, Blum A, Schafers C, Maser E.	Chem Biol Interact	10.1016/s0009-2797(00)00303-3	2001
	Isolation and characterization of an estrogen-degrading Pseudomonas putida strain SJTE-1.	Wang P, Zheng D, Liang R.	3 Biotech	10.1007/s13205-018-1537-z	2019
Transcriptome	The complete genome of Comamonas testosteroni reveals its genetic adaptations to changing environments.	Ma YF, Zhang Y, Zhang JY, Chen DW, Zhu Y, Zheng H, Wang SY, Jiang CY, Zhao GP, Liu SJ.	Appl Environ Microbiol	10.1128/aem.00933-09	2009
Enzymology	Origin of the different pH activity profile in two homologous ketosteroid isomerases.	Yun YS, Lee TH, Nam GH, Jang DS, Shin S, Oh BH, Choi KY.	J Biol Chem	10.1074/jbc.m302166200	2003
	Sequence-Specific Capture of Oligonucleotide Probes (SCOPE): a Simple and Rapid Microbial rRNA Quantification Method Using a Molecular Weight Cutoff Membrane.	Takemura Y, Sekiguchi Y, Syutsubo K, Harada H, Omura T, Li YY, Kubota K.	Appl Environ Microbiol	10.1128/aem.01167-21	2021
	Kemp Eliminase Activity of Ketosteroid Isomerase.	Lamba V, Sanchez E, Fanning LR, Howe K, Alvarez MA, Herschlag D, Forconi M.	Biochemistry	10.1021/acs.biochem.6b00762	2017
	Bacterial diversity in aortic aneurysms determined by 16S ribosomal RNA gene analysis.	Marques da Silva R, Caugant DA, Eribe ER, Aas JA, Lingaas PS, Geiran O, Tronstad L, Olsen I.	J Vasc Surg	10.1016/j.jvs.2006.07.021	2006
	Characterization of Binary Biofilms of Listeria monocytogenes and Lactobacillus and Their Response to Chlorine Treatment.	Olszewska MA, Diez-Gonzalez F.	Front Microbiol	10.3389/fmicb.2021.638933	2021
Metabolism	3alpha-Hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni: biological significance, three-dimensional structure and gene regulation.	Maser E, Xiong G, Grimm C, Ficner R, Reuter K.	Chem Biol Interact	10.1016/s0009-2797(00)00302-1	2001
Phylogeny	Composition of gut and oropharynx bacterial communities in Rattus norvegicus and Suncus murinus in China.	He WQ, Xiong YQ, Ge J, Chen YX, Chen XJ, Zhong XS, Ou ZJ, Gao YH, Cheng MJ, Mo Y, Wen YQ, Qiu M, Huo ST, Chen SW, Zheng XY, He H, Li YZ, You FF, Zhang MY, Chen Q.	BMC Vet Res	10.1186/s12917-020-02619-6	2020
Metabolism	The diversity of bacteria isolated from antarctic freshwater reservoirs possessing the ability to produce polyhydroxyalkanoates.	Ciesielski S, Gorniak D, Mozejko J, Swiatecki A, Grzesiak J, Zdanowski M.	Curr Microbiol	10.1007/s00284-014-0629-1	2014
Metabolism	Effects of pH amendment on metal working fluid wastewater biological treatment using a defined bacterial consortium.	van der Gast CJ, Thompson IP.	Biotechnol Bioeng	10.1002/bit.20351	2005
Enzymology	Equilibrium and kinetic analysis of folding of ketosteroid isomerase from Comamonas testosteroni.	Kim DH, Jang DS, Nam GH, Yun S, Cho JH, Choi G, Lee HC, Choi KY.	Biochemistry	10.1021/bi000872d	2000
Enzymology	Functional expression, purification, and characterization of 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni.	Maser E, Mobus E, Xiong G.	Biochem Biophys Res Commun	10.1006/bbrc.2000.2813	2000
Enzymology	The catalytic roles of P185 and T188 and substrate-binding loop flexibility in 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni.	Hwang CC, Chang YH, Lee HJ, Wang TP, Su YM, Chen HW, Liang PH.	PLoS One	10.1371/journal.pone.0063594	2013
Phylogeny	Qualitative microbiome profiling along a wastewater system in Kampala, Uganda.	Schneeberger PHH, Fuhrimann S, Becker SL, Pothier JF, Duffy B, Beuret C, Frey JE, Utzinger J.	Sci Rep	10.1038/s41598-019-53569-5	2019
	Detection of microbial cell-free DNA in maternal and umbilical cord plasma in patients with chorioamnionitis using next generation sequencing.	Witt RG, Blair L, Frascoli M, Rosen MJ, Nguyen QH, Bercovici S, Zompi S, Romero R, Mackenzie TC.	PLoS One	10.1371/journal.pone.0231239	2020
	Synthesis, Properties, and Biodegradability of Thermoplastic Elastomers Made from 2-Methyl-1,3-propanediol, Glutaric Acid and Lactide.	Zahir L, Kida T, Tanaka R, Nakayama Y, Shiono T, Kawasaki N, Yamano N, Nakayama A.	Life (Basel)	10.3390/life11010043	2021
Enzymology	Host plants influence the composition of the gut bacteria in Henosepilachna vigintioctopunctata.	Lu J, Guo W, Chen S, Guo M, Qiu B, Yang C, Lian T, Pan H.	PLoS One	10.1371/journal.pone.0224213	2019
Metabolism	Bioconversion of pyrimidine by resting cells of quinoline-degrading bacteria.	Fetzner S.	FEMS Microbiol Lett	10.1111/j.1574-6968.1999.tb13675.x	1999
Enzymology	Acute infective endocarditis caused by Delftia acidovorans, a rare pathogen complicating intravenous drug use.	Mahmood S, Taylor KE, Overman TL, McCormick MI.	J Clin Microbiol	10.1128/jcm.00553-12	2012
Enzymology	Molecular cloning and structural analysis of quinohemoprotein alcohol dehydrogenase ADH-IIG from Pseudomonas putida HK5.	Toyama H, Chen ZW, Fukumoto M, Adachi O, Matsushita K, Mathews FS.	J Mol Biol	10.1016/j.jmb.2005.06.078	2005
Enzymology	Diversity and functional prediction of microbial communities involved in the first aerobic bioreactor of coking wastewater treatment system.	Deng J, Zhang B, Xie J, Wu H, Li Z, Qiu G, Wei C, Zhu S.	PLoS One	10.1371/journal.pone.0243748	2020
	Biosensor and chemo-enzymatic one-pot cascade applications to detect and transform PET-derived terephthalic acid in living cells.	Bayer T, Pfaff L, Branson Y, Becker A, Wu S, Bornscheuer UT, Wei R.	iScience	10.1016/j.isci.2022.104326	2022
	Coordinated regulation of chemotaxis and resistance to copper by CsoR in Pseudomonas putida.	He M, Tao Y, Mu K, Feng H, Fan Y, Liu T, Huang Q, Xiao Y, Chen W.	Elife	10.7554/elife.100914	2025
Metabolism	The oxidative fermentation of ethanol in Gluconacetobacter diazotrophicus is a two-step pathway catalyzed by a single enzyme: alcohol-aldehyde Dehydrogenase (ADHa).	Gomez-Manzo S, Escamilla JE, Gonzalez-Valdez A, Lopez-Velazquez G, Vanoye-Carlo A, Marcial-Quino J, de la Mora-de la Mora I, Garcia-Torres I, Enriquez-Flores S, Contreras-Zentella ML, Arreguin-Espinosa R, Kroneck PM, Sosa-Torres ME.	Int J Mol Sci	10.3390/ijms16011293	2015
	Leveraging a Structural Blueprint to Rationally Engineer the Rieske Oxygenase TsaM.	Tian J, Garcia AA, Donnan PH, Bridwell-Rabb J.	Biochemistry	10.1021/acs.biochem.3c00150	2023
	Bacterial Diversity in Submarine Groundwater along the Coasts of the Yellow Sea.	Ye Q, Liu J, Du J, Zhang J.	Front Microbiol	10.3389/fmicb.2015.01519	2015
Metabolism	Investigations on the Degradation of the Bile Salt Cholate via the 9,10-Seco-Pathway Reveals the Formation of a Novel Recalcitrant Steroid Compound by a Side Reaction in Sphingobium sp. Strain Chol11.	Feller FM, Eilebrecht S, Nedielkov R, Yucel O, Alvincz J, Salinas G, Ludwig KC, Moller H, Philipp B.	Microorganisms	10.3390/microorganisms9102146	2021
	Impact of dissolved oxygen and loading rate on NH₃ oxidation and N₂ production mechanisms in activated sludge treatment of sewage.	Zhang X, Li S, Zheng S, Duan S.	Microb Biotechnol	10.1111/1751-7915.13599	2021
Enzymology	The quinohaemoprotein lupanine hydroxylase from Pseudomonas putida.	Hopper DJ, Kaderbhai MA.	Biochim Biophys Acta	10.1016/s1570-9639(03)00070-0	2003
	Microbial community in microbial fuel cell (MFC) medium and effluent enriched with purple photosynthetic bacterium (Rhodopseudomonas sp.).	Park TJ, Ding W, Cheng S, Brar MS, Ma AP, Tun HM, Leung FC.	AMB Express	10.1186/s13568-014-0022-2	2014
Enzymology	Post-translational modification of Rhodococcus R312 and Comamonas NI1 nitrile hydratases.	Stevens JM, Belghazi M, Jaouen M, Bonnet D, Schmitter JM, Mansuy D, Sari MA, Artaud I.	J Mass Spectrom	10.1002/jms.509	2003
Metabolism	Characterization of an acetate-degrading sludge without intracellular accumulation of polyphosphate and glycogen.	Fang HH, Zhang T, Liu Y.	Water Res	10.1016/s0043-1354(02)00027-1	2002
Metabolism	McpT, a Broad-Range Carboxylate Chemoreceptor in Sinorhizobium meliloti.	Baaziz H, Compton KK, Hildreth SB, Helm RF, Scharf BE.	J Bacteriol	10.1128/jb.00216-21	2021
	Bacterial Microbiota-derived Extracellular Vesicles in Children With Allergic Airway Diseases: Compositional and Functional Features.	Samra MS, Lim DH, Han MY, Jee HM, Kim YK, Kim JH.	Allergy Asthma Immunol Res	10.4168/aair.2021.13.1.56	2021
Enzymology	Superiority of molecular techniques for identification of gram-negative, oxidase-positive rods, including morphologically nontypical Pseudomonas aeruginosa, from patients with cystic fibrosis.	Wellinghausen N, Kothe J, Wirths B, Sigge A, Poppert S.	J Clin Microbiol	10.1128/jcm.43.8.4070-4075.2005	2005
Metabolism	Biphenyl-associated meta-cleavage dioxygenases from Comamonas testosteroni B-356.	Hein P, Powlowski J, Barriault D, Hurtubise Y, Ahmad D, Sylvestre M.	Can J Microbiol	10.1139/cjm-44-1-42	1998
Metabolism	The ethanol oxidation system and its regulation in Pseudomonas aeruginosa.	Gorisch H.	Biochim Biophys Acta	10.1016/s1570-9639(03)00066-9	2003
	Molecular cloning, overexpression, and characterization of steroid-inducible 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni. A novel member of the short-chain dehydrogenase/reductase superfamily.	Mobus E, Maser E.	J Biol Chem	10.1074/jbc.273.47.30888	1998
Metabolism	Genetics of naphthalene and phenanthrene degradation by Comamonas testosteroni.	Goyal AK, Zylstra GJ.	J Ind Microbiol Biotechnol	10.1038/sj.jim.2900476	1997
	N-sulfotestosteronan, a novel substrate for heparan sulfate 6-O-sulfotransferases and its analysis by oxidative degradation.	Li G, Masuko S, Green DE, Xu Y, Li L, Zhang F, Xue C, Liu J, DeAngelis PL, Linhardt RJ.	Biopolymers	10.1002/bip.22263	2013
Enzymology	Homology model of the quinohaemoprotein alcohol dehydrogenase from Comamonas testosteroni.	Jongejan A, Jongejan JA, Duine JA.	Protein Eng	10.1093/protein/11.3.185	1998
Enzymology	A new Comamonas testosteroni steroid-inducible gene: cloning and sequence analysis.	Cabrera JE, Panzetta-Dutari G, Pruneda JL, Genti-Raimondi S.	J Steroid Biochem Mol Biol	10.1016/s0960-0760(97)00078-2	1997
	Genomics and metatranscriptomics of biogeochemical cycling and degradation of lignin-derived aromatic compounds in thermal swamp sediment.	Levy-Booth DJ, Hashimi A, Roccor R, Liu LY, Renneckar S, Eltis LD, Mohn WW.	ISME J	10.1038/s41396-020-00820-x	2021
Enzymology	Cloning of the gene for poly(3-hydroxybutyric acid) depolymerase of Comamonas testosteroni and functional analysis of its substrate-binding domain.	Shinomiya M, Iwata T, Kasuya K, Doi Y.	FEMS Microbiol Lett	10.1111/j.1574-6968.1997.tb12628.x	1997
Enzymology	Prevalence and Identification of Burkholderia pseudomallei and Near-Neighbor Species in the Malabar Coastal Region of India.	Peddayelachagiri BV, Paul S, Nagaraj S, Gogoi M, Sripathy MH, Batra HV.	PLoS Negl Trop Dis	10.1371/journal.pntd.0004956	2016
	Further Studies on the 3-Ketosteroid 9alpha-Hydroxylase of Rhodococcus ruber Chol-4, a Rieske Oxygenase of the Steroid Degradation Pathway.	Baldanta S, Navarro Llorens JM, Guevara G.	Microorganisms	10.3390/microorganisms9061171	2021
	Proton affinity of the oxyanion hole in the active site of ketosteroid isomerase.	Childs W, Boxer SG.	Biochemistry	10.1021/bi100074s	2010
Phylogeny	Sequencing of Comamonas testosteroni strain B-356-biphenyl/chlorobiphenyl dioxygenase genes: evolutionary relationships among Gram-negative bacterial biphenyl dioxygenases.	Sylvestre M, Sirois M, Hurtubise Y, Bergeron J, Ahmad D, Shareck F, Barriault D, Guillemette I, Juteau JM.	Gene	10.1016/0378-1119(96)00039-x	1996
	Effect of the oil from the fatty tissues of Crocodylus siamensis on gut microbiome diversity and metabolism in mice.	Parunyakul K, Chuchoiy A, Kooltueon S, Puttagamnerd P, Srisuksai K, Santativongchai P, Pongchairerk U, Tulayakul P, E-Kobon T, Fungfuang W.	PLoS One	10.1371/journal.pone.0289073	2023
	Assessment of the Suitability of Melilotus officinalis for Phytoremediation of Soil Contaminated with Petroleum Hydrocarbons (TPH and PAH), Zn, Pb and Cd Based on Toxicological Tests.	Steliga T, Kluk D.	Toxics	10.3390/toxics9070148	2021
Metabolism	Use of anion-aromatic interactions to position the general base in the ketosteroid isomerase active site.	Schwans JP, Sunden F, Lassila JK, Gonzalez A, Tsai Y, Herschlag D.	Proc Natl Acad Sci U S A	10.1073/pnas.1206710110	2013
Enzymology	Acidovorax oryzae catheter-associated bloodstream infection.	Orsborne C, Hardy A, Isalska B, Williams SG, Muldoon EG.	J Clin Microbiol	10.1128/jcm.00657-14	2014
Phylogeny	High-Throughput Sequencing and Metabolomics Reveal Differences in Bacterial Diversity and Metabolites Between Red and White Sufu.	Tan G, Hu M, Li X, Pan Z, Li M, Li L, Yang M.	Front Microbiol	10.3389/fmicb.2020.00758	2020
	The modular pYT vector series employed for chromosomal gene integration and expression to produce carbazoles and glycolipids in P. putida.	Weihmann R, Kubicki S, Bitzenhofer NL, Domrose A, Bator I, Kirschen LM, Kofler F, Funk A, Tiso T, Blank LM, Jaeger KE, Drepper T, Thies S, Loeschcke A.	FEMS Microbes	10.1093/femsmc/xtac030	2023
Metabolism	Biodegradation of the mixtures of 4-chlorophenol and phenol by Comamonas testosteroni CPW301.	Bae HS, Lee JM, Kim YB, Lee ST.	Biodegradation	10.1007/bf00115293	1996
Pathogenicity	Microbiological and Toxicological Hazards in Sewage Treatment Plant Bioaerosol and Dust.	Szulc J, Okrasa M, Majchrzycka K, Sulyok M, Nowak A, Ruman T, Niziol J, Szponar B, Gutarowska B.	Toxins (Basel)	10.3390/toxins13100691	2021
Metabolism	Identification of 9,17-dioxo-1,2,3,4,10,19-hexanorandrostan-5-oic acid, 4-hydroxy-2-oxohexanoic acid, and 2-hydroxyhexa-2,4-dienoic acid and related enzymes involved in testosterone degradation in Comamonas testosteroni TA441.	Horinouchi M, Hayashi T, Koshino H, Kurita T, Kudo T.	Appl Environ Microbiol	10.1128/aem.71.9.5275-5281.2005	2005
Enzymology	Bacteremia caused by Comamonas kerstersii in a patient with diverticulosis.	Opota O, Ney B, Zanetti G, Jaton K, Greub G, Prod'hom G.	J Clin Microbiol	10.1128/jcm.02942-13	2014
Metabolism	Functional Redundancy of Linuron Degradation in Microbial Communities in Agricultural Soil and Biopurification Systems.	Horemans B, Bers K, Ruiz Romero E, Pose Juan E, Dunon V, De Mot R, Springael D.	Appl Environ Microbiol	10.1128/aem.04018-15	2016
Metabolism	Isolation and characterization of two aerobic bacterial strains that completely degrade ethyl tert-butyl ether (ETBE).	Kharoune M, Kharoune L, Lebeault JM, Pauss A.	Appl Microbiol Biotechnol	10.1007/s002530000528	2001
Metabolism	Biodegradation of 17beta-estradiol by Bacterial Co-culture Isolated from Manure.	Li M, Zhao X, Zhang X, Wu D, Leng S.	Sci Rep	10.1038/s41598-018-22169-0	2018
Enzymology	15N NMR relaxation studies of backbone dynamics in free and steroid-bound Delta 5-3-ketosteroid isomerase from Pseudomonas testosteroni.	Yun S, Jang DS, Kim DH, Choi KY, Lee HC.	Biochemistry	10.1021/bi0023192	2001
Enzymology	Crystallization and crystal packing of recombinant 3 (or 17) beta-hydroxysteroid dehydrogenase from Comamonas testosteroni ATTC 11996.	Benach J, Knapp S, Oppermann UC, Hagglund O, Jornvall H, Ladenstein R.	Eur J Biochem	10.1111/j.1432-1033.1996.t01-1-00144.x	1996
	Characterization of active recombinant his-tagged oxygenase component of Comamonas testosteroni B-356 biphenyl dioxygenase.	Hurtubise Y, Barriault D, Sylvestre M.	J Biol Chem	10.1074/jbc.271.14.8152	1996
	Chemical structure of lipid A isolated from Comamonas testosteroni lipopolysaccharide.	Iida T, Haishima Y, Tanaka A, Nishiyama K, Saito S, Tanamoto K.	Eur J Biochem	10.1111/j.1432-1033.1996.0468k.x	1996
Metabolism	Microbial degradation of nitrobenzene and mono-nitrophenol by bacteria enriched from municipal activated sludge.	Zhao JS, Ward OP.	Can J Microbiol	10.1139/cjm-45-5-427	1999
Metabolism	A novel testosterone catabolic pathway in bacteria.	Leu YL, Wang PH, Shiao MS, Ismail W, Chiang YR.	J Bacteriol	10.1128/jb.00331-11	2011
Enzymology	A ColE1-compatible expression vector for the production of His-tagged fusion proteins.	Barriault D, Sylvestre M.	Antonie Van Leeuwenhoek	10.1023/a:1002070630330	1999
Metabolism	Molybdopterin radical in bacterial aldehyde dehydrogenases.	Luykx DM, Duine JA, de Vries S.	Biochemistry	10.1021/bi972972y	1998
Metabolism	Degradative pathways for p-toluenecarboxylate and p-toluenesulfonate and their multicomponent oxygenases in Comamonas testosteroni strains PSB-4 and T-2.	Junker F, Saller E, Schlafli Oppenberg HR, Kroneck PM, Leisinger T, Cook AM.	Microbiology (Reading)	10.1099/00221287-142-9-2419	1996
Metabolism	An inducible 1-butanol dehydrogenase, a quinohaemoprotein, is involved in the oxidation of butane by "Pseudomonas butanovora".	Vangnai AS, Arp DJ.	Microbiology (Reading)	10.1099/00221287-147-3-745	2001
Metabolism	Sequence of the bphD gene encoding 2-hydroxy-6-oxo-(phenyl/chlorophenyl)hexa-2,4-dienoic acid (HOP/cPDA) hydrolase involved in the biphenyl/polychlorinated biphenyl degradation pathway in Comamonas testosteroni: evidence suggesting involvement of Ser112 in catalytic activity.	Ahmad D, Fraser J, Sylvestre M, Larose A, Khan A, Bergeron J, Juteau JM, Sondossi M.	Gene	10.1016/0378-1119(95)00073-f	1995
	Toxicity of hydroxylated polychlorinated biphenyls (HO-PCBs) using the bioluminescent assay Microtox(®).	Bhalla R, Tehrani R, Van Aken B.	Ecotoxicology	10.1007/s10646-016-1693-z	2016
	Aliphatic nitrilase from a soil-isolated Comamonas testosteroni sp.: gene cloning and overexpression, purification and primary structure.	Levy-Schil S, Soubrier F, Crutz-Le Coq AM, Faucher D, Crouzet J, Petre D.	Gene	10.1016/0378-1119(95)00242-x	1995
Enzymology	Characterization of the gene encoding quinohaemoprotein ethanol dehydrogenase of Comamonas testosteroni.	Stoorvogel J, Kraayveld DE, Van Sluis CA, Jongejan JA, De Vries S, Duine JA.	Eur J Biochem	10.1111/j.1432-1033.1996.00690.x	1996
Enzymology	Characterization of fungal 17beta-hydroxysteroid dehydrogenases.	Rizner TL, Zakelj-Mavric M.	Comp Biochem Physiol B Biochem Mol Biol	10.1016/s0305-0491(00)00234-0	2000
Metabolism	Insights into the catalytic mechanism and active-site environment of Comamonas testosteroni delta 5-3-ketosteroid isomerase as revealed by site-directed mutagenesis of the catalytic base aspartate-38.	Holman CM, Benisek WF.	Biochemistry	10.1021/bi00043a032	1995
Metabolism	Quinoline 2-oxidoreductase and 2-oxo-1,2-dihydroquinoline 5,6-dioxygenase from Comamonas testosteroni 63. The first two enzymes in quinoline and 3-methylquinoline degradation.	Schach S, Tshisuaka B, Fetzner S, Lingens F.	Eur J Biochem	10.1111/j.1432-1033.1995.tb20841.x	1995
	Detection of HIV-1 p24 at Attomole Level by Ultrasensitive ELISA with Thio-NAD Cycling.	Nakatsuma A, Kaneda M, Kodama H, Morikawa M, Watabe S, Nakaishi K, Yamashita M, Yoshimura T, Miura T, Ninomiya M, Ito E.	PLoS One	10.1371/journal.pone.0131319	2015
Enzymology	Mechanistic insights from the three-dimensional structure of 3-oxo-Delta(5)-steroid isomerase.	Pollack RM, Thornburg LD, Wu ZR, Summers MF.	Arch Biochem Biophys	10.1006/abbi.1999.1384	1999
	Recent Strategies for Bioremediation of Emerging Pollutants: A Review for a Green and Sustainable Environment.	Bala S, Garg D, Thirumalesh BV, Sharma M, Sridhar K, Inbaraj BS, Tripathi M.	Toxics	10.3390/toxics10080484	2022
Enzymology	Recurrent Microvirgula aerodenitrificans bacteremia.	Murphy ME, Goodson A, Malnick H, Shah J, Neelamkavil R, Devi R.	J Clin Microbiol	10.1128/jcm.00392-12	2012
Biotechnology	A Novel Actinobacterial Cutinase Containing a Noncatalytic Polymer-Binding Domain.	Abokitse K, Grosse S, Leisch H, Corbeil CR, Perrin-Sarazin F, Lau PCK.	Appl Environ Microbiol	10.1128/aem.01522-21	2022
Enzymology	A study on the prevalence of gram-negative bacteria in bulk tank milk.	Jayarao BM, Wang L.	J Dairy Sci	10.3168/jds.s0022-0302(99)75518-9	1999
Metabolism	Characterization by arbitrary primer polymerase chain reaction of polychlorinated biphenyl (PCB)-degrading strains of Comamonas testosteroni isolated from PCB-contaminated soil.	Joshi B, Walia S.	Can J Microbiol	10.1139/m95-081	1995
Enzymology	Quinohaemoprotein ethanol dehydrogenase from Comamonas testosteroni. Purification, characterization, and reconstitution of the apoenzyme with pyrroloquinoline quinone analogues.	de Jong GA, Geerlof A, Stoorvogel J, Jongejan JA, de Vries S, Duine JA.	Eur J Biochem	10.1111/j.1432-1033.1995.tb20634.x	1995
Pathogenicity	Acquisition and Spread of Antimicrobial Resistance: A tet(X) Case Study.	Aminov R.	Int J Mol Sci	10.3390/ijms22083905	2021
	Microbial Community and Function-Based Synthetic Bioinoculants: A Perspective for Sustainable Agriculture.	Suman A, Govindasamy V, Ramakrishnan B, Aswini K, SaiPrasad J, Sharma P, Pathak D, Annapurna K.	Front Microbiol	10.3389/fmicb.2021.805498	2021
	Regulation of the degradative pathways from 4-toluenesulphonate and 4-toluenecarboxylate to protocatechuate in Comamonas testosteroni T-2.	Schlfli Oppenberg HR, Chen G, Leisinger T, Cook AM.	Microbiology (Reading)	10.1099/13500872-141-8-1891	1995
Metabolism	Characterization of the interaction between PQQ and heme c in the quinohemoprotein ethanol dehydrogenase from Comamonas testosteroni.	de Jong GA, Caldeira J, Sun J, Jongejan JA, de Vries S, Loehr TM, Moura I, Moura JJ, Duine JA.	Biochemistry	10.1021/bi00029a021	1995
	Influence of Intratumor Microbiome on Clinical Outcome and Immune Processes in Prostate Cancer.	Ma J, Gnanasekar A, Lee A, Li WT, Haas M, Wang-Rodriguez J, Chang EY, Rajasekaran M, Ongkeko WM.	Cancers (Basel)	10.3390/cancers12092524	2020
Metabolism	Analysis of the differential gene and protein expression profile of the rolled leaf mutant of transgenic rice (Oryza sativa L.).	Zhu Q, Yu S, Chen G, Ke L, Pan D.	PLoS One	10.1371/journal.pone.0181378	2017
Metabolism	Description of the kinetic mechanism and the enantioselectivity of quinohaemoprotein ethanol dehydrogenase from Comamonas testosteroni in the oxidation of alcohols and aldehydes.	Geerlof A, Rakels JJ, Straathof AJ, Heijnen JJ, Jongejan JA, Duine JA.	Eur J Biochem	10.1111/j.1432-1033.1994.tb20078.x	1994
Metabolism	Steady-state kinetic characterization and crystallization of a polychlorinated biphenyl-transforming dioxygenase.	Imbeault NY, Powlowski JB, Colbert CL, Bolin JT, Eltis LD.	J Biol Chem	10.1074/jbc.275.17.12430	2000
Metabolism	Microbial metabolism of quinoline and related compounds. XVII. Degradation of 3-methylquinoline by Comamonas testosteroni 63.	Schach S, Schwarz G, Fetzner S, Lingens F.	Biol Chem Hoppe Seyler	10.1515/bchm3.1993.374.1-6.175	1993
	Extension of an Atom-Atom Dispersion Function to Halogen Bonds and Its Use for Rational Design of Drugs and Biocatalysts.	Jedwabny W, Dyguda-Kazimierowicz E, Pernal K, Szalewicz K, Patkowski K.	J Phys Chem A	10.1021/acs.jpca.0c11347	2021
Enzymology	Crystal structure of delta(5)-3-ketosteroid isomerase from Pseudomonas testosteroni in complex with equilenin settles the correct hydrogen bonding scheme for transition state stabilization.	Cho HS, Ha NC, Choi G, Kim HJ, Lee D, Oh KS, Kim KS, Lee W, Choi KY, Oh BH.	J Biol Chem	10.1074/jbc.274.46.32863	1999
	Endotoxins and IgG antibodies as indicators of occupational exposure to the microbial contaminants of metal-working fluids.	Laitinen S, Linnainmaa M, Laitinen J, Kiviranta H, Reiman M, Liesivuori J.	Int Arch Occup Environ Health	10.1007/s004200050397	1999
Enzymology	The adsorption of substrate-binding domain of PHB depolymerases to the surface of poly(3-hydroxybutyric acid).	Shinomiya M, Iwata T, Doi Y.	Int J Biol Macromol	10.1016/s0141-8130(98)00007-5	1998
Enzymology	In situ detection of bacteria in continuous-flow cultures of seawater sediment suspensions with fluorescently labelled rRNA-directed oligonucleotide probes.	Bruns A, Berthe-Corti L.	Microbiology (Reading)	10.1099/00221287-144-10-2783	1998
Metabolism	Role of Serine140 in the mode of action of Mycobacterium tuberculosis beta-ketoacyl-ACP Reductase (MabA).	Rosado LA, Caceres RA, de Azevedo WF, Basso LA, Santos DS.	BMC Res Notes	10.1186/1756-0500-5-526	2012
Enzymology	Ability of the MicroScan rapid gram-negative ID type 3 panel to identify nonenteric glucose-fermenting and nonfermenting gram-negative bacilli.	O'Hara CM, Miller JM.	J Clin Microbiol	10.1128/jcm.40.10.3750-3752.2002	2002
	Populations of pseudomonads and related bacteria associated with bottled non-carbonated mineral water	Jayasekara NY, Heard GM, Cox JM, Fleet GH.	Food Microbiol	10.1006/fmic.1997.0146	1998
Metabolism	Identification and mapping of the gene translation products involved in the first steps of the Comamonas testosteroni B-356 biphenyl/chlorobiphenyl biodegradation pathway.	Bergeron J, Ahmad D, Barriault D, Larose A, Sylvestre M, Powlowski J.	Can J Microbiol	10.1139/m94-118	1994
Metabolism	Function of a glutamine synthetase-like protein in bacterial aniline oxidation via gamma-glutamylanilide.	Takeo M, Ohara A, Sakae S, Okamoto Y, Kitamura C, Kato D, Negoro S.	J Bacteriol	10.1128/jb.00397-13	2013
Metabolism	Microbial iron redox cycling in a circumneutral-pH groundwater seep.	Blothe M, Roden EE.	Appl Environ Microbiol	10.1128/aem.01817-08	2009
	Custom tuning of Rieske oxygenase reactivity.	Tian J, Liu J, Knapp M, Donnan PH, Boggs DG, Bridwell-Rabb J.	Nat Commun	10.1038/s41467-023-41428-x	2023
Metabolism	Escherichia coli FabG 3-ketoacyl-ACP reductase proteins lacking the assigned catalytic triad residues are active enzymes.	Hu Z, Ma J, Chen Y, Tong W, Zhu L, Wang H, Cronan JE.	J Biol Chem	10.1016/j.jbc.2021.100365	2021
Metabolism	Different inocula produce distinctive microbial consortia with similar lignocellulose degradation capacity.	Cortes-Tolalpa L, Jimenez DJ, de Lima Brossi MJ, Salles JF, van Elsas JD.	Appl Microbiol Biotechnol	10.1007/s00253-016-7516-6	2016
Enzymology	Ultrasensitive enzyme-linked immunosorbent assay (ELISA) of proteins by combination with the thio-NAD cycling method.	Watabe S, Kodama H, Kaneda M, Morikawa M, Nakaishi K, Yoshimura T, Iwai A, Miura T, Ito E.	Biophysics (Nagoya-shi)	10.2142/biophysics.10.49	2014
	Biodegradation of 4-chlorophenol in an airlift inner loop bioreactor with mixed consortium: effect of HRT, loading rate and biogenic substrate.	Patel BP, Kumar A.	3 Biotech	10.1007/s13205-016-0435-5	2016
Metabolism	Prediction and Analysis in silico of Genomic Islands in Aeromonas hydrophila.	da Silva Filho AC, Marchaukoski JN, Raittz RT, De Pierri CR, de Jesus Soares Machado D, Fadel-Picheth CMT, Picheth G.	Front Microbiol	10.3389/fmicb.2021.769380	2021
Enzymology	Substrate and binding specificities of bacterial polyhydroxybutyrate depolymerases.	Kasuya K, Ohura T, Masuda K, Doi Y.	Int J Biol Macromol	10.1016/s0141-8130(99)00046-x	1999
Enzymology	Recurrent intravascular-catheter-related bacteremia caused by Delftia acidovorans in a hemodialysis patient.	Chotikanatis K, Backer M, Rosas-Garcia G, Hammerschlag MR.	J Clin Microbiol	10.1128/jcm.00625-11	2011
Enzymology	Comamonas testosteronan synthase, a bifunctional glycosyltransferase that produces a unique heparosan polysaccharide analog.	Otto NJ, Solakyildirim K, Linhardt RJ, DeAngelis PL.	Glycobiology	10.1093/glycob/cwr072	2011
Enzymology	Characteristics of the GlnH and GlnX Signal Transduction Proteins Controlling PknG-Mediated Phosphorylation of OdhI and 2-Oxoglutarate Dehydrogenase Activity in Corynebacterium glutamicum.	Sundermeyer L, Bosco G, Gujar S, Brocker M, Baumgart M, Willbold D, Weiergraber OH, Bellinzoni M, Bott M.	Microbiol Spectr	10.1128/spectrum.02677-22	2022
Enzymology	Expression, purification, crystallization and preliminary X-ray analysis of para-nitrophenol 4-monooxygenase from Pseudomonas putida DLL-E4.	Liu W, Shen W, Zhao X, Cao H, Cui Z.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309109032370	2009
Metabolism	Functional Characterization of Three Specific Acyl-Coenzyme A Synthetases Involved in Anaerobic Cholesterol Degradation in Sterolibacterium denitrificans Chol1S.	Warnke M, Jung T, Jacoby C, Agne M, Feller FM, Philipp B, Seiche W, Breit B, Boll M.	Appl Environ Microbiol	10.1128/aem.02721-17	2018
Metabolism	Ground state destabilization from a positioned general base in the ketosteroid isomerase active site.	Ruben EA, Schwans JP, Sonnett M, Natarajan A, Gonzalez A, Tsai Y, Herschlag D.	Biochemistry	10.1021/bi301348x	2013
	Microbial diversity and metaproteomic analysis of activated sludge responses to naphthalene and anthracene exposure.	Li S, Hu S, Shi S, Ren L, Yan W, Zhao H.	RSC Adv	10.1039/c9ra04674g	2019
Metabolism	From sequence to function: a new workflow for nitrilase identification.	Egelkamp R, Friedrich I, Hertel R, Daniel R.	Appl Microbiol Biotechnol	10.1007/s00253-020-10544-9	2020
	Identification of a Small Molecule Activator for AphB, a LysR-Type Virulence Transcriptional Regulator in Vibrio cholerae.	Privett BR, Pellegrini M, Kovacikova G, Taylor RK, Skorupski K, Mierke D, Kull FJ.	Biochemistry	10.1021/acs.biochem.7b00337	2017
Metabolism	Structure-guided design of Serratia marcescens short-chain dehydrogenase/reductase for stereoselective synthesis of (R)-phenylephrine.	Liu JS, Kuan YC, Tsou Y, Lin TY, Hsu WH, Yang MT, Lin JY, Wang WC.	Sci Rep	10.1038/s41598-018-19235-y	2018
Metabolism	Deciphering the Che2 chemosensory pathway and the roles of individual Che2 proteins from Pseudomonas aeruginosa.	Orillard E, Watts KJ.	Mol Microbiol	10.1111/mmi.14612	2021
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	Aii810, a Novel Cold-Adapted N-Acylhomoserine Lactonase Discovered in a Metagenome, Can Strongly Attenuate Pseudomonas aeruginosa Virulence Factors and Biofilm Formation.	Fan X, Liang M, Wang L, Chen R, Li H, Liu X.	Front Microbiol	10.3389/fmicb.2017.01950	2017
Metabolism	Metabolism of 2,2'- and 3,3'-dihydroxybiphenyl by the biphenyl catabolic pathway of Comamonas testosteroni B-356.	Sondossi M, Barriault D, Sylvestre M.	Appl Environ Microbiol	10.1128/aem.70.1.174-181.2004	2004
	Virulence determinants, drug resistance and mobile genetic elements of Laribacter hongkongensis: a genome-wide analysis.	Lau SK, Wong GK, Tsang AK, Teng JL, Fan RY, Tse H, Yuen KY, Woo PC.	Cell Biosci	10.1186/2045-3701-1-17	2011
Enzymology	Implanted-port-catheter-related sepsis caused by Acidovorax avenae and methicillin-sensitive Staphylococcus aureus.	Malkan AD, Strollo W, Scholand SJ, Dudrick SJ.	J Clin Microbiol	10.1128/jcm.01093-09	2009
Enzymology	Airway infection with a novel Cupriavidus species in persons with cystic fibrosis.	Kalka-Moll WM, LiPuma JJ, Accurso FJ, Plum G, van Koningsbruggen S, Vandamme P.	J Clin Microbiol	10.1128/jcm.00846-09	2009
Enzymology	The conserved cis-Pro39 residue plays a crucial role in the proper positioning of the catalytic base Asp38 in ketosteroid isomerase from Comamonas testosteroni.	Nam GH, Cha SS, Yun YS, Oh YH, Hong BH, Lee HS, Choi KY.	Biochem J	10.1042/bj20030263	2003
Metabolism	RP4::Mu3A-mediated in vivo cloning and transfer of a chlorobiphenyl catabolic pathway.	Springael D, van Thor J, Goorissen H, Ryngaert A, De Baere R, Van Hauwe P, Commandeur LC, Parsons JR, De Wachter R, Mergeay M.	Microbiology (Reading)	10.1099/13500872-142-11-3283	1996
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Metabolism	Biochemical and Structural Basis of Triclosan Resistance in a Novel Enoyl-Acyl Carrier Protein Reductase.	Khan R, Zeb A, Roy N, Thapa Magar R, Kim HJ, Lee KW, Lee SW.	Antimicrob Agents Chemother	10.1128/aac.00648-18	2018
	Culturable gut microbiota diversity in zebrafish.	Cantas L, Sorby JR, Alestrom P, Sorum H.	Zebrafish	10.1089/zeb.2011.0712	2012
Metabolism	Active site directed mutagenesis of 3 beta/17 beta-hydroxysteroid dehydrogenase establishes differential effects on short-chain dehydrogenase/reductase reactions.	Oppermann UC, Filling C, Berndt KD, Persson B, Benach J, Ladenstein R, Jornvall H.	Biochemistry	10.1021/bi961803v	1997
Metabolism	Production of selenium nanoparticles in Pseudomonas putida KT2440.	Avendano R, Chaves N, Fuentes P, Sanchez E, Jimenez JI, Chavarria M.	Sci Rep	10.1038/srep37155	2016
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	Comparative analysis of myxococcus predation on soil bacteria.	Morgan AD, MacLean RC, Hillesland KL, Velicer GJ.	Appl Environ Microbiol	10.1128/aem.00414-10	2010
Metabolism	Crystal structure of the ligand-binding domain of a LysR-type transcriptional regulator: transcriptional activation via a rotary switch.	Kim Y, Chhor G, Tsai CS, Winans JB, Jedrzejczak R, Joachimiak A, Winans SC.	Mol Microbiol	10.1111/mmi.14115	2018
Phylogeny	Application of SmartGene IDNS software to partial 16S rRNA gene sequences for a diverse group of bacteria in a clinical laboratory.	Simmon KE, Croft AC, Petti CA.	J Clin Microbiol	10.1128/jcm.01364-06	2006
Metabolism	Integrated multi-omics analyses reveal the biochemical mechanisms and phylogenetic relevance of anaerobic androgen biodegradation in the environment.	Yang FC, Chen YL, Tang SL, Yu CP, Wang PH, Ismail W, Wang CH, Ding JY, Yang CY, Yang CY, Chiang YR.	ISME J	10.1038/ismej.2015.255	2016
Phylogeny	Case of catheter sepsis with Ralstonia gilardii in a child with acute lymphoblastic leukemia.	Wauters G, Claeys G, Verschraegen G, De Baere T, Vandecruys E, Van Simaey L, De Ganck C, Vaneechoutte M.	J Clin Microbiol	10.1128/jcm.39.12.4583-4584.2001	2001
Metabolism	Biodegradation of mono-hydroxylated PCBs by Burkholderia xenovorans.	Tehrani R, Lyv MM, Kaveh R, Schnoor JL, Van Aken B.	Biotechnol Lett	10.1007/s10529-012-1037-x	2012
Metabolism	P212A Mutant of Dihydrodaidzein Reductase Enhances (S)-Equol Production and Enantioselectivity in a Recombinant Escherichia coli Whole-Cell Reaction System.	Lee PG, Kim J, Kim EJ, Jung E, Pandey BP, Kim BG.	Appl Environ Microbiol	10.1128/aem.03584-15	2016
Metabolism	Role of Festuca rubra and Festuca arundinacea in determinig the functional and genetic diversity of microorganisms and of the enzymatic activity in the soil polluted with diesel oil.	Borowik A, Wyszkowska J, Galazka A, Kucharski J.	Environ Sci Pollut Res Int	10.1007/s11356-019-05888-3	2019
Metabolism	Comparative Analysis of Bile-Salt Degradation in Sphingobium sp. Strain Chol11 and Pseudomonas stutzeri Strain Chol1 Reveals Functional Diversity of Proteobacterial Steroid Degradation Enzymes and Suggests a Novel Pathway for Side Chain Degradation.	Feller FM, Richtsmeier P, Wege M, Philipp B.	Appl Environ Microbiol	10.1128/aem.01453-21	2021
Metabolism	The role of cell bioaugmentation and gene bioaugmentation in the remediation of co-contaminated soils.	Pepper IL, Gentry TJ, Newby DT, Roane TM, Josephson KL.	Environ Health Perspect	10.1289/ehp.02110s6943	2002
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Metabolism	Kinetics and mechanism of heterogeneous hydrolysis of poly[(R)-3-hydroxybutyrate] film by PHA depolymerases.	Mukai K, Yamada K, Doi Y.	Int J Biol Macromol	10.1016/0141-8130(93)90054-p	1993
Phylogeny	Role of PhaC Type I and Type II Enzymes during PHA Biosynthesis.	Mezzolla V, D'Urso OF, Poltronieri P.	Polymers (Basel)	10.3390/polym10080910	2018
Enzymology	Crystallization and preliminary X-ray analysis of the complex of NADH and 3alpha-hydroxysteroid dehydrogenase from Pseudomonas sp. B-0831.	Kataoka S, Nakamura S, Ohkubo T, Ueda S, Uchiyama S, Kobayashi Y, Oda M.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309106016861	2006
Enzymology	Modeling the transition state structure to probe a reaction mechanism on the oxidation of quinoline by quinoline 2-oxidoreductase.	Bayle EA.	Chem Cent J	10.1186/s13065-016-0219-3	2016
Metabolism	Functional analysis of unique class II insertion sequence IS1071.	Sota M, Yano H, Nagata Y, Ohtsubo Y, Genka H, Anbutsu H, Kawasaki H, Tsuda M.	Appl Environ Microbiol	10.1128/aem.72.1.291-297.2006	2006
Pathogenicity	Occurrences and Characterization of Antibiotic-Resistant Bacteria and Genetic Determinants of Hospital Wastewater in a Tropical Country.	Le TH, Ng C, Chen H, Yi XZ, Koh TH, Barkham TM, Zhou Z, Gin KY.	Antimicrob Agents Chemother	10.1128/aac.01556-16	2016
Metabolism	Characterization of an Aldolase Involved in Cholesterol Side Chain Degradation in Mycobacterium tuberculosis.	Gilbert S, Hood L, Seah SYK.	J Bacteriol	10.1128/jb.00512-17	2018
Metabolism	Environmental dissolved organic matter governs biofilm formation and subsequent linuron degradation activity of a linuron-degrading bacterial consortium.	Horemans B, Breugelmans P, Hofkens J, Smolders E, Springael D.	Appl Environ Microbiol	10.1128/aem.03730-12	2013
Metabolism	Catabolism of the Last Two Steroid Rings in Mycobacterium tuberculosis and Other Bacteria.	Crowe AM, Casabon I, Brown KL, Liu J, Lian J, Rogalski JC, Hurst TE, Snieckus V, Foster LJ, Eltis LD.	mBio	10.1128/mbio.00321-17	2017
	Improved properties of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) produced by Comamonas sp. EB172 utilizing volatile fatty acids by regulating the nitrogen source.	Zakaria MR, Ariffin H, Abd-Aziz S, Hassan MA, Shirai Y.	Biomed Res Int	10.1155/2013/237806	2013
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Metabolism	Distinct Chemotaxis Protein Paralogs Assemble into Chemoreceptor Signaling Arrays To Coordinate Signaling Output.	O'Neal L, Gullett JM, Aksenova A, Hubler A, Briegel A, Ortega D, Kjaer A, Jensen G, Alexandre G.	mBio	10.1128/mbio.01757-19	2019
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Enzymology	Preliminary crystallographic analysis of salicylate 1,2-dioxygenase from Pseudaminobacter salicylatoxidans.	Matera I, Ferraroni M, Burger S, Stolz A, Briganti F.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309106016435	2006
Metabolism	Adaptive Responses of Shewanella decolorationis to Toxic Organic Extracellular Electron Acceptor Azo Dyes in Anaerobic Respiration.	Fang Y, Liu J, Kong G, Liu X, Yang Y, Li E, Chen X, Song D, You X, Sun G, Guo J, Xu M.	Appl Environ Microbiol	10.1128/aem.00550-19	2019
	Characteristics of a Recombinant 2,3-Dihydroxybiphenyl 1,2-Dioxygenase from Comamonas sp. Expressed in Escherichia coli.	Lee N, Kwon DY.	Indian J Microbiol	10.1007/s12088-016-0599-z	2016
	ArxA From Azoarcus sp. CIB, an Anaerobic Arsenite Oxidase From an Obligate Heterotrophic and Mesophilic Bacterium.	Durante-Rodriguez G, Fernandez-Llamosas H, Alonso-Fernandes E, Fernandez-Muniz MN, Munoz-Olivas R, Diaz E, Carmona M.	Front Microbiol	10.3389/fmicb.2019.01699	2019
	Epidemiological characteristics of blaNDM-1 in Enterobacteriaceae and the Acinetobacter calcoaceticus-Acinetobacter baumannii complex in China from 2011 to 2012.	Ou W, Cui L, Li Y, Zheng B, Lv Y.	PLoS One	10.1371/journal.pone.0113852	2014
Phylogeny	Identification of xenobiotic-degrading isolates from the beta subclass of the Proteobacteria by a polyphasic approach including 16S rRNA partial sequencing.	Busse HJ, el-Banna T, Oyaizu H, Auling G.	Int J Syst Bacteriol	10.1099/00207713-42-1-19	1992
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Metabolism	Dye-linked dehydrogenase activities for formate and formate esters in Amycolatopsis methanolica. Characterization of a molybdoprotein enzyme active with formate esters and aldehydes.	Van Ophem PW, Bystrykh LV, Duine JA.	Eur J Biochem	10.1111/j.1432-1033.1992.tb16955.x	1992
Genetics	Experimental and Genomic Evaluation of the Oestrogen Degrading Bacterium Rhodococcus equi ATCC13557.	Harthern-Flint SL, Dolfing J, Mrozik W, Meynet P, Eland LE, Sim M, Davenport RJ.	Front Microbiol	10.3389/fmicb.2021.670928	2021
Metabolism	Heat resistance mediated by a new plasmid encoded Clp ATPase, ClpK, as a possible novel mechanism for nosocomial persistence of Klebsiella pneumoniae.	Bojer MS, Struve C, Ingmer H, Hansen DS, Krogfelt KA.	PLoS One	10.1371/journal.pone.0015467	2010
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Genetics	Genome-Scale Metabolic Reconstruction of Acetobacter pasteurianus 386B, a Candidate Functional Starter Culture for Cocoa Bean Fermentation.	Pelicaen R, Gonze D, Teusink B, De Vuyst L, Weckx S.	Front Microbiol	10.3389/fmicb.2019.02801	2019
	Pleiotropic Effects of c-di-GMP Content in Pseudomonas syringae.	Wang T, Cai Z, Shao X, Zhang W, Xie Y, Zhang Y, Hua C, Schuster SC, Yang L, Deng X.	Appl Environ Microbiol	10.1128/aem.00152-19	2019
	Assessment of enzyme active site positioning and tests of catalytic mechanisms through X-ray-derived conformational ensembles.	Yabukarski F, Biel JT, Pinney MM, Doukov T, Powers AS, Fraser JS, Herschlag D.	Proc Natl Acad Sci U S A	10.1073/pnas.2011350117	2020
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Enzymology	Characterization of active recombinant 2,3-dihydro-2,3-dihydroxybiphenyl dehydrogenase from Comamonas testosteroni B-356 and sequence of the encoding gene (bphB).	Sylvestre M, Hurtubise Y, Barriault D, Bergeron J, Ahmad D.	Appl Environ Microbiol	10.1128/aem.62.8.2710-2715.1996	1996
Genetics	Complete genome sequencing and comparative genomic analyses of Bacillus sp. S3, a novel hyper Sb(III)-oxidizing bacterium.	Li J, Gu T, Li L, Wu X, Shen L, Yu R, Liu Y, Qiu G, Zeng W.	BMC Microbiol	10.1186/s12866-020-01737-3	2020
Metabolism	Bioaugmentation of activated sludge by an indigenous 3-chloroaniline-degrading Comamonas testosteroni strain, I2gfp.	Boon N, Goris J, De Vos P, Verstraete W, Top EM.	Appl Environ Microbiol	10.1128/aem.66.7.2906-2913.2000	2000
Enzymology	New chitosan-degrading strains that produce chitosanases similar to ChoA of Mitsuaria chitosanitabida.	Yun C, Amakata D, Matsuo Y, Matsuda H, Kawamukai M.	Appl Environ Microbiol	10.1128/aem.71.9.5138-5144.2005	2005
Enzymology	Expression, purification, crystallization and initial crystallographic characterization of the p-hydroxybenzoate hydroxylase from Corynebacterium glutamicum.	Kwon SY, Kang BS, Kim GH, Kim KJ.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309107046386	2007
Enzymology	Burkholderia pseudomallei: Challenges for the Clinical Microbiology Laboratory.	Hemarajata P, Baghdadi JD, Hoffman R, Humphries RM.	J Clin Microbiol	10.1128/jcm.01636-16	2016
Metabolism	Degradation of the acyl side chain of the steroid compound cholate in Pseudomonas sp. strain Chol1 proceeds via an aldehyde intermediate.	Holert J, Kulic Z, Yucel O, Suvekbala V, Suter MJ, Moller HM, Philipp B.	J Bacteriol	10.1128/jb.01961-12	2013
Metabolism	A novel hydrolase identified by genomic-proteomic analysis of phenylurea herbicide mineralization by Variovorax sp. strain SRS16.	Bers K, Leroy B, Breugelmans P, Albers P, Lavigne R, Sorensen SR, Aamand J, De Mot R, Wattiez R, Springael D.	Appl Environ Microbiol	10.1128/aem.06162-11	2011
Metabolism	Metabolic pathway for a new strain Pseudomonas synxantha LSH-7': from chemotaxis to uptake of n-hexadecane.	Meng L, Li H, Bao M, Sun P.	Sci Rep	10.1038/srep39068	2017
Enzymology	3,4-Dihydroxyphenylacetate 2,3-dioxygenase from Pseudomonas aeruginosa: An Fe(II)-containing enzyme with fast turnover.	Pornsuwan S, Maenpuen S, Kamutira P, Watthaisong P, Thotsaporn K, Tongsook C, Juttulapa M, Nijvipakul S, Chaiyen P.	PLoS One	10.1371/journal.pone.0171135	2017
	Changes in the deep subsurface microbial biosphere resulting from a field-scale CO2 geosequestration experiment.	Mu A, Boreham C, Leong HX, Haese RR, Moreau JW.	Front Microbiol	10.3389/fmicb.2014.00209	2014
Genetics	Development and Optimization of Metagenomic Next-Generation Sequencing Methods for Cerebrospinal Fluid Diagnostics.	Simner PJ, Miller HB, Breitwieser FP, Pinilla Monsalve G, Pardo CA, Salzberg SL, Sears CL, Thomas DL, Eberhart CG, Carroll KC.	J Clin Microbiol	10.1128/jcm.00472-18	2018
Metabolism	Characterization of the 3-O-methylgallate dioxygenase gene and evidence of multiple 3-O-methylgallate catabolic pathways in Sphingomonas paucimobilis SYK-6.	Kasai D, Masai E, Miyauchi K, Katayama Y, Fukuda M.	J Bacteriol	10.1128/jb.186.15.4951-4959.2004	2004
Metabolism	Transformation of hydroxylated derivatives of 2,5-dichlorobiphenyl and 2,4,6-trichlorobiphenyl by Burkholderia xenovorans LB400.	Tehrani R, Lyv MM, Van Aken B.	Environ Sci Pollut Res Int	10.1007/s11356-013-1629-6	2014
Metabolism	Biodegradation of polychlorinated biphenyls (PCBs) by the novel identified cyanobacterium Anabaena PD-1.	Zhang H, Jiang X, Lu L, Xiao W.	PLoS One	10.1371/journal.pone.0131450	2015
Enzymology	First comprehensively documented case of Paracoccus yeei infection in a human.	Funke G, Frodl R, Sommer H.	J Clin Microbiol	10.1128/jcm.42.7.3366-3368.2004	2004
Metabolism	Identification of a Chemoreceptor for C2 and C3 Carboxylic Acids.	Garcia V, Reyes-Darias JA, Martin-Mora D, Morel B, Matilla MA, Krell T.	Appl Environ Microbiol	10.1128/aem.01529-15	2015
Metabolism	Molecular cloning of novel genes for polycyclic aromatic hydrocarbon degradation from Comamonas testosteroni GZ39.	Goyal AK, Zylstra GJ.	Appl Environ Microbiol	10.1128/aem.62.1.230-236.1996	1996
Pathogenicity	C-di-GMP regulates Pseudomonas aeruginosa stress response to tellurite during both planktonic and biofilm modes of growth.	Chua SL, Sivakumar K, Rybtke M, Yuan M, Andersen JB, Nielsen TE, Givskov M, Tolker-Nielsen T, Cao B, Kjelleberg S, Yang L.	Sci Rep	10.1038/srep10052	2015
Pathogenicity	Ethanol Decreases Pseudomonas aeruginosa Flagellar Motility through the Regulation of Flagellar Stators.	Lewis KA, Baker AE, Chen AI, Harty CE, Kuchma SL, O'Toole GA, Hogan DA.	J Bacteriol	10.1128/jb.00285-19	2019
Metabolism	HipH Catalyzes the Hydroxylation of 4-Hydroxyisophthalate to Protocatechuate in 2,4-Xylenol Catabolism by Pseudomonas putida NCIMB 9866.	Chao HJ, Chen YF, Fang T, Xu Y, Huang WE, Zhou NY.	Appl Environ Microbiol	10.1128/aem.03105-15	2016
	Expression, crystallization and preliminary X-ray crystallographic studies of the outer membrane protein OmpW from Escherichia coli.	Albrecht R, Zeth K, Soding J, Lupas A, Linke D.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309106010190	2006
Metabolism	Characterization of the Vibrio fischeri Fatty Acid Chemoreceptors, VfcB and VfcB2.	Nikolakakis K, Monfils K, Moriano-Gutierrez S, Brennan CA, Ruby EG.	Appl Environ Microbiol	10.1128/aem.02856-15	2016
	Metabolic Value Chemoattractants Are Preferentially Recognized at Broad Ligand Range Chemoreceptor of Pseudomonas putida KT2440.	Fernandez M, Matilla MA, Ortega A, Krell T.	Front Microbiol	10.3389/fmicb.2017.00990	2017
Phylogeny	Searching for convergent evolution in manganese superoxidase dismutase using hydrophobic cluster analysis.	Xiang H, Zhang R, Li N, Vossbrinck CR.	Genet Mol Biol	10.1590/s1415-47572014005000008	2014
Enzymology	Crystal structure of quinone-dependent alcohol dehydrogenase from Pseudogluconobacter saccharoketogenes. A versatile dehydrogenase oxidizing alcohols and carbohydrates.	Rozeboom HJ, Yu S, Mikkelsen R, Nikolaev I, Mulder HJ, Dijkstra BW.	Protein Sci	10.1002/pro.2818	2015
Metabolism	Synergistic degradation of linuron by a bacterial consortium and isolation of a single linuron-degrading variovorax strain.	Dejonghe W, Berteloot E, Goris J, Boon N, Crul K, Maertens S, Hofte M, De Vos P, Verstraete W, Top EM.	Appl Environ Microbiol	10.1128/aem.69.3.1532-1541.2003	2003
	Mosquito C-type lectins maintain gut microbiome homeostasis.	Pang X, Xiao X, Liu Y, Zhang R, Liu J, Liu Q, Wang P, Cheng G.	Nat Microbiol	10.1038/nmicrobiol.2016.23	2016
Metabolism	A Mesh-Duox pathway regulates homeostasis in the insect gut.	Xiao X, Yang L, Pang X, Zhang R, Zhu Y, Wang P, Gao G, Cheng G.	Nat Microbiol	10.1038/nmicrobiol.2017.20	2017
	Efficacy and Safety of Ceftazidime-Avibactam Plus Metronidazole Versus Meropenem in the Treatment of Complicated Intra-abdominal Infection: Results From a Randomized, Controlled, Double-Blind, Phase 3 Program.	Mazuski JE, Gasink LB, Armstrong J, Broadhurst H, Stone GG, Rank D, Llorens L, Newell P, Pachl J.	Clin Infect Dis	10.1093/cid/ciw133	2016
Enzymology	Comamonas testosteroni 3-ketosteroid-delta 4(5 alpha)-dehydrogenase: gene and protein characterization.	Florin C, Kohler T, Grandguillot M, Plesiat P.	J Bacteriol	10.1128/jb.178.11.3322-3330.1996	1996
Genetics	Wild eel microbiome reveals that skin mucus of fish could be a natural niche for aquatic mucosal pathogen evolution.	Carda-Dieguez M, Ghai R, Rodriguez-Valera F, Amaro C.	Microbiome	10.1186/s40168-017-0376-1	2017
Enzymology	Biochemical and genetic investigation of initial reactions in aerobic degradation of the bile acid cholate in Pseudomonas sp. strain Chol1.	Birkenmaier A, Holert J, Erdbrink H, Moeller HM, Friemel A, Schoenenberger R, Suter MJ, Klebensberger J, Philipp B.	J Bacteriol	10.1128/jb.00665-07	2007
Enzymology	Contribution of a low-barrier hydrogen bond to catalysis is not significant in ketosteroid isomerase.	Jang DS, Choi G, Cha HJ, Shin S, Hong BH, Lee HJ, Lee HC, Choi KY.	Mol Cells	10.14348/molcells.2015.2266	2015
Metabolism	Transposon Mutagenesis Identifies Genes Critical for Growth of Pseudomonas nitroreducens TX1 on Octylphenol Polyethoxylates.	Nguyen TN, Yeh CW, Tsai PC, Lee K, Huang SL.	Appl Environ Microbiol	10.1128/aem.01907-16	2016
Enzymology	Identification of active site residues by site-directed mutagenesis of delta 5-3-ketosteroid isomerase from Pseudomonas putida biotype B.	Kim SW, Choi KY.	J Bacteriol	10.1128/jb.177.9.2602-2605.1995	1995
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Enzymology	Purification and characterization of the Comamonas testosteroni B-356 biphenyl dioxygenase components.	Hurtubise Y, Barriault D, Powlowski J, Sylvestre M.	J Bacteriol	10.1128/jb.177.22.6610-6618.1995	1995
Metabolism	The effects of individual PCB congeners on the soil bacterial community structure and the abundance of biphenyl dioxygenase genes.	Correa PA, Lin L, Just CL, Hu D, Hornbuckle KC, Schnoor JL, Van Aken B.	Environ Int	10.1016/j.envint.2009.07.015	2010
Metabolism	Cholest-4-en-3-one-delta 1-dehydrogenase, a flavoprotein catalyzing the second step in anoxic cholesterol metabolism.	Chiang YR, Ismail W, Gallien S, Heintz D, Van Dorsselaer A, Fuchs G.	Appl Environ Microbiol	10.1128/aem.01968-07	2008
Enzymology	Uncovering the determinants of a highly perturbed tyrosine pKa in the active site of ketosteroid isomerase.	Schwans JP, Sunden F, Gonzalez A, Tsai Y, Herschlag D.	Biochemistry	10.1021/bi401083b	2013
Metabolism	Hexavalent chromium reduction under fermentative conditions with lactate stimulated native microbial communities.	Somenahally AC, Mosher JJ, Yuan T, Podar M, Phelps TJ, Brown SD, Yang ZK, Hazen TC, Arkin AP, Palumbo AV, Van Nostrand JD, Zhou J, Elias DA.	PLoS One	10.1371/journal.pone.0083909	2013
Enzymology	Roles of reactive oxygen species-degrading enzymes of Francisella tularensis SCHU S4.	Binesse J, Lindgren H, Lindgren L, Conlan W, Sjostedt A.	Infect Immun	10.1128/iai.02488-14	2015
Metabolism	Hierarchy of Carbon Source Utilization in Soil Bacteria: Hegemonic Preference for Benzoate in Complex Aromatic Compound Mixtures Degraded by Cupriavidus pinatubonensis Strain JMP134.	Perez-Pantoja D, Leiva-Novoa P, Donoso RA, Little C, Godoy M, Pieper DH, Gonzalez B.	Appl Environ Microbiol	10.1128/aem.04207-14	2015
	Family shuffling of a targeted bphA region to engineer biphenyl dioxygenase.	Barriault D, Plante MM, Sylvestre M.	J Bacteriol	10.1128/jb.184.14.3794-3800.2002	2002
Enzymology	Microbiological pattern of arterial catheters in the intensive care unit.	Zhang L, Sriprakash KS, McMillan D, Gowardman JR, Patel B, Rickard CM.	BMC Microbiol	10.1186/1471-2180-10-266	2010
Enzymology	Heterotrophic Thaumarchaea with Small Genomes Are Widespread in the Dark Ocean.	Aylward FO, Santoro AE.	mSystems	10.1128/msystems.00415-20	2020
	In vivo, in vitro and in silico: an open space for the development of microbe-based applications of synthetic biology.	Danchin A.	Microb Biotechnol	10.1111/1751-7915.13937	2022
Metabolism	The MarR-Type Regulator Rdh2R Regulates rdh Gene Transcription in Dehalococcoides mccartyi Strain CBDB1.	Krasper L, Lilie H, Kublik A, Adrian L, Golbik R, Lechner U.	J Bacteriol	10.1128/jb.00419-16	2016
Metabolism	Poly(4-hydroxybutyrate) (P4HB) production in recombinant Escherichia coli: P4HB synthesis is uncoupled with cell growth.	Le Meur S, Zinn M, Egli T, Thony-Meyer L, Ren Q.	Microb Cell Fact	10.1186/1475-2859-12-123	2013
	Hybrid Two-Component Sensors for Identification of Bacterial Chemoreceptor Function.	Luu RA, Schomer RA, Brunton CN, Truong R, Ta AP, Tan WA, Parales JV, Wang YJ, Huo YW, Liu SJ, Ditty JL, Stewart V, Parales RE.	Appl Environ Microbiol	10.1128/aem.01626-19	2019
Enzymology	Limited Correlation of Shotgun Metagenomics Following Host Depletion and Routine Diagnostics for Viruses and Bacteria in Low Concentrated Surrogate and Clinical Samples.	Oechslin CP, Lenz N, Liechti N, Ryter S, Agyeman P, Bruggmann R, Leib SL, Beuret CM.	Front Cell Infect Microbiol	10.3389/fcimb.2018.00375	2018
	Bacillus cereus Biofilms-Same, Only Different.	Majed R, Faille C, Kallassy M, Gohar M.	Front Microbiol	10.3389/fmicb.2016.01054	2016
Enzymology	Self-subunit swapping occurs in another gene type of cobalt nitrile hydratase.	Liu Y, Cui W, Xia Y, Cui Y, Kobayashi M, Zhou Z.	PLoS One	10.1371/journal.pone.0050829	2012
Metabolism	Biochemical characterization of the CDP-D-arabinitol biosynthetic pathway in Streptococcus pneumoniae 17F.	Wang Q, Xu Y, Perepelov AV, Knirel YA, Reeves PR, Shashkov AS, Guo X, Ding P, Feng L.	J Bacteriol	10.1128/jb.06487-11	2012
Metabolism	Interspecies systems biology uncovers metabolites affecting C. elegans gene expression and life history traits.	Watson E, MacNeil LT, Ritter AD, Yilmaz LS, Rosebrock AP, Caudy AA, Walhout AJ.	Cell	10.1016/j.cell.2014.01.047	2014
Metabolism	Major sulfonate transporter Soa1 in Saccharomyces cerevisiae and considerable substrate diversity in its fungal family.	Holt S, Kankipati H, De Graeve S, Van Zeebroeck G, Foulquie-Moreno MR, Lindgreen S, Thevelein JM.	Nat Commun	10.1038/ncomms14247	2017
Metabolism	Proteogenomic elucidation of the initial steps in the benzene degradation pathway of a novel halophile, Arhodomonas sp. strain Rozel, isolated from a hypersaline environment.	Dalvi S, Azetsu S, Patrauchan MA, Aktas DF, Fathepure BZ.	Appl Environ Microbiol	10.1128/aem.01327-12	2012
Metabolism	Molecular and catalytic properties of the aldehyde dehydrogenase of Gluconacetobacter diazotrophicus, a quinoheme protein containing pyrroloquinoline quinone, cytochrome b, and cytochrome c.	Gomez-Manzo S, Chavez-Pacheco JL, Contreras-Zentella M, Sosa-Torres ME, Arreguin-Espinosa R, Perez de la Mora M, Membrillo-Hernandez J, Escamilla JE.	J Bacteriol	10.1128/jb.00589-10	2010
Metabolism	Most mutant OccR proteins that are defective in positive control hold operator DNA in a locked high-angle bend.	Tsai CS, Chen CS, Winans SC.	J Bacteriol	10.1128/jb.05352-11	2011
	Biofilm development and enhanced stress resistance of a model, mixed-species community biofilm.	Lee KW, Periasamy S, Mukherjee M, Xie C, Kjelleberg S, Rice SA.	ISME J	10.1038/ismej.2013.194	2014
Metabolism	Oxidative opening of the aromatic ring: Tracing the natural history of a large superfamily of dioxygenase domains and their relatives.	Burroughs AM, Glasner ME, Barry KP, Taylor EA, Aravind L.	J Biol Chem	10.1074/jbc.ra119.007595	2019
Metabolism	Generation by a widely applicable approach of a hybrid dioxygenase showing improved oxidation of polychlorobiphenyls.	Camara B, Seeger M, Gonzalez M, Standfuss-Gabisch C, Kahl S, Hofer B.	Appl Environ Microbiol	10.1128/aem.02523-06	2007
	Phylogenetic and functional diversity of metagenomic libraries of phenol degrading sludge from petroleum refinery wastewater treatment system.	Silva CC, Hayden H, Sawbridge T, Mele P, Kruger RH, Rodrigues MV, Costa GG, Vidal RO, Sousa MP, Torres AP, Santiago VM, Oliveira VM.	AMB Express	10.1186/2191-0855-2-18	2012
Genetics	A genomic approach to understand interactions between Streptococcus pneumoniae and its bacteriophages.	Leprohon P, Gingras H, Ouennane S, Moineau S, Ouellette M.	BMC Genomics	10.1186/s12864-015-2134-8	2015
Enzymology	Genetic and biochemical characterization of a 2-pyrone-4, 6-dicarboxylic acid hydrolase involved in the protocatechuate 4, 5-cleavage pathway of Sphingomonas paucimobilis SYK-6.	Masai E, Shinohara S, Hara H, Nishikawa S, Katayama Y, Fukuda M.	J Bacteriol	10.1128/jb.181.1.55-62.1999	1999
Metabolism	Involvement of the terminal oxygenase beta subunit in the biphenyl dioxygenase reactivity pattern toward chlorobiphenyls.	Hurtubise Y, Barriault D, Sylvestre M.	J Bacteriol	10.1128/jb.180.22.5828-5835.1998	1998
	Microbiology of airway disease in a cohort of patients with cystic fibrosis.	Lambiase A, Raia V, Del Pezzo M, Sepe A, Carnovale V, Rossano F.	BMC Infect Dis	10.1186/1471-2334-6-4	2006
Metabolism	Identification of bacteria utilizing biphenyl, benzoate, and naphthalene in long-term contaminated soil.	Uhlik O, Wald J, Strejcek M, Musilova L, Ridl J, Hroudova M, Vlcek C, Cardenas E, Mackova M, Macek T.	PLoS One	10.1371/journal.pone.0040653	2012
Metabolism	Novel dehalogenase mechanism for 2,3-dichloro-1-propanol utilization in Pseudomonas putida strain MC4.	Arif MI, Samin G, van Leeuwen JG, Oppentocht J, Janssen DB.	Appl Environ Microbiol	10.1128/aem.00760-12	2012
Enzymology	Heterologous expression and characterization of the purified oxygenase component of Rhodococcus globerulus P6 biphenyl dioxygenase and of chimeras derived from it.	Chebrou H, Hurtubise Y, Barriault D, Sylvestre M.	J Bacteriol	10.1128/jb.181.16.4805-4811.1999	1999
Pathogenicity	Functional gene diversity of soil microbial communities from five oil-contaminated fields in China.	Liang Y, Van Nostrand JD, Deng Y, He Z, Wu L, Zhang X, Li G, Zhou J.	ISME J	10.1038/ismej.2010.142	2011
Metabolism	A tale of two oxidation states: bacterial colonization of arsenic-rich environments.	Muller D, Medigue C, Koechler S, Barbe V, Barakat M, Talla E, Bonnefoy V, Krin E, Arsene-Ploetze F, Carapito C, Chandler M, Cournoyer B, Cruveiller S, Dossat C, Duval S, Heymann M, Leize E, Lieutaud A, Lievremont D, Makita Y, Mangenot S, Nitschke W, Ortet P, Perdrial N, Schoepp B, Siguier P, Simeonova DD, Rouy Z, Segurens B, Turlin E, Vallenet D, Van Dorsselaer A, Weiss S, Weissenbach J, Lett MC, Danchin A, Bertin PN.	PLoS Genet	10.1371/journal.pgen.0030053	2007
Enzymology	Impact of mutation on proton transfer reactions in ketosteroid isomerase: insights from molecular dynamics simulations.	Chakravorty DK, Hammes-Schiffer S.	J Am Chem Soc	10.1021/ja102714u	2010
Metabolism	Dynamics of the linuron hydrolase libA gene pool size in response to linuron application and environmental perturbations in agricultural soil and on-farm biopurification systems.	Bers K, Sniegowski K, De Mot R, Springael D.	Appl Environ Microbiol	10.1128/aem.06991-11	2012
Metabolism	Construction and application of variants of the Pseudomonas fluorescens EBC191 arylacetonitrilase for increased production of acids or amides.	Sosedov O, Baum S, Burger S, Matzer K, Kiziak C, Stolz A.	Appl Environ Microbiol	10.1128/aem.00341-10	2010
Pathogenicity	Rhizobium leguminosarum bv. viciae 3841 Adapts to 2,4-Dichlorophenoxyacetic Acid with "Auxin-Like" Morphological Changes, Cell Envelope Remodeling and Upregulation of Central Metabolic Pathways.	Bhat SV, Booth SC, McGrath SG, Dahms TE.	PLoS One	10.1371/journal.pone.0123813	2014
	Modelling of mixed chemostat cultures of an aerobic bacterium, Comamonas testosteroni, and an anaerobic bacterium, Veillonella alcalescens: comparison with experimental data.	Gerritse J, Schut F, Gottschal JC.	Appl Environ Microbiol	10.1128/aem.58.5.1466-1476.1992	1992
Enzymology	Biochemical and genetic characterization of a gentisate 1, 2-dioxygenase from Sphingomonas sp. strain RW5.	Werwath J, Arfmann HA, Pieper DH, Timmis KN, Wittich RM.	J Bacteriol	10.1128/jb.180.16.4171-4176.1998	1998
Metabolism	Study of anoxic and oxic cholesterol metabolism by Sterolibacterium denitrificans.	Chiang YR, Ismail W, Heintz D, Schaeffer C, Van Dorsselaer A, Fuchs G.	J Bacteriol	10.1128/jb.01525-07	2008
Metabolism	Isolation of the phe-operon from G. stearothermophilus comprising the phenol degradative meta-pathway genes and a novel transcriptional regulator.	Omokoko B, Jantges UK, Zimmermann M, Reiss M, Hartmeier W.	BMC Microbiol	10.1186/1471-2180-8-197	2008
Metabolism	Identification and functional characterization of CbaR, a MarR-like modulator of the cbaABC-encoded chlorobenzoate catabolism pathway.	Providenti MA, Wyndham RC.	Appl Environ Microbiol	10.1128/aem.67.8.3530-3541.2001	2001
Metabolism	Substrate uptake and subcellular compartmentation of anoxic cholesterol catabolism in Sterolibacterium denitrificans.	Lin CW, Wang PH, Ismail W, Tsai YW, El Nayal A, Yang CY, Yang FC, Wang CH, Chiang YR.	J Biol Chem	10.1074/jbc.m114.603779	2015
Metabolism	mosGCTL-7, a C-Type Lectin Protein, Mediates Japanese Encephalitis Virus Infection in Mosquitoes.	Liu K, Qian Y, Jung YS, Zhou B, Cao R, Shen T, Shao D, Wei J, Ma Z, Chen P, Zhu H, Qiu Y.	J Virol	10.1128/jvi.01348-16	2017
Metabolism	Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation.	Salinero KK, Keller K, Feil WS, Feil H, Trong S, Di Bartolo G, Lapidus A.	BMC Genomics	10.1186/1471-2164-10-351	2009
Metabolism	igr Genes and Mycobacterium tuberculosis cholesterol metabolism.	Chang JC, Miner MD, Pandey AK, Gill WP, Harik NS, Sassetti CM, Sherman DR.	J Bacteriol	10.1128/jb.00452-09	2009
Metabolism	The mechanism of enterohepatic circulation in the formation of gallstone disease.	Cai JS, Chen JH.	J Membr Biol	10.1007/s00232-014-9715-3	2014
Metabolism	An oxygenase-independent cholesterol catabolic pathway operates under oxic conditions.	Wang PH, Lee TH, Ismail W, Tsai CY, Lin CW, Tsai YW, Chiang YR.	PLoS One	10.1371/journal.pone.0066675	2013
Metabolism	Fido, a novel AMPylation domain common to fic, doc, and AvrB.	Kinch LN, Yarbrough ML, Orth K, Grishin NV.	PLoS One	10.1371/journal.pone.0005818	2009
	Anesthetic interaction with ketosteroid isomerase: insights from molecular dynamics simulations.	Yonkunas MJ, Xu Y, Tang P.	Biophys J	10.1529/biophysj.105.063396	2005
	Characterization and genomic analysis of kraft lignin biodegradation by the beta-proteobacterium Cupriavidus basilensis B-8.	Shi Y, Chai L, Tang C, Yang Z, Zhang H, Chen R, Chen Y, Zheng Y.	Biotechnol Biofuels	10.1186/1754-6834-6-1	2013
	Application of a battery of biotests for the determination of leachate toxicity to bacteria and invertebrates from sewage sludge-amended soil.	Malara A, Oleszczuk P.	Environ Sci Pollut Res Int	10.1007/s11356-012-1268-3	2013
Metabolism	Specificity in transition state binding: the Pauling model revisited.	Amyes TL, Richard JP.	Biochemistry	10.1021/bi301491r	2013
Enzymology	Ribonucleotide reduction in Pseudomonas species: simultaneous presence of active enzymes from different classes.	Jordan A, Torrents E, Sala I, Hellman U, Gibert I, Reichard P.	J Bacteriol	10.1128/jb.181.13.3974-3980.1999	1999
Enzymology	Two nearly identical aromatic compound hydrolase genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1.	Yamada A, Kishi H, Sugiyama K, Hatta T, Nakamura K, Masai E, Fukuda M.	Appl Environ Microbiol	10.1128/aem.64.6.2006-2012.1998	1998
Enzymology	Roles of dimerization in folding and stability of ketosteroid isomerase from Pseudomonas putida biotype B.	Kim DH, Nam GH, Jang DS, Yun S, Choi G, Lee HC, Choi KY.	Protein Sci	10.1110/ps.18501	2001
Metabolism	Analyses of a polyhydroxyalkanoic acid granule-associated 16-kilodalton protein and its putative regulator in the pha locus of Paracoccus denitrificans.	Maehara A, Ueda S, Nakano H, Yamane T.	J Bacteriol	10.1128/jb.181.9.2914-2921.1999	1999
Metabolism	Degradation of tetrahydrofurfuryl alcohol by Ralstonia eutropha is initiated by an inducible pyrroloquinoline quinone-dependent alcohol dehydrogenase.	Zarnt G, Schrader T, Andreesen JR.	Appl Environ Microbiol	10.1128/aem.63.12.4891-4898.1997	1997
Metabolism	Biosynthesis of chiral 3-hydroxyvalerate from single propionate-unrelated carbon sources in metabolically engineered E. coli.	Tseng HC, Harwell CL, Martin CH, Prather KL.	Microb Cell Fact	10.1186/1475-2859-9-96	2010
Metabolism	Genetic analysis of a gene cluster for cyclohexanol oxidation in Acinetobacter sp. Strain SE19 by in vitro transposition.	Cheng Q, Thomas SM, Kostichka K, Valentine JR, Nagarajan V.	J Bacteriol	10.1128/jb.182.17.4744-4751.2000	2000
	Improved in situ hybridization efficiency with locked-nucleic-acid-incorporated DNA probes.	Kubota K, Ohashi A, Imachi H, Harada H.	Appl Environ Microbiol	10.1128/aem.03039-05	2006
Metabolism	Deciphering the transcriptional regulation of cholesterol catabolic pathway in mycobacteria: identification of the inducer of KstR repressor.	Garcia-Fernandez E, Medrano FJ, Galan B, Garcia JL.	J Biol Chem	10.1074/jbc.m113.545715	2014
Enzymology	Development of rRNA-based PCR assays for identification of Burkholderia cepacia complex isolates recovered from cystic fibrosis patients.	LiPuma JJ, Dulaney BJ, McMenamin JD, Whitby PW, Stull TL, Coenye T, Vandamme P.	J Clin Microbiol	10.1128/jcm.37.10.3167-3170.1999	1999
	Enatiomerically pure hydroxycarboxylic acids: current approaches and future perspectives.	Ren Q, Ruth K, Thony-Meyer L, Zinn M.	Appl Microbiol Biotechnol	10.1007/s00253-010-2530-6	2010
Metabolism	Structure and ligand binding properties of the epoxidase component of styrene monooxygenase .	Ukaegbu UE, Kantz A, Beaton M, Gassner GT, Rosenzweig AC.	Biochemistry	10.1021/bi901693u	2010
Enzymology	Dimerization and enzymatic activity of fungal 17beta-hydroxysteroid dehydrogenase from the short-chain dehydrogenase/reductase superfamily.	Kristan K, Deluca D, Adamski J, Stojan J, Rizner TL.	BMC Biochem	10.1186/1471-2091-6-28	2005
Metabolism	Bacterially produced metabolites protect C. elegans neurons from degeneration.	Urrutia A, Garcia-Angulo VA, Fuentes A, Caneo M, Legue M, Urquiza S, Delgado SE, Ugalde J, Burdisso P, Calixto A.	PLoS Biol	10.1371/journal.pbio.3000638	2020
Metabolism	Bacterial steroid hydroxylases: enzyme classes, their functions and comparison of their catalytic mechanisms.	Szaleniec M, Wojtkiewicz AM, Bernhardt R, Borowski T, Donova M.	Appl Microbiol Biotechnol	10.1007/s00253-018-9239-3	2018
Metabolism	Hydrogen bonding in the active site of ketosteroid isomerase: electronic inductive effects and hydrogen bond coupling.	Hanoian P, Sigala PA, Herschlag D, Hammes-Schiffer S.	Biochemistry	10.1021/bi101428e	2010
	Transmission of nephridial bacteria of the earthworm Eisenia fetida.	Davidson SK, Stahl DA.	Appl Environ Microbiol	10.1128/aem.72.1.769-775.2006	2006
Enzymology	Structural double-mutant cycle analysis of a hydrogen bond network in ketosteroid isomerase from Pseudomonas putida biotype B.	Jang DS, Cha HJ, Cha SS, Hong BH, Ha NC, Lee JY, Oh BH, Lee HS, Choi KY.	Biochem J	10.1042/bj20031871	2004
Metabolism	Distinct roles for two CYP226 family cytochromes P450 in abietane diterpenoid catabolism by Burkholderia xenovorans LB400.	Smith DJ, Patrauchan MA, Florizone C, Eltis LD, Mohn WW.	J Bacteriol	10.1128/jb.01530-07	2008
Enzymology	Purification and characterization of a three-component salicylate 1-hydroxylase from Sphingomonas sp. strain CHY-1.	Jouanneau Y, Micoud J, Meyer C.	Appl Environ Microbiol	10.1128/aem.01519-07	2007
	A genetic strategy for probing the functional diversity of magnetosome formation.	Rahn-Lee L, Byrne ME, Zhang M, Le Sage D, Glenn DR, Milbourne T, Walsworth RL, Vali H, Komeili A.	PLoS Genet	10.1371/journal.pgen.1004811	2015
	Marine crude-oil biodegradation: a central role for interspecies interactions.	McGenity TJ, Folwell BD, McKew BA, Sanni GO.	Aquat Biosyst	10.1186/2046-9063-8-10	2012
Phylogeny	Bioinformatic characterization of the 4-Toluene Sulfonate Uptake Permease (TSUP) family of transmembrane proteins.	Shlykov MA, Zheng WH, Chen JS, Saier MH.	Biochim Biophys Acta	10.1016/j.bbamem.2011.12.005	2012
Metabolism	Spatial and temporal variation of phenanthrene-degrading bacteria in intertidal sediments.	Berardesco G, Dyhrman S, Gallagher E, Shiaris MP.	Appl Environ Microbiol	10.1128/aem.64.7.2560-2565.1998	1998
Metabolism	A second 5-carboxyvanillate decarboxylase gene, ligW2, is important for lignin-related biphenyl catabolism in Sphingomonas paucimobilis SYK-6.	Peng X, Masai E, Kasai D, Miyauchi K, Katayama Y, Fukuda M.	Appl Environ Microbiol	10.1128/aem.71.9.5014-5021.2005	2005
Metabolism	Purification and characterization of an arene cis-dihydrodiol dehydrogenase endowed with broad substrate specificity toward polycyclic aromatic hydrocarbon dihydrodiols.	Jouanneau Y, Meyer C.	Appl Environ Microbiol	10.1128/aem.00395-06	2006
Metabolism	Analysis of amino acid residues involved in catalysis of polyethylene glycol dehydrogenase from Sphingopyxis terrae, using three-dimensional molecular modeling-based kinetic characterization of mutants.	Ohta T, Kawabata T, Nishikawa K, Tani A, Kimbara K, Kawai F.	Appl Environ Microbiol	10.1128/aem.02174-05	2006
Metabolism	Catalytic and molecular properties of the quinohemoprotein tetrahydrofurfuryl alcohol dehydrogenase from Ralstonia eutropha strain Bo.	Zarnt G, Schrader T, Andreesen JR.	J Bacteriol	10.1128/jb.183.6.1954-1960.2001	2001
Enzymology	Quantitative, directional measurement of electric field heterogeneity in the active site of ketosteroid isomerase.	Fafarman AT, Sigala PA, Schwans JP, Fenn TD, Herschlag D, Boxer SG.	Proc Natl Acad Sci U S A	10.1073/pnas.1111566109	2012
Metabolism	Monitoring bacterial transport by stable isotope enrichment of cells.	Holben WE, Ostrom PH.	Appl Environ Microbiol	10.1128/aem.66.11.4935-4939.2000	2000
Enzymology	Representative freshwater bacterioplankton isolated from Crater Lake, Oregon.	Page KA, Connon SA, Giovannoni SJ.	Appl Environ Microbiol	10.1128/aem.70.11.6542-6550.2004	2004
Pathogenicity	Comparative transcriptome analysis of Methylibium petroleiphilum PM1 exposed to the fuel oxygenates methyl tert-butyl ether and ethanol.	Hristova KR, Schmidt R, Chakicherla AY, Legler TC, Wu J, Chain PS, Scow KM, Kane SR.	Appl Environ Microbiol	10.1128/aem.01604-07	2007
Enzymology	Degradation of polychlorinated biphenyl metabolites by naphthalene-catabolizing enzymes.	Barriault D, Durand J, Maaroufi H, Eltis LD, Sylvestre M.	Appl Environ Microbiol	10.1128/aem.64.12.4637-4642.1998	1998
Metabolism	In the NadR regulon, adhesins and diverse meningococcal functions are regulated in response to signals in human saliva.	Fagnocchi L, Pigozzi E, Scarlato V, Delany I.	J Bacteriol	10.1128/jb.06161-11	2012
Metabolism	Direct ring fission of salicylate by a salicylate 1,2-dioxygenase activity from Pseudaminobacter salicylatoxidans.	Hintner JP, Lechner C, Riegert U, Kuhm AE, Storm T, Reemtsma T, Stolz A.	J Bacteriol	10.1128/jb.183.23.6936-6942.2001	2001
	Regulated polyploidy in halophilic archaea.	Breuert S, Allers T, Spohn G, Soppa J.	PLoS One	10.1371/journal.pone.0000092	2006
Enzymology	Cloning of a nitrilase gene from the cyanobacterium Synechocystis sp. strain PCC6803 and heterologous expression and characterization of the encoded protein.	Heinemann U, Engels D, Burger S, Kiziak C, Mattes R, Stolz A.	Appl Environ Microbiol	10.1128/aem.69.8.4359-4366.2003	2003
Phylogeny	A new classification system for bacterial Rieske non-heme iron aromatic ring-hydroxylating oxygenases.	Kweon O, Kim SJ, Baek S, Chae JC, Adjei MD, Baek DH, Kim YC, Cerniglia CE.	BMC Biochem	10.1186/1471-2091-9-11	2008
	The arthrobacter arilaitensis Re117 genome sequence reveals its genetic adaptation to the surface of cheese.	Monnet C, Loux V, Gibrat JF, Spinnler E, Barbe V, Vacherie B, Gavory F, Gourbeyre E, Siguier P, Chandler M, Elleuch R, Irlinger F, Vallaeys T.	PLoS One	10.1371/journal.pone.0015489	2010
Metabolism	Pyrroloquinoline quinone-dependent dehydrogenases from Ketogulonicigenium vulgare catalyze the direct conversion of L-sorbosone to L-ascorbic acid.	Miyazaki T, Sugisawa T, Hoshino T.	Appl Environ Microbiol	10.1128/aem.72.2.1487-1495.2006	2006
Metabolism	Characterization of the 5-carboxyvanillate decarboxylase gene and its role in lignin-related biphenyl catabolism in Sphingomonas paucimobilis SYK-6.	Peng X, Masai E, Kitayama H, Harada K, Katayama Y, Fukuda M.	Appl Environ Microbiol	10.1128/aem.68.9.4407-4415.2002	2002
	Biodegradability of Poly(hydroxyalkanoate) Materials	Numata K, Abe H, Iwata T.	Materials (Basel)		2009
Metabolism	Quantitative determination of free-DNA uptake in river bacteria at the single-cell level by in situ rolling-circle amplification.	Maruyama F, Tani K, Kenzaka T, Yamaguchi N, Nasu M.	Appl Environ Microbiol	10.1128/aem.03035-05	2006
Metabolism	Chlorinated biphenyl mineralization by individual populations and consortia of freshwater bacteria.	Pettigrew CA, Breen A, Corcoran C, Sayler GS.	Appl Environ Microbiol	10.1128/aem.56.7.2036-2045.1990	1990
Metabolism	AniA regulates reserve polymer accumulation and global protein expression in Rhizobium etli.	Encarnacion S, del Carmen Vargas M, Dunn MF, Davalos A, Mendoza G, Mora Y, Mora J.	J Bacteriol	10.1128/jb.184.8.2287-2295.2002	2002
Enzymology	Cultivation-independent, semiautomatic determination of absolute bacterial cell numbers in environmental samples by fluorescence in situ hybridization.	Daims H, Ramsing NB, Schleifer KH, Wagner M.	Appl Environ Microbiol	10.1128/aem.67.12.5810-5818.2001	2001
Pathogenicity	Soil microbial community responses to additions of organic carbon substrates and heavy metals (Pb and Cr).	Nakatsu CH, Carmosini N, Baldwin B, Beasley F, Kourtev P, Konopka A.	Appl Environ Microbiol	10.1128/aem.71.12.7679-7689.2005	2005
Enzymology	Substrate specificity and expression of three 2,3-dihydroxybiphenyl 1,2-dioxygenases from Rhodococcus globerulus strain P6.	McKay DB, Prucha M, Reineke W, Timmis KN, Pieper DH.	J Bacteriol	10.1128/jb.185.9.2944-2951.2003	2003
Metabolism	Substrate specificity of naphthalene dioxygenase: effect of specific amino acids at the active site of the enzyme.	Parales RE, Lee K, Resnick SM, Jiang H, Lessner DJ, Gibson DT.	J Bacteriol	10.1128/jb.182.6.1641-1649.2000	2000
Enzymology	Substrate range and genetic analysis of Acinetobacter vanillate demethylase.	Morawski B, Segura A, Ornston LN.	J Bacteriol	10.1128/jb.182.5.1383-1389.2000	2000
	Recent trends in biocatalysis.	Yi D, Bayer T, Badenhorst CPS, Wu S, Doerr M, Hohne M, Bornscheuer UT.	Chem Soc Rev	10.1039/d0cs01575j	2021
	Strong inter-population cooperation leads to partner intermixing in microbial communities.	Momeni B, Brileya KA, Fields MW, Shou W.	Elife	10.7554/elife.00230	2013
Metabolism	Phylogenetic differences between particle-associated and planktonic ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in the Northwestern Mediterranean Sea.	Phillips CJ, Smith Z, Embley TM, Prosser JI.	Appl Environ Microbiol	10.1128/aem.65.2.779-786.1999	1999
Metabolism	Isolation of marine polycyclic aromatic hydrocarbon (PAH)-degrading Cycloclasticus strains from the Gulf of Mexico and comparison of their PAH degradation ability with that of puget sound Cycloclasticus strains.	Geiselbrecht AD, Hedlund BP, Tichi MA, Staley JT.	Appl Environ Microbiol	10.1128/aem.64.12.4703-4710.1998	1998
	Analysis of beta-subgroup proteobacterial ammonia oxidizer populations in soil by denaturing gradient gel electrophoresis analysis and hierarchical phylogenetic probing	Stephen JR, Kowalchuk GA, Bruns MAV, McCaig AE, Phillips CJ, Embley TM, Prosser JI.	Appl Environ Microbiol	10.1128/aem.64.8.2958-2965.1998	1998
Phylogeny	Genotyping Cryptosporidium parvum with an hsp70 single-nucleotide polymorphism microarray.	Straub TM, Daly DS, Wunshel S, Rochelle PA, DeLeon R, Chandler DP.	Appl Environ Microbiol	10.1128/aem.68.4.1817-1826.2002	2002
Metabolism	Characterization of the hca cluster encoding the dioxygenolytic pathway for initial catabolism of 3-phenylpropionic acid in Escherichia coli K-12.	Diaz E, Ferrandez A, Garcia JL.	J Bacteriol	10.1128/jb.180.11.2915-2923.1998	1998
Metabolism	Testing electrostatic complementarity in enzyme catalysis: hydrogen bonding in the ketosteroid isomerase oxyanion hole.	Kraut DA, Sigala PA, Pybus B, Liu CW, Ringe D, Petsko GA, Herschlag D.	PLoS Biol	10.1371/journal.pbio.0040099	2006
Metabolism	Complete sequence of a 184-kilobase catabolic plasmid from Sphingomonas aromaticivorans F199.	Romine MF, Stillwell LC, Wong KK, Thurston SJ, Sisk EC, Sensen C, Gaasterland T, Fredrickson JK, Saffer JD.	J Bacteriol	10.1128/jb.181.5.1585-1602.1999	1999
Enzymology	Cloning and identification of a new repressor of 3,17beta-Hydroxysteroid dehydrogenase of Comamonas testosteroni.	Xie W, Xia Q, Chen L, Xiong G, Gao Y, Yu Y, He X	Mol Biol Rep	10.1007/s11033-021-06566-9	2021
Metabolism	Characterization of a LuxR repressor for 3,17beta-HSD in Comamonas testosteroni ATCC11996.	Ji Y, Yang J, Gao L, Xiong G, Yu Y, Zhang Y	Chem Biol Interact	10.1016/j.cbi.2020.109271	2020
Enzymology	The characterization of a short chain dehydrogenase/reductase (SDRx) in Comamonas testosteroni.	Liu C, Liu K, Zhao C, Gong P, Yu Y	Toxicol Rep	10.1016/j.toxrep.2020.02.015	2020
Metabolism	Quantitative determination of testosterone levels with biolayer interferometry.	Zhang H, Li W, Luo H, Xiong G, Yu Y	Chem Biol Interact	10.1016/j.cbi.2017.05.013	2017
Enzymology	Functional analysis of a novel repressor LuxR in Comamonas testosteroni.	Ji Y, Pan T, Zhang Y, Xiong G, Yu Y	Chem Biol Interact	10.1016/j.cbi.2017.03.002	2017
Enzymology	Cloning, expression and characterization of a putative 2,5-diketo-D-gluconic acid reductase in Comamonas testosteroni.	Chen Y, Ji W, Zhang H, Zhang X, Yu Y	Chem Biol Interact	10.1016/j.cbi.2015.01.017	2015
Enzymology	Characterization of 3,17beta-hydroxysteroid dehydrogenase in Comamonas testosteroni.	Yu Y, Liu C, Wang B, Li Y, Zhang H	Chem Biol Interact	10.1016/j.cbi.2015.01.005	2015
Enzymology	Cloning and characterization of a novel beta-ketoacyl-ACP reductase from Comamonas testosteroni.	Zhang H, Ji Y, Wang Y, Zhang X, Yu Y	Chem Biol Interact	10.1016/j.cbi.2015.01.003	2015
Enzymology	Isolation and identification of a repressor TetR for 3,17beta-HSD expressional regulation in Comamonas testosteroni.	Pan T, Huang P, Xiong G, Maser E	Chem Biol Interact	10.1016/j.cbi.2014.12.034	2015
Enzymology	Identification and isolation of a regulator protein for 3,17beta-HSD expressional regulation in Comamonas testosteroni.	Wu Y, Huang P, Xiong G, Maser E	Chem Biol Interact	10.1016/j.cbi.2014.11.004	2014
Enzymology	Cloning, expression and characterization of a putative 7alpha-hydroxysteroid dehydrogenase in Comamonas testosteroni.	Ji W, Chen Y, Zhang H, Zhang X, Li Z, Yu Y	Microbiol Res	10.1016/j.micres.2013.07.009	2013
Metabolism	A novel transcriptional repressor PhaR for the steroid-inducible expression of the 3,17beta-hydroxysteroid dehydrogenase gene in Comamonas testosteroni ATCC11996.	Li M, Xiong G, Maser E	Chem Biol Interact	10.1016/j.cbi.2012.12.014	2013
Genetics	Genome sequence of Comamonas testosteroni ATCC 11996, a representative strain involved in steroid degradation.	Gong W, Kisiela M, Schilhabel MB, Xiong G, Maser E	J Bacteriol	10.1128/JB.06795-11	2012
Metabolism	Identification and characterization of the LysR-type transcriptional regulator HsdR for steroid-inducible expression of the 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase gene in Comamonas testosteroni.	Gong W, Xiong G, Maser E	Appl Environ Microbiol	10.1128/AEM.06872-11	2011
Metabolism	Characterization of the steroid degrading bacterium S19-1 from the Baltic Sea at Kiel, Germany.	Zhang T, Xiong G, Maser E	Chem Biol Interact	10.1016/j.cbi.2010.12.021	2010
Enzymology	Cloning, expression and characterization of a novel short-chain dehydrogenase/reductase (SDRx) in Comamonas testosteroni.	Gong W, Xiong G, Maser E	J Steroid Biochem Mol Biol	10.1016/j.jsbmb.2010.11.008	2010
Metabolism	Enhancement of cometabolic biodegradation of 4-chlorophenol induced with phenol and glucose as carbon sources by Comamonas testosteroni.	Tobajas M, Monsalvo VM, Mohedano AF, Rodriguez JJ	J Environ Manage	10.1016/j.jenvman.2010.09.030	2010
Enzymology	Isolates of Comamonas spp. exhibiting catalase and peroxidase activities and diversity of their responses to oxidative stress.	Buckova M, Godocikova J, Zamocky M, Polek B	Ecotoxicol Environ Saf	10.1016/j.ecoenv.2010.07.007	2010
Metabolism	Steroid degradation genes in Comamonas testosteroni TA441: Isolation of genes encoding a Delta4(5)-isomerase and 3alpha- and 3beta-dehydrogenases and evidence for a 100 kb steroid degradation gene hot spot.	Horinouchi M, Kurita T, Hayashi T, Kudo T	J Steroid Biochem Mol Biol	10.1016/j.jsbmb.2010.06.002	2010
Metabolism	Steroid degradation gene cluster of Comamonas testosteroni consisting of 18 putative genes from meta-cleavage enzyme gene tesB to regulator gene tesR.	Horinouchi M, Kurita T, Yamamoto T, Hatori E, Hayashi T, Kudo T	Biochem Biophys Res Commun	10.1016/j.bbrc.2004.09.096	2004
Metabolism	Purification and properties of a novel sulfatase from Pseudomonas testosteroni that hydrolyzed 3 beta-hydroxy-5-cholenoic acid 3-sulfate.	Tazuke Y, Matsuda K, Adachi K, Tsukada Y	Biosci Biotechnol Biochem	10.1271/bbb.62.1739	1998
Metabolism	Antibiotic resistance and enhanced insecticide catabolism as consequences of steroid induction in the gram-negative bacterium Comamonas testosteroni.	Oppermann UC, Belai I, Maser E	J Steroid Biochem Mol Biol	10.1016/0960-0760(96)00021-0	1996
Metabolism	A novel sulfatase from Pseudomonas testosteroni hydrolyzing lithocholic acid sulfate.	Tazuke Y, Matsuda K, Okada S, Tsukada Y	Biosci Biotechnol Biochem	10.1271/bbb.56.1584	1992
Enzymology	Affinity chromatography of 3 alpha-hydroxysteroid dehydrogenase from Pseudomonas testosteroni. Use of N,N-dimethylformamide to prevent hydrophobic interactions between the enzyme and the ligand.	Aukrust LE, Norum KR, Skalhegg BA	Biochim Biophys Acta	10.1016/0005-2744(76)90219-9	1976
Enzymology	Specificity of oxidation of bile-salt hydroxyl groups by crude extracts of Pseudomonas testosteroni (ATCC 11996) used in determining bile salts.	Beher WT, Lin GJ	Clin Chem		1975
Enzymology	Purification and properties of malate dehydrogenase from Pseudomonas testosteroni.	You KS, Kaplan NO	J Bacteriol	10.1128/jb.123.2.704-716.1975	1975
Enzymology	3Alpha-hydroxysteroid dehydrogenase from Pseudomonas testosteroni: kinetic properties with NAD and its thionicotinamide analogue.	Skalhegg BA	Eur J Biochem	10.1111/j.1432-1033.1975.tb09901.x	1975
Enzymology	On the 3alpha-hydroxysteroid dehydrogenase from Pseudomonas testosteroni. The effect of denaturing agents.	Skalhegg BA	Int J Pept Protein Res	10.1111/j.1399-3011.1975.tb02449.x	1975
Enzymology	Characterization of a 3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase from the gram-negative bacterium Comamonas testosteroni.	Oppermann UC, Maser E	Eur J Biochem	10.1111/j.1432-1033.1996.00744.x	1996
Genetics	Genomic and taxonomic characterization of the Comamonas sp. nov., a bacterium isolated from Brazilian Cerrado soil.	Frederico TD, Cunha-Ferreira IC, Vizzotto CS, de Sousa JF, Portugal MM, Totola MR, Kruger RH, Peixoto J.	Braz J Microbiol	10.1007/s42770-024-01566-w	2025
Enzymology	Comamonas resistens sp. nov. and Pseudomonas triclosanedens sp. nov., two members of the phylum Pseudomonadota isolated from the wastewater treatment system of a pharmaceutical factory.	Yin Y, Han J, Wu H, Lu Y, Bao X, Lu Z.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006222	2024
Phylogeny	Comamonas granuli sp. nov., isolated from granules used in a wastewater treatment plant.	Kim KH, Ten LN, Liu QM, Im WT, Lee ST.	J Microbiol	10.1007/s12275-008-0019-0	2008
Phylogeny	Bordetella holmesii sp. nov., a new gram-negative species associated with septicemia.	Weyant RS, Hollis DG, Weaver RE, Amin MF, Steigerwalt AG, O'Connor SP, Whitney AM, Daneshvar MI, Moss CW, Brenner DJ.	J Clin Microbiol	10.1128/jcm.33.1.1-7.1995	1995
Enzymology	Candidatus Kaistella beijingensis sp. nov., Isolated from a Municipal Wastewater Treatment Plant, Is Involved in Sludge Foaming.	Song Y, Jiang CY, Liang ZL, Zhu HZ, Jiang Y, Yin Y, Qin YL, Huang HJ, Wang BJ, Wei ZY, Cheng RX, Liu ZP, Liu Y, Jin T, Wang AJ, Liu SJ.	Appl Environ Microbiol	10.1128/aem.01534-21	2021
Metabolism	Characterization of Comamonas thiooxidans sp. nov., and comparison of thiosulfate oxidation with Comamonas testosteroni and Comamonas composti.	Narayan KD, Pandey SK, Das SK.	Curr Microbiol	10.1007/s00284-010-9602-9	2010
Metabolism	Herbaspirillum chlorophenolicum sp. nov., a 4-chlorophenol-degrading bacterium.	Im WT, Bae HS, Yokota A, Lee ST.	Int J Syst Evol Microbiol	10.1099/ijs.0.02812-0	2004
Phylogeny	Comamonas koreensis sp. nov., a non-motile species from wetland in Woopo, Korea.	Chang YH, Han JI, Chun J, Lee KC, Rhee MS, Kim YB, Bae KS.	Int J Syst Evol Microbiol	10.1099/00207713-52-2-377	2002
Metabolism	Microvirgula aerodenitrificans gen. nov., sp. nov., a new gram-negative bacterium exhibiting co-respiration of oxygen and nitrogen oxides up to oxygen-saturated conditions.	Patureau D, Godon JJ, Dabert P, Bouchez T, Bernet N, Delgenes JP, Moletta R.	Int J Syst Bacteriol	10.1099/00207713-48-3-775	1998
Phylogeny	Characterization of unusual bacteria isolated from respiratory secretions of cystic fibrosis patients and description of Inquilinus limosus gen. nov., sp. nov.	Coenye T, Goris J, Spilker T, Vandamme P, LiPuma JJ.	J Clin Microbiol	10.1128/jcm.40.6.2062-2069.2002	2002
Metabolism	Telluria mixta (Pseudomonas mixta Bowman, Sly, and Hayward 1988) gen. nov., comb. nov., and Telluria chitinolytica sp. nov., soil-dwelling organisms which actively degrade polysaccharides.	Bowman JP, Sly LI, Hayward AC, Spiegel Y, Stackebrandt E.	Int J Syst Bacteriol	10.1099/00207713-43-1-120	1993
Phylogeny	Laribacter hongkongensis gen. nov., sp. nov., a novel gram-negative bacterium isolated from a cirrhotic patient with bacteremia and empyema.	Yuen KY, Woo PC, Teng JL, Leung KW, Wong MK, Lau SK.	J Clin Microbiol	10.1128/jcm.39.12.4227-4232.2001	2001
Phylogeny	Thermicanus aegyptius gen. nov., sp. nov., isolated from oxic soil, a fermentative microaerophile that grows commensally with the thermophilic acetogen Moorella thermoacetica.	Gossner AS, Devereux R, Ohnemuller N, Acker G, Stackebrandt E, Drake HL.	Appl Environ Microbiol	10.1128/aem.65.11.5124-5133.1999	1999
Phylogeny	Comamonas fluminis sp. nov., isolated from the Han River, Republic of Korea.	Park EH, Kim YS, Cha CJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.005287	2022
Phylogeny	Description of Comamonas serinivorans sp. nov., isolated from wheat straw compost.	Zhu D, Xie C, Huang Y, Sun J, Zhang W	Int J Syst Evol Microbiol	10.1099/ijs.0.066688-0	2014
Phylogeny	Comamonas guangdongensis sp. nov., isolated from subterranean forest sediment, and emended description of the genus Comamonas.	Zhang J, Wang Y, Zhou S, Wu C, He J, Li F	Int J Syst Evol Microbiol	10.1099/ijs.0.040188-0	2012
Phylogeny	Comamonas composti sp. nov., isolated from food waste compost.	Young CC, Chou JH, Arun AB, Yen WS, Sheu SY, Shen FT, Lai WA, Rekha PD, Chen WM	Int J Syst Evol Microbiol	10.1099/ijs.0.65277-0	2008
Phylogeny	Comamonas odontotermitis sp. nov., isolated from the gut of the termite Odontotermes formosanus.	Chou JH, Sheu SY, Lin KY, Chen WM, Arun AB, Young CC	Int J Syst Evol Microbiol	10.1099/ijs.0.64551-0	2007

References

#12682	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 50244
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#37573	; Curators of the CIP;
#44373	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 1426
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123485	Collection of Institut Pasteur ; Curators of the CIP; CIP 59.24
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Comamonas testosteroni (DSM 50244, ATCC 11996, ICPB 2741-78)

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Morphology

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