Acidovorax cattleyae (DSM 17101, ATCC 33619, CFBP 2423)

Name: Acidovorax cattleyae (DSM 17101, ATCC 33619, CFBP 2423)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2902

Type strain

Culture col. no. DSM 17101 ATCC 33619 CFBP 2423 ICMP 2826 ICPB PC21 9 more

NCBI tax ID(s) 80868

Special Collections DSMZ CCUG CIP JMRC

History DSMZ <- ICPB <- D. W. Dye; NL1 <- NCPPB <- P.A. Ark CIP <- 2000, CCUG <- 1988, LMG <- 1992, N. Logan, Caledonian Univ., Glasgow, UK "Bacillus marrocanus" <- 1978, DSMZ <- J. Ottow <- B. Delaporte <- A. Sasson

Links

Acidovorax cattleyae DSM 17101 is an obligate aerobe, Gram-negative, motile plant pathogen of the family Comamonadaceae.

Gram-negative motile rod-shaped obligate aerobe plant pathogen genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 117

LMG 2364,ATCC 33619,ICMP 2826,LMG 5286,NCPPB 961,NRRL B-835,PDDCC 2826,CCUG 21975,CIP 106435,DSM 17101,BCRC 13202,CCRC 13202,CFBP 2423,KACC 10650

@ref 20215

Last LPSN update 2026-05-29 08:25:34

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Comamonadaceae

Genus Acidovorax

Species Acidovorax cattleyae

Full scientific name Acidovorax cattleyae (Pavarino 1911) Schaad et al. 2009

Synonyms (4)

Pseudomonas cattleyae
Paracidovorax cattleyae
"Bacterium cattleyae"
Acidovorax avenae subsp. cattleyae

BacDive ID	Other strains from **Acidovorax cattleyae** (2)	Type strain
128720	A. cattleyae SF008546,
157281	A. cattleyae IMI 359520

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
116659	negative	rod-shaped
125438	negative			98

Pigmentation

@ref	Production	Name
116659		Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6760	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
38626	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
116659	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
6760	positive	growth	28
38626	positive	growth	30
47531	positive	growth	28
116659	positive	growth	25-37
116659	negative	growth	5
116659	negative	growth	10
116659	negative	growth	41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
116659	obligate aerobe
125439	obligate aerobe	96.5

Spore formation

@ref	Spore formation	Confidence
125439		98.15

Halophily

@ref	Salt	Growth	Tested relation	Concentration
116659	NaCl	positive	growth	0-2 %
116659	NaCl		growth	4 %
116659	NaCl		growth	6 %
116659	NaCl		growth	8 %
116659	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
116659	16947 ChEBI	citrate	+	carbon source
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
116659	4853 ChEBI	esculin	-	hydrolysis
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
116659	17632 ChEBI	nitrate	+	reduction
116659	17632 ChEBI	nitrate	-	respiration
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
116659	16301 ChEBI	nitrite	-	reduction
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	+	hydrolysis	from API 20NE

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
116659	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
116659	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
116659	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
116659	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
116659	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
116659	caseinase	+	3.4.21.50
116659	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
116659	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
116659	gelatinase	-
68369	gelatinase	-		from API 20NE
116659	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
116659	lipase	-
68382	lipase (C 14)	-		from API zym
116659	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
116659	ornithine decarboxylase	-	4.1.1.17
116659	oxidase	-
116659	protease	-
68382	trypsin	-	3.4.21.4	from API zym
116659	tryptophan deaminase	-
116659	tween esterase	+
116659	urease	+	3.5.1.5
68369	urease	+	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
116659	-	+	+	+	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
6760	-	-	-	+	+	-	-	-	-	+	-	+	-	-	+	-	+	+	-	-	+
6760	-	-	-	-	+	-	-	-	-	+	-	+	-	-	+	-	-	+	-	-	+
6760	-	-	-	-	+	-	-	-	-	+	-	+	-	-	+	-	-	+	-	-	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
116659	not determinedn.d.	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	+	-	-	-	-	+	-	+	-	-	+	-	-	-	-	-	-	-	-	-	+	-	+	+	-	-	-	-	+	-	-	-	+	-	+	-	+	-	+	+	-	-	-	-	-	-	-	+	-	+	-	-	-	+	+	+	-	-	+	-	-	-	+	+	+	+	+	+	+	-	+	+	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent	Isolation date	Sampling date
38626		Morocco	MAR	Africa
47531						1950
116659	Environment, Warm arid soil	Morocco	MAR	Africa	1950

Taxonmaps

69479

Global distribution of 16S sequence AF078762 (>99% sequence identity) for Acidovorax from Microbeatlas

Aquatic Samples	12286
Soil Samples	16355
Animal Samples	6685
Plant Samples	10427
Total Samples	45753

Interaction and safety

Risk assessment

@ref	Pathogenicity plant	Biosafety level	Biosafety level comment
6760		1	Risk group (German classification) According to TRBA 466
116659		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	IMG-taxon 2634166355 annotated assembly for Paracidovorax cattleyae DSM 17101	scaffold	GCA_900104515	80868.3	2634166355	80868	59.78
124043	ASM4268140v1 assembly for Paracidovorax cattleyae ICMP 2826	scaffold	GCA_042681405			80868	54.99

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Acidovorax cattleyae strain NCPPB 961 16S ribosomal RNA gene, partial sequence	AF078762	1514	80868
20218	Acidovorax cattleyae strain ICMP 2826 16S ribosomal RNA gene, partial sequence	GU339087	1491	80868
20218	Acidovorax cattleyae strain ICMP 2826 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	GU339094	897	80868
6760	Acidovorax cattleyae strain ICMP 2826 16S ribosomal RNA gene, partial sequence	AF137504	1481	80868
124043	Acidovorax cattleyae strain FC362 16S ribosomal RNA gene, partial sequence.	KJ210355	1416	80868
124043	Acidovorax cattleyae strain ICMP 2826 16S ribosomal RNA gene, partial sequence.	MT758036	1358	80868
124043	Acidovorax cattleyae strain ICMP 2826 16S ribosomal RNA gene, partial sequence.	MT759991	1358	80868
124043	Acidovorax avenae subsp. cattleyae strain CIP 106435 16S ribosomal RNA gene, partial sequence.	EU024135	1314	80868

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: IMG-taxon 2634166355 annotated assembly for Paracidovorax cattleyae DSM 17101
BV-BRC: 80868.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.50	no
125439	gram_stain	BacteriaNetⓘ	negative	85.61	no
125439	motility	BacteriaNetⓘ	yes	72.12	no
125439	spore_formation	BacteriaNetⓘ	no	98.15	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Acidovorax cattleyae DSM 17101
NCBI: GCA_900104515.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.00	no
125438	anaerobic	anaerobicⓘ	no	97.27	yes
125438	aerobic	aerobicⓘ	yes	89.64	yes
125438	spore-forming	spore-formingⓘ	no	86.86	no
125438	thermophilic	thermophileⓘ	no	96.44	no
125438	flagellated	motile2+ⓘ	yes	83.92	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Specific detection of Pectobacterium carotovorum by loop-mediated isothermal amplification.	Yasuhara-Bell J, Marrero G, De Silva A, Alvarez AM.	Mol Plant Pathol	10.1111/mpp.12378	2016
	Characterization of four Acidovorax phages and their potential in phage biocontrol for lamb's lettuce seed decontamination.	Holtappels D, Vieira FG, Voet M, Vallino M, Van Vaerenbergh J, Lavigne R, Wagemans J.	Microbiol Spectr	10.1128/spectrum.00993-24	2024

References

#6760	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17101
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#38626	; Curators of the CIP;
#47531	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 21975
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116659	Collection of Institut Pasteur ; Curators of the CIP; CIP 106435
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Acidovorax cattleyae (DSM 17101, ATCC 33619, CFBP 2423)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API 20NE

API biotype100

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900104515

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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