Acidovorax konjaci (DSM 7481, ATCC 33996, CCUG 17394)

Name: Acidovorax konjaci (DSM 7481, ATCC 33996, CCUG 17394)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2893

Type strain

Strain Designation K2

Culture col. no. DSM 7481 ATCC 33996 CCUG 17394 ICMP 7733 LMG 5691 5 more

NCBI tax ID(s) 32040

Special Collections DSMZ CCUG JCM CIP

History DSMZ <- ATCC <- M. Goto; K2 JCM <-- M. Goto strain K2. CIP <- 2000, CCUG <- 1985, LMG, Pseudomonas pseudoalcaligenes konjaci <- 1983, PDDC: strain 7733 <- M. Goto: strain K2

Links

Acidovorax konjaci K2 is an obligate aerobe, Gram-negative, motile plant pathogen that was isolated from Amorphophallus rivieri cv. konjaci.

Gram-negative motile rod-shaped obligate aerobe plant pathogen genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 140

LMG 5691,ATCC 33996,ICMP 7733,JCM 2397,PDDCC 7733,CCUG 17394,CIP 106439,DSM 7481,NCPPB 3698,KACC 10652,CFBP 4460

@ref 20215

Last LPSN update 2026-05-29 08:25:34

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Comamonadaceae

Genus Acidovorax

Species Acidovorax konjaci

Full scientific name Acidovorax konjaci (Goto 1983) Willems et al. 1992

Synonyms (3)

Pseudomonas avenae subsp. konjaci
Paracidovorax konjaci
Pseudomonas pseudoalcaligenes subsp. konjaci

BacDive ID	Other strains from **Acidovorax konjaci** (3)	Type strain
157287	A. konjaci IMI 359863
163267	A. konjaci JCM 2398
163268	A. konjaci JCM 2399

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
120463	negative	rod-shaped
125438	negative		98.5
125439	negative		95.791

Pigmentation

@ref	Production	Name
120463		Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
3180	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
39525	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
120463	CIP Medium 3	Medium recipe at CIP
120463	CIP Medium 35	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
3180	positive	growth	28
39525	positive	growth	30
67770	positive	growth	28
120463	positive	growth	25-37
120463	negative	growth	5
120463	negative	growth	10
120463	negative	growth	41

Physiology and metabolism

Oxygen tolerance

120463

Oxygen toleranceobligate aerobe

Spore formation

@ref	Spore formation	Confidence
125439		99.469

Halophily

@ref	Salt	Growth	Tested relation	Concentration
120463	NaCl	positive	growth	2 %
120463	NaCl		growth	4 %
120463	NaCl		growth	6 %
120463	NaCl		growth	8 %
120463	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	+	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
120463	16947 ChEBI	citrate	-	carbon source
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
120463	4853 ChEBI	esculin	-	hydrolysis
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	+	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
120463	17632 ChEBI	nitrate	+	reduction
120463	17632 ChEBI	nitrate	-	respiration
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
120463	16301 ChEBI	nitrite	-	reduction
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
120463	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
120463	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
120463	alcohol dehydrogenase	-	1.1.1.1
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
120463	amylase	-
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
120463	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120463	caseinase	-	3.4.21.50
120463	catalase	+	1.11.1.6
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
120463	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
120463	gelatinase	-
68369	gelatinase	-		from API 20NE
120463	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
120463	lipase	-
68382	lipase (C 14)	-		from API zym
120463	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
120463	ornithine decarboxylase	-	4.1.1.17
120463	oxidase	+
120463	protease	-
68382	trypsin	-	3.4.21.4	from API zym
120463	tryptophan deaminase	-
120463	tween esterase	-
120463	urease	+	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
46608	-	-	+	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-
120463	-	+	+	+	-	+	-	+	-	-	+	-	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
46608	+	-	-	-	-	-	-	-	+	+	+	+	+	+	+	+	+	+	+	-	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
120463	not determinedn.d.	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	+	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	+	-	-	+	+	+	+	-	-	-	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	+	-	-	+	+	+	+	-	-	-	-	-	+	+	+	+	+	+	+	+	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Herbaceous plants (Grass,Crops)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Sampling date	Isolation date
3180	Amorphophallus rivieri cv. konjaci	Amorphophallus rivieri	Shizuoka	Japan	JPN	Asia
46608	Amorphophallus rivieri cv. Konjac	Amorphophallus rivieri cv. Konjac		Japan	JPN	Asia	1977
67770	Amorphophalus rivieri cv. Konjac	Amorphophalus rivieri
120463	Amorphophallus rivieri cv. Konjac	Amorphophallus rivieri cv. Konjac		Japan	JPN	Asia		1977

Taxonmaps

69479

Global distribution of 16S sequence AF078760 (>99% sequence identity) for Acidovorax konjaci from Microbeatlas

Aquatic Samples	153
Soil Samples	195
Animal Samples	30
Plant Samples	565
Total Samples	943

Interaction and safety

Risk assessment

@ref	Pathogenicity plant	Biosafety level	Biosafety level comment
3180		1	Risk group (German classification) According to TRBA 466
120463		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2634166315 annotated assembly for Paracidovorax konjaci DSM 7481	scaffold	GCA_900112675	32040.4	2634166315	32040	70.61

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Acidovorax konjaci 16S ribosomal RNA gene, partial sequence	AF078760	1513	32040
20218	Acidovorax konjaci 16S rRNA gene, strain DSM 7481	AJ420325	1490	32040
20218	Acidovorax konjaci 16S ribosomal RNA gene, partial sequence	AF137507	1481	32040
20218	Acidovorax konjaci strain ICMP 7733 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	GU339095	871	32040
124043	Acidovorax konjaci strain FC321 16S ribosomal RNA gene, partial sequence.	KJ210357	1409	32040

GC content

@ref	GC-content (mol%)	Method
3180	68.4	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: IMG-taxon 2634166315 annotated assembly for Paracidovorax konjaci DSM 7481
NCBI: GCA_900112675

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	71.96	no
125439	gram_stain	BacteriaNetⓘ	negative	95.79	no
125439	motility	BacteriaNetⓘ	yes	80.03	no
125439	spore_formation	BacteriaNetⓘ	no	99.47	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Acidovorax konjaci strain DSM 7481
PATRIC: 32040.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.50	no
125438	anaerobic	anaerobicⓘ	no	97.12	yes
125438	spore-forming	spore-formingⓘ	no	87.51	no
125438	aerobic	aerobicⓘ	yes	89.26	no
125438	thermophilic	thermophileⓘ	no	96.37	yes
125438	flagellated	motile2+ⓘ	yes	80.38	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	A persistent and diverse airway microbiota present during chronic obstructive pulmonary disease exacerbations.	Huang YJ, Kim E, Cox MJ, Brodie EL, Brown R, Wiener-Kronish JP, Lynch SV.	OMICS	10.1089/omi.2009.0100	2010
Phylogeny	Acidovorax lacteus sp. nov., isolated from a culture of a bloom-forming cyanobacterium (Microcystis sp.).	Chun SJ, Cui Y, Ko SR, Lee HG, Srivastava A, Oh HM, Ahn CY	Antonie Van Leeuwenhoek	10.1007/s10482-017-0892-9	2017

References

#3180	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7481
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#39525	; Curators of the CIP;
#46608	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 17394
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#120463	Collection of Institut Pasteur ; Curators of the CIP; CIP 106439
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Acidovorax konjaci (DSM 7481, ATCC 33996, CCUG 17394)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API 20NE

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900112675

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media