Acidovorax temperans (DSM 7270, ATCC 49665, CCUG 11779)

Name: Acidovorax temperans (DSM 7270, ATCC 49665, CCUG 11779)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2892

Type strain

Culture col. no. DSM 7270 ATCC 49665 CCUG 11779 LMG 7169 CIP 103457 1 more

NCBI tax ID(s) 80878

Special Collections DSMZ CCUG CIP

History <- CCUG CIP <- 1991, CCUG <- 1981, PHL, Göteborg, Sweden

Links

Acidovorax temperans DSM 7270 is an obligate aerobe, Gram-negative, rod-shaped bacterium that was isolated from human urine.

Gram-negative rod-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 152

LMG 7169,CCUG 11779,ATCC 49665,CCUG 29362,DSM 7270,CCM 4562,CIP 103457,CFBP 3610

@ref 20215

Last LPSN update 2026-02-09 11:18:22

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Comamonadaceae

Genus Acidovorax

Species Acidovorax temperans

Full scientific name Acidovorax temperans Willems et al. 1990

BacDive ID	Other strains from **Acidovorax temperans** (32)	Type strain
138352	A. temperans CIP 106440, CCUG 10556, LMG 6437
139232	A. temperans CIP 103456, CCUG 22192, LMG 8451
141480	A. temperans CCUG 2168 B, LMG 6435
141612	A. temperans CCUG 3688 A, LMG 7163
141616	A. temperans CCUG 3746 A, LMG 7164
141984	A. temperans CCUG 9443 A, LMG 6436
143056	A. temperans CCUG 16573, LMG 6438
143087	A. temperans CCUG 17140, LMG 6439
143198	A. temperans CCUG 17727 A, LMG 6730
143303	A. temperans CCUG 18335
143305	A. temperans CCUG 18338
143306	A. temperans CCUG 18350, LMG 8915
143368	A. temperans CCUG 18750, LMG 7379
143888	A. temperans CCUG 21716, CIP 471.74, LMG 3334
143889	A. temperans CCUG 21717, CIP 239.74, LMG 3332
144220	A. temperans CCUG 23689, LMG 8768
144434	A. temperans CCUG 24954, LMG 9083
144435	A. temperans CCUG 24955, LMG 9084
144437	A. temperans CCUG 24957, LMG 9370
146286	A. temperans CCUG 30812
150952	A. temperans CCUG 42837
151219	A. temperans CCUG 43487
153494	A. temperans CCUG 49751
154275	A. temperans CCUG 52951
154489	A. temperans CCUG 53823
155136	A. temperans CCUG 56561
156037	A. temperans CCUG 60147
156324	A. temperans CCUG 61165
174179	A. temperans CIMB 05-0118, CRBIP17.2
174856	A. temperans Dres_AcidovTemp_01, DSM 101576
174857	A. temperans Dres_AcidovTemp_02, DSM 103761
174858	A. temperans Dres_AcidovTemp_03, DSM 109093

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
123441	negative	rod-shaped
125438	negative		98.5
125439	negative		99.5

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
3087	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
40235	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
123441	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
3087	positive	growth	28
40235	positive	growth	25
123441	positive	growth	25-41
123441	negative	growth	5
123441	negative	growth	10

Physiology and metabolism

Oxygen tolerance

123441

Oxygen toleranceobligate aerobe

Spore formation

@ref	Spore formation	Confidence
125438		90.315
125439		99.3

Halophily

@ref	Salt	Growth	Tested relation	Concentration
123441	NaCl	positive	growth	0 %
123441	NaCl		growth	2 %
123441	NaCl		growth	4 %
123441	NaCl		growth	6 %
123441	NaCl		growth	8 %
123441	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
123441	16947 ChEBI	citrate	-	carbon source
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
123441	4853 ChEBI	esculin	-	hydrolysis
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
123441	17632 ChEBI	nitrate	+	reduction
123441	17632 ChEBI	nitrate	+	respiration
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
123441	16301 ChEBI	nitrite	+	reduction
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
123441	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
123441	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
123441	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
123441	amylase	-
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
123441	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
123441	caseinase	-	3.4.21.50
123441	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
123441	DNase	-
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	+		from API zym
123441	gelatinase	-
68369	gelatinase	-		from API 20NE
123441	lecithinase	+
68382	leucine arylamidase	+	3.4.11.1	from API zym
123441	lipase	+
68382	lipase (C 14)	-		from API zym
123441	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
123441	ornithine decarboxylase	-	4.1.1.17
123441	oxidase	+
123441	protease	+
68382	trypsin	-	3.4.21.4	from API zym
123441	tryptophan deaminase	-
123441	tween esterase	+
123441	urease	-	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	adipate degradation	100	2 of 2
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	cyanate degradation	100	3 of 3
66794	formaldehyde oxidation	100	3 of 3
66794	L-lactaldehyde degradation	100	3 of 3
66794	palmitate biosynthesis	100	22 of 22
66794	coenzyme A metabolism	100	4 of 4
66794	ppGpp biosynthesis	100	4 of 4
66794	denitrification	100	2 of 2
66794	methylglyoxal degradation	100	5 of 5
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	suberin monomers biosynthesis	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	valine metabolism	100	9 of 9
66794	Entner Doudoroff pathway	90	9 of 10
66794	threonine metabolism	90	9 of 10
66794	NAD metabolism	88.89	16 of 18
66794	chorismate metabolism	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	molybdenum cofactor biosynthesis	88.89	8 of 9
66794	gluconeogenesis	87.5	7 of 8
66794	reductive acetyl coenzyme A pathway	85.71	6 of 7
66794	photosynthesis	85.71	12 of 14
66794	ubiquinone biosynthesis	85.71	6 of 7
66794	propanol degradation	85.71	6 of 7
66794	vitamin B1 metabolism	84.62	11 of 13
66794	3-chlorocatechol degradation	80	4 of 5
66794	propionate fermentation	80	8 of 10
66794	flavin biosynthesis	80	12 of 15
66794	peptidoglycan biosynthesis	80	12 of 15
66794	ethylmalonyl-CoA pathway	80	4 of 5
66794	phenylacetate degradation (aerobic)	80	4 of 5
66794	gallate degradation	80	4 of 5
66794	glutamate and glutamine metabolism	78.57	22 of 28
66794	heme metabolism	78.57	11 of 14
66794	citric acid cycle	78.57	11 of 14
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	lipid A biosynthesis	77.78	7 of 9
66794	purine metabolism	77.66	73 of 94
66794	phenylalanine metabolism	76.92	10 of 13
66794	leucine metabolism	76.92	10 of 13
66794	vitamin B12 metabolism	76.47	26 of 34
66794	CMP-KDO biosynthesis	75	3 of 4
66794	butanoate fermentation	75	3 of 4
66794	lactate fermentation	75	3 of 4
66794	isoleucine metabolism	75	6 of 8
66794	sulfopterin metabolism	75	3 of 4
66794	C4 and CAM-carbon fixation	75	6 of 8
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	tryptophan metabolism	73.68	28 of 38
66794	3-phenylpropionate degradation	73.33	11 of 15
66794	pentose phosphate pathway	72.73	8 of 11
66794	proline metabolism	72.73	8 of 11
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	glutathione metabolism	71.43	10 of 14
66794	tetrahydrofolate metabolism	71.43	10 of 14
66794	methionine metabolism	69.23	18 of 26
66794	lysine metabolism	69.05	29 of 42
66794	non-pathway related	68.42	26 of 38
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	octane oxidation	66.67	2 of 3
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	glycolysis	64.71	11 of 17
66794	lipid metabolism	64.52	20 of 31
66794	pyrimidine metabolism	64.44	29 of 45
66794	tyrosine metabolism	64.29	9 of 14
66794	oxidative phosphorylation	63.74	58 of 91
66794	vitamin B6 metabolism	63.64	7 of 11
66794	arginine metabolism	62.5	15 of 24
66794	ketogluconate metabolism	62.5	5 of 8
66794	alanine metabolism	62.07	18 of 29
66794	urea cycle	61.54	8 of 13
66794	lipoate biosynthesis	60	3 of 5
66794	phenol degradation	60	12 of 20
66794	histidine metabolism	58.62	17 of 29
66794	degradation of sugar alcohols	56.25	9 of 16
66794	d-mannose degradation	55.56	5 of 9
66794	cysteine metabolism	55.56	10 of 18
66794	isoprenoid biosynthesis	53.85	14 of 26
66794	pantothenate biosynthesis	50	3 of 6
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	toluene degradation	50	2 of 4
66794	ribulose monophosphate pathway	50	1 of 2
66794	ethanol fermentation	50	1 of 2
66794	glycine metabolism	50	5 of 10
66794	glycogen biosynthesis	50	2 of 4
66794	biotin biosynthesis	50	2 of 4
66794	vitamin E metabolism	50	2 of 4
66794	selenocysteine biosynthesis	50	3 of 6
66794	phenylmercury acetate degradation	50	1 of 2
66794	degradation of aromatic, nitrogen containing compounds	50	6 of 12
66794	acetate fermentation	50	2 of 4
66794	quinate degradation	50	1 of 2
66794	metabolism of disaccharids	45.45	5 of 11
66794	d-xylose degradation	45.45	5 of 11
66794	ascorbate metabolism	45.45	10 of 22
66794	4-hydroxymandelate degradation	44.44	4 of 9
66794	allantoin degradation	44.44	4 of 9
66794	nitrate assimilation	44.44	4 of 9
66794	glycine betaine biosynthesis	40	2 of 5
66794	degradation of sugar acids	40	10 of 25
66794	vitamin K metabolism	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	factor 420 biosynthesis	40	2 of 5
66794	hydrogen production	40	2 of 5
66794	glycogen metabolism	40	2 of 5
66794	degradation of hexoses	38.89	7 of 18
66794	sulfate reduction	38.46	5 of 13
66794	androgen and estrogen metabolism	37.5	6 of 16
66794	carotenoid biosynthesis	36.36	8 of 22
66794	sphingosine metabolism	33.33	2 of 6
66794	enterobactin biosynthesis	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	degradation of pentoses	32.14	9 of 28
66794	4-hydroxyphenylacetate degradation	30	3 of 10
66794	coenzyme M biosynthesis	30	3 of 10
66794	bile acid biosynthesis, neutral pathway	29.41	5 of 17
66794	arachidonic acid metabolism	27.78	5 of 18
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	carnitine metabolism	25	2 of 8
66794	cyclohexanol degradation	25	1 of 4
66794	polyamine pathway	21.74	5 of 23

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
123441	-	+	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
3087	+	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	+	-	-	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
123441	not determinedn.d.	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	+	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	+	-	+	-	-	-	+	+	-	+	-	-	-	+	-	+	+	+	+	-	+	-	-	-	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Fluids	#Urine

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
3087	human urine	Göteborg	Sweden	SWE	Europe
123441	Human, Urine	Göterborg	Sweden	SWE	Europe	1981

Taxonmaps

69479

Global distribution of 16S sequence AF078766 (>99% sequence identity) for Acidovorax from Microbeatlas

Aquatic Samples	166
Soil Samples	20
Animal Samples	170
Plant Samples	25
Total Samples	381

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
3087	yes, in single cases	1	Risk group (German classification) According to TRBA 466
123441		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM671690v1 assembly for Acidovorax temperans DSM 7270	contig	GCA_006716905	80878.16	2818991434	80878	77.13

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Acidovorax temperans 16S ribosomal RNA gene, partial sequence	AF078766	1512		80878

GC content

@ref	GC-content (mol%)	Method
3087	62.4	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Acidovorax temperans DSM 7270
NCBI: GCA_006716905

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.30	no
125439	motility	BacteriaNetⓘ	yes	84.60	no
125439	gram_stain	BacteriaNetⓘ	negative	99.50	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	78.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Acidovorax temperans strain DSM 7270
PATRIC: 80878.16

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.50	no
125438	anaerobic	anaerobicⓘ	no	95.88	yes
125438	aerobic	aerobicⓘ	yes	83.26	no
125438	spore-forming	spore-formingⓘ	no	90.32	no
125438	thermophilic	thermophileⓘ	no	97.16	no
125438	flagellated	motile2+ⓘ	yes	81.64	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Complete genome sequence of Acidovorax temperans strain LMJ isolated from a contaminated Chlamydomonas reinhardtii Tris-Acetate-Phosphate medium culture plate.	Mitra M, Stanescu A.	Microbiol Resour Announc	10.1128/mra.01293-23	2024
Genetics	Discovery of Antimicrobial Phosphonopeptide Natural Products from Bacillus velezensis by Genome Mining.	Wilson J, Cui J, Nakao T, Kwok H, Zhang Y, Kayrouz CM, Pham TM, Roodhouse H, Ju KS.	Appl Environ Microbiol	10.1128/aem.00338-23	2023
	Uptake of carbamazepine by rhizomes and endophytic bacteria of Phragmites australis.	Sauvetre A, Schroder P.	Front Plant Sci	10.3389/fpls.2015.00083	2015
Enzymology	Reversing and controlling microbial proliferation in the water system of a high-risk hospital ward after extended closure and reconstruction.	Chaput DL, Clarkson K, Bagrade L, Marek A, Kelly D, Watson D, Steele T, Leanord A.	Water Res	10.1016/j.watres.2025.123748	2025
	Algal organic matter triggers re-assembly of bacterial community in plumbing system.	Liu X, Zhang H, Pei T, Huang T, Ma B, Wang T, Liu X, Ma W.	J Hazard Mater	10.1016/j.jhazmat.2024.136713	2025
	Tropheryma whipplei and Giardia intestinalis Co-Infection: Metagenomic Analysis During Infection and the Recovery Follow-Up.	Anselmo A, Rizzo F, Gervasi E, Corrent L, Ciammaruconi A, Fillo S, Fortunato A, Marella AM, Costantini S, Baldassari L, Lista F, Ciervo A.	Infect Dis Rep	10.3390/idr17030062	2025
	Bacterial communities associated with Acrobeles complexus nematodes recovered from tomato crops in South Africa.	Shokoohi E, Machado RAR, Masoko P.	PLoS One	10.1371/journal.pone.0304663	2024
	Acidovorax temperans skews neutrophil maturation and polarizes Th17 cells to promote lung adenocarcinoma development.	Stone JK, von Muhlinen N, Zhang C, Robles AI, Flis AL, Vega-Valle E, Miyanaga A, Matsumoto M, Greathouse KL, Cooks T, Trinchieri G, Harris CC.	Oncogenesis	10.1038/s41389-024-00513-6	2024
Genetics	Effect of rainfall on metagenomics in a sewage environment in Hongta District, Yuxi city, Yunnan Province.	Jia S, Gu W, Jiang L, Zhang Y, Fu X, Yin J, Zhou Y.	PeerJ	10.7717/peerj.20199	2025
Genetics	Bacterial Communities and Resistance and Virulence Genes in Hospital and Community Wastewater: Metagenomic Analysis.	Velazquez-Meza ME, Galarde-Lopez M, Cornejo-Juarez P, Bobadilla-Del-Valle M, Godoy-Lozano E, Aguilar-Vera E, Carrillo-Quiroz BA, Ponce de Leon-Garduno A, Velazquez Acosta C, Alpuche-Aranda CM.	Int J Mol Sci	10.3390/ijms26052051	2025
	The effect of transportation vibration on the microbiological status of bottled mineral water.	Tihanyi-Kovacs R, Borocz P, Asvanyi B.	J Sci Food Agric	10.1002/jsfa.11787	2023
	Colorectal cancer-specific microbiome in peripheral circulation and cancer tissues.	Yan S, Liu T, Zhao H, Zhao C, Zhu Y, Dai W, Sun W, Wang H, Sun J, Zhao L, Xu D.	Front Microbiol	10.3389/fmicb.2024.1422536	2024
	Multidrug-Resistant Uropathogens Causing Community Acquired Urinary Tract Infections among Patients Attending Health Facilities in Mwanza and Dar es Salaam, Tanzania.	Silago V, Moremi N, Mtebe M, Komba E, Masoud S, Mgaya FX, Mirambo MM, Nyawale HA, Mshana SE, Matee MI.	Antibiotics (Basel)	10.3390/antibiotics11121718	2022
Pathogenicity	Metagenomic Analysis Reveals Variations in Gut Microbiomes of the Schistosoma mansoni-Transmitting Snails Biomphalaria straminea and Biomphalaria glabrata.	Li P, Hong J, Wu M, Yuan Z, Li D, Wu Z, Sun X, Lin D.	Microorganisms	10.3390/microorganisms11102419	2023
	The genetic toolbox for Acidovorax temperans.	Boycheva SS, Pichler FB, Heijstra BD, Lau KE, Turner SJ.	J Microbiol Methods	10.1016/j.mimet.2015.06.006	2015
Phylogeny	Nanopore Sequencing Assessment of Bacterial Pathogens and Associated Antibiotic Resistance Genes in Environmental Samples.	Lobiuc A, Paval NE, Dimian M, Covasa M.	Microorganisms	10.3390/microorganisms11122834	2023
	The respiratory microbiome associated with chronic obstructive pulmonary disease comorbidity in non-small cell lung cancer.	Shimizu M, Miyanaga A, Seike M, Matsuda K, Matsumoto M, Noro R, Fujita K, Mano Y, Furuya N, Kubota K, Gemma A.	Thorac Cancer	10.1111/1759-7714.14463	2022
	Characterization of four Acidovorax phages and their potential in phage biocontrol for lamb's lettuce seed decontamination.	Holtappels D, Vieira FG, Voet M, Vallino M, Van Vaerenbergh J, Lavigne R, Wagemans J.	Microbiol Spectr	10.1128/spectrum.00993-24	2024
Metabolism	Triggers of aggregation and extracellular polysaccharide polymer production in Acidovorax temperans.	Clark Ehlers GA, Turner SJ.	Curr Microbiol	10.1007/s00284-013-0309-6	2013
	Scrub sink contamination and transmission to operating room personnel.	Ta C, Wong G, Cole W, Medvedev G.	New Microbes New Infect	10.1016/j.nmni.2020.100754	2020
Metabolism	Decrease of NH4+-N by bacterioplankton accelerated the removal of cyanobacterial blooms in aerated aquatic ecosystem.	Yang X, Xie P, Ma Z, Wang Q, Fan H, Shen H.	J Environ Sci (China)	10.1016/s1001-0742(12)60282-4	2013
	Microbiota Biomarkers for Lung Cancer.	Leng Q, Holden VK, Deepak J, Todd NW, Jiang F.	Diagnostics (Basel)	10.3390/diagnostics11030407	2021
Enzymology	Bacterial contamination of blood products for transfusion in the Democratic Republic of the Congo: temperature monitoring, qualitative and semi-quantitative culture.	Heroes AS, Ndalingosu N, Kalema J, Luyindula A, Kashitu D, Akele C, Kabinda J, Lagrou K, Vandekerckhove P, Jacobs J, Lunguya O.	Blood Transfus	10.2450/2020.0108-20	2020
Phylogeny	Species-Level Characterization of the Microbiome in Breast Tissues with Different Malignancy and Hormone-Receptor Statuses Using Nanopore Sequencing.	Luo L, Fu A, Shi M, Hu J, Kong D, Liu T, Yuan J, Sun S, Chen C.	J Pers Med	10.3390/jpm13020174	2023
	A laboratory ice machine as a cold oligotrophic artificial microbial niche for biodiscovery.	Satari L, Torrent D, Ortega-Legarreta A, Latorre-Perez A, Pascual J, Porcar M, Iglesias A.	Sci Rep	10.1038/s41598-023-49017-0	2023
Metabolism	Extracellular DNA and Type IV pili mediate surface attachment by Acidovorax temperans.	Heijstra BD, Pichler FB, Liang Q, Blaza RG, Turner SJ.	Antonie Van Leeuwenhoek	10.1007/s10482-009-9320-0	2009
Pathogenicity	Bacteria in the amniotic fluid without inflammation: early colonization vs. contamination.	Jung E, Romero R, Yoon BH, Theis KR, Gudicha DW, Tarca AL, Diaz-Primera R, Winters AD, Gomez-Lopez N, Yeo L, Hsu CD.	J Perinat Med	10.1515/jpm-2021-0191	2021
	Impact of the Lung Microbiota on Development and Progression of Lung Cancer.	Belaid A, Romeo B, Rignol G, Benzaquen J, Audoin T, Vouret-Craviari V, Brest P, Varraso R, von Bergen M, Hugo Marquette C, Leroy S, Mograbi B, Hofman P.	Cancers (Basel)	10.3390/cancers16193342	2024
Phylogeny	Characterization of phosphobacteria isolated from eutrophic aquatic ecosystems.	Wu G, Liu J, Ye Z.	Mikrobiologiia	10.1134/s0026261709060149	2009
	Catch me if you can: capturing microbial community transformation by extracellular DNA using Hi-C sequencing.	Calderon-Franco D, van Loosdrecht MCM, Abeel T, Weissbrodt DG.	Antonie Van Leeuwenhoek	10.1007/s10482-023-01834-z	2023
Pathogenicity	Chronic exposure to polycyclic aromatic hydrocarbons alters skin virome composition and virus-host interactions.	Du S, Tong X, Leung MHY, Betts RJ, Woo AC, Bastien P, Misra N, Aguilar L, Clavaud C, Lee PKH.	ISME J	10.1093/ismejo/wrae218	2024
	An evaluation of microbial and chemical contamination sources related to the deterioration of tap water quality in the household water supply system.	Lee Y.	Int J Environ Res Public Health	10.3390/ijerph10094143	2013
Pathogenicity	Shotgun metagenomic sequencing analysis of ocular surface microbiome in Singapore residents with mild dry eye.	Tong L, Constancias F, Hou A, Chua SL, Drautz-Moses DI, Schuster SC, Yang L, Williams RBH, Kjelleberg S.	Front Med (Lausanne)	10.3389/fmed.2022.1034131	2022
	Comprehensive human amniotic fluid metagenomics supports the sterile womb hypothesis.	Wang H, Yang GX, Hu Y, Lam P, Sangha K, Siciliano D, Swenerton A, Miller R, Tilley P, Von Dadelszen P, Kalyan S, Tang P, Patel MS.	Sci Rep	10.1038/s41598-022-10869-7	2022
Genetics	Metagenomics: An Approach for Unraveling the Community Structure and Functional Potential of Activated Sludge of a Common Effluent Treatment Plant.	Vasudeva G, Singh H, Paliwal S, Pinnaka AK.	Front Microbiol	10.3389/fmicb.2022.933373	2022
	Diurnal and eating-associated microbial patterns revealed via high-frequency saliva sampling.	Hu Y, Amir A, Huang X, Li Y, Huang S, Wolfe E, Weiss S, Knight R, Xu ZZ.	Genome Res	10.1101/gr.276482.121	2022
	Alkylation or Silylation for Analysis of Amino and Non-Amino Organic Acids by GC-MS?	Villas-Boas SG, Smart KF, Sivakumaran S, Lane GA.	Metabolites	10.3390/metabo1010003	2011
	Community of thermoacidophilic and arsenic resistant microorganisms isolated from a deep profile of mine heaps.	Casas-Flores S, Gomez-Rodriguez EY, Garcia-Meza JV.	AMB Express	10.1186/s13568-015-0132-5	2015
Phylogeny	Comparison of Bacterial DNA Profiles in Mid-Trimester Amniotic Fluid Samples From Preterm and Term Deliveries.	Stinson L, Hallingstrom M, Barman M, Viklund F, Keelan J, Kacerovsky M, Payne M, Jacobsson B.	Front Microbiol	10.3389/fmicb.2020.00415	2020
Genetics	Microbiome Analysis for Wastewater Surveillance during COVID-19.	Brumfield KD, Leddy M, Usmani M, Cotruvo JA, Tien CT, Dorsey S, Graubics K, Fanelli B, Zhou I, Registe N, Dadlani M, Wimalarante M, Jinasena D, Abayagunawardena R, Withanachchi C, Huq A, Jutla A, Colwell RR.	mBio	10.1128/mbio.00591-22	2022
	Thermal Impact on the Culturable Microbial Diversity Along the Processing Chain of Flour From Crickets (Acheta domesticus).	Frohling A, Bussler S, Durek J, Schluter OK.	Front Microbiol	10.3389/fmicb.2020.00884	2020
Phylogeny	Evidence supportive of a bacterial component in the etiology for Alzheimer's disease and for a temporal-spatial development of a pathogenic microbiome in the brain.	Mone Y, Earl JP, Krol JE, Ahmed A, Sen B, Ehrlich GD, Lapides JR.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1123228	2023
	Gene expression networks in the Drosophila Genetic Reference Panel.	Everett LJ, Huang W, Zhou S, Carbone MA, Lyman RF, Arya GH, Geisz MS, Ma J, Morgante F, St Armour G, Turlapati L, Anholt RRH, Mackay TFC.	Genome Res	10.1101/gr.257592.119	2020
	Surface physicochemistry and ionic strength affects eDNA's role in bacterial adhesion to abiotic surfaces.	Regina VR, Lokanathan AR, Modrzynski JJ, Sutherland DS, Meyer RL.	PLoS One	10.1371/journal.pone.0105033	2014
Metabolism	The Arabidopsis MIK2 receptor elicits immunity by sensing a conserved signature from phytocytokines and microbes.	Hou S, Liu D, Huang S, Luo D, Liu Z, Xiang Q, Wang P, Mu R, Han Z, Chen S, Chai J, Shan L, He P.	Nat Commun	10.1038/s41467-021-25580-w	2021
	Complete Assembly of the Genome of an Acidovorax citrulli Strain Reveals a Naturally Occurring Plasmid in This Species.	Yang R, Santos Garcia D, Perez Montano F, da Silva GM, Zhao M, Jimenez Guerrero I, Rosenberg T, Chen G, Plaschkes I, Morin S, Walcott R, Burdman S.	Front Microbiol	10.3389/fmicb.2019.01400	2019
Enzymology	Assessing the Groundwater Quality at a Saudi Arabian Agricultural Site and the Occurrence of Opportunistic Pathogens on Irrigated Food Produce.	Alsalah D, Al-Jassim N, Timraz K, Hong PY.	Int J Environ Res Public Health	10.3390/ijerph121012391	2015
Pathogenicity	Molecular analysis of arsenate-reducing bacteria within Cambodian sediments following amendment with acetate.	Lear G, Song B, Gault AG, Polya DA, Lloyd JR.	Appl Environ Microbiol	10.1128/aem.01654-06	2007
Enzymology	Seasonal dynamics of bacterioplankton community structure in a eutrophic lake as determined by 5S rRNA analysis.	Hofle MG, Haas H, Dominik K.	Appl Environ Microbiol	10.1128/aem.65.7.3164-3174.1999	1999
Genetics	Acidovorax bellezanensis sp. nov., a novel bacterium from uranium mill tailings repository sites with selenium bioremediation capabilities.	Sanchez-Castro I, Viver T, Martinez-Rodriguez P, Bustos-Caparros E, Ruiz-Fresneda MA, Mena-Sanabria MT, Jimenez-Garcia I, Bosch-Estevez G, Descostes M, Merroun ML.	Heliyon	10.1016/j.heliyon.2024.e33171	2024
Phylogeny	Acidovorax kalamii sp. nov., isolated from a water sample of the river Ganges.	Pal D, Kaur N, Sudan SK, Bisht B, Krishnamurthi S, Mayilraj S	Int J Syst Evol Microbiol	10.1099/ijsem.0.002736	2018
Phylogeny	Acidovorax, a new genus for Pseudomonas facilis, Pseudomonas delafieldii, E. Falsen (EF) group 13, EF group 16, and several clinical isolates, with the species Acidovorax facilis comb. nov., Acidovorax delafieldii comb. nov., and Acidovorax temperans sp. nov.	Willems A, Falsen E, Pot B, Jantzen E, Hoste B, Vandamme P, Gillis M, Kersters K, De Ley J	Int J Syst Bacteriol	10.1099/00207713-40-4-384	1990

References

#3087	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7270
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#40235	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123441	Collection of Institut Pasteur ; Curators of the CIP; CIP 103457
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Acidovorax temperans (DSM 7270, ATCC 49665, CCUG 11779)

Name and taxonomic classification

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