Acidovorax facilis | Type strain | DSM 649, ATCC 11228, CCUG 2113, LMG 6221, LMG 2193, CCM 4561

Strain identifier

BacDive ID: 2888

Type strain:

Species: Acidovorax facilis

Culture col. no.: DSM 649, ATCC 11228, CCUG 2113, LMG 6221, LMG 2193, CCM 4561

Strain history: <- ATCC <- A. Schatz (Hydrogenomonas facilis)

Section

Name and taxonomic classification
Culture and growth conditions
Physiology and metabolism
Isolation, sampling and environmental information
Safety information
Sequence information

External links

Acidovorax facilis DSM 649 is a mesophilic bacterium of the family Comamonadaceae.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	23-11-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Proteobacteria
	Class	Betaproteobacteria
	Order	Burkholderiales
	Family	Comamonadaceae
	Genus	Acidovorax
	Species	Acidovorax facilis
	Full Scientific Name (PNU)	Acidovorax facilis (Schatz and Bovell 1952) Willems et al. 1990

	Synonym	Hydrogenomonas facilis
	Synonym	Pseudomonas facilis

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #347]

Culture medium

MINERAL MEDIUM FOR CHEMOLITHOTROPHIC GROWTH (H-3) (DSMZ Medium 81)

[Ref.: #347]

Culture medium growth

[Ref.: #347]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #347]

Culture medium

Nutrient agar (NA)

[Ref.: #347]

Culture medium growth

[Ref.: #347]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #40593]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #40593]

Culture medium growth

[Ref.: #40593]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #347]	growth	30 ̊C
[Ref.: #40593]	growth	25 ̊C
[Ref.: #44487]	growth	30 ̊C

[Ref.: #347]	Temperature range	mesophilic
[Ref.: #40593]	Temperature range	mesophilic
[Ref.: #44487]	Temperature range	mesophilic

Information on physiology and metabolismPhysiology and metabolism

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #44487]

Fatty acid	Percentage	ECL
C16:1 ω7c	44.5	15.819
C16:0	27.3	16
C18:1 ω7c /12t/9t	12.4	17.824
C14:0	4.9	14
C12:0	4.7	12
C10:0 3OH	4	11.423
C18:2 ω6,9c/C18:0 ANTE	1.3	17.724
C8:0 3OH	0.9	9.385

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #44487]	3728	-	+	+	+	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #44487]	7385	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #44487]	Sample type/isolated from	Lawn soil
[Ref.: #44487]	Country	USA
[Ref.: #44487]	Country ISO 3 Code	USA
[Ref.: #44487]	Continent	North America

[Ref.: #40593]	Country	USA
[Ref.: #40593]	Country ISO 3 Code	USA
[Ref.: #40593]	Continent	North America

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Engineered	#Agriculture	#Garden
#Engineered	#Built environment	-
#Environmental	#Terrestrial	#Grassland

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsSafety information

[Ref.: #347]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassSequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Acidovorax facilis strain FC-208 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	DQ360425	622	ENA	12917 tax ID	*
[Ref.: #20218]	Acidovorax facilis 16S ribosomal RNA gene, partial sequence	AF078765	1511	ENA	12917 tax ID	*
[Ref.: #20218]	Acidovorax facilis 16S rRNA gene, strain DSM 649	AJ420324	1311	ENA	12917 tax ID	*
[Ref.: #20218]	P.facilis 16S rRNA	X59169	158	ENA	12917 tax ID	*
[Ref.: #20218]	Acidovorax facilis strain LMG 2193 16S ribosomal RNA gene, partial sequence	EU024133	1318	ENA	12917 tax ID	*

Availability in culture collectionsExternal links

[Ref.: #347]

Culture collection no.

DSM 649, ATCC 11228, CCUG 2113, LMG 6221, LMG 2193, CCM 4561

[Ref.: #20218]

Associated Passport(s) in StrainInfo

899, 896

References

#347	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 649

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#40593 ; Curators of the CIP;
#44487 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 2113
* These References are textmined

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Acidovorax facilis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF