Acetivibrio clariflavus EBR-02E-0045 is an anaerobe, chemoorganotroph, spore-forming bacterium that forms circular colonies and was isolated from methanogenic sludge of a cellulose-degrading bioreactor.
spore-forming Gram-variable rod-shaped colony-forming anaerobe chemoorganotroph genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Bacillota |
| Class Clostridia |
| Order Eubacteriales |
| Family Oscillospiraceae |
| Genus Acetivibrio |
| Species Acetivibrio clariflavus |
| Full scientific name Acetivibrio clariflavus (Shiratori et al. 2009) Tindall 2019 |
| Synonyms (2) |
| @ref | Colony size | Colony color | Colony shape | Medium used | |
|---|---|---|---|---|---|
| 25435 | 1-2 mm | bright yellow | circular | Solid agar containing cellulose or cellobiose as a carbon source |
| 29002 | Productionyes |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8129 | RUMINOCLOSTRIDIUM CELLULOLYTICUM (CM3) MEDIUM (DSMZ Medium 520) | Medium recipe at MediaDive | Name: RUMINOCLOSTRIDIUM CELLULOLYTICUM (CM3) MEDIUM (DSMZ Medium 520) Composition: Cellulose 9.97009 g/l (optional) Cellobiose 5.98205 g/l K2HPO4 x 3 H2O 2.89133 g/l Yeast extract 1.99402 g/l Na2CO3 1.49551 g/l KH2PO4 1.49551 g/l (NH4)2SO4 1.29611 g/l L-Cysteine HCl x H2O 0.498504 g/l MgCl2 x 6 H2O 0.199402 g/l CaCl2 x 2 H2O 0.0747757 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l FeSO4 x 7 H2O 0.00124626 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l H3BO3 5.98205e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Distilled water | ||
| 25435 | Solid agar containing cellulose or cellobiose as a carbon source |
| 25435 | Typechemoorganotroph |
| 25435 | Observationnon-motile, although retarded peritrichious flagella are present |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 25435 | 27613 ChEBI | amygdalin | - | assimilation | |
| 25435 | 22599 ChEBI | arabinose | - | assimilation | |
| 25435 | casein | - | hydrolysis | ||
| 29002 | 17057 ChEBI | cellobiose | + | carbon source | |
| 25435 | 17057 ChEBI | cellobiose | + | carbon source | |
| 25435 | 17057 ChEBI | cellobiose | + | energy source | |
| 25435 | 62968 ChEBI | cellulose | + | carbon source | |
| 25435 | 62968 ChEBI | cellulose | + | energy source | |
| 25435 | 17113 ChEBI | erythritol | - | assimilation | |
| 29002 | 4853 ChEBI | esculin | + | hydrolysis | |
| 25435 | 4853 ChEBI | esculin | + | hydrolysis | |
| 25435 | 28757 ChEBI | fructose | - | assimilation | |
| 25435 | 16813 ChEBI | galactitol | - | assimilation | |
| 25435 | 28260 ChEBI | galactose | - | assimilation | |
| 25435 | 5291 ChEBI | gelatin | - | hydrolysis | |
| 25435 | 17234 ChEBI | glucose | - | assimilation | |
| 25435 | 17754 ChEBI | glycerol | - | assimilation | |
| 25435 | 28087 ChEBI | glycogen | - | assimilation | |
| 25435 | 15443 ChEBI | inulin | - | assimilation | |
| 25435 | 17716 ChEBI | lactose | - | assimilation | |
| 25435 | 17306 ChEBI | maltose | - | assimilation | |
| 25435 | 29864 ChEBI | mannitol | - | assimilation | |
| 25435 | 37684 ChEBI | mannose | - | assimilation | |
| 25435 | 6731 ChEBI | melezitose | - | assimilation | |
| 25435 | 28053 ChEBI | melibiose | - | assimilation | |
| 25435 | 17268 ChEBI | myo-inositol | - | assimilation | |
| 25435 | 17632 ChEBI | nitrate | - | reduction | |
| 25435 | 16634 ChEBI | raffinose | - | assimilation | |
| 25435 | 26546 ChEBI | rhamnose | - | assimilation | |
| 25435 | 15963 ChEBI | ribitol | - | assimilation | |
| 25435 | 33942 ChEBI | ribose | - | assimilation | |
| 25435 | 17814 ChEBI | salicin | - | assimilation | |
| 25435 | 30911 ChEBI | sorbitol | - | assimilation | |
| 25435 | 27922 ChEBI | sorbose | - | assimilation | |
| 25435 | 28017 ChEBI | starch | - | hydrolysis | |
| 25435 | 17992 ChEBI | sucrose | - | assimilation | |
| 25435 | 16189 ChEBI | sulfate | - | reduction | |
| 25435 | 27082 ChEBI | trehalose | - | assimilation | |
| 25435 | 17151 ChEBI | xylitol | - | assimilation | |
| 25435 | 18222 ChEBI | xylose | - | assimilation |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | cellulose degradation | 100 | 5 of 5 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | glycogen metabolism | 100 | 5 of 5 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | L-lactaldehyde degradation | 100 | 3 of 3 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | vitamin B1 metabolism | 92.31 | 12 of 13 | ||
| 66794 | aspartate and asparagine metabolism | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | tetrahydrofolate metabolism | 85.71 | 12 of 14 | ||
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | ||
| 66794 | vitamin B12 metabolism | 85.29 | 29 of 34 | ||
| 66794 | NAD metabolism | 83.33 | 15 of 18 | ||
| 66794 | starch degradation | 80 | 8 of 10 | ||
| 66794 | hydrogen production | 80 | 4 of 5 | ||
| 66794 | pyrimidine metabolism | 80 | 36 of 45 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | flavin biosynthesis | 80 | 12 of 15 | ||
| 66794 | threonine metabolism | 80 | 8 of 10 | ||
| 66794 | glycine betaine biosynthesis | 80 | 4 of 5 | ||
| 66794 | serine metabolism | 77.78 | 7 of 9 | ||
| 66794 | d-mannose degradation | 77.78 | 7 of 9 | ||
| 66794 | valine metabolism | 77.78 | 7 of 9 | ||
| 66794 | phenylalanine metabolism | 76.92 | 10 of 13 | ||
| 66794 | C4 and CAM-carbon fixation | 75 | 6 of 8 | ||
| 66794 | acetate fermentation | 75 | 3 of 4 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | ppGpp biosynthesis | 75 | 3 of 4 | ||
| 66794 | sulfopterin metabolism | 75 | 3 of 4 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | heme metabolism | 71.43 | 10 of 14 | ||
| 66794 | glycolysis | 70.59 | 12 of 17 | ||
| 66794 | purine metabolism | 70.21 | 66 of 94 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | CO2 fixation in Crenarchaeota | 66.67 | 6 of 9 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | formaldehyde oxidation | 66.67 | 2 of 3 | ||
| 66794 | methionine metabolism | 65.38 | 17 of 26 | ||
| 66794 | glutamate and glutamine metabolism | 64.29 | 18 of 28 | ||
| 66794 | vitamin B6 metabolism | 63.64 | 7 of 11 | ||
| 66794 | d-xylose degradation | 63.64 | 7 of 11 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | ketogluconate metabolism | 62.5 | 5 of 8 | ||
| 66794 | dTDPLrhamnose biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | gluconeogenesis | 62.5 | 5 of 8 | ||
| 66794 | sulfate reduction | 61.54 | 8 of 13 | ||
| 66794 | oxidative phosphorylation | 60.44 | 55 of 91 | ||
| 66794 | factor 420 biosynthesis | 60 | 3 of 5 | ||
| 66794 | propanol degradation | 57.14 | 4 of 7 | ||
| 66794 | ubiquinone biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | glutathione metabolism | 57.14 | 8 of 14 | ||
| 66794 | non-pathway related | 55.26 | 21 of 38 | ||
| 66794 | tryptophan metabolism | 55.26 | 21 of 38 | ||
| 66794 | histidine metabolism | 55.17 | 16 of 29 | ||
| 66794 | proline metabolism | 54.55 | 6 of 11 | ||
| 66794 | arginine metabolism | 54.17 | 13 of 24 | ||
| 66794 | alanine metabolism | 51.72 | 15 of 29 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | CMP-KDO biosynthesis | 50 | 2 of 4 | ||
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | ||
| 66794 | aminopropanol phosphate biosynthesis | 50 | 1 of 2 | ||
| 66794 | myo-inositol biosynthesis | 50 | 5 of 10 | ||
| 66794 | Entner Doudoroff pathway | 50 | 5 of 10 | ||
| 66794 | propionate fermentation | 50 | 5 of 10 | ||
| 66794 | selenocysteine biosynthesis | 50 | 3 of 6 | ||
| 66794 | biotin biosynthesis | 50 | 2 of 4 | ||
| 66794 | citric acid cycle | 50 | 7 of 14 | ||
| 66794 | butanoate fermentation | 50 | 2 of 4 | ||
| 66794 | quinate degradation | 50 | 1 of 2 | ||
| 66794 | adipate degradation | 50 | 1 of 2 | ||
| 66794 | cysteine metabolism | 50 | 9 of 18 | ||
| 66794 | lipid metabolism | 48.39 | 15 of 31 | ||
| 66794 | leucine metabolism | 46.15 | 6 of 13 | ||
| 66794 | isoprenoid biosynthesis | 46.15 | 12 of 26 | ||
| 66794 | urea cycle | 46.15 | 6 of 13 | ||
| 66794 | nitrate assimilation | 44.44 | 4 of 9 | ||
| 66794 | degradation of pentoses | 42.86 | 12 of 28 | ||
| 66794 | lysine metabolism | 42.86 | 18 of 42 | ||
| 66794 | metabolism of amino sugars and derivatives | 40 | 2 of 5 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | lipoate biosynthesis | 40 | 2 of 5 | ||
| 66794 | methylglyoxal degradation | 40 | 2 of 5 | ||
| 66794 | degradation of hexoses | 38.89 | 7 of 18 | ||
| 66794 | phenylpropanoid biosynthesis | 38.46 | 5 of 13 | ||
| 66794 | degradation of sugar alcohols | 37.5 | 6 of 16 | ||
| 66794 | ascorbate metabolism | 36.36 | 8 of 22 | ||
| 66794 | tyrosine metabolism | 35.71 | 5 of 14 | ||
| 66794 | polyamine pathway | 34.78 | 8 of 23 | ||
| 66794 | cyanate degradation | 33.33 | 1 of 3 | ||
| 66794 | glycolate and glyoxylate degradation | 33.33 | 2 of 6 | ||
| 66794 | pantothenate biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | 3-phenylpropionate degradation | 33.33 | 5 of 15 | ||
| 66794 | lipid A biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | methane metabolism | 33.33 | 1 of 3 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | molybdenum cofactor biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 33.33 | 4 of 12 | ||
| 66794 | glycine metabolism | 30 | 3 of 10 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 30 | 3 of 10 | ||
| 66794 | coenzyme M biosynthesis | 30 | 3 of 10 | ||
| 66794 | degradation of sugar acids | 28 | 7 of 25 | ||
| 66794 | arachidonic acid metabolism | 27.78 | 5 of 18 | ||
| 66794 | metabolism of disaccharids | 27.27 | 3 of 11 | ||
| 66794 | pentose phosphate pathway | 27.27 | 3 of 11 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | phenol degradation | 25 | 5 of 20 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | carnitine metabolism | 25 | 2 of 8 | ||
| 66794 | methanogenesis from CO2 | 25 | 3 of 12 | ||
| 66794 | androgen and estrogen metabolism | 25 | 4 of 16 | ||
| 66794 | chlorophyll metabolism | 22.22 | 4 of 18 | ||
| 66794 | 4-hydroxymandelate degradation | 22.22 | 2 of 9 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Engineered | #Biodegradation | - | |
| #Engineered | #Bioreactor | - | |
| #Environmental | #Terrestrial | #Mud (Sludge) | |
| #Condition | #Anoxic (anaerobic) | - |
| @ref | Sample type | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|
| 8129 | methanogenic sludge of a cellulose-degrading bioreactor | Japan | JPN | Asia |
Global distribution of 16S sequence AB186359 (>99% sequence identity) for Acetivibrio clariflavus subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM23708v1 assembly for Acetivibrio clariflavus DSM 19732 | complete | 720554 | 97.13 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 8129 | Clostridium clariflavum gene for 16S rRNA | AB186359 | 1560 | 720554 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | yes | 89.50 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 80.50 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 70.40 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | anaerobe | 93.90 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 57.36 | no |
| 125438 | anaerobic | anaerobicⓘ | yes | 93.64 | yes |
| 125438 | aerobic | aerobicⓘ | no | 96.49 | yes |
| 125438 | spore-forming | spore-formingⓘ | yes | 75.74 | no |
| 125438 | thermophilic | thermophileⓘ | yes | 62.76 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 78.48 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Cellulolytic and hemicellulolytic capacity of Acetivibrio clariflavus. | Suchova K, Puchart V. | Appl Microbiol Biotechnol | 10.1007/s00253-025-13471-9 | 2025 | ||
| Discovery and Biosynthesis of Celluxanthenes, Antibacterial Arylpolyene Alkaloids From Diverse Cellulose-Degrading Anaerobic Bacteria. | Ishida K, Krabbe J, Meisinger PR, Shabuer G, Schieferdecker S, Cyrulies M, Tank C, Barnes E, Paetz C, Hertweck C. | Angew Chem Int Ed Engl | 10.1002/anie.202503697 | 2025 | ||
| Thermophilic site-specific recombination system for rapid insertion of heterologous DNA into the Clostridium thermocellum chromosome. | Ashok N, Kaygusuz Y, Schindel HS, Thurmon S, Eckert CA, Guss AM. | J Ind Microbiol Biotechnol | 10.1093/jimb/kuaf023 | 2024 | ||
| Characterization of Two alpha-l-Arabinofuranosidases from Acetivibrio mesophilus and Their Synergistic Effect in Degradation of Arabinose-Containing Substrates. | Liu Y, Vanderhaeghen S, Feiler W, Angelov A, Baudrexl M, Zverlov V, Liebl W. | Microorganisms | 10.3390/microorganisms9071467 | 2021 | ||
| Microbiome-mediated fructose depletion restricts murine gut colonization by vancomycin-resistant Enterococcus. | Isaac S, Flor-Duro A, Carruana G, Puchades-Carrasco L, Quirant A, Lopez-Nogueroles M, Pineda-Lucena A, Garcia-Garcera M, Ubeda C. | Nat Commun | 10.1038/s41467-022-35380-5 | 2022 | ||
| Metabolism | A novel bacterial GH30 xylobiohydrolase from Hungateiclostridium clariflavum. | Suchova K, Puchart V, Biely P | Appl Microbiol Biotechnol | 10.1007/s00253-020-11023-x | 2020 | |
| Enzymology | Highly thermostable GH51 alpha-arabinofuranosidase from Hungateiclostridium clariflavum DSM 19732. | Geng A, Wu J, Xie R, Wang H, Wu Y, Li X, Chang F, Sun J | Appl Microbiol Biotechnol | 10.1007/s00253-019-09753-8 | 2019 | |
| Phylogeny | Comparative Biochemical Analysis of Cellulosomes Isolated from Clostridium clariflavum DSM 19732 and Clostridium thermocellum ATCC 27405 Grown on Plant Biomass. | Shinoda S, Kurosaki M, Kokuzawa T, Hirano K, Takano H, Ueda K, Haruki M, Hirano N | Appl Biochem Biotechnol | 10.1007/s12010-018-2864-6 | 2018 | |
| Enzymology | Exploration of the key functional proteins from an efficient cellulolytic microbial consortium using dilution-to-extinction approach. | Zhang Q, Li H, Zhu X, Lai F, Zhai Z, Wang Y | J Environ Sci (China) | 10.1016/j.jes.2015.09.003 | 2015 | |
| Metabolism | Integration of bacterial expansin-like proteins into cellulosome promotes the cellulose degradation. | Chen C, Cui Z, Song X, Liu YJ, Cui Q, Feng Y | Appl Microbiol Biotechnol | 10.1007/s00253-015-7071-6 | 2015 | |
| Comparative analysis of the ability of Clostridium clariflavum strains and Clostridium thermocellum to utilize hemicellulose and unpretreated plant material. | Izquierdo JA, Pattathil S, Guseva A, Hahn MG, Lynd LR | Biotechnol Biofuels | 10.1186/s13068-014-0136-4 | 2014 | ||
| Metabolism | Exploration of the key microbes involved in the cellulolytic activity of a microbial consortium by serial dilution. | Zhang Q, Tian M, Tang L, Li H, Li W, Zhang J, Zhang H, Mao Z | Bioresour Technol | 10.1016/j.biortech.2012.11.097 | 2012 | |
| Genetics | Complete Genome Sequence of Clostridium clariflavum DSM 19732. | Izquierdo JA, Goodwin L, Davenport KW, Teshima H, Bruce D, Detter C, Tapia R, Han S, Land M, Hauser L, Jeffries CD, Han J, Pitluck S, Nolan M, Chen A, Huntemann M, Mavromatis K, Mikhailova N, Liolios K, Woyke T, Lynd LR | Stand Genomic Sci | 10.4056/sigs.2535732 | 2012 | |
| Phylogeny | Clostridium clariflavum sp. nov. and Clostridium caenicola sp. nov., moderately thermophilic, cellulose-/cellobiose-digesting bacteria isolated from methanogenic sludge. | Shiratori H, Sasaya K, Ohiwa H, Ikeno H, Ayame S, Kataoka N, Miya A, Beppu T, Ueda K | Int J Syst Evol Microbiol | 10.1099/ijs.0.003483-0 | 2009 |
| #8129 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19732 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #25435 | IJSEM 1764 2009 ( DOI 10.1099/ijs.0.003483-0 , PubMed 19542130 ) |
| #29002 | Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25435 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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