Enterocloster lavalensis (DSM 19851, CCUG 54291, JCM 14986)

Name: Enterocloster lavalensis (DSM 19851, CCUG 54291, JCM 14986)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2849

Type strain

Strain Designation CCRI-9842

Culture col. no. DSM 19851 CCUG 54291 JCM 14986 NML 03-A-015 CIP 109511 2 more

NCBI tax ID(s) 460384

Special Collections DSMZ CCUG JCM KCTC CIP Literature strains

History DSMZ <- M.-C. Domingo, Centre de recherche en infectiologie, Québec, Canada; CCRI-9842 <- A. Bernal; {2001} JCM <-- CCUG 54291 <-- M.-C. Domingo and M. G. Bergeron CCRI-9842 <-- A. Bernal. CIP <- 2007, CCUG <- CHUL Bergeron, Quebec, Canada: strain CCRI-9842

Links

Enterocloster lavalensis CCRI-9842 is an anaerobe, spore-forming, Gram-positive bacterium that was isolated from human faeces, rectal swab.

spore-forming Gram-positive motile rod-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 361149

KCTC 15153,CCUG 54291,JCM 14986,DSM 19851,CIP 109511

@ref 20215

Last LPSN update 2026-05-29 08:25:34

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Lachnospiraceae

Genus Enterocloster

Species Enterocloster lavalensis

Full scientific name Enterocloster lavalensis (Domingo et al. 2009) Haas and Blanchard 2020

Synonyms (1)

Clostridium lavalense

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
28932	positive	2.5-6.0 µm	0.8-1.5 µm	rod-shaped
120574	positive			rod-shaped

Colony morphology

60125

Incubation period2 days

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8290	BHI MEDIUM FOR STRICT ANAEROBES (DSMZ Medium 215c)	Medium recipe at MediaDive	Name: BHI MEDIUM FOR STRICT ANAEROBES (DSMZ Medium 215c; with strain-specific modifications) Composition: Brain heart infusion 37.0 g/l Na2S x 9 H2O 0.25 g/l L-Cysteine HCl x H2O 0.25 g/l Haemin Distilled water
37748	MEDIUM 20 - for Anaerobic bacteria		Agar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml)
120574	CIP Medium 20	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
8290	positive	growth	35
28932	positive	growth	35-37
28932	positive	optimum	36
37748	positive	growth	37
60125	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
8290	anaerobe
28932	anaerobe
60125	anaerobe
120574	anaerobe
125439	anaerobe	98.08

Spore formation

28932

Spore formationyes

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
28932	22599 ChEBI	arabinose	+	carbon source
28932	28757 ChEBI	fructose	+	carbon source
28932	28260 ChEBI	galactose	+	carbon source
28932	17234 ChEBI	glucose	+	carbon source
28932	17716 ChEBI	lactose	+	carbon source
28932	17306 ChEBI	maltose	+	carbon source
28932	37684 ChEBI	mannose	+	carbon source
28932	17632 ChEBI	nitrate	+	reduction
120574	17632 ChEBI	nitrate	-	reduction
120574	16301 ChEBI	nitrite	-	reduction
28932	33942 ChEBI	ribose	+	carbon source
28932	17814 ChEBI	salicin	+	carbon source
28932	30911 ChEBI	sorbitol	+	carbon source
28932	17992 ChEBI	sucrose	+	carbon source
28932	27082 ChEBI	trehalose	+	carbon source
28932	18222 ChEBI	xylose	+	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite	Production
28932	35581 ChEBI	indole
120574	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
28932	35581 ChEBI	indole	+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120574	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68382	leucine arylamidase	-	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
120574	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
120574	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120574	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Patient	#Swab
#Host	#Human	-
#Host Body-Site	#Gastrointestinal tract	#Rectum
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

Isolation

@ref	Sample type	Host species	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
8290	human faeces, rectal swab	Homo sapiens		Québec, Québec city	Canada	CAN	North America
60125	Human feces	Homo sapiens	2001-10-01	Québec	Canada	CAN	North America
67770	Human feces	Homo sapiens		Québec	Canada	CAN	North America
120574	Human, Feces	Homo sapiens		Quebec	Canada	CAN	North America

Taxonmaps

69479

Global distribution of 16S sequence EF564277 (>99% sequence identity) for Enterocloster from Microbeatlas

Aquatic Samples	422
Soil Samples	86
Animal Samples	43046
Plant Samples	93
Total Samples	43647

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8290	1	Risk group (German classification) According to TRBA 466
120574	2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
67770	ASM302465v1 assembly for Enterocloster lavalensis KCTC 15153	contig	GCA_003024655	460384.7	460384	55.33

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
8290	Clostridium lavalense strain CCRI-9842 16S ribosomal RNA gene, partial sequence	EF564277	1454		460384

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM302465v1 assembly for Enterocloster lavalensis KCTC 15153
NCBI: GCA_003024655

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	98.08	no
125439	gram_stain	BacteriaNetⓘ	positive	49.93	no
125439	motility	BacteriaNetⓘ	yes	66.51	no
125439	spore_formation	BacteriaNetⓘ	yes	62.40	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: [Clostridium] lavalense strain KCTC 15153
PATRIC: 460384.7

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	71.26	yes
125438	anaerobic	anaerobicⓘ	yes	83.13	no
125438	spore-forming	spore-formingⓘ	yes	71.84	yes
125438	aerobic	aerobicⓘ	no	94.66	yes
125438	thermophilic	thermophileⓘ	no	94.09	yes
125438	flagellated	motile2+ⓘ	no	63.02	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Clostridium lavalense sp. nov., a glycopeptide-resistant species isolated from human faeces.	Domingo MC, Huletsky A, Boissinot M, Helie MC, Bernal A, Bernard KA, Grayson ML, Picard FJ, Bergeron MG	Int J Syst Evol Microbiol	10.1099/ijs.0.001958-0	2009

References

#8290	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19851
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#25371	IJSEM 498 2009 ( DOI 10.1099/ijs.0.001958-0 , PubMed 19244429 )
#28932	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25371
#37748	; Curators of the CIP;
#60125	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 54291
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#120574	Collection of Institut Pasteur ; Curators of the CIP; CIP 109511
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Enterocloster lavalensis (DSM 19851, CCUG 54291, JCM 14986)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_003024655

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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